View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10469_high_6 (Length: 221)

Name: NF10469_high_6
Description: NF10469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10469_high_6
NF10469_high_6
[»] chr7 (39 HSPs)
chr7 (2-135)||(48703904-48704037)
chr7 (1-135)||(21522313-21522447)
chr7 (3-118)||(44448025-44448140)
chr7 (1-135)||(8769439-8769573)
chr7 (1-135)||(22338368-22338502)
chr7 (2-126)||(23437256-23437380)
chr7 (1-111)||(43726361-43726471)
chr7 (1-126)||(34568687-34568812)
chr7 (1-126)||(47251054-47251179)
chr7 (1-126)||(11678807-11678932)
chr7 (1-117)||(32706845-32706961)
chr7 (1-135)||(9230771-9230906)
chr7 (1-135)||(10625240-10625375)
chr7 (1-117)||(35085896-35086013)
chr7 (11-135)||(9034482-9034606)
chr7 (7-126)||(28349544-28349663)
chr7 (13-126)||(15327031-15327144)
chr7 (1-126)||(47305284-47305409)
chr7 (1-81)||(18731176-18731256)
chr7 (13-117)||(37143876-37143980)
chr7 (8-135)||(36506976-36507100)
chr7 (1-77)||(38842175-38842251)
chr7 (5-135)||(24119865-24119996)
chr7 (1-79)||(5238608-5238686)
chr7 (32-126)||(23472697-23472791)
chr7 (67-135)||(31715728-31715796)
chr7 (1-64)||(47250714-47250777)
chr7 (5-135)||(39118105-39118234)
chr7 (69-136)||(26920142-26920209)
chr7 (12-126)||(473357-473462)
chr7 (69-126)||(10625187-10625244)
chr7 (69-126)||(21522443-21522500)
chr7 (69-126)||(43726467-43726524)
chr7 (69-135)||(9230902-9230968)
chr7 (93-134)||(24119810-24119851)
chr7 (1-50)||(26920097-26920146)
chr7 (89-126)||(34568829-34568866)
chr7 (69-117)||(5238564-5238612)
chr7 (46-126)||(44485534-44485614)
[»] chr8 (51 HSPs)
chr8 (2-136)||(8654030-8654164)
chr8 (2-135)||(26736220-26736353)
chr8 (1-135)||(23244610-23244744)
chr8 (1-135)||(14920568-14920702)
chr8 (1-118)||(16645657-16645774)
chr8 (5-126)||(24456813-24456934)
chr8 (1-117)||(40040275-40040391)
chr8 (1-136)||(31230770-31230905)
chr8 (2-126)||(37393635-37393759)
chr8 (1-136)||(30568370-30568505)
chr8 (1-126)||(40094579-40094704)
chr8 (1-125)||(29027077-29027201)
chr8 (2-126)||(30650294-30650418)
chr8 (1-117)||(44254978-44255094)
chr8 (1-126)||(3869051-3869178)
chr8 (7-126)||(11639156-11639274)
chr8 (1-112)||(33542541-33542652)
chr8 (1-135)||(758439-758573)
chr8 (1-126)||(119273-119398)
chr8 (1-136)||(35223868-35223996)
chr8 (1-109)||(7041750-7041858)
chr8 (1-78)||(9495175-9495252)
chr8 (1-126)||(36344118-36344243)
chr8 (1-77)||(40032571-40032647)
chr8 (12-135)||(18017885-18018008)
chr8 (1-80)||(18621897-18621976)
chr8 (1-81)||(19302342-19302422)
chr8 (1-61)||(21515369-21515429)
chr8 (5-117)||(26217182-26217294)
chr8 (5-117)||(32733824-32733936)
chr8 (1-118)||(39912074-39912193)
chr8 (5-126)||(5416973-5417095)
chr8 (2-126)||(39240188-39240301)
