View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10468_low_14 (Length: 379)
Name: NF10468_low_14
Description: NF10468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10468_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 330; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 12 - 377
Target Start/End: Original strand, 45500694 - 45501058
Alignment:
| Q |
12 |
aatccttggccgtcgtagtaaaacttgaccccatctctcctatttttatcaacgtctcctttccatgcctttgagcctccaccactagtcaagaactgca |
111 |
Q |
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| T |
45500694 |
aatccttgtccgtcatagtaaaacttgaccccatctctcctatttttatcaacgtctcctttccatgcctttgagcctccaccactagtcaagaactgca |
45500793 |
T |
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| Q |
112 |
tttggctgcaaagccactcaaatttcattaaggtgatattgatgattcagtaaactaacaatcaaacaagtccaatttaaatcaaggtaatatatagacc |
211 |
Q |
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| T |
45500794 |
tttggctgcaaagccact-aaatttcattaaggtgatattgatgattcagtaaactaacaatcaaacaagtccaatttaaatcaaggtaatatatagacc |
45500892 |
T |
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| Q |
212 |
tacctgtcggtgctacttatgtgttccaagcagtggtcgtgcccattcatgtacatatcaacattgttggcctgcaaatttcattttaaaatgagagatg |
311 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45500893 |
tacctgtcggtgctacttatgtgttccaagcagtggtcgtgcccattcatgtacatatcaacattgttggcctgcaaatttcattttaaaatgagagatg |
45500992 |
T |
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| Q |
312 |
tttatcggtaaataaaggacgatgcaccttagctttatagctaataggacagtatgagtactagtt |
377 |
Q |
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| T |
45500993 |
tttatcagtaaataaaggacgatgcaccttatctttataactagtaggacagtatgagtgctagtt |
45501058 |
T |
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