View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10467_low_10 (Length: 240)
Name: NF10467_low_10
Description: NF10467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10467_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 49699795 - 49699572
Alignment:
| Q |
1 |
cttaggtctttagcataatggtcggcaagaaagtagaaaatgcaggctccattatgtactacaaatagagtaacctacagtgtaaacacaagacaatgct |
100 |
Q |
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| T |
49699795 |
cttaggtctttagcataatggtcggcaagaaagtagaaaatgcaggctccattatgtactacaaatagagtaacctacagtgtaaacacaagacaatgct |
49699696 |
T |
|
| Q |
101 |
tgttataaacttattcagctccacgaggaaattaagtatgcaattaactagtaactgttgtaatagtaaatactcacacaaataaactttgaacaccgca |
200 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49699695 |
tgttataaactcattcagctccacgaggaaattaagtatgcaattaactagtaactgttgtaatagtaaatactcacacaaataaactttgaacaccgca |
49699596 |
T |
|
| Q |
201 |
accagaagtagttataatgtctat |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
49699595 |
accagaagtagttataatgtctat |
49699572 |
T |
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