View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10468_high_22 (Length: 309)

Name: NF10468_high_22
Description: NF10468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10468_high_22
NF10468_high_22
[»] chr1 (35 HSPs)
chr1 (87-292)||(44745854-44746064)
chr1 (16-130)||(34725097-34725210)
chr1 (12-128)||(38478277-38478392)
chr1 (15-128)||(35253185-35253297)
chr1 (13-133)||(46247949-46248070)
chr1 (16-128)||(19414485-19414596)
chr1 (16-130)||(12126836-12126949)
chr1 (17-111)||(4349703-4349796)
chr1 (14-130)||(31382211-31382327)
chr1 (14-127)||(45812534-45812646)
chr1 (14-130)||(47214555-47214670)
chr1 (16-133)||(27474322-27474439)
chr1 (16-130)||(14617082-14617197)
chr1 (16-130)||(30395725-30395842)
chr1 (14-130)||(18944687-18944807)
chr1 (44-130)||(32632584-32632670)
chr1 (16-133)||(35005164-35005284)
chr1 (12-130)||(46991848-46991967)
chr1 (20-111)||(10378738-10378828)
chr1 (14-69)||(50606509-50606564)
chr1 (44-130)||(23768347-23768434)
chr1 (62-111)||(34679263-34679312)
chr1 (14-130)||(45402138-45402257)
chr1 (62-130)||(6983855-6983923)
chr1 (16-130)||(10668269-10668386)
chr1 (44-108)||(15505632-15505695)
chr1 (16-130)||(20004089-20004206)
chr1 (14-130)||(23796509-23796626)
chr1 (13-130)||(27201691-27201811)
chr1 (73-111)||(4430081-4430119)
chr1 (84-133)||(22324934-22324984)
chr1 (44-128)||(11596559-11596643)
chr1 (44-130)||(18724572-18724659)
chr1 (44-130)||(41319833-41319920)
chr1 (46-106)||(20036291-20036350)
[»] scaffold0015 (1 HSPs)
scaffold0015 (16-130)||(48633-48746)
[»] chr7 (35 HSPs)
chr7 (16-130)||(21172008-21172121)
chr7 (14-130)||(32758282-32758397)
chr7 (14-130)||(42391097-42391212)
chr7 (17-132)||(48735122-48735236)
chr7 (16-130)||(31591108-31591221)
chr7 (17-130)||(10693073-10693185)
chr7 (18-130)||(42476894-42477005)
chr7 (18-115)||(11741831-11741927)
chr7 (14-130)||(34626205-34626321)
chr7 (15-133)||(42798687-42798806)
chr7 (14-130)||(19426887-19427003)
chr7 (15-130)||(27629655-27629771)
chr7 (14-111)||(7879680-7879776)
chr7 (15-130)||(42805545-42805663)
chr7 (17-130)||(2541019-2541133)
chr7 (13-97)||(27889312-27889395)
chr7 (18-130)||(11617589-11617702)
chr7 (19-130)||(35334818-35334928)
chr7 (14-130)||(43557493-43557613)
chr7 (17-130)||(47716480-47716596)
chr7 (68-130)||(2662985-2663047)
chr7 (67-130)||(23419723-23419788)
chr7 (14-133)||(19265833-19265951)
chr7 (44-130)||(38604548-38604634)
chr7 (17-111)||(22698967-22699063)
chr7 (14-130)||(47077852-47077967)
chr7 (14-130)||(1408478-1408595)
chr7 (67-130)||(48123533-48123598)
chr7 (16-128)||(40463900-40464012)
chr7 (67-111)||(14099055-14099099)
chr7 (67-111)||(14409072-14409116)
chr7 (19-111)||(18512455-18512546)
chr7 (18-133)||(18747504-18747621)
chr7 (67-135)||(23619026-23619093)
chr7 (67-130)||(33871959-33872023)
[»] chr6 (10 HSPs)
chr6 (16-130)||(1354756-1354869)
chr6 (14-130)||(1346985-1347100)
chr6 (15-130)||(25557746-25557860)
chr6 (15-130)||(26097181-26097295)
chr6 (15-130)||(29355853-29355971)
chr6 (14-130)||(9161144-9161262)
chr6 (16-133)||(12221913-12222034)
chr6 (16-130)||(28007649-28007761)
chr6 (86-130)||(23240892-23240936)
chr6 (14-69)||(12892092-12892147)
[»] chr5 (24 HSPs)
chr5 (16-130)||(32703445-32703558)
chr5 (20-130)||(7368419-7368528)
chr5 (9-130)||(35710334-35710454)
chr5 (15-130)||(8169982-8170096)
chr5 (17-112)||(34154814-34154908)
chr5 (16-130)||(41014340-41014454)
chr5 (14-130)||(24448911-24449028)
chr5 (16-130)||(38879602-38879719)
chr5 (14-69)||(16028621-16028676)
chr5 (16-130)||(4619103-4619220)
chr5 (13-96)||(1405244-1405326)
chr5 (17-130)||(13801767-13801883)
chr5 (15-130)||(43334223-43334341)
chr5 (88-130)||(37024626-37024668)
chr5 (16-93)||(16957374-16957450)
chr5 (17-126)||(16880647-16880757)
chr5 (16-116)||(22861668-22861766)
chr5 (17-69)||(30877564-30877616)
chr5 (44-130)||(19142970-19143056)
chr5 (44-111)||(43574648-43574714)
chr5 (18-130)||(20135625-20135740)
chr5 (44-128)||(2838802-2838886)
chr5 (19-64)||(11462913-11462958)
chr5 (44-127)||(7097787-7097870)
[»] chr4 (40 HSPs)
chr4 (14-127)||(11054145-11054257)
chr4 (17-130)||(20225005-20225117)
chr4 (14-130)||(47528527-47528642)
chr4 (15-130)||(48598823-48598937)
chr4 (15-127)||(9832311-9832422)
chr4 (19-122)||(29207900-29208002)
chr4 (14-130)||(16408598-16408717)
chr4 (14-130)||(30639401-30639517)
chr4 (15-130)||(5648280-5648395)
chr4 (14-130)||(20639655-20639773)
chr4 (15-127)||(54175088-54175202)
chr4 (18-130)||(6430627-6430739)
chr4 (18-130)||(8473621-8473734)
chr4 (14-130)||(39077793-39077908)
chr4 (14-130)||(47443978-47444095)
chr4 (15-130)||(25629070-25629186)
chr4 (15-128)||(10277755-10277867)
chr4 (14-125)||(23501813-23501927)
chr4 (46-130)||(17043423-17043508)
chr4 (14-69)||(38786692-38786747)
chr4 (18-130)||(40915850-40915962)
chr4 (47-130)||(5306694-5306777)
chr4 (12-133)||(35567188-35567310)
chr4 (17-128)||(20405109-20405224)
chr4 (14-69)||(32484316-32484371)
chr4 (44-130)||(49796819-49796905)
chr4 (17-108)||(20225119-20225211)
chr4 (17-110)||(55766466-55766558)
chr4 (16-133)||(14983852-14983970)
chr4 (17-127)||(44363130-44363243)
chr4 (44-130)||(7909308-7909394)
chr4 (16-128)||(16911585-16911700)
chr4 (17-111)||(30690176-30690269)
chr4 (44-127)||(51865065-51865149)
chr4 (14-67)||(35532077-35532130)
chr4 (67-131)||(55830770-55830835)
chr4 (20-130)||(21646985-21647098)
chr4 (17-69)||(38755908-38755960)
chr4 (44-132)||(39029087-39029177)
chr4 (17-69)||(40553937-40553989)
[»] chr8 (32 HSPs)
chr8 (14-130)||(12670247-12670362)
chr8 (14-130)||(30454094-30454209)
chr8 (16-130)||(36720817-36720932)
chr8 (17-130)||(17823597-17823711)
chr8 (16-111)||(12625932-12626026)
chr8 (16-131)||(19729362-19729476)
chr8 (15-130)||(28817624-28817740)
chr8 (12-130)||(35261700-35261819)
chr8 (18-130)||(45071286-45071398)
chr8 (17-128)||(13160725-13160836)
chr8 (16-133)||(44530167-44530285)
chr8 (14-130)||(6760843-6760962)
chr8 (14-130)||(7136524-7136643)
chr8 (14-130)||(20869944-20870063)
chr8 (14-92)||(26102578-26102655)
chr8 (14-111)||(8897761-8897857)
chr8 (44-130)||(29877115-29877202)
chr8 (16-130)||(39460993-39461110)
chr8 (44-111)||(2626564-2626630)
chr8 (44-130)||(20869527-20869610)
chr8 (67-133)||(5689649-5689717)
chr8 (17-111)||(16225061-16225156)
chr8 (68-125)||(23286375-23286432)
chr8 (17-130)||(29521685-29521799)
chr8 (46-130)||(5135318-5135403)
chr8 (16-83)||(35107310-35107376)
chr8 (78-133)||(14018029-14018086)
chr8 (47-128)||(24365089-24365172)
chr8 (16-130)||(26954153-26954271)
chr8 (16-97)||(31457228-31457308)
chr8 (15-111)||(10857871-10857966)
chr8 (14-66)||(27468089-27468141)
[»] scaffold0168 (1 HSPs)
scaffold0168 (15-130)||(30600-30714)
[»] chr3 (41 HSPs)
chr3 (15-130)||(1217133-1217247)
chr3 (17-130)||(31592892-31593004)
chr3 (13-124)||(15797271-15797381)
chr3 (18-130)||(22122918-22123029)
chr3 (15-115)||(34771362-34771461)
chr3 (17-128)||(39203561-39203671)
chr3 (13-130)||(40272808-40272926)
chr3 (18-133)||(22609806-22609921)
chr3 (15-130)||(54484733-54484850)
chr3 (18-130)||(7696893-7696999)
chr3 (12-131)||(49013468-49013590)
chr3 (16-130)||(13628789-13628906)
chr3 (14-130)||(13730599-13730718)
chr3 (11-128)||(16735486-16735603)
chr3 (14-130)||(26869750-26869866)
chr3 (15-123)||(26292382-26292489)
chr3 (16-130)||(12914034-12914149)
chr3 (16-69)||(30452900-30452953)
chr3 (17-130)||(31831242-31831343)
chr3 (19-111)||(353351-353444)
chr3 (17-130)||(14987000-14987116)
chr3 (14-130)||(46421031-46421151)
chr3 (57-127)||(47624088-47624158)
chr3 (73-111)||(7943054-7943092)
chr3 (61-111)||(31904900-31904950)
chr3 (14-103)||(52926216-52926304)
chr3 (44-111)||(9276328-9276393)
chr3 (45-130)||(26573170-26573256)
chr3 (16-130)||(29366719-29366836)
chr3 (67-111)||(33235596-33235640)
chr3 (17-127)||(45786214-45786327)
chr3 (13-133)||(54374341-54374463)
chr3 (15-130)||(516452-516571)
chr3 (67-133)||(6411871-6411938)
chr3 (17-130)||(10795423-10795539)
chr3 (14-69)||(24851298-24851353)
chr3 (67-130)||(52428526-52428591)
chr3 (14-63)||(6242282-6242331)
chr3 (12-93)||(24577917-24577997)
chr3 (12-93)||(24578007-24578087)
chr3 (16-97)||(25517169-25517249)
[»] chr2 (25 HSPs)
chr2 (16-130)||(9671202-9671315)
chr2 (16-130)||(21779260-21779373)
chr2 (17-130)||(23397787-23397899)
chr2 (14-130)||(36871514-36871629)
chr2 (11-130)||(8455310-8455430)
chr2 (14-111)||(10546205-10546301)
chr2 (14-130)||(14444750-14444866)
chr2 (13-128)||(17623587-17623703)
chr2 (14-130)||(25249735-25249851)
chr2 (17-130)||(10543719-10543835)
chr2 (52-130)||(12023954-12024032)
chr2 (57-130)||(22371078-22371149)
chr2 (14-133)||(30826055-30826173)
chr2 (13-130)||(17668023-17668141)
chr2 (17-130)||(14530339-14530455)
chr2 (16-130)||(11514457-11514571)
chr2 (67-129)||(32781337-32781401)
chr2 (17-130)||(40762234-40762348)
chr2 (16-111)||(5841070-5841166)
chr2 (69-126)||(27573646-27573704)
chr2 (14-68)||(39189501-39189555)
chr2 (67-128)||(99314-99375)
chr2 (84-130)||(24200691-24200739)
chr2 (16-69)||(34080184-34080237)
chr2 (84-133)||(7214552-7214603)
[»] scaffold0187 (2 HSPs)
scaffold0187 (19-130)||(10052-10162)
scaffold0187 (19-130)||(20380-20490)
[»] scaffold0057 (3 HSPs)
scaffold0057 (16-130)||(43680-43794)
scaffold0057 (14-130)||(46852-46969)
scaffold0057 (14-126)||(24769-24882)
[»] scaffold0223 (1 HSPs)
scaffold0223 (17-130)||(11152-11264)
[»] scaffold0180 (1 HSPs)
scaffold0180 (14-105)||(24130-24220)
[»] scaffold0258 (1 HSPs)
scaffold0258 (15-130)||(13022-13137)
[»] scaffold0049 (1 HSPs)
scaffold0049 (17-130)||(58998-59114)
[»] scaffold0311 (1 HSPs)
scaffold0311 (16-111)||(10852-10946)
[»] scaffold1176 (1 HSPs)
scaffold1176 (21-127)||(1591-1696)


Alignment Details
Target: chr1 (Bit Score: 134; Significance: 9e-70; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 87 - 292
Target Start/End: Original strand, 44745854 - 44746064
Alignment:
Q  87 attgtacgcagtcttaccctgttttacacacgaggctgtttccaagatatcagagcggactttgctaggaacaa-----ggtctcccttgttttcgcttt 181  Q
    |||||||||||  ||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||     |||||| ||||||||||||||    
T  44745854 attgtacgcagctttaccttgttttacacaagaggctgtttccaggatatcagagcggactttgctaggaacaaattaaggtctctcttgttttcgcttt 44745953  T
Q  182 gctaacttgaagggttttggccggtatagtctaccatttccttttttgttccctttttatttctatatttactaggggcaacccgnnnnnnngcttaaaa 281  Q
    |||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       ||||||||    
T  44745954 gctaactgaaagggttttggccggtatagtctaccatttcctcttttgttccctttttatttctatatttactaggggcaacccgtttttttgcttaaaa 44746053  T
Q  282 aagacagtaaa 292  Q
    |||||||||||    
T  44746054 aagacagtaaa 44746064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 34725097 - 34725210
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacac 115  Q
    ||||||||||||||||| ||||||||  |||||||||||| ||||||||||||| | |||||||||| |||||||||||||| |||||||||||||||||    
T  34725097 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaagggg-tcccaccatttagtgtattgtacgcagccttaccctgttttacac 34725195  T
Q  116 acgaggctgtttcca 130  Q
    | |||||||||||||    
T  34725196 aagaggctgtttcca 34725210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 38478277 - 38478392
Alignment:
Q  12 ttaaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    ||||||||||||||||||||| ||||||||  |||||||||||| ||||| ||||||| |||||||||||  |||||||||||||| |||||||||||||    
T  38478277 ttaaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgagaagggg-ttccaccatttggtgtattgtacgcagccttaccctgtttt 38478375  T
Q  112 acacacgaggctgtttc 128  Q
    ||||| |||||||||||    
T  38478376 acacaagaggctgtttc 38478392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 35253185 - 35253297
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttaca 114  Q
    ||||||||||| |||||| ||||||||  |||||||||||| ||||||||||||| | |||||||||  |||||||||||||| ||||||||||||||||    
T  35253185 aaaaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgttttaca 35253283  T
Q  115 cacgaggctgtttc 128  Q
    || |||||||||||    
T  35253284 caagaggctgtttc 35253297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 133
Target Start/End: Original strand, 46247949 - 46248070
Alignment:
Q  13 taaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--ttt 110  Q
    |||||||||||||||||||  |||| |||  ||||||| |||| ||||||||||||| | |||||||||  ||||||||||||||||||||||||  |||    
T  46247949 taaaaaagggcaacccggtacactaaagctcccgcatacgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagtcttaccctgttttt 46248047  T
Q  111 tacacacgaggctgtttccaaga 133  Q
    |||||| ||||||||||||||||    
T  46248048 tacacaagaggctgtttccaaga 46248070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 19414596 - 19414485
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacac 115  Q
    ||||||||||||||||| ||||||||  |||||||||||| || |||||| ||||| |||||||||  |||||||||||||| |||| |||||||||||     
T  19414596 aaaagggcaacccggtgcactagagctcccgcatatgcagggtacgggaa-ggggtcccaccatttggtgtattgtacgcagccttaacctgttttacat 19414498  T
Q  116 acgaggctgtttc 128  Q
    | |||||| ||||    
T  19414497 aagaggctctttc 19414485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 12126836 - 12126949
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacac 115  Q
    ||||||||||| | ||| |||| |||  |||||||||||| ||||||||||||| | |||| ||||  |||||||||||||| |||||||||||||||||    
T  12126836 aaaagggcaacgcagtgcactacagctcccgcatatgcagggtccgggaagggg-tcccacaatttggtgtattgtacgcagccttaccctgttttacac 12126934  T
Q  116 acgaggctgtttcca 130  Q
    | || ||||||||||    
T  12126935 aagaagctgtttcca 12126949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 4349796 - 4349703
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    |||||||||||||||| |||| |||  ||||||| |||| ||||||||||||| | |||||||||  |||||||||||||| |||||||||||||    
T  4349796 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgtttt 4349703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 31382211 - 31382327
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-tttta 112  Q
    ||||||||||||||||||  | || |||  |||||||||||| |||| |||||||| | |||||||||  |||||||||||||| |||| |||| |||||    
T  31382211 aaaaaagggcaacccggtacagtaaagctcccgcatatgcagggtccaggaagggg-tcccaccatttggtgtattgtacgcagccttatcctgttttta 31382309  T
Q  113 cacacgaggctgtttcca 130  Q
    |||| |||||||||||||    
T  31382310 cacaagaggctgtttcca 31382327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 45812534 - 45812646
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttac 113  Q
    |||||| |||||||||||| ||||||||  |||||||||||| ||  ||||| ||||| |||||||||  ||||||||| |||| |||||||| ||||||    
T  45812534 aaaaaaaggcaacccggtgcactagagctcccgcatatgcagggtttgggaa-ggggtcccaccatttggtgtattgtatgcagccttaccctcttttac 45812632  T
Q  114 acacgaggctgttt 127  Q
    ||| ||| ||||||    
T  45812633 acaagagactgttt 45812646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 47214670 - 47214555
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttac 113  Q
    ||||||||| || | |||| ||||||||  |||||||||||| ||| ||||||||| | |||||||||  |||||||||||||  ||||||||||||||     
