View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10468_low_38 (Length: 251)
Name: NF10468_low_38
Description: NF10468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10468_low_38 |
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Alignment Details
Target: chr4 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 10157124 - 10157364
Alignment:
| Q |
1 |
tgttgtaaagtatctacacgttctcaattaaacttcctaaattaaagctacctttctatccacactagattgatgatccttctatgtgaaatcatttcat |
100 |
Q |
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| T |
10157124 |
tgttgtaaaatatctacacgttctcaattaaacttcctaaattaaagctacctttctatccacactacattgatgatccttctatgtgaaatcatttcat |
10157223 |
T |
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| Q |
101 |
caaacttaggtgatgctcataggaaaattttaagtttaggaaggcaatgactcaatattttctttaacatttggtgtaatattacatgatccattattat |
200 |
Q |
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| T |
10157224 |
caaactttggtgatgctcataggaaaattttaagtttaggaaggcaatgactcaatattttctttaacatttggtgtaatgttacatgatccattattat |
10157323 |
T |
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| Q |
201 |
tttgatgtactggacagtatttcctaagaaccctacctttg |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
10157324 |
tttgatgtactggacagtatttcctaagaaccctacctttg |
10157364 |
T |
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