chr8 (1-77)||(28206910-28206987)
chr8 (1-55)||(6843661-6843715)
chr8 (1-65)||(1825966-1826030)
chr8 (1-65)||(1860411-1860475)
chr8 (1-77)||(35486015-35486091)
chr8 (69-135)||(119211-119277)
chr8 (89-135)||(14920506-14920552)
chr8 (1-43)||(18914417-18914459)
chr8 (69-126)||(9495248-9495305)
chr8 (1-78)||(12873200-12873277)
chr8 (1-77)||(30872944-30873020)
chr8 (89-136)||(35224012-35224059)
chr8 (69-135)||(23244740-23244806)
chr8 (88-126)||(40094719-40094757)
chr8 (69-118)||(758569-758618)
chr8 (70-135)||(6843592-6843657)
chr8 (89-134)||(28206998-28207043)
chr8 (90-126)||(26736371-26736407)
[»] chr6 (29 HSPs)
chr6 (1-135)||(24604969-24605103)
chr6 (1-126)||(33972363-33972488)
chr6 (2-126)||(29010058-29010182)
chr6 (1-137)||(11524923-11525059)
chr6 (1-126)||(6220213-6220338)
chr6 (1-126)||(31029628-31029753)
chr6 (1-126)||(33544979-33545104)
chr6 (13-117)||(3289043-3289147)
chr6 (2-118)||(13155951-13156067)
chr6 (2-118)||(13160807-13160923)
chr6 (3-111)||(33329325-33329433)
chr6 (3-111)||(35132760-35132868)
chr6 (5-112)||(2949452-2949559)
chr6 (1-117)||(17544610-17544726)
chr6 (2-118)||(3338589-3338705)
chr6 (5-126)||(14337063-14337184)
chr6 (1-112)||(1158708-1158820)
chr6 (8-113)||(35118939-35119044)
chr6 (8-79)||(2315732-2315803)
chr6 (2-81)||(31754362-31754441)
chr6 (61-126)||(1860703-1860768)
chr6 (1-126)||(24548398-24548523)
chr6 (8-120)||(33346631-33346743)
chr6 (25-135)||(25551442-25551552)
chr6 (1-78)||(29999570-29999647)
chr6 (69-135)||(33544917-33544983)
chr6 (89-126)||(12903325-12903362)
chr6 (89-126)||(13156084-13156121)
chr6 (89-126)||(13160940-13160977)
[»] chr2 (59 HSPs)
chr2 (1-135)||(44612640-44612774)
chr2 (1-136)||(32933748-32933883)
chr2 (1-135)||(31450761-31450895)
chr2 (1-126)||(28631378-28631503)
chr2 (1-126)||(33819553-33819678)
chr2 (1-117)||(13354334-13354450)
chr2 (1-117)||(41659858-41659974)
chr2 (2-135)||(12303880-12304013)
chr2 (1-126)||(25642425-25642550)
chr2 (1-126)||(28202964-28203089)
chr2 (1-117)||(4104316-4104432)
chr2 (3-135)||(34820374-34820506)
chr2 (2-117)||(27476525-27476640)
chr2 (1-135)||(43183678-43183812)
chr2 (1-135)||(39912785-39912917)
chr2 (13-126)||(40694344-40694457)
chr2 (2-118)||(34127678-34127793)
chr2 (11-135)||(41377449-41377573)
chr2 (1-118)||(4120920-4121037)
chr2 (1-126)||(39454555-39454671)
chr2 (1-126)||(44915896-44916021)
chr2 (1-135)||(21470390-21470524)
chr2 (1-111)||(27246102-27246212)
chr2 (1-126)||(16261027-16261152)
chr2 (1-126)||(16655710-16655835)
chr2 (1-126)||(27132615-27132739)
chr2 (2-135)||(16736259-16736389)
chr2 (1-112)||(27914012-27914122)
chr2 (5-126)||(20908615-20908736)
chr2 (4-77)||(16350240-16350313)
chr2 (2-78)||(32503704-32503780)
chr2 (2-73)||(5961827-5961898)