T  47214670 aaaaaagggtaatctggtgcactagagctcccgcatatgcagggtctgggaagggg-tcccaccatttggtgtattgtacgcaaccttaccctgttttaa 47214572  T
Q  114 acacgaggctgtttcca 130  Q
    ||| ||| |||||||||    
T  47214571 acaagagactgtttcca 47214555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 27474439 - 27474322
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttaca 114  Q
    |||||||||| |||||| |||| |||  ||||||| |||| ||||||||| ||||| |||||||| | ||||||||||||||  || ||||| |||||||    
T  27474439 aaaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaa-ggggtcccaccattcagtgtattgtacgcagctttgccctgtttttaca 27474341  T
Q  115 cacgaggctgtttccaaga 133  Q
    || ||| ||||||||||||    
T  27474340 caagagactgtttccaaga 27474322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 14617197 - 14617082
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgt--tttac 113  Q
    ||||||| ||||||||| |||| |||  |||||||||||| ||||||||| ||| | |||||||||  |||||||||||||  |||||| |||  |||||    
T  14617197 aaaagggtaacccggtgcactaaagctcccgcatatgcagggtccgggaa-gggatcccaccatttggtgtattgtacgcaaccttaccttgttatttac 14617099  T
Q  114 acacgaggctgtttcca 130  Q
    ||| |||||||||||||    
T  14617098 acaagaggctgtttcca 14617082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 30395725 - 30395842
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctg--tttt 111  Q
    ||||||||||| ||||| |||| |||  |||||||||| | ||||||||| ||||| |||||||  ||  |||||||||||||| |||||||||  ||||    
T  30395725 aaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaa-ggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 30395823  T
Q  112 acacacgaggctgtttcca 130  Q
    ||||| |||||||||||||    
T  30395824 acacaagaggctgtttcca 30395842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 18944807 - 18944687
Alignment:
Q  14 aaaaaagggcaacccggtgtactaga-gcatccgcatatgcagagtccgggaagggggttccaccatt--taatgtattgtacgcagtcttaccctg--t 108  Q
    ||||||||||||||||||| |||| | ||  ||||||| |||| ||||||||||||| | ||||||||  |  |||||||||||||| |||||||||  |    
T  18944807 aaaaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaagggg-tcccaccattgttggtgtattgtacgcagccttaccctgttt 18944709  T
Q  109 tttacacacgaggctgtttcca 130  Q
    |||||||| |||||||||||||    
T  18944708 tttacacaagaggctgtttcca 18944687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 32632584 - 32632670
Alignment:
Q  44 ccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttacacacgaggctgtttcca 130  Q
    |||||||||||| ||  ||||||||| | |||||||||  |||||||||||||| ||||||||| ||||||||| |||||||||||||    
T  32632584 ccgcatatgcagggtttgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttcca 32632670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 35005284 - 35005164
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccacca--tttaatgtattgtacgcagtcttaccctg--tttt 111  Q
    ||||||||||||||||| |||| |||  ||||||| |||| ||||||||| ||||| ||||||  |||  ||||||||| |||| |||||||||  ||||    
T  35005284 aaaagggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaa-ggggtcccaccatttttggtgtattgtatgcagccttaccctgtttttt 35005186  T
Q  112 acacacgaggctgtttccaaga 133  Q
    ||||| |||||||||| |||||    
T  35005185 acacaagaggctgttttcaaga 35005164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 46991967 - 46991848
Alignment:
Q  12 ttaaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--tt 109  Q
    ||||||| ||||||||||||| |||| |||  || |||| |||| ||||||||| ||||| ||||||||   |||||||||| ||| |||||||||  ||    
T  46991967 ttaaaaatgggcaacccggtgcactaaagctcccacatacgcagggtccgggaa-ggggtcccaccattcggtgtattgtacacagccttaccctgtttt 46991869  T
Q  110 ttacacacgaggctgtttcca 130  Q
    ||||||| |||| ||||||||    
T  46991868 ttacacaagaggttgtttcca 46991848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 10378738 - 10378828
Alignment:
Q  20 gggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    ||||| ||||||| |||| |||  |||||||||||| ||||  ||||||| | |||||||||  |||||||||||||| |||||||||||||    
T  10378738 gggcagcccggtgcactaaagctcccgcatatgcagggtccaagaagggg-tcccaccatttggtgtattgtacgcagccttaccctgtttt 10378828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 50606564 - 50606509
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggg 69  Q
    ||||||||||||||||||| |||| |||  |||||||||||| |||||||||||||    
T  50606564 aaaaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaagggg 50606509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 23768347 - 23768434
Alignment:
Q  44 ccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--ttttacacacgaggctgtttcca 130  Q
    ||||||| |||| ||| ||||||| | | |||||||||  |||||||||||||| |||||||||  ||||||||| |||||||||||||    
T  23768347 ccgcatacgcagggtctgggaaggtg-tcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttcca 23768434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 111
Target Start/End: Original strand, 34679263 - 34679312
Alignment:
Q  62 ggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    |||| |||| |||||||||| |||||| ||||||||||||||||||||||    
T  34679263 ggaacggggctccaccatttgatgtatagtacgcagtcttaccctgtttt 34679312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 45402257 - 45402138
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcag-tctt--accctg-tt 109  Q
    ||||| ||||||||||||| |||| |||  ||||||| |||| ||| ||||| ||||| |||||||||  ||||||||||||||  |||  |||||| ||    
T  45402257 aaaaacgggcaacccggtgcactaaagctcccgcatacgcagggtctgggaa-ggggtcccaccatttggtgtattgtacgcagaacttgaaccctgttt 45402159  T
Q  110 ttacacacgaggctgtttcca 130  Q
    ||||||| |||||||||||||    
T  45402158 ttacacaagaggctgtttcca 45402138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 6983855 - 6983923
Alignment:
Q  62 ggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacacacgaggctgtttcca 130  Q
    |||| ||||| |||||||||  |||||||||||||  |||||||||||||  | |||||||||||||||    
T  6983855 ggaaaggggtcccaccatttggtgtattgtacgcatacttaccctgttttttatacgaggctgtttcca 6983923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 10668386 - 10668269
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctg--tttt 111  Q
    ||||||||||||||||| |||| |||  ||||||| |||| | ||||||| ||||| |||||||  ||  |||||||||||||  |||||| ||  ||||    
T  10668386 aaaagggcaacccggtgcactaaagctcccgcatacgcagggaccgggaa-ggggtcccaccattattggtgtattgtacgcaaccttaccttgtttttt 10668288  T
Q  112 acacacgaggctgtttcca 130  Q
    ||||| |||||||||||||    
T  10668287 acacaagaggctgtttcca 10668269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 15505695 - 15505632
Alignment:
Q  44 ccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgt 108  Q
    ||||||| |||| || |||||||||| | |||||||||  |||||||||||||||||||||||||    
T  15505695 ccgcatacgcagggttcgggaagggg-tcccaccatttggtgtattgtacgcagtcttaccctgt 15505632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 20004089 - 20004206
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctg--tttt 111  Q
    ||||||||||||||||| |||| |||  |||||||||| | ||| ||||| ||||| |||||||  ||  |||||||||||||| |||||| ||  ||||    
T  20004089 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtctgggaa-ggggtcccaccattattggtgtattgtacgcagccttaccttgtttttt 20004187  T
Q  112 acacacgaggctgtttcca 130  Q
    ||||  |||||||||||||    
T  20004188 acacgagaggctgtttcca 20004206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 23796626 - 23796509
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--tttt 111  Q
    ||||||||||| ||||||| |||| |||  | |||||||||| ||| ||||| |||||  ||||||||  |||||||||||||  |||||  ||  ||||    
T  23796626 aaaaaagggcagcccggtgcactaaagctccagcatatgcagggtctgggaa-ggggtctcaccatttggtgtattgtacgcaaccttacattgattttt 23796528  T
Q  112 acacacgaggctgtttcca 130  Q
    ||||| |||||||||||||    
T  23796527 acacaagaggctgtttcca 23796509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 27201811 - 27201691
Alignment:
Q  13 taaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaa--tgtattgtacgcagtcttaccctgtt- 109  Q
    ||||||||||||||||  || |||| |||  ||||||| |||  ||||||||||||| | |||||||||    |||||||||||||| |||||||||||     
T  27201811 taaaaaagggcaacccaatgcactaaagctcccgcatacgcaaggtccgggaagggg-tcccaccatttttggtgtattgtacgcagccttaccctgttt 27201713  T
Q  110 -ttacacacgaggctgtttcca 130  Q
     | ||||| |||||||||||||    
T  27201712 ctgacacaagaggctgtttcca 27201691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 111
Target Start/End: Original strand, 4430081 - 4430119
Alignment:
Q  73 ccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  4430081 ccaccatttggtgtattgtacgcagtcttaccctgtttt 4430119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 22324984 - 22324934
Alignment:
Q  84 tgtattgtacgcagtcttaccctgtttt-acacacgaggctgtttccaaga 133  Q
    ||||||||| |||| ||||||||||||| ||||| ||||||||||||||||    
T  22324984 tgtattgtatgcagccttaccctgtttttacacaagaggctgtttccaaga 22324934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 128
Target Start/End: Complemental strand, 11596643 - 11596559
Alignment:
Q  44 ccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttacacacgaggctgtttc 128  Q
    ||||||| |||| |||| |||||||| | |||||||||  |||||| ||||||| ||||||||| ||||||||| |||| ||||||    
T  11596643 ccgcatacgcagggtccaggaagggg-tcccaccatttggtgtattatacgcagccttaccctgtttttacacaagaggttgtttc 11596559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 18724572 - 18724659
Alignment:
Q  44 ccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--ttttacacacgaggctgtttcca 130  Q
    ||||||||| || ||||||||||||| | |||  ||||  |||||||||| ||| |||||||||  ||||||||| |||||||||||||    
T  18724572 ccgcatatgtagggtccgggaagggg-tcccaagatttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttcca 18724659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 41319833 - 41319920
Alignment:
Q  44 ccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--ttttacacacgaggctgtttcca 130  Q
    ||||||||| || || |||||||||| | ||| |||||  |||||||||||||| |||||||||  ||||||||| ||| |||||||||    
T  41319833 ccgcatatgaagggttcgggaagggg-tcccatcatttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttcca 41319920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 20036350 - 20036291
Alignment:
Q  46 gcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccct 106  Q
    ||||| |||| ||||||||||||| |||||||||||  ||||||| ||||| |||||||||    
T  20036350 gcatacgcagggtccgggaagggg-ttccaccatttggtgtattgaacgcaatcttaccct 20036291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 48633 - 48746
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacac 115  Q
    ||||||||||||||||| ||||||||  |||||||||||| ||||||||||||| | |||||||||  |||||||||||||| |||||||||||||||||    
T  48633 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgttttacac 48731  T
Q  116 acgaggctgtttcca 130  Q
    | |||||||||||||    
T  48732 aagaggctgtttcca 48746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 4e-32; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 21172008 - 21172121
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacac 115  Q
    ||||||||||||||||| ||||||||  |||||||||||| ||||||||||||| | |||||||||  |||||||||||||| |||||||||||||||||    
T  21172008 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgttttacac 21172106  T
Q  116 acgaggctgtttcca 130  Q
    | |||||||||||||    
T  21172107 aagaggctgtttcca 21172121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 32758397 - 32758282
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttac 113  Q
    ||||||||||||||||||| ||||||||  |||||||||||| ||||||||||||| | |||||||||  |||||||||| ||| |||||||||||||||    
T  32758397 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaagggg-tcccaccatttggtgtattgtacacagccttaccctgttttac 32758299  T
Q  114 acacgaggctgtttcca 130  Q
    ||| |||||||||||||    
T  32758298 acaagaggctgtttcca 32758282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 42391097 - 42391212
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttac 113  Q
    ||||||||||||||||||| ||||||||  |||||||||||| ||||||||| ||||| |||||||||  |||||||||||||| |||||||||||||||    
T  42391097 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaa-ggggtcccaccatttggtgtattgtacgcagccttaccctgttttac 42391195  T
Q  114 acacgaggctgtttcca 130  Q
    ||| || ||||||||||    
T  42391196 acaagaagctgtttcca 42391212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 48735122 - 48735236
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacaca 116  Q
    |||||||||||||||| ||||||||  |||||||||||| ||||||||||||| | |||||||||  |||||||||||||| |||||| |||||||||||    
T  48735122 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccgtgttttacaca 48735220  T
Q  117 cgaggctgtttccaag 132  Q
     |||| ||||||||||    
T  48735221 agaggttgtttccaag 48735236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 31591108 - 31591221
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacac 115  Q
    ||||||||||||||||| ||||||||  |||||||||||  ||||||||||||| | |||||||||| |||||||||||||| ||||| |||||||||||    
T  31591108 aaaagggcaacccggtgcactagagctcccgcatatgcaaggtccgggaagggg-tcccaccatttattgtattgtacgcagccttactctgttttacac 31591206  T
Q  116 acgaggctgtttcca 130  Q
    | |||| ||||||||    
T  31591207 aagaggttgtttcca 31591221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 10693073 - 10693185
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacaca 116  Q
    |||||||||||| ||| ||||||||  |||||||||||| ||||||||||||| | |||||||||  |||||||||||||| |||||||| |||||||||    
T  10693073 aaagggcaacccagtgcactagagctcccgcatatgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctcttttacaca 10693171  T
Q  117 cgaggctgtttcca 130  Q
     |||||||||||||    
T  10693172 agaggctgtttcca 10693185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 42477005 - 42476894
Alignment:
Q  18 aagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacacac 117  Q
    |||||||||| |||| ||||||||  |||||||||||||| |  |||||||| | |||||||||  |||||||||||||| |||||| |||||||||||     
T  42477005 aagggcaacctggtgcactagagctcccgcatatgcagagcctaggaagggg-tcccaccatttggtgtattgtacgcagccttaccttgttttacacaa 42476907  T
Q  118 gaggctgtttcca 130  Q
    ||| |||||||||    
T  42476906 gagactgtttcca 42476894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 11741927 - 11741831
Alignment:
Q  18 aagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacac 115  Q
    ||||||||||||||| ||||||||  |||||| |||||| |||||||| ||| | |||||||||  |||||||||||||| |||||||| ||||||||    
T  11741927 aagggcaacccggtgcactagagctcccgcatgtgcagaatccgggaa-gggatcccaccatttggtgtattgtacgcagccttaccctattttacac 11741831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 34626205 - 34626321
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-tttta 112  Q
    |||||||||||||||| || |||| |||  ||||||| |||| ||||||||| ||| | |||||||||  ||||||| |||||| ||||||||| |||||    
T  34626205 aaaaaagggcaacccgatgaactaaagctcccgcatacgcagggtccgggaa-gggatcccaccatttggtgtattgaacgcagccttaccctgttttta 34626303  T
Q  113 cacacgaggctgtttcca 130  Q
    |||| |||||||||||||    
T  34626304 cacaggaggctgtttcca 34626321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 42798806 - 42798687
