View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10468_low_18 (Length: 361)
Name: NF10468_low_18
Description: NF10468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10468_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 340; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 44431140 - 44431483
Alignment:
| Q |
1 |
gaatcctcgatgaaggaccgcacaatgcgacaacaatcaggcaccgtggatgaaaacggtgccaaataaggaaaagcaggtatgatatccgatgtttgaa |
100 |
Q |
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| T |
44431140 |
gaatcctcgatgaaggaccgcacaatgcgacaacaatcaggcaccgtggatgaaaacggtgccaaataaggaaaagcaggtatgatatccgatgtttgaa |
44431239 |
T |
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| Q |
101 |
tctgaaaagaaagcacattcattgaatattcatactctttcttcatcaacatctgctcaaacttatcaccacctatagcctcggctatctgcttcctaca |
200 |
Q |
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| T |
44431240 |
tctgaaaagaaagcacattcattgaatattcatactctttcttcatcaacatctgctcaaacttatcaccacctatagcctcggctatctgcttcctaca |
44431339 |
T |
|
| Q |
201 |
atctgacaacagcaattcatgatacttatccctatgcttgcttaaaacatcaagcaacgcatcaatcgggtaaccaaatctacgcagtgttactcctaat |
300 |
Q |
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| T |
44431340 |
atctgacaacagcaattcatgatacttatccctatgcttgcttaaaacatcaagcaacgcatcaatcgggtaaccaaatctacgcagtgttactcctaat |
44431439 |
T |
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| Q |
301 |
agactcacataatccttaatcaacaaaagatgattagcagtttg |
344 |
Q |
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| T |
44431440 |
agactcacataatccttaatcaacaaaagatgattggcagtttg |
44431483 |
T |
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