View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10468_low_29 (Length: 301)

Name: NF10468_low_29
Description: NF10468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10468_low_29
NF10468_low_29
[»] chr4 (1 HSPs)
chr4 (27-60)||(37571531-37571564)


Alignment Details
Target: chr4 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 37571564 - 37571531
Alignment:
27 tggtgggaatcagtttccaaagcccgttcccgaa 60  Q
    ||||||||||||||||||||||||||||||||||    
37571564 tggtgggaatcagtttccaaagcccgttcccgaa 37571531  T

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