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--tttta 112  Q
    ||||||||||||||| || |||| |||  |||||||||||| |||||||||  |||| |||||||||  |||||||||||||| |||||| ||  |||||    
T  42798806 aaaaagggcaacccgatgcactatagctcccgcatatgcagggtccgggaa-agggtcccaccatttggtgtattgtacgcagccttaccttgtttttta 42798708  T
Q  113 cacacgaggctgtttccaaga 133  Q
    |||| ||| ||||||||||||    
T  42798707 cacaagagactgtttccaaga 42798687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 19426887 - 19427003
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccc--tgtttt 111  Q
    ||||||||||||||||||| |||  |||   ||||||||||| ||||| ||||||  | |||||||||  ||||||||||||||||||||||  | ||||    
T  19426887 aaaaaagggcaacccggtgcactgaagctctcgcatatgcagggtccgagaaggg--tcccaccatttggtgtattgtacgcagtcttaccctatttttt 19426984  T
Q  112 acacacgaggctgtttcca 130  Q
    ||||| |||||||||||||    
T  19426985 acacaagaggctgtttcca 19427003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 27629771 - 27629655
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--tttta 112  Q
    |||||||||||||||||| |||  |||  |||||||||||| | ||||||| ||||| |||||||||  |||||| ||||||  |||||||||  |||||    
T  27629771 aaaaagggcaacccggtgcactgaagctaccgcatatgcagggcccgggaa-ggggtcccaccatttggtgtattttacgcaaccttaccctgtttttta 27629673  T
Q  113 cacacgaggctgtttcca 130  Q
    |||| |||||||||||||    
T  27629672 cacaagaggctgtttcca 27629655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 7879776 - 7879680
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    ||||||||||||||||||| |||  |||  ||||||| |||| ||||||||| ||||| |||||||||  |||||||||||||| |||||| ||||||    
T  7879776 aaaaaagggcaacccggtgcactgaagctcccgcatacgcagggtccgggaa-ggggtcccaccatttggtgtattgtacgcagccttaccttgtttt 7879680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 42805663 - 42805545
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctg--ttt 110  Q
    |||||||||||||||||| |||| |||  |||||||||| | ||||||||| ||||| |||||||  ||  |||||||||| ||| |||||||||  |||    
T  42805663 aaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaa-ggggtcccaccattattggtgtattgtacacagccttaccctgttttt 42805565  T
Q  111 tacacacgaggctgtttcca 130  Q
    |||||| |||||||||||||    
T  42805564 tacacaagaggctgtttcca 42805545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 2541019 - 2541133
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--ttttaca 114  Q
    |||||| ||||||||| |||| |||  ||||||| |||| | ||||||||||| | |||||||||  ||||| |||||||| |||||||||  |||||||    
T  2541019 aaagggaaacccggtgcactaaagctcccgcatacgcagggaccgggaagggg-tcccaccatttggtgtatagtacgcagccttaccctgttttttaca 2541117  T
Q  115 cacgaggctgtttcca 130  Q
    || |||||||||||||    
T  2541118 caagaggctgtttcca 2541133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 97
Target Start/End: Original strand, 27889312 - 27889395
Alignment:
Q  13 taaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcag 97  Q
    ||||||||||||||||||||||| | |||  ||||||| |||| ||||||||| ||||| |||||||||  ||||||||||||||    
T  27889312 taaaaaagggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaa-ggggtcccaccatttggtgtattgtacgcag 27889395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 11617589 - 11617702
Alignment:
Q  18 aagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--ttttacac 115  Q
    ||||||||||||||| |||| ||   | ||||| |||| |||| |||||||| | |||||||||  ||||||||||||||||||||||||  ||||||||    
T  11617589 aagggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaagggg-tcccaccatttggtgtattgtacgcagtcttaccctgttttttacac 11617687  T
Q  116 acgaggctgtttcca 130  Q
    | |||| ||||||||    
T  11617688 aagaggttgtttcca 11617702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 35334818 - 35334928
Alignment:
Q  19 agggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacacacg 118  Q
    |||| ||||||||| |||| |||  | ||||| |||| ||||||||||||| | ||||||||   |||||||||| |||||||||||||||||  |||||    
T  35334818 agggaaacccggtgcactaaagctcctgcatacgcagggtccgggaagggg-tcccaccattcggtgtattgtacacagtcttaccctgttttttacacg 35334916  T
Q  119 aggctgtttcca 130  Q
    || |||||||||    
T  35334917 agactgtttcca 35334928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 43557613 - 43557493
Alignment:
Q  14 aaaaaagggcaacccggtgtactaga-gcatccgcatatgcagagtccgggaagggggttccaccatt--taatgtattgtacgcagtcttaccctg--t 108  Q
    ||||||||||||||||||| |||| | ||  ||||||| ||||||||||||| |||||| ||||||||  |  |||||||||||||| ||||| |||  |    
T  43557613 aaaaaagggcaacccggtgcactaaaagctcccgcatacgcagagtccggga-gggggtcccaccattattggtgtattgtacgcagccttactctgttt 43557515  T
Q  109 tttacacacgaggctgtttcca 130  Q
    |||||||| |||||||||||||    
T  43557514 tttacacaagaggctgtttcca 43557493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 47716596 - 47716480
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctg--tttta 112  Q
    |||||||||||||||| || | |||  |||||||||| | ||||||||| ||||| |||||||  ||  |||||||||||||| |||||||||  |||||    
T  47716596 aaagggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaa-ggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 47716498  T
Q  113 cacacgaggctgtttcca 130  Q
    |||| |||||||||||||    
T  47716497 cacaagaggctgtttcca 47716480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 2662985 - 2663047
Alignment:
Q  68 gggttccaccatttaatgtattgtacgcagtcttaccctgttttacacacgaggctgtttcca 130  Q
    |||| |||||||||  |||||||||||||| |||||||| ||||||||| |||||||||||||    
T  2662985 gggtcccaccatttggtgtattgtacgcagccttaccctattttacacaagaggctgtttcca 2663047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 23419723 - 23419788
Alignment:
Q  67 ggggttccaccatttaatgtattgtacgcagtcttaccctg--ttttacacacgaggctgtttcca 130  Q
    ||||| |||||||||  ||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  23419723 ggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttcca 23419788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 133
Target Start/End: Complemental strand, 19265951 - 19265833
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccct-gtttta 112  Q
    ||||||||||| ||||||| |||| |||  || |||||| || ||||||||||||| | |||||||||  |||||||||||||| ||||||||  |||||    
T  19265951 aaaaaagggcagcccggtgcactaaagctcccacatatgtag-gtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctcttttta 19265854  T
Q  113 cacacgaggctgtttccaaga 133  Q
    |||| | |||||| |||||||    
T  19265853 cacaagcggctgtatccaaga 19265833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 38604634 - 38604548
Alignment:
Q  44 ccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttacacacgaggctgtttcca 130  Q
    ||||||| |||| |||||| ||||||  || |||||||  |||||||||||||| ||||||||| ||||||||| |||||||||||||    
T  38604634 ccgcatacgcagggtccggaaaggggtctc-accatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttcca 38604548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 22698967 - 22699063
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaa--tgtattgtacgcagtcttaccctgtttt 111  Q
    |||||| ||||||||| |||| |||  |||||||  ||| |||||||||  |||| |||||||||    ||||||||||||||||||||||||||||    
T  22698967 aaagggtaacccggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtcttaccctgtttt 22699063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 47077852 - 47077967
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttac 113  Q
    |||||| ||||| |||||| ||||||||  ||||||||| || ||  ||||||||| | |||||||||  |||||||||||||   |||| || ||||||    
T  47077852 aaaaaaaggcaatccggtgcactagagctcccgcatatgtagggtttgggaagggg-tcccaccattttgtgtattgtacgcaactttactctattttac 47077950  T
Q  114 acacgaggctgtttcca 130  Q
    ||| ||| |||||||||    
T  47077951 acaagagactgtttcca 47077967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 1408595 - 1408478
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--tttt 111  Q
    |||||| ||||| |||||| |||| ||  || ||||| |||| ||||||||| ||||| |||||||||  |||||||||| ||| |||||| ||  ||||    
T  1408595 aaaaaaaggcaatccggtgaactaaagattctgcatacgcagggtccgggaa-ggggtcccaccatttgctgtattgtacacagccttaccttgtttttt 1408497  T
Q  112 acacacgaggctgtttcca 130  Q
    ||||| |||||| ||||||    
T  1408496 acacaagaggctatttcca 1408478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 48123533 - 48123598
Alignment:
Q  67 ggggttccaccatttaatgtattgtacgcagtcttaccctgtt--ttacacacgaggctgtttcca 130  Q
    ||||| |||||||||  ||||||||| ||||| ||||||||||  ||||||| |||||||||||||    
T  48123533 ggggtcccaccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttcca 48123598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 40464012 - 40463900
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttaca 114  Q
    ||||||||||| ||||| |||  |||  ||||||| |||| ||||| ||| ||||| |||||||||  |||||| ||||||| ||||||| | |||||||    
T  40464012 aaaagggcaactcggtgcactgaagctcccgcatacgcagggtccgagaa-ggggtcccaccatttggtgtattatacgcagccttacccagtttttaca 40463914  T
Q  115 cacgaggctgtttc 128  Q
    || ||| |||||||    
T  40463913 caagagactgtttc 40463900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 14099055 - 14099099
Alignment:
Q  67 ggggttccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    ||||| |||||||||  ||||||||||||||||||| ||||||||    
T  14099055 ggggtcccaccatttggtgtattgtacgcagtcttaacctgtttt 14099099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 14409072 - 14409116
Alignment:
Q  67 ggggttccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    ||||| |||||||||  ||||||||||||||||||| ||||||||    
T  14409072 ggggtcccaccatttggtgtattgtacgcagtcttaacctgtttt 14409116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 18512455 - 18512546
Alignment:
Q  19 agggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    |||||||||| ||| || | |||  ||||||| |||| ||||||||||||| | ||||||||   |||||||||||||| |||||||| ||||    
T  18512455 agggcaacccagtgcaccaaagctcccgcatacgcagggtccgggaagggg-tcccaccattcggtgtattgtacgcagccttaccctatttt 18512546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 18747621 - 18747504
Alignment:
Q  18 aagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg---ttttaca 114  Q
    ||||||| ||||||| |||| |||  ||||||| |||| || | |||||||| | |||||| ||  |||||| ||||||| |||||||||   |||||||    
T  18747621 aagggcagcccggtgcactaaagctcccgcatacgcagggttcaggaagggg-tcccaccaattggtgtattatacgcagccttaccctgcttttttaca 18747523  T
Q  115 cacgaggctgtttccaaga 133  Q
    ||  |||||||||||||||    
T  18747522 caaaaggctgtttccaaga 18747504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 23619026 - 23619093
Alignment:
Q  67 ggggttccaccatttaatgtattgtacgcagtcttaccctgttttacacacgaggctgtttccaagata 135  Q
    ||||| ||||||||| ||||||||||| ||  ||||| |||||||| ||| |||| |||||||||||||    
T  23619026 ggggtcccaccatttgatgtattgtacacaagcttactctgttttataca-gaggttgtttccaagata 23619093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 33871959 - 33872023
Alignment:
Q  67 ggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttacacacgaggctgtttcca 130  Q
    ||||| |||||||||  |||||||||||||| |||| |||| ||||||||| |||| ||||||||    
T  33871959 ggggtcccaccatttggtgtattgtacgcagccttatcctgtttttacacaagaggttgtttcca 33872023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 1354756 - 1354869
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacac 115  Q
    ||||||||||||||||| ||||||||  |||||||||||| ||||||||||||| | |||||||||  |||||||||||||| |||||||||||||||||    
T  1354756 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgttttacac 1354854  T
Q  116 acgaggctgtttcca 130  Q
    | |||||||||||||    
T  1354855 aagaggctgtttcca 1354869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 1347100 - 1346985
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttac 113  Q
    ||||||||||||||||||| ||||||||  |||||||||||| ||||||||||||| | |||||||||  |||||||||||||| |||||||||||||||    
T  1347100 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgttttac 1347002  T
Q  114 acacgaggctgtttcca 130  Q
    ||| | |||||||||||    
T  1347001 acaagtggctgtttcca 1346985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 25557860 - 25557746
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttaca 114  Q
    |||||||||||||||||| ||||||||  |||||||||||| ||||||||||||| ||||  |||||  |||||||||||||| ||||||||||||||||    
T  25557860 aaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaagggg-ttccttcatttggtgtattgtacgcagccttaccctgttttaca 25557762  T
Q  115 cacgaggctgtttcca 130  Q
    || |||||||||||||    
T  25557761 caagaggctgtttcca 25557746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 26097295 - 26097181
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttaca 114  Q
    |||||||||||||||||| ||||||||  |||||||||||| ||||||||||||| | ||  |||||  |||||||||||||| ||||||||||||||||    
T  26097295 aaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaagggg-tcccttcatttggtgtattgtacgcagccttaccctgttttaca 26097197  T
Q  115 cacgaggctgtttcca 130  Q
    || |||||||||||||    
T  26097196 caagaggctgtttcca 26097181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 29355853 - 29355971
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctgtt--t 110  Q
    |||||||||||||||||| |||| |||  ||||||| |||| ||||||||| ||||| |||||||  ||  |||||||||||||| |||||||||||  |    
T  29355853 aaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa-ggggtcccaccattattggtgtattgtacgcagccttaccctgtttct 29355951  T
Q  111 tacacacgaggctgtttcca 130  Q
    |||||| |||||||||||||    
T  29355952 tacacaagaggctgtttcca 29355971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 9161262 - 9161144
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctg-ttt 110  Q
    |||||||||||||| |||| |||| ||| |||||||| |||| ||||| ||| ||||| |||||||  || ||||||||||||||| ||||| ||| |||    
T  9161262 aaaaaagggcaacctggtgcactaaagcttccgcatacgcagggtccgagaa-ggggtcccaccattattgatgtattgtacgcagccttactctgtttt 9161164  T
Q  111 tacacacgaggctgtttcca 130  Q
    |||||| |||||||||||||    
T  9161163 tacacaagaggctgtttcca 9161144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 12221913 - 12222034
Alignment:
Q  16 aaaagggcaacccggtgtactaga-gcatccgcatatgcagagtccgggaagggggttccaccatt--taatgtattgtacgcagtcttaccctg--ttt 110  Q
    ||||||||||||||||| |||| | ||  ||||||| |||| ||||||||||||| | ||||||||  |  |||||||||||||| |||||||||  |||    
T  12221913 aaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaagggg-tcccaccattattggtgtattgtacgcagccttaccctgttttt 12222011  T
Q  111 tacacacgaggctgtttccaaga 133  Q
    |||||| ||||||||||||||||    
T  12222012 tacacaagaggctgtttccaaga 12222034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 28007761 - 28007649
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacac 115  Q
    ||||||| || |||||| |||||||| |||||||||| || ||  ||||||||| | ||| |||||  |||||||||||||| || ||||||||||||||    
T  28007761 aaaagggtaatccggtgcactagagcttccgcatatggag-gttagggaagggg-tcccagcatttggtgtattgtacgcagcctgaccctgttttacac 28007664  T
Q  116 acgaggctgtttcca 130  Q
    | |||||| ||||||    
T  28007663 aagaggctctttcca 28007649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 23240892 - 23240936
Alignment:
Q  86 tattgtacgcagtcttaccctgttttacacacgaggctgtttcca 130  Q
    |||||||||||  |||||||||||||||||| |||||||||||||    
T  23240892 tattgtacgcaaacttaccctgttttacacaagaggctgtttcca 23240936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 12892147 - 12892092
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggg 69  Q
    ||||||||||||||||||| |||| |||  |||||||||| | |||||||||||||    
T  12892147 aaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaagggg 12892092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 4e-32; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 32703558 - 32703445
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacac 115  Q
    ||||||||||||||||| ||||||||  |||||||||||| ||||||||||||| | |||||||||  |||||||||||||| |||||||||||||||||    
T  32703558 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgttttacac 32703460  T
Q  116 acgaggctgtttcca 130  Q
    | |||||||||||||    
T  32703459 aagaggctgtttcca 32703445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 7368528 - 7368419
Alignment:
Q  20 gggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacacacga 119  Q
    ||||||||||||| ||||||||  || ||||||||| ||||||||||||| | |||||| ||  |||||||||||||| |||||||||||||||||| ||    
T  7368528 gggcaacccggtgcactagagctcccacatatgcagggtccgggaagggg-tcccaccaattggtgtattgtacgcagccttaccctgttttacacaaga 7368430  T
Q  120 ggctgtttcca 130  Q
    |||||||||||    
T  7368429 ggctgtttcca 7368419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 130
Target Start/End: Complemental strand, 35710454 - 35710334
Alignment:
Q  9 actttaaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgt 108  Q
    |||| ||||||||||||||||||| ||||||||  |||||||||||   |||||||||||| | |||||||||  ||||||| |||||| |||||||| |    
T  35710454 acttcaaaaaagggcaacccggtgcactagagctcccgcatatgcatgttccgggaagggg-tcccaccatttggtgtattgaacgcagccttaccctat 35710356  T
Q  109 tttacacacgaggctgtttcca 130  Q
    |||||||| |||||||||||||    
T  35710355 tttacacaagaggctgtttcca 35710334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 8169982 - 8170096
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttaca 114  Q
    |||||||||||||||||| |||  | |  |||||||||||| ||||||||||||| | |||||||||  |||||||||||||| ||||||||||||||||    
T  8169982 aaaaagggcaacccggtgcactgaaactcccgcatatgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgttttaca 8170080  T
Q  115 cacgaggctgtttcca 130  Q
    ||  ||||||||||||    
T  8170081 caaaaggctgtttcca 8170096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 34154814 - 34154908
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttta 112  Q
    |||||||||||||||| ||||||||  |||||||||||| ||||||||| ||||| |||||||||  |||||||||||||| ||||||||| ||||    
T  34154814 aaagggcaacccggtgcactagagctaccgcatatgcagggtccgggaa-ggggtcccaccatttggtgtattgtacgcagccttaccctgattta 34154908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 41014454 - 41014340
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttaca 114  Q
    ||||||||||||||||| |||| |||  |||||||||| | |||| |||||||| | |||||||||  |||||||||||||| ||||||||| |||||||    
T  41014454 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccaggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgtttttaca 41014356  T
Q  115 cacgaggctgtttcca 130  Q
    || |||||||||||||    
T  41014355 caagaggctgtttcca 41014340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 24449028 - 24448911
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccc--tgtttt 111  Q
    ||||||||||||||||||| |||| |||  | ||||| |||| ||||||||| ||||| |||||||||  |||||||||||||| |||||||  | ||||    
T  24449028 aaaaaagggcaacccggtgcactaaagctcctgcatacgcagggtccgggaa-ggggtcccaccatttggtgtattgtacgcagccttaccctatttttt 24448930  T
Q  112 acacacgaggctgtttcca 130  Q
    |||||  ||||||||||||    
T  24448929 acacaaaaggctgtttcca 24448911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 38879719 - 38879602
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctg--tttt 111  Q
    ||||||||||||||||| |||| |||  ||||||| |||| ||||||||| ||||| |||||||  ||  |||||||||||||| |||||||||  ||||    
T  38879719 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa-ggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 38879621  T
Q  112 acacacgaggctgtttcca 130  Q
    | ||| |||||||||||||    
T  38879620 atacaagaggctgtttcca 38879602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 16028621 - 16028676
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggg 69  Q
    ||||||||||||||||||| ||||||||  |||||||||||| |||||||||||||    
T  16028621 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaagggg 16028676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 4619103 - 4619220
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctg--tttt 111  Q
    ||||||||||||||||| |||| |||   ||||||||| | ||||||||| ||||| |||||||  ||  |||||||||||||| |||||||||  ||||    
T  4619103 aaaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaa-ggggtcccaccattattggtgtattgtacgcagccttaccctgtttttt 4619201  T
Q  112 acacacgaggctgtttcca 130  Q
    ||||| |||||| ||||||    
T  4619202 acacaagaggctatttcca 4619220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 1405326 - 1405244
Alignment:
Q  13 taaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgca 96  Q
    ||||||||||||| |||||||||||||||  |||||||||||| || | ||||  |||| |||||||||  |||||||||||||    
T  1405326 taaaaaagggcaatccggtgtactagagctcccgcatatgcagggttcaggaa-agggtcccaccatttggtgtattgtacgca 1405244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 13801767 - 13801883
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctg--tttta 112  Q
    |||||||||||||||| |||| |||   ||||||||| | ||||||||| ||||| |||||||  ||  |||||||||||||| |||||||||  |||||    
T  13801767 aaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaa-ggggtcccaccattattggtgtattgtacgcagccttaccctgtttttta 13801865  T
Q  113 cacacgaggctgtttcca 130  Q
    |||| ||||||| |||||    
T  13801866 cacaagaggctgcttcca 13801883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 43334341 - 43334223
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaa--tgtattgtacgcagtcttaccctg---tt 109  Q
    |||||||||||||||||| |||| |||  ||||||  |||| ||||||||||||| | |||||||||    |||||||||||||| |||||||||   ||    
T  43334341 aaaaagggcaacccggtgcactaaagctcccgcatc-gcagggtccgggaagggg-tcccaccatttttggtgtattgtacgcagccttaccctgttttt 43334244  T
Q  110 ttacacacgaggctgtttcca 130  Q
    ||||||| |||||||||||||    
T  43334243 ttacacaggaggctgtttcca 43334223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 130
Target Start/End: Original strand, 37024626 - 37024668
Alignment:
Q  88 ttgtacgcagtcttaccctgttttacacacgaggctgtttcca 130  Q
    |||||||||| |||||||||||||||||| |||||||||||||    
T  37024626 ttgtacgcagccttaccctgttttacacaagaggctgtttcca 37024668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 16957450 - 16957374
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtac 93  Q
    ||||||||||||||||| |||| |||  ||||||| |||| ||||||||| ||||| |||||||||  ||||||||||    
T  16957450 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa-ggggtcccaccatttggtgtattgtac 16957374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 16880647 - 16880757
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--ttttaca 114  Q
    |||||| ||||||||| |||| |||  ||||||| |||  |||||||||| || |  ||||||||  |||||||||||||| |||||||||  |||||||    
T  16880647 aaagggaaacccggtgcactaaagctcccgcatacgcatggtccgggaagtgg-tcacaccatttggtgtattgtacgcagccttaccctgttttttaca 16880745  T
Q  115 cacgaggctgtt 126  Q
    || |||||||||    
T  16880746 caagaggctgtt 16880757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 22861668 - 22861766
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacac 115  Q
    ||||||||||  ||||| ||||||||  |||||||||||| || || ||| ||||| ||||||||| |||||||||  ||||||||| | ||||||||||    
T  22861668 aaaagggcaattcggtgcactagagctcccgcatatgcagggttcgagaa-ggggtcccaccatttgatgtattgtgagcagtctta-cttgttttacac 22861765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 30877564 - 30877616
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggg 69  Q
    |||||||||||||||| ||||||||  || ||||||||| |||||||||||||    
T  30877564 aaagggcaacccggtgcactagagctcccacatatgcagggtccgggaagggg 30877616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 19142970 - 19143056
Alignment:
Q  44 ccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttacacacgaggctgtttcca 130  Q
    ||||||| |||  ||||||||||||| | |||||||||  |||| ||||||||| ||||||||| ||||||||| |||| ||||||||    
T  19142970 ccgcatacgcatggtccgggaagggg-tcccaccatttggtgtactgtacgcagccttaccctgtttttacacaagaggttgtttcca 19143056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 43574714 - 43574648
Alignment:
Q  44 ccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    ||||||| |||| ||||||||||||| | |||||||||  | |||||||||||| |||||||||||||    
T  43574714 ccgcatacgcagggtccgggaagggg-tcccaccatttggtatattgtacgcagccttaccctgtttt 43574648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 20135740 - 20135625
Alignment:
Q  18 aagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatt--taatgtattgtacgcagtcttaccctg--ttttac 113  Q
    ||||||||||||||| |||  |||  | |||||||| | ||||||||||||| | ||||||||  |  |||||||||||||| |||||| ||  ||||||    
T  20135740 aagggcaacccggtgcactgaagctcctgcatatgcggggtccgggaagggg-tcccaccattattggtgtattgtacgcagccttaccttgttttttac 20135642  T
Q  114 acacgaggctgtttcca 130  Q
    ||| |||||||||||||    
T  20135641 acaagaggctgtttcca 20135625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 128
Target Start/End: Complemental strand, 2838886 - 2838802
Alignment:
Q  44 ccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttacacacgaggctgtttc 128  Q
    ||||||| |||| ||||| ||||||  | |||||||||  |||||||||||||| ||||||||| ||||||||| || ||||||||    
T  2838886 ccgcatacgcagggtccgagaaggga-tcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagatgctgtttc 2838802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 11462958 - 11462913
Alignment:
Q  19 agggcaacccggtgtactagagcatccgcatatgcagagtccggga 64  Q
    |||||||||||||| ||||||||  ||||||||||||||| |||||    
T  11462958 agggcaacccggtgcactagagctcccgcatatgcagagttcggga 11462913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 7097787 - 7097870
Alignment:
Q  44 ccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttacacacgaggctgttt 127  Q
    ||||||| |||| || ||||||||||  || |||||||  |||||||||||||  ||||||||| ||||||||| ||||||||||    
T  7097787 ccgcatacgcagggttcgggaaggggtctc-accatttggtgtattgtacgcaaccttaccctgtttttacacaagaggctgttt 7097870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 11054145 - 11054257
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttac 113  Q
    ||||||||||||||||||| ||||||||  |||||||||||| ||||||||||||| |||| ||||||  ||||||||||||||||||||||||||||||    
T  11054145 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaagggg-ttccgccatttggtgtattgtacgcagtcttaccctgttttac 11054243  T
Q  114 acacgaggctgttt 127  Q
    ||| ||| ||||||    
T  11054244 acaagagactgttt 11054257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 20225117 - 20225005
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacaca 116  Q
    |||||||||||||||| ||||||||  |||||||||||| ||||||||||||| | |||||||||  |||||||||||||| ||||||||||||||||||    
T  20225117 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgttttacaca 20225019  T
Q  117 cgaggctgtttcca 130  Q
     |||| ||||||||    
T  20225018 agaggttgtttcca 20225005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 47528527 - 47528642
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttac 113  Q
    ||||||||||||||||||| ||||||||  || ||||| ||| ||||||||||||| | |||||||||  |||||||||||||| |||||||||||||||    
T  47528527 aaaaaagggcaacccggtgcactagagctcccacatattcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgttttac 47528625  T
Q  114 acacgaggctgtttcca 130  Q
    ||| |||||||||||||    
T  47528626 acaagaggctgtttcca 47528642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 48598823 - 48598937
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttaca 114  Q
    |||||||||||||||||| ||||||||  | |||||||||  ||||||||||||| | |||||||||  |||||||||||||| ||||||||||||||||    
T  48598823 aaaaagggcaacccggtgcactagagctccggcatatgcatggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgttttaca 48598921  T
Q  115 cacgaggctgtttcca 130  Q
    || |||||||||||||    
T  48598922 caagaggctgtttcca 48598937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 9832311 - 9832422
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttaca 114  Q
    |||||||||||||||||| |||||||   | |||||||||| ||||||||||||| | |||||||||  |||||||||||||| ||||||||||||||||    
T  9832311 aaaaagggcaacccggtgcactagagttcctgcatatgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgttttaca 9832409  T
Q  115 cacgaggctgttt 127  Q
    || ||||||||||    
T  9832410 caagaggctgttt 9832422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 29207900 - 29208002
Alignment:
Q  19 agggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacacacg 118  Q
    |||||||||||||| ||||||||  |||||||||||| ||||||||||||| | |||||||||  |||||||||||||| |||||||||||||||||| |    
T  29207900 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgttttacacaag 29207998  T
Q  119 aggc 122  Q
    ||||    
T  29207999 aggc 29208002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 16408598 - 16408717
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctg--tt 109  Q
    ||||||||||||||||||| |||| |||  |||||||||| | ||||||||| |||||||||||||  ||  ||||||||||||||||||||||||  ||    
T  16408598 aaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaa-ggggttccaccattattggtgtattgtacgcagtcttaccctgtttt 16408696  T
Q  110 ttacacacgaggctgtttcca 130  Q
    ||||||| |||||||||||||    
T  16408697 ttacacaagaggctgtttcca 16408717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 30639517 - 30639401
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-tttta 112  Q
    ||||||||||||||| ||| |||| |||  |||||||||||| ||||||||| |||||  ||||||||  |||||||||||||| ||||||||| |||||    
T  30639517 aaaaaagggcaacccagtgcactaaagctcccgcatatgcagggtccgggaa-ggggtctcaccatttggtgtattgtacgcagccttaccctgttttta 30639419  T
Q  113 cacacgaggctgtttcca 130  Q
    |||| ||| |||||||||    
T  30639418 cacaagagtctgtttcca 30639401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 5648395 - 5648280
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttac 113  Q
    |||||||||||||| ||| |||  |||  ||||||| |||| ||||||||||||| | |||||||||  |||||||||||||| ||||||||| ||||||    
T  5648395 aaaaagggcaacccagtgcactgaagctcccgcatacgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgtttttac 5648297  T
Q  114 acacgaggctgtttcca 130  Q
    ||| |||||||||||||    
T  5648296 acaagaggctgtttcca 5648280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 20639655 - 20639773
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccacca-tttaatgtattgtacgcagtcttaccctg--ttt 110  Q
    ||||||||||||||||||| |||| |||  ||||||| |||| ||||||||| ||||| |||||| |||  |||||||||||||| |||||||||  |||    
T  20639655 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa-ggggtcccaccattttggtgtattgtacgcagccttaccctgttttt 20639753  T
Q  111 tacacacgaggctgtttcca 130  Q
    |||||| |||||||||||||    
T  20639754 tacacaagaggctgtttcca 20639773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 54175202 - 54175088
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccacca-tttaatgtattgtacgcagtcttaccctg-tttta 112  Q
    |||||||||| ||||||| |||| |||  |||||||||||| ||||||| | ||||| |||||| |||  |||||||||||||| ||||||||| |||||    
T  54175202 aaaaagggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttta 54175103  T
Q  113 cacacgaggctgttt 127  Q
    |||| ||||||||||    
T  54175102 cacaagaggctgttt 54175088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 6430627 - 6430739
Alignment:
Q  18 aagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttacaca 116  Q
    |||||||||||||||  ||| |||  ||||||| |||| |||||||||| || | |||||||||  |||||||||||||| ||||||||| |||||||||    
T  6430627 aagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtgg-tcccaccatttggtgtattgtacgcagccttaccctgtttttacaca 6430725  T
Q  117 cgaggctgtttcca 130  Q
     |||||||||||||    
T  6430726 agaggctgtttcca 6430739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 8473621 - 8473734
Alignment:
Q  18 aagggcaacccggtgtactagagcatccgcatatgcagag-tccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacaca 116  Q
    ||||||||||||||| |||| |||  |||||||||||| | |||||| | ||||| |||||||||  ||||||||| |||| |||||||||||  |||||    
T  8473621 aagggcaacccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccaccatttggtgtattgtatgcagccttaccctgttaaacaca 8473720  T
Q  117 cgaggctgtttcca 130  Q
     |||||||||||||    
T  8473721 agaggctgtttcca 8473734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 39077793 - 39077908
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttac 113  Q
    |||||| |||||||||||| ||||||||  |||||||||||| |||||| |||  |  || |||||||  | |||||||||||  |||||||||||||||    
T  39077793 aaaaaaaggcaacccggtgcactagagctcccgcatatgcagggtccggaaagatgtctc-accatttggtatattgtacgcaaccttaccctgttttac 39077891  T
Q  114 acacgaggctgtttcca 130  Q
    ||| |||||||||||||    
T  39077892 acaagaggctgtttcca 39077908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 47444095 - 47443978
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--tttt 111  Q
    ||||||||||||||| ||| |||  |||  | |||||||||| ||||||||||||| | |||||||||  |||||||||||||| |||||||||  ||||    
T  47444095 aaaaaagggcaacccagtgcactgaagctcctgcatatgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgtttttt 47443997  T
Q  112 acacacgaggctgtttcca 130  Q
    || || |||||||||||||    
T  47443996 acgcaagaggctgtttcca 47443978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 25629186 - 25629070
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccc--tgtttta 112  Q
    |||||||||||||||||| |||| |||  ||||||||| || ||||||||| ||||| |||||||||  |||||||||| ||| |||||||  | |||||    
T  25629186 aaaaagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaa-ggggtcccaccatttggtgtattgtacacagccttaccctatttttta 25629088  T
Q  113 cacacgaggctgtttcca 130  Q
    |||| ||| |||||||||    
T  25629087 cacaagagactgtttcca 25629070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 10277755 - 10277867
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttaca 114  Q
    ||||||||||| |||||  |||||| |  |||||||||||| ||| ||||||||| ||| |||||||  |||||||||||||| |||| ||| ||||| |    
T  10277755 aaaaagggcaatccggttcactagaactcccgcatatgcagggtctgggaaggggtttc-accatttggtgtattgtacgcagccttatcctattttata 10277853  T
Q  115 cacgaggctgtttc 128  Q
    || |||||||||||    
T  10277854 caagaggctgtttc 10277867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 23501927 - 23501813
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctg--tt 109  Q
    ||||||||||||||||||| |||| |||  |||||||||||| ||||||||| ||||| |||||||  ||  |||||||||||||  |||||||||  ||    
T  23501927 aaaaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaa-ggggtcccaccattattggtgtattgtacgcaaccttaccctgtttt 23501829  T
Q  110 ttacacacgaggctgt 125  Q
    ||||||| ||||||||    
T  23501828 ttacacaagaggctgt 23501813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 17043423 - 17043508
Alignment:
Q  46 gcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--ttttacacacgaggctgtttcca 130  Q
    |||||||||| ||| ||||||||| | |||||||||  |||||||||||||| |||||||||  ||||||||| |||||||||||||    
T  17043423 gcatatgcagggtctgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttcca 17043508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 38786747 - 38786692
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggg 69  Q
    ||||||||||||||||||| ||||||||  |||||||||||| |||||||||||||    
T  38786747 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaagggg 38786692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 40915962 - 40915850
Alignment:
Q  18 aagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttacaca 116  Q
    |||||||| |||||| |||  |||  ||||||| |||| ||||||||||||  | |||||||||  |||||||||||||| |||||| || |||||||||    
T  40915962 aagggcaatccggtgcactgaagctcccgcatacgcagggtccgggaagggc-tcccaccatttggtgtattgtacgcagccttaccttgtttttacaca 40915864  T
Q  117 cgaggctgtttcca 130  Q
     |||||||||||||    
T  40915863 agaggctgtttcca 40915850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 5306694 - 5306777
Alignment:
Q  47 catatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttacacacgaggctgtttcca 130  Q
    |||| |||| ||||||||||||| | |||||||||  |||||||||||||  ||||||||| ||||||||| |||||||||||||    
T  5306694 catacgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcaaccttaccctgattttacacaagaggctgtttcca 5306777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 35567310 - 35567188
Alignment:
Q  12 ttaaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--tt 109  Q
    ||||||||||||| ||||||| |||| |||  ||||| | |||| || |||||| ||||| |||||||||  ||| |||||| ||| |||||||||  ||    
T  35567310 ttaaaaaagggcagcccggtgcactaaagctcccgcagacgcagggttcgggaa-ggggtcccaccatttggtgtgttgtacacagccttaccctgtttt 35567212  T
Q  110 ttacacacgaggctgtttccaaga 133  Q
    ||||||| | ||||||||||||||    
T  35567211 ttacacaagtggctgtttccaaga 35567188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 20405224 - 20405109
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatt--taatgtattgtacgcagtcttaccctg---tttt 111  Q
    ||||||||||||  || |||| |||  |||||||||| | ||||||||||||| | ||||||||  || ||||||||||||| ||||||||||   ||||    
T  20405224 aaagggcaacccaatgcactaaagctcccgcatatgcggggtccgggaagggg-tcccaccattattagtgtattgtacgcaatcttaccctgttttttt 20405126  T
Q  112 acacacgaggctgtttc 128  Q
    ||||| |||||||||||    
T  20405125 acacaagaggctgtttc 20405109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 32484371 - 32484316
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggg 69  Q
    ||||||||||||||||||| |||| |||  |||||||||||| |||||||||||||    
T  32484371 aaaaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaagggg 32484316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 49796905 - 49796819
Alignment:
Q  44 ccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttt-acacacgaggctgtttcca 130  Q
    ||||||| |||| || |||||||||| | |||||||||  |||||||||||||| |||||| |||||| ||||| |||||||||||||    
T  49796905 ccgcatacgcagggttcgggaagggg-tcccaccatttggtgtattgtacgcagccttaccatgttttaacacaagaggctgtttcca 49796819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 20225211 - 20225119
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctgt 108  Q
    |||||||||||||||| |||| |||  |||||||||| | ||||||||| ||||| |||||||  ||  |||||||||||||| ||||||||||    
T  20225211 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaa-ggggtcccaccattattggtgtattgtacgcagccttaccctgt 20225119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 55766466 - 55766558
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttt 110  Q
    |||||||| ||||||| |||| |||   |||||| |||  |||||||| |||| |||||||||| | |||||||||||||| ||||||||||||    
T  55766466 aaagggcatcccggtgcactaaagctctcgcatacgcaaggtccgggatgggg-ttccaccattcagtgtattgtacgcagccttaccctgttt 55766558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 14983970 - 14983852
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccc--tgttttac 113  Q
    |||||||||||  |||  |||| |||  ||||||| |||| ||||||||| ||||| |||||||||| ||||||||| |||  |||||||  | ||||||    
T  14983970 aaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaa-ggggtcccaccatttagtgtattgtaggcaaccttaccctattttttac 14983872  T
Q  114 acacgaggctgtttccaaga 133  Q
    ||| ||||||||||| ||||    
T  14983871 acaagaggctgtttcaaaga 14983852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 44363130 - 44363243
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccacca--tttaatgtattgtacgcagtcttaccctg--tttta 112  Q
    |||||||||||||||| |||| |||  ||||||| |||| ||||||||| ||||| ||||||  |||  ||  |||||||||| | |||||||  |||||    
T  44363130 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa-ggggtcccaccatttttggtgcgttgtacgcagccctaccctgtttttta 44363228  T
Q  113 cacacgaggctgttt 127  Q
    |||||||||||||||    
T  44363229 cacacgaggctgttt 44363243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 7909308 - 7909394
Alignment:
Q  44 ccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttacacacgaggctgtttcca 130  Q
    ||||||| |||| || |||||||||| | |||||||||  |||||||||||||  ||||||||| ||||||||| ||| |||||||||    
T  7909308 ccgcatacgcagggttcgggaagggg-tcccaccatttggtgtattgtacgcaaccttaccctgtttttacacaagagactgtttcca 7909394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 16911700 - 16911585
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctg--tttt 111  Q
    ||||||||||||||||  |||| |||  |||| || |||| ||||||||| ||||| |||||||  ||  |||||||||||||| |||||||||  || |    
T  16911700 aaaagggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaa-ggggtcccaccattattggtgtattgtacgcagccttaccctgatttgt 16911602  T
Q  112 acacacgaggctgtttc 128  Q
    ||||| |||||||||||    
T  16911601 acacaagaggctgtttc 16911585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 30690176 - 30690269
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    |||||||| || |||| |||| |||  ||||||| |||| ||||||||| ||||| |||||| ||  ||||||||| |||| |||||||||||||    
T  30690176 aaagggcagcctggtgcactaaagctcccgcatacgcagggtccgggaa-ggggtcccaccaattggtgtattgtatgcagccttaccctgtttt 30690269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 51865065 - 51865149
Alignment:
Q  44 ccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--ttttacacacgaggctgttt 127  Q
    ||||||| |||| |||||||||||||   |||||||||  |||||||||||||| |||||| ||  ||||||||| ||||||||||    
T  51865065 ccgcatacgcagggtccgggaaggggcc-ccaccatttggtgtattgtacgcagccttaccatgttttttacacaagaggctgttt 51865149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 35532130 - 35532077
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagg 67  Q
    ||||||||||||||||||| |||| |||  ||||||| |||| |||||||||||    
T  35532130 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 55830770 - 55830835
Alignment:
Q  67 ggggttccaccatttaatgtattgtacgcagtcttaccctgttt-tacacacgaggctgtttccaa 131  Q
    |||||||||||||| | ||||||||||||||  |||||||||||  ||||| ||| ||||||||||    
T  55830770 ggggttccaccattcagtgtattgtacgcagcattaccctgtttacacacaagagactgtttccaa 55830835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 130
Target Start/End: Complemental strand, 21647098 - 21646985
Alignment:
Q  20 gggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatt--taatgtattgtacgcagtcttaccctgtttt--acac 115  Q
    ||||||||||||| |||| |||  |||||||||| | ||| ||||||||| | ||||||||  |  | |||||||||||| |||||||| ||||  ||||    
T  21647098 gggcaacccggtgcactaaagctcccgcatatgcggggtctgggaagggg-tcccaccattattggtatattgtacgcagccttaccctattttttacac 21647000  T
Q  116 acgaggctgtttcca 130  Q
    | |||||||||||||    
T  21646999 aagaggctgtttcca 21646985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 38755908 - 38755960
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggg 69  Q
    |||||||||||||||| |||| |||  ||||||| |||| |||||||||||||    
T  38755908 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagggg 38755960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 39029087 - 39029177
Alignment:
Q  44 ccgcatatgcagagtccgggaagggggttccaccatttaa-tgtattgtacgcagtcttaccctgtttt--acacacgaggctgtttccaag 132  Q
    |||||||||||| |||||| ||| || | |||||||||   |||||||||| ||| |||||||||||||  ||||| |||||||||||||||    
T  39029087 ccgcatatgcagggtccggaaagtgg-tcccaccattttcgtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaag 39029177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 40553937 - 40553989
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggg 69  Q
    |||||||||||||||| |||| |||  ||||||| |||| |||||||||||||    
T  40553937 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagggg 40553989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 6e-31; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 12670247 - 12670362
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttac 113  Q
    ||||||||| ||||||||| ||||||||  |||||||||||| ||||||||||||| | |||||||||  |||||||||||||| |||||||||||||||    
T  12670247 aaaaaagggtaacccggtgcactagagctcccgcatatgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgttttac 12670345  T
Q  114 acacgaggctgtttcca 130  Q
    ||| |||||||||||||    
T  12670346 acaagaggctgtttcca 12670362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 30454094 - 30454209
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttac 113  Q
    ||||||||||||||||||| ||||||||  |||||||||||| ||||||||| ||||| |||||||||  ||||| |||||||| |||||| ||||||||    
T  30454094 aaaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaa-ggggtcccaccatttggtgtatcgtacgcagccttaccttgttttac 30454192  T
Q  114 acacgaggctgtttcca 130  Q
    ||| |||||||||||||    
T  30454193 acaagaggctgtttcca 30454209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 36720932 - 36720817
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--ttttac 113  Q
    |||||||||||| |||| |||| ||| |||||||| |||| ||||||||| ||||| |||||||||  |||||||||||||| |||||||||  ||||||    
T  36720932 aaaagggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaa-ggggtcccaccatttggtgtattgtacgcagccttaccctgttttttac 36720834  T
Q  114 acacgaggctgtttcca 130  Q
    ||| |||||||||||||    
T  36720833 acaagaggctgtttcca 36720817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 17823711 - 17823597
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--ttttaca 114  Q
    |||||||||||||||| |||| |||  | |||||||||| || |||||||||| |||||||||||  |||||| |||||||||||| ||||  |||||||    
T  17823711 aaagggcaacccggtgcactaaagctcctgcatatgcagggttcgggaagggg-ttccaccatttggtgtattttacgcagtcttatcctggtttttaca 17823613  T
Q  115 cacgaggctgtttcca 130  Q
    || |||||||||||||    
T  17823612 caagaggctgtttcca 17823597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 12626026 - 12625932
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    ||||||||||||||||| |||| |||  ||||||| |||| |||||||| |||||| |||||||||  ||||||||| ||||||||||||||||||    
T  12626026 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccggga-gggggtcccaccatttggtgtattgtatgcagtcttaccctgtttt 12625932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 19729476 - 19729362
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacac 115  Q
    |||||||||| || ||| ||||||||  ||| |||||||| ||||||||||||| | |||||||||  |||||||||| ||| ||||||||||||||||     
T  19729476 aaaagggcaatccagtgcactagagctcccgtatatgcagggtccgggaagggg-tcccaccatttggtgtattgtacacagccttaccctgttttacat 19729378  T
Q  116 acgaggctgtttccaa 131  Q
    | ||| ||||||||||    
T  19729377 aagagactgtttccaa 19729362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 28817624 - 28817740
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--tttta 112  Q
    ||||||||||||||| || |||| |||  ||||||| |||| ||||||||| ||||| ||||||||   |||||||||||||| |||||||||  |||||    
T  28817624 aaaaagggcaacccgatgcactaaagctcccgcatacgcagggtccgggaa-ggggtcccaccattgggtgtattgtacgcagccttaccctgtttttta 28817722  T
Q  113 cacacgaggctgtttcca 130  Q
    |||| |||||||||||||    
T  28817723 cacaagaggctgtttcca 28817740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 35261819 - 35261700
Alignment:
Q  12 ttaaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--tt 109  Q
    ||||||||||||||||||||| |||| |||  ||||||| |||| |||| |||| ||||| |||||||||  |||||||||||||  |||||||||  ||    
T  35261819 ttaaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaa-ggggtcccaccatttggtgtattgtacgcaaccttaccctgtttt 35261721  T
Q  110 ttacacacgaggctgtttcca 130  Q
    ||||||| ||| |||||||||    
T  35261720 ttacacaagagactgtttcca 35261700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 45071398 - 45071286
Alignment:
Q  18 aagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttacaca 116  Q
    ||||||||||||||| |||  |||  ||||||| |||  ||||||||||||| | |||||||||  |||||||||||||| ||||||||| |||||||||    
T  45071398 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgtttttacaca 45071300  T
Q  117 cgaggctgtttcca 130  Q
     |||||||||||||    
T  45071299 agaggctgtttcca 45071286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 13160836 - 13160725
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttacac 115  Q
    |||||||||||||| | |||  |||  ||||||| |||| ||||||||||||| | |||||||||  |||||||||||||| ||||||||| ||||||||    
T  13160836 aaagggcaacccggcgcactgaagctcccgcatacgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgtttttacac 13160738  T
Q  116 acgaggctgtttc 128  Q
    | |||||||||||    
T  13160737 aagaggctgtttc 13160725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 44530285 - 44530167
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--ttttac 113  Q
    |||||| |||||||||| |||| |||  ||||||| |||| |||| |||||||| | |||||||||  |||||||||||||| |||||||||  ||||||    
T  44530285 aaaaggtcaacccggtgcactaaagctcccgcatacgcagggtccaggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgttttttac 44530187  T
Q  114 acacgaggctgtttccaaga 133  Q
    ||| |||| |||||||||||    
T  44530186 acaagaggttgtttccaaga 44530167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 6760962 - 6760843
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctg--tt 109  Q
    ||||||||||||||||||| |||| |||  |||||||||| | ||||| ||| ||||| |||||||  ||  ||||||||||| || |||||||||  ||    
T  6760962 aaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgagaa-ggggtcccaccattattggtgtattgtacgaagccttaccctgtttt 6760864  T
Q  110 ttacacacgaggctgtttcca 130  Q
    ||||||| |||||||||||||    
T  6760863 ttacacaagaggctgtttcca 6760843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 7136524 - 7136643
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctg--tt 109  Q
    ||||||||| ||||||||| |||| |||  |||||||||| | ||||||||| ||||| |||||||  ||  |||||||||||||| |||||||||  ||    
T  7136524 aaaaaagggtaacccggtgcactaaagctcccgcatatgcggggtccgggaa-ggggtcccaccattattggtgtattgtacgcagccttaccctggttt 7136622  T
Q  110 ttacacacgaggctgtttcca 130  Q
    ||||||| |||| ||||||||    
T  7136623 ttacacaagaggttgtttcca 7136643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 20870063 - 20869944
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctg--tt 109  Q
    ||||||||||||||||||| |||| |||  |||||||||| | |||| |||| ||||| |||||||  ||  |||||||||||||| |||||||||  ||    
T  20870063 aaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtcctggaa-ggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 20869965  T
Q  110 ttacacacgaggctgtttcca 130  Q
    ||||||| ||| |||||||||    
T  20869964 ttacacaagagactgtttcca 20869944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 26102655 - 26102578
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgta 92  Q
    ||||||||||||||||||| ||||||||  ||||||| |||| ||||||||| ||||| |||||||||  |||||||||    
T  26102655 aaaaaagggcaacccggtgcactagagctcccgcataagcagggtccgggaa-ggggtcccaccatttggtgtattgta 26102578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 8897761 - 8897857
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    |||||||||||||| |||| | || |||  |||||||||||| ||||||||| ||||| |||||||||  ||||||||||| || |||||||| ||||    
T  8897761 aaaaaagggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaa-ggggtcccaccatttggtgtattgtacgtagccttaccctatttt 8897857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 29877202 - 29877115
Alignment:
Q  44 ccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--ttttacacacgaggctgtttcca 130  Q
    ||||||| |||| ||||||||||||| | |||||||||  |||||||||||||| |||||||||  |||||||||  ||||||||||||    
T  29877202 ccgcatacgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgttttttacacaaaaggctgtttcca 29877115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 39460993 - 39461110
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatt--taatgtattgtacgcagtcttaccctg--tttt 111  Q
    ||||||||||||||||| |||| |||  ||||||| |||| |||||||||||||  || ||||||  |  |||||||||||||| ||||| |||  ||||    
T  39460993 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctc-accattattggtgtattgtacgcagccttactctgtttttt 39461091  T
Q  112 acacacgaggctgtttcca 130  Q
    ||||| |||||||||||||    
T  39461092 acacaagaggctgtttcca 39461110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 2626630 - 2626564
Alignment:
Q  44 ccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    |||||||||||| ||| ||||||||| | ||| |||||  ||||||||||||||||||||||||||||    
T  2626630 ccgcatatgcagggtctgggaagggg-tcccatcatttggtgtattgtacgcagtcttaccctgtttt 2626564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 20869527 - 20869610
Alignment:
Q  44 ccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacacacgaggctgtttcca 130  Q
    |||||||||||| |||||||||||||  || |||  ||  |||||||||| ||| |||||||||||||||||| |||||||||||||    
T  20869527 ccgcatatgcagggtccgggaaggggtctc-acc--ttggtgtattgtacacagccttaccctgttttacacaagaggctgtttcca 20869610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 5689717 - 5689649
Alignment:
Q  67 ggggttccaccatttaatgtattgtacgcagtcttaccctg--ttttacacacgaggctgtttccaaga 133  Q
    |||||||||||||||  |||||||||||||| |||||||||  ||||||||| |||||| ||| |||||    
T  5689717 ggggttccaccatttggtgtattgtacgcagccttaccctgctttttacacaagaggctatttacaaga 5689649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 16225156 - 16225061
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatt--taatgtattgtacgcagtcttaccctgtttt 111  Q
    ||||| |||||||||| |||| |||  |||||||||| | ||||||||||||  | ||||||||  |  ||||||||||||||||||||||||||||    
T  16225156 aaaggacaacccggtgcactaaagctcccgcatatgcggggtccgggaaggga-tcccaccattattggtgtattgtacgcagtcttaccctgtttt 16225061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 23286375 - 23286432
Alignment:
Q  68 gggttccaccatttaatgtattgtacgcagtcttaccctgttttacacacgaggctgt 125  Q
    |||| |||||||||  ||||||||||||||  ||||||||||||||||| ||||||||    
T  23286375 gggtcccaccatttggtgtattgtacgcagctttaccctgttttacacaagaggctgt 23286432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 29521685 - 29521799
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--ttttaca 114  Q
    |||| ||||||||||| |||| |||  ||||||| |||| ||| |||| |||  | |||||||||  |||||||||||||| |||||||||  ||||| |    
T  29521685 aaagagcaacccggtgcactaaagctcccgcatacgcagggtctgggatgggt-tcccaccatttggtgtattgtacgcagccttaccctgttttttaaa 29521783  T
Q  115 cacgaggctgtttcca 130  Q
    || |||||||||||||    
T  29521784 caagaggctgtttcca 29521799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 5135318 - 5135403
Alignment:
Q  46 gcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttt--acacacgaggctgtttcca 130  Q
    ||||| |||| ||||||||||||| | |||||||||  |||||||||| ||| |||||||| ||||  ||||| |||||||||||||    
T  5135318 gcatacgcagggtccgggaagggg-tcccaccatttggtgtattgtacacagccttaccctcttttttacacaagaggctgtttcca 5135403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 35107310 - 35107376
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaa 83  Q
    ||||||||||||||||| |||| ||| ||||||||  ||| ||||||||| ||||| |||||||||||    
T  35107310 aaaagggcaacccggtgcactaaagcttccgcatacacagcgtccgggaa-ggggtcccaccatttaa 35107376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 133
Target Start/End: Original strand, 14018029 - 14018086
Alignment:
Q  78 atttaatgtattgtacgcagtcttaccctg--ttttacacacgaggctgtttccaaga 133  Q
    ||||| ||||||||||||||||| ||||||  ||||||||| ||| ||||||||||||    
T  14018029 atttagtgtattgtacgcagtctcaccctgttttttacacaagagactgtttccaaga 14018086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 24365089 - 24365172
Alignment:
Q  47 catatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg---ttttacacacgaggctgtttc 128  Q
    |||| |||| ||||||||||||| | |||||||||  |||||||| ||||| |||||||||   ||||||||| |||||||||||    
T  24365089 catacgcagggtccgggaagggg-tcccaccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgtttc 24365172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 26954271 - 26954153
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatt--taatgtattgtacgcagtcttaccctg---ttt 110  Q
    ||||||||||||| ||| |||| |||  ||||||||||   ||| ||||||||| | ||||||||  |  |||||||||||||| |||||||||   |||    
T  26954271 aaaagggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaagggg-tcccaccattattggtgtattgtacgcagccttaccctgtttttt 26954173  T
Q  111 tacacacgaggctgtttcca 130  Q
    |||||| |||||||||||||    
T  26954172 tacacaagaggctgtttcca 26954153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 31457308 - 31457228
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcag 97  Q
    |||||||||| |||||| ||||||||  ||||||| |||| ||  ||||||||| | | ||||||| |||||||||||||||    
T  31457308 aaaagggcaatccggtgcactagagctcccgcatacgcagggtttgggaagggg-tcctaccatttgatgtattgtacgcag 31457228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 10857966 - 10857871
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    |||||||||||||||||| |||| |||  ||||||| |||  |||| ||||| || | |||||| ||  |||||||| ||||| |||||||||||||    
T  10857966 aaaaagggcaacccggtgcactaaagctcccgcatacgcaaggtccaggaagtgg-tcccaccaattggtgtattgtgcgcagccttaccctgtttt 10857871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 27468089 - 27468141
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaag 66  Q
    ||||||||||||||||||| |||| |||  ||||||| |||| ||||||||||    
T  27468089 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaag 27468141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 30714 - 30600
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttaca 114  Q
    |||||||||||||||||| ||||||||  |||||||||||| ||||||||||||| | |||||||||  |||||||||||||| | ||||||||||||||    
T  30714 aaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccctaccctgttttaca 30616  T
Q  115 cacgaggctgtttcca 130  Q
    || |||||||||||||    
T  30615 caagaggctgtttcca 30600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 1217247 - 1217133
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttaca 114  Q
    |||||||||||||||||| ||||||||  |||||||||||| ||||||||||||| | || ||||||  |||||||||||||| ||||||||||||||||    
T  1217247 aaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaagggg-tcccgccatttggtgtattgtacgcagccttaccctgttttaca 1217149  T
Q  115 cacgaggctgtttcca 130  Q
    || |||||||||||||    
T  1217148 caagaggctgtttcca 1217133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 31593004 - 31592892
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacaca 116  Q
    |||||||||||||||| ||||||||  |||||||||||| ||||||||||| | | |||||||||  |||||||||||||| ||||||||||||||||||    
T  31593004 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggag-tcccaccatttggtgtattgtacgcagccttaccctgttttacaca 31592906  T
Q  117 cgaggctgtttcca 130  Q
     |||||||||||||    
T  31592905 agaggctgtttcca 31592892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 15797381 - 15797271
Alignment:
Q  13 taaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttta 112  Q
    |||||||||||||||||||| ||||||||  || ||||||||| ||||||||||||| | |||||||||  |||||||||||||| ||||||||||||||    
T  15797381 taaaaaagggcaacccggtgcactagagctcccacatatgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgtttta 15797283  T
Q  113 cacacgaggctg 124  Q
    |||| |||||||    
T  15797282 cacaagaggctg 15797271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 22122918 - 22123029
Alignment:
Q  18 aagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacacac 117  Q
    ||||||||||||||| ||||||||   ||||||||||| ||||||||||||| | |||||||||  |||||||||||||| ||||||||||||||||||     
T  22122918 aagggcaacccggtgcactagagctctcgcatatgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgttttacacaa 22123016  T
Q  118 gaggctgtttcca 130  Q
    ||| |||||||||    
T  22123017 gagactgtttcca 22123029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 115
Target Start/End: Original strand, 34771362 - 34771461
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttaca 114  Q
    |||||||||| ||||||| ||||||||  |||||||||||| ||||||||| ||||| |||||||||  |||||||||||||| ||||||||||||||||    
T  34771362 aaaaagggcagcccggtgcactagagctcccgcatatgcagggtccgggaa-ggggtcccaccatttggtgtattgtacgcagccttaccctgttttaca 34771460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 39203671 - 39203561
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacaca 116  Q
    |||||||||||||||| |||| |||  |||||||||||  ||||||||||||| | |||||||||  |||||||||||||  ||||||||||||||||||    
T  39203671 aaagggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaagggg-tcccaccatttggtgtattgtacgcaaccttaccctgttttacaca 39203573  T
Q  117 cgaggctgtttc 128  Q
     |||||||||||    
T  39203572 agaggctgtttc 39203561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 40272808 - 40272926
Alignment:
Q  13 taaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--ttt 110  Q
    |||||||||||||||||||| |||| |||  ||||||| |||| ||||||||| ||||| |||||||||  |||||||||||||| |||||||||  |||    
T  40272808 taaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa-ggggtcccaccatttggtgtattgtacgcagccttaccctgttttt 40272906  T
Q  111 tacacacgaggctgtttcca 130  Q
    |||||| |||| ||||||||    
T  40272907 tacacaagaggttgtttcca 40272926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 22609921 - 22609806
Alignment:
Q  18 aagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttacaca 116  Q
    ||||||||||||||| |||  |||  ||||||| |||  ||||||||||||| | |||||||||  |||||||||||||| ||||||||| |||||||||    
T  22609921 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgtttttacaca 22609823  T
Q  117 cgaggctgtttccaaga 133  Q
     ||||||||||||||||    
T  22609822 agaggctgtttccaaga 22609806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 54484850 - 54484733
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg---tttt 111  Q
    |||||||||||||||||| |||| |||  ||||||| |||| ||||||||| ||||| |||||||||  |||||||||||||| |||||| ||   ||||    
T  54484850 aaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa-ggggtcccaccatttggtgtattgtacgcagccttaccttgttttttt 54484752  T
Q  112 acacacgaggctgtttcca 130  Q
    ||||| |||||||||||||    
T  54484751 acacaagaggctgtttcca 54484733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 7696893 - 7696999
Alignment:
Q  18 aagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacacac 117  Q
    ||||| ||||||||| ||||||||  || ||||||||| |||||||||||||      ||||||  |||||||||||||| ||||||||||||||||||     
T  7696893 aagggaaacccggtgcactagagctcccacatatgcagtgtccgggaagggg------ccatttggtgtattgtacgcagccttaccctgttttacacaa 7696986  T
Q  118 gaggctgtttcca 130  Q
    ||| |||||||||    
T  7696987 gagactgtttcca 7696999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 49013468 - 49013590
Alignment:
Q  12 ttaaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctg-- 107  Q
    ||||||||||||||||||||| |||| |||  |||| ||||| | ||||||||| ||||| |||||||  ||  |||||||||||||| |||||||||      
T  49013468 ttaaaaaagggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaa-ggggtcccaccattattggtgtattgtacgcagccttaccctgtt 49013566  T
Q  108 ttttacacacgaggctgtttccaa 131  Q
    ||||||||| ||||||||||||||    
T  49013567 ttttacacaagaggctgtttccaa 49013590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 13628789 - 13628906
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctgtt--tt 111  Q
    ||||||||||||||||| |||| |||  ||||||| |||| ||||||||| ||||| |||||||  ||  |||||||||||||| |||||||||||  ||    
T  13628789 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa-ggggtcccaccattattggtgtattgtacgcagccttaccctgtttctt 13628887  T
Q  112 acacacgaggctgtttcca 130  Q
    ||||| |||||||||||||    
T  13628888 acacaagaggctgtttcca 13628906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 13730599 - 13730718
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctg--tt 109  Q
    ||||||||||||||||||| |||| |||  |||||||||| | ||||||||| ||||| |||||||  ||  |||||||||| ||| |||||||||  ||    
T  13730599 aaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaa-ggggtcccaccattattggtgtattgtacacagccttaccctgtttt 13730697  T
Q  110 ttacacacgaggctgtttcca 130  Q
    ||||||| |||||||||||||    
T  13730698 ttacacaagaggctgtttcca 13730718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 128
Target Start/End: Complemental strand, 16735603 - 16735486
Alignment:
Q  11 tttaaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttt 110  Q
    |||| ||||||||||||| ||| |||  |||  ||||||| |||| ||||||||||||| | |||||||||  |||||||||||||| ||||||||||||    
T  16735603 tttataaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgttt 16735505  T
Q  111 tac-acacgaggctgtttc 128  Q
    | | ||| |||||||||||    
T  16735504 ttctacaagaggctgtttc 16735486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 26869866 - 26869750
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-tttta 112  Q
    ||||||||||||||||||| || | |||  ||||||| |||  |||||| |||||| | |||||||||  |||||||||||||| ||||||||| |||||    
T  26869866 aaaaaagggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaagggg-tcccaccatttggtgtattgtacgcagccttaccctgttttta 26869768  T
Q  113 cacacgaggctgtttcca 130  Q
    |||  |||||||||||||    
T  26869767 caccagaggctgtttcca 26869750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 26292489 - 26292382
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttaca 114  Q
    ||||||| |||||||||| |||||||   |||||||||||| || |||||||||  | ||| |||||  ||||| |||||| ||||||||||||||||||    
T  26292489 aaaaaggacaacccggtgcactagagttcccgcatatgcagggttcgggaaggga-tcccatcatttggtgtatcgtacgcggtcttaccctgttttaca 26292391  T
Q  115 cacgaggct 123  Q
    || ||||||    
T  26292390 caagaggct 26292382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 12914034 - 12914149
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--ttttac 113  Q
    ||||||||||||||||| | |  |||  |||||||||||| ||| |||||||||  || |||||||  |||||||||||| | |||||||||  ||||||    
T  12914034 aaaagggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctc-accatttggtgtattgtacgccgccttaccctgttttttac 12914132  T
Q  114 acacgaggctgtttcca 130  Q
    ||| |||||||||||||    
T  12914133 acaagaggctgtttcca 12914149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 30452953 - 30452900
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggg 69  Q
    ||||||||||||||||| ||||||||  |||||||||||| |||||||||||||    
T  30452953 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaagggg 30452900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 31831343 - 31831242
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacaca 116  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||||            |||||||  ||||||||| |||| |||||||| |||||||||    
T  31831343 aaagggcaacccggtgcactagagcacccgcatatgcagggtccgg------------accatttggtgtattgtatgcagccttaccctattttacaca 31831256  T
Q  117 cgaggctgtttcca 130  Q
     |||||||||||||    
T  31831255 agaggctgtttcca 31831242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 353351 - 353444
Alignment:
Q  19 agggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctgtttt 111  Q
    |||||||||||||| |||| |||  |||||||||| | ||||||||| ||||| |||||||  ||  |||||||||||||| |||||||||||||    
T  353351 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaa-ggggtcccaccattattggtgtattgtacgcagccttaccctgtttt 353444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 14987116 - 14987000
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatt--taatgtattgtacgcagtcttaccctg--tttta 112  Q
    |||||| ||||||||| |||| |||  |||||||||||  ||||||||| ||| | ||||||||  |  |||||||||||||| |||||||||  |||||    
T  14987116 aaagggaaacccggtgcactaaagctcccgcatatgcaaggtccgggaatggg-tcccaccattattggtgtattgtacgcagccttaccctgtttttta 14987018  T
Q  113 cacacgaggctgtttcca 130  Q
    |||| |||||||||||||    
T  14987017 cacaagaggctgtttcca 14987000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 46421031 - 46421151
Alignment:
Q  14 aaaaaagggcaacccggtgtact-agagcatccgcatatgcagagtccgggaagggggttccaccatt--taatgtattgtacgcagtcttaccctg--t 108  Q
    |||||||||||| |||||| ||| | |||  ||||||| |||| ||||||||||||| | ||||||||  |  |||||||||||||| |||||||||  |    
T  46421031 aaaaaagggcaaaccggtgcacttaaagctcccgcatacgcagggtccgggaagggg-tcccaccattattggtgtattgtacgcagccttaccctgttt 46421129  T
Q  109 tttacacacgaggctgtttcca 130  Q
    |||||||| |||||||||||||    
T  46421130 tttacacaagaggctgtttcca 46421151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 47624158 - 47624088
Alignment:
Q  57 gtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttacacacgaggctgttt 127  Q
    ||||||||||||| | |||||||||  |||||||||||||| ||||||||| ||||||||| ||||||||||    
T  47624158 gtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttt 47624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 111
Target Start/End: Complemental strand, 7943092 - 7943054
Alignment:
Q  73 ccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  7943092 ccaccatttgatgtattgtacgcagtcttaccctgtttt 7943054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 31904900 - 31904950
Alignment:
Q  61 gggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    ||||||||||| |||||||||  |||||||||||||||| |||||||||||    
T  31904900 gggaagggggtcccaccatttggtgtattgtacgcagtcataccctgtttt 31904950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 103
Target Start/End: Original strand, 52926216 - 52926304
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttac 103  Q
    |||||||||||||||||||  ||| |||  ||||||| |||| ||||||||| || || |||||||||  |||||||||||||| |||||    
T  52926216 aaaaaagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaa-ggtgtcccaccatttggtgtattgtacgcagccttac 52926304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 9276393 - 9276328
Alignment:
Q  44 ccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    ||||||| |||| ||||||||| |||  ||||||||||  |||||||||||||| |||||||||||||    
T  9276393 ccgcatacgcagggtccgggaaaggg--tccaccatttggtgtattgtacgcagccttaccctgtttt 9276328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 26573256 - 26573170
Alignment:
Q  45 cgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--ttttacacacgaggctgtttcca 130  Q
    |||||| |||| |||||||| |||| | |||||| ||  |||||||||||||| |||||||||  ||||||||| |||||||||||||    
T  26573256 cgcatacgcagggtccgggatgggg-tcccaccaattggtgtattgtacgcagccttaccctgttttttacacaggaggctgtttcca 26573170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 29366719 - 29366836
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatt--taatgtattgtacgcagtcttaccctg--tttt 111  Q
    ||||||||||||| ||| |||| |||  || |||| |||| ||||||||||||| | ||||||||  |  |||||||||||||| |||||||||  ||||    
T  29366719 aaaagggcaacccagtgcactaaagctcccacatacgcagggtccgggaagggg-tcccaccattattggtgtattgtacgcagccttaccctgtttttt 29366817  T
Q  112 acacacgaggctgtttcca 130  Q
    | ||| |||||||||||||    
T  29366818 atacaagaggctgtttcca 29366836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 33235640 - 33235596
Alignment:
Q  67 ggggttccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    ||||| |||||||||| |||||||||| |||||||||||||||||    
T  33235640 ggggtcccaccatttagtgtattgtacacagtcttaccctgtttt 33235596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 45786214 - 45786327
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaa--tgtattgtacgcagtcttaccctg--tttta 112  Q
    |||||||||||||||| |||| |||  | ||||  |||| ||||||||||||| | |||||||||    |||||||||||||| |||||||||  |||||    
T  45786214 aaagggcaacccggtgcactaaagctccagcattcgcagggtccgggaagggg-tcccaccatttttggtgtattgtacgcagccttaccctgtttttta 45786312  T
Q  113 cacacgaggctgttt 127  Q
    |||| ||||||||||    
T  45786313 cacaagaggctgttt 45786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 133
Target Start/End: Original strand, 54374341 - 54374463
Alignment:
Q  13 taaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccacca-tttaatgtattgtacgcagtcttaccc--tgtt 109  Q
    ||||||| |||| || |||| |||| |||  |||||||||||| ||||||||| ||||| |||||| |||  || ||||||||||| |||||||  | ||    
T  54374341 taaaaaatggcagcctggtgaactaaagctcccgcatatgcagggtccgggaa-ggggtcccaccattttggtggattgtacgcagccttaccctatttt 54374439  T
Q  110 ttacacacgaggctgtttccaaga 133  Q
    ||||||| |||| |||||||||||    
T  54374440 ttacacaagaggttgtttccaaga 54374463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 516571 - 516452
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatg---tattgtacgcagtcttaccctgtttt 111  Q
    |||||||||||||||||| |||| |||  ||||||| |||| ||| ||||||||| | || ||||||  ||   |||||| ||||| |||||||||||||    
T  516571 aaaaagggcaacccggtgcactaaagctcccgcatacgcagggtcggggaagggg-tcccgccattttttggtttattgtgcgcagccttaccctgtttt 516473  T
Q  112 --acacacgaggctgtttcca 130  Q
      ||||| |||||||||||||    
T  516472 ttacacaagaggctgtttcca 516452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 6411871 - 6411938
Alignment:
Q  67 ggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttacacacgaggctgtttccaaga 133  Q
    ||||| ||| |||||  |||||||||||||| ||||||||| ||||||||| |||||||||| |||||    
T  6411871 ggggtcccatcatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttacaaga 6411938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 10795423 - 10795539
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaa--tgtattgtacgcagtcttaccctg--tttta 112  Q
    ||||||||||| |||| |||  |||  ||||||| |||| |||| |||||||| | |||||||||    |||||||||||||| |||||||||  |||||    
T  10795423 aaagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaagggg-tcccaccatttttggtgtattgtacgcagccttaccctgtctttta 10795521  T
Q  113 cacacgaggctgtttcca 130  Q
    |||| |||||||||||||    
T  10795522 cacaagaggctgtttcca 10795539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 24851298 - 24851353
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggg 69  Q
    ||||||||||||||||||| |||| |||  ||||||||||||  ||||||||||||    
T  24851298 aaaaaagggcaacccggtgcactaaagctcccgcatatgcaggatccgggaagggg 24851353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 52428526 - 52428591
Alignment:
Q  67 ggggttccaccatttaatgtattgtacgcagtcttaccctg--ttttacacacgaggctgtttcca 130  Q
    |||||||||| ||||  |||||||||||||| |||||||||  ||||||||| ||||||| |||||    
T  52428526 ggggttccactatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgcttcca 52428591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 6242282 - 6242331
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccggg 63  Q
    ||||||||||||||||||| ||||||||  | |||||||||| |||||||    
T  6242282 aaaaaagggcaacccggtgcactagagctcctgcatatgcagggtccggg 6242331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 24577997 - 24577917
Alignment:
Q  12 ttaaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtac 93  Q
    |||||||||||||| |||||| ||||||||  ||| |||||||| ||| |||||  || | |||||||||| ||||||||||    
T  24577997 ttaaaaaagggcaatccggtgcactagagctcccgtatatgcagggtctgggaa-aggatcccaccatttagtgtattgtac 24577917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 24578087 - 24578007
Alignment:
Q  12 ttaaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtac 93  Q
    ||||||||||||||||||||| |||||||   ||||||||| || ||| |||||  | || |||||||||| ||||||||||    
T  24578087 ttaaaaaagggcaacccggtgcactagagttcccgcatatgtagggtctgggaa-agagtcccaccatttagtgtattgtac 24578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 25517169 - 25517249
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcag 97  Q
    ||||||||||||||||| |||| |||  | ||||| ||||  |||||||| ||||| |||||||||  ||||||||||||||    
T  25517169 aaaagggcaacccggtgcactaaagctccagcatacgcaggatccgggaa-ggggtcccaccattttgtgtattgtacgcag 25517249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 9671315 - 9671202
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacac 115  Q
    ||||||||||||||||| |||| |||  ||||||| |||| ||||||||||||| | |||||||||  |||||||||||||| |||||||||||||||||    
T  9671315 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgttttacac 9671217  T
Q  116 acgaggctgtttcca 130  Q
    | |||||||||||||    
T  9671216 aagaggctgtttcca 9671202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 21779260 - 21779373
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacac 115  Q
    ||||||||||||||||| ||||||||  |||||||||||| ||||||||| ||||| |||||||||  |||||||||||||  |||||||||||||||||    
T  21779260 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaa-ggggtcccaccatttggtgtattgtacgcaaccttaccctgttttacac 21779358  T
Q  116 acgaggctgtttcca 130  Q
    | |||||||| ||||    
T  21779359 aagaggctgtctcca 21779373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 23397899 - 23397787
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacaca 116  Q
    |||||||||||||||| ||||||||  ||||||||| || ||||| ||||||| | |||||||||  ||||||||||| || |||||||| |||||||||    
T  23397899 aaagggcaacccggtgcactagagctcccgcatatgtagggtccgagaagggg-tcccaccatttggtgtattgtacgtagccttaccctattttacaca 23397801  T
Q  117 cgaggctgtttcca 130  Q
     |||||||||||||    
T  23397800 agaggctgtttcca 23397787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 36871629 - 36871514
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttt-a 112  Q
    ||||||||||||||||||| |||| |||  ||||||| |||| ||||||||||||| | |||||||||  |||||||||||||| ||||||||||||| |    
T  36871629 aaaaaagggcaacccggtgcactaaagctcccgcatacgcag-gtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgttttca 36871532  T
Q  113 cacacgaggctgtttcca 130  Q
    |||| |||||||||||||    
T  36871531 cacaagaggctgtttcca 36871514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 8455310 - 8455430
Alignment:
Q  11 tttaaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccc--tgt 108  Q
    |||| ||||||||||||||||| |||| |||  | ||||| |||| ||||||||| ||||| |||||||||  |||||||||||||| |||||||  |||    
T  8455310 tttataaaagggcaacccggtgcactaaagctccggcatacgcagggtccgggaa-ggggtcccaccatttggtgtattgtacgcagccttaccctgtgt 8455408  T
Q  109 tttacacacgaggctgtttcca 130  Q
    |||||||| |||||||||||||    
T  8455409 tttacacaagaggctgtttcca 8455430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 10546301 - 10546205
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    ||||||||||||||||||| |||| |||  ||||||| |||| ||||||||| ||||| |||||||||  |||||||||||||| |||||||||||||    
T  10546301 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa-ggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 10546205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 14444866 - 14444750
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-tttta 112  Q
    |||||||||||||| |||| |||| |||  ||||||| |||| ||||||||| ||||| |||||||||  ||||| |||| ||| ||||||||| |||||    
T  14444866 aaaaaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaa-ggggtcccaccatttggtgtatcgtacacagccttaccctgttttta 14444768  T
Q  113 cacacgaggctgtttcca 130  Q
    |||| |||||||||||||    
T  14444767 cacaagaggctgtttcca 14444750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 17623703 - 17623587
Alignment:
Q  13 taaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--ttt 110  Q
    |||||||||||||||| ||| |||| ||| ||| |||| ||||  | |||||||||| |||||||||||  |||||||||||||| |||||||||  |||    
T  17623703 taaaaaagggcaacccagtgcactaaagcttccacatacgcaggattcgggaagggg-ttccaccatttggtgtattgtacgcagccttaccctgatttt 17623605  T
Q  111 tacacacgaggctgtttc 128  Q
    |||||| |||| ||||||    
T  17623604 tacacaagaggttgtttc 17623587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 25249735 - 25249851
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttt-ta 112  Q
    ||||||||||||||||||| |||| |||   |||||| |||| || |||||||||  | |||||||||  |||||||||||||| |||||||||||| ||    
T  25249735 aaaaaagggcaacccggtgcactaaagctcacgcatacgcagggttcgggaaggga-tcccaccatttggtgtattgtacgcagccttaccctgtttgta 25249833  T
Q  113 cacacgaggctgtttcca 130  Q
    |||| ||| |||||||||    
T  25249834 cacaagagactgtttcca 25249851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 10543835 - 10543719
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccacca--tttaatgtattgtacgcagtcttaccctg--tttta 112  Q
    |||||||||||||||| |||| |||  ||||||| |||| ||||||||| ||||| ||||||  |||  |||||||||||||| |||||||||  |||||    
T  10543835 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa-ggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttta 10543737  T
Q  113 cacacgaggctgtttcca 130  Q
    |||| ||||| |||||||    
T  10543736 cacaagaggccgtttcca 10543719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 12023954 - 12024032
Alignment:
Q  52 gcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttacacacgaggctgtttcca 130  Q
    |||| |||||||| |||||| |||||||||  |||||||||||||| ||||||||| ||||||||| |||||||||||||    
T  12023954 gcagggtccggga-gggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttcca 12024032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 22371149 - 22371078
Alignment:
Q  57 gtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacacacgaggctgtttcca 130  Q
    ||||||||||||| | |||||||||  |||||||||||||| |||||||||||||  |||||||||||||||||    
T  22371149 gtccgggaagggg-tcccaccatttggtgtattgtacgcagccttaccctgtttt-tacacgaggctgtttcca 22371078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 133
Target Start/End: Complemental strand, 30826173 - 30826055
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccct-gtttta 112  Q
    |||||||| ||| | |||| |||| |||  ||||||||| || ||| ||||||||  |||||||||||  |||||||||||||  ||||||||  |||||    
T  30826173 aaaaaaggacaatctggtgcactaaagctcccgcatatgtagggtctgggaaggg--ttccaccatttggtgtattgtacgcaaccttaccctattttta 30826076  T
Q  113 cacacgaggctgtttccaaga 133  Q
    |||| ||||||||||||||||    
T  30826075 cacaagaggctgtttccaaga 30826055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 17668141 - 17668023
Alignment:
Q  13 taaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--ttt 110  Q
    |||||||||||||||||||| |||| |||  ||  ||| |||| || || ||||||| |||||||||||  |||||||||||||| |||||||||  |||    
T  17668141 taaaaaagggcaacccggtgcactaaagctcccatatacgcagggttcgagaagggg-ttccaccatttggtgtattgtacgcagccttaccctgatttt 17668043  T
Q  111 tacacacgaggctgtttcca 130  Q
    |||||| |||| | ||||||    
T  17668042 tacacaagaggttctttcca 17668023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 14530455 - 14530339
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctg--tttta 112  Q
    |||||||||||||||| |||| |||  ||||||| |||| ||||||||| ||||| |||||||  ||  ||||||||||| || |||||||||  |||||    
T  14530455 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa-ggggtcccaccattattggtgtattgtacgtagccttaccctgtttttta 14530357  T
Q  113 cacacgaggctgtttcca 130  Q
     ||| |||||||||||||    
T  14530356 tacaagaggctgtttcca 14530339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 11514571 - 11514457
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--ttttac 113  Q
    |||||||||| |||||| |||| |||  ||||||| |||| ||| ||||||||  | |||||||||  |||||||||||||| |||||  ||  ||||||    
T  11514571 aaaagggcaatccggtgcactaaagctcccgcatacgcagggtctgggaaggg--tcccaccatttggtgtattgtacgcagccttactttgttttttac 11514474  T
Q  114 acacgaggctgtttcca 130  Q
    ||| |||||||||||||    
T  11514473 acaagaggctgtttcca 11514457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 32781337 - 32781401
Alignment:
Q  67 ggggttccaccatttaatgtattgtacgcagtcttaccctg--ttttacacacgaggctgtttcc 129  Q
    ||||| |||||||||  ||||||||||||||||||||||||  ||||||||| |||| |||||||    
T  32781337 ggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttcc 32781401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 40762234 - 40762348
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccc--tgttttaca 114  Q
    |||||||||||||||| |||| |||  || |||| |||| |||| |||| ||| | |||||||||  ||||||||||| || |||||||  | |||||||    
T  40762234 aaagggcaacccggtgcactaaagctcccacatacgcagggtccaggaaaggg-tcccaccatttggtgtattgtacgtagccttacccagttttttaca 40762332  T
Q  115 cacgaggctgtttcca 130  Q
    || |||||||||||||    
T  40762333 caagaggctgtttcca 40762348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 5841166 - 5841070
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccat--ttaatgtattgtacgcagtcttaccctgtttt 111  Q
    ||||||||||| ||||| |||| |||  |||||||||| | ||||||||| ||||| |||||||  || ||||||||||||||  |||||||| ||||    
T  5841166 aaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaa-ggggtcccaccattattgatgtattgtacgcatccttaccctatttt 5841070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 27573704 - 27573646
Alignment:
Q  69 ggttccaccatttaatgtattgtacgcagtcttaccctgttt-tacacacgaggctgtt 126  Q
    |||||||||||||  |||||||||||||| |||||| ||||| |||||| |||||||||    
T  27573704 ggttccaccatttggtgtattgtacgcagccttaccatgtttatacacaagaggctgtt 27573646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 39189501 - 39189555
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaaggg 68  Q
    |||||| |||||||||||| ||||||||  |||||||||| | ||||||||||||    
T  39189501 aaaaaaaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggg 39189555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 99314 - 99375
Alignment:
Q  67 ggggttccaccatttaatgtattgtacgcagtcttaccctgttttacacacgaggctgtttc 128  Q
    |||||||||||||||  |||||||||||||| ||| || ||||||  ||| |||||||||||    
T  99314 ggggttccaccatttggtgtattgtacgcagccttgccatgttttttacaagaggctgtttc 99375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 24200691 - 24200739
Alignment:
Q  84 tgtattgtacgcagtcttaccctg--ttttacacacgaggctgtttcca 130  Q
    |||||||||||||| |||||||||  ||||||||| |||||||||||||    
T  24200691 tgtattgtacgcagccttaccctgttttttacacaagaggctgtttcca 24200739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 34080237 - 34080184
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggg 69  Q
    ||||||||||||||||| |||| | |  |||||||||||| |||||||||||||    
T  34080237 aaaagggcaacccggtgcactaaaactcccgcatatgcagggtccgggaagggg 34080184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 7214603 - 7214552
Alignment:
Q  84 tgtattgtacgcagtcttaccctg--ttttacacacgaggctgtttccaaga 133  Q
    |||||||||||||| |||||||||  ||||||||| ||| ||||||||||||    
T  7214603 tgtattgtacgcagccttaccctgtattttacacaagagactgtttccaaga 7214552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 10052 - 10162
Alignment:
Q  19 agggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacacacg 118  Q
    |||||||||||||| ||| ||||  | |||||||||| ||||||||||||| | |||| ||||  |||||||||||||||||||| |||||||||||| |    
T  10052 agggcaacccggtgcactggagctcctgcatatgcagggtccgggaagggg-tcccactatttggtgtattgtacgcagtcttactctgttttacacaag 10150  T
Q  119 aggctgtttcca 130  Q
    ||||||||||||    
T  10151 aggctgtttcca 10162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 20380 - 20490
Alignment:
Q  19 agggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacacacg 118  Q
    |||||||||||||| ||| ||||  | |||||||||| ||||||||||||| | |||| ||||  |||||||||||||||||||| |||||||||||| |    
T  20380 agggcaacccggtgcactggagctcctgcatatgcagggtccgggaagggg-tcccactatttggtgtattgtacgcagtcttactctgttttacacaag 20478  T
Q  119 aggctgtttcca 130  Q
    ||||||||||||    
T  20479 aggctgtttcca 20490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 43794 - 43680
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacac 115  Q
    ||||||||||| | ||| ||||||||  |||||||||||| ||||| ||| ||||| |||||||||  |||||||||||||| |||||| ||||||||||    
T  43794 aaaagggcaactcagtgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttacac 43695  T
Q  116 acgaggctgtttcca 130  Q
    | || ||||||||||    
T  43694 aagacgctgtttcca 43680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 130
Target Start/End: Complemental strand, 46969 - 46852
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccc--tgtttt 111  Q
    ||||||||||||||||||| |||| |||  ||||||| |||| ||||||||| ||||| |||||||||  |||||||||||||  |||||||  | ||||    
T  46969 aaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa-ggggtcccaccatttggtgtattgtacgcaaccttaccctatttttt 46871  T
Q  112 acacacgaggctgtttcca 130  Q
    ||||| |||| ||||||||    
T  46870 acacaagaggttgtttcca 46852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 24769 - 24882
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg--tttt 111  Q
    |||||||||||||| | || |||| |||  ||||||| |||| || |||||||||| | |||||||||  ||| |||||||||| |||||||||  ||||    
T  24769 aaaaaagggcaaccggctgcactaaagctcccgcatacgcagggttcgggaagggg-tcccaccatttggtgtgttgtacgcagccttaccctgtttttt 24867  T
Q  112 acacacgaggctgtt 126  Q
    ||||| |||||||||    
T  24868 acacaagaggctgtt 24882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 11264 - 11152
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacaca 116  Q
    ||||||||||| |||| ||||||||  |||||||||||| ||||||||| || || |||||||||  ||||||||| |||| |||||  |||||||||||    
T  11264 aaagggcaacctggtgcactagagctcccgcatatgcagggtccgggaa-ggtgtcccaccatttggtgtattgtaagcagccttactttgttttacaca 11166  T
Q  117 cgaggctgtttcca 130  Q
     |||||||||||||    
T  11165 agaggctgtttcca 11152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 105
Target Start/End: Original strand, 24130 - 24220
Alignment:
Q  14 aaaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccc 105  Q
    |||||||||||| |||||| ||||||||  |||||||||||| ||||||||| ||||| |||||||||  |||||||||||||| |||||||    
T  24130 aaaaaagggcaatccggtgcactagagctcccgcatatgcagggtccgggaa-ggggtcccaccatttggtgtattgtacgcagccttaccc 24220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 13022 - 13137
Alignment:
Q  15 aaaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctg-ttttac 113  Q
    |||||||||||||||||| |||| |||  ||||||| |||| ||| ||||| ||||| ||||||||   |||||||||||||| |||||| || ||||||    
T  13022 aaaaagggcaacccggtgcactaaagcccccgcatacgcagggtctgggaa-ggggtcccaccattcggtgtattgtacgcagccttaccttgtttttac 13120  T
Q  114 acacgaggctgtttcca 130  Q
     || |||||||||||||    
T  13121 gcaagaggctgtttcca 13137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 59114 - 58998
Alignment:
Q  17 aaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaa--tgtattgtacgcagtcttaccctg--tttta 112  Q
    ||||||||||||| || |||| |||  ||||||| |||||||| ||||||||| | |||||||||    ||||||||||||||||||||||||  |||||    
T  59114 aaagggcaacccgatgcactaaagctcccgcatacgcagagtctgggaagggg-tcccaccatttttggtgtattgtacgcagtcttaccctgtttttta 59016  T
Q  113 cacacgaggctgtttcca 130  Q
     ||| |||||||||||||    
T  59015 tacaagaggctgtttcca 58998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 10946 - 10852
Alignment:
Q  16 aaaagggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgtttt 111  Q
    ||||| ||||||| ||| |||| |||  ||||||| |||| ||||||||| ||||| |||||||||  ||||||| |||||| | |||||||||||    
T  10946 aaaagagcaacccagtgcactaaagctcccgcatacgcagggtccgggaa-ggggtcccaccatttggtgtattggacgcagccctaccctgtttt 10852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 1591 - 1696
Alignment:
Q  21 ggcaacccggtgtactagagcatccgcatatgcagagtccgggaagggggttccaccatttaatgtattgtacgcagtcttaccctgttttacacacgag 120  Q
    ||||||| |||| |||| |||  ||||||| || | ||||||||||||| | ||| |||||  ||||||||| |||| |||| ||||||||||||| |||    
T  1591 ggcaacctggtgcactaaagctcccgcatacgccgggtccgggaagggg-tcccatcatttggtgtattgtatgcagccttatcctgttttacacaagag 1689  T
Q  121 gctgttt 127  Q
    | |||||    
T  1690 gttgttt 1696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University