chr2 (1-64)||(10833200-10833263)
chr2 (1-126)||(14877585-14877706)
chr2 (5-126)||(18565170-18565279)
chr2 (1-126)||(27883625-27883739)
chr2 (1-137)||(17856292-17856417)
chr2 (40-126)||(37744584-37744670)
chr2 (3-55)||(5921561-5921613)
chr2 (1-77)||(36211507-36211583)
chr2 (11-126)||(37412697-37412812)
chr2 (5-126)||(36442237-36442359)
chr2 (2-43)||(12304341-12304382)
chr2 (1-56)||(11943666-11943721)
chr2 (69-135)||(38275680-38275746)
chr2 (69-126)||(27883572-27883629)
chr2 (1-38)||(39150001-39150038)
chr2 (19-135)||(35408705-35408812)
chr2 (69-136)||(39149938-39150005)
chr2 (69-135)||(37412804-37412869)
chr2 (69-126)||(44915843-44915900)
chr2 (69-117)||(15137029-15137077)
chr2 (69-136)||(32933685-32933752)
chr2 (90-136)||(5921632-5921678)
chr2 (69-126)||(13354281-13354338)
chr2 (69-135)||(28203085-28203151)
chr2 (69-118)||(39454667-39454716)
chr2 (71-136)||(41377581-41377646)
chr2 (69-126)||(43183808-43183865)
[»] chr4 (52 HSPs)
chr4 (1-126)||(54136248-54136373)
chr4 (1-135)||(34958988-34959122)
chr4 (1-126)||(1157363-1157488)
chr4 (1-126)||(24504097-24504222)
chr4 (1-135)||(25218241-25218375)
chr4 (1-135)||(29864333-29864466)
chr4 (1-126)||(22830954-22831079)
chr4 (1-126)||(27347701-27347826)
chr4 (1-126)||(45683274-45683399)
chr4 (1-135)||(52915047-52915181)
chr4 (1-126)||(21217951-21218076)
chr4 (2-115)||(29970307-29970420)
chr4 (1-126)||(33882106-33882231)
chr4 (1-126)||(46200642-46200767)
chr4 (5-135)||(40067509-40067639)
chr4 (13-118)||(9657779-9657884)
chr4 (1-126)||(43317036-43317161)
chr4 (1-117)||(25058946-25059062)
chr4 (1-135)||(4965966-4966097)
chr4 (2-125)||(10014622-10014745)
chr4 (2-125)||(10021763-10021886)
chr4 (1-114)||(1205493-1205606)
chr4 (1-126)||(44170136-44170261)
chr4 (1-126)||(46621031-46621156)
chr4 (1-113)||(44710560-44710672)
chr4 (8-126)||(21051463-21051580)
chr4 (1-135)||(33625959-33626093)
chr4 (1-135)||(45911736-45911865)
chr4 (1-126)||(9010662-9010787)
chr4 (2-126)||(4793757-4793881)
chr4 (7-126)||(46535626-46535745)
chr4 (5-126)||(38866502-38866624)
chr4 (1-117)||(43969639-43969756)
chr4 (1-110)||(53645608-53645716)
chr4 (1-81)||(54191742-54191822)
chr4 (1-64)||(12381220-12381283)
chr4 (6-125)||(15985628-15985743)
chr4 (1-56)||(44432798-44432853)
chr4 (8-69)||(42779673-42779734)
chr4 (20-126)||(21885000-21885106)
chr4 (1-135)||(28570587-28570712)
chr4 (58-136)||(44428665-44428743)
chr4 (57-126)||(25593304-25593373)
chr4 (69-139)||(8246858-8246928)
chr4 (69-126)||(4966093-4966150)
chr4 (69-126)||(45911683-45911740)
chr4 (69-125)||(34958936-34958992)
chr4 (69-136)||(43316973-43317040)
chr4 (40-118)||(8246942-8247020)
chr4 (69-135)||(46621152-46621218)
chr4 (89-126)||(9657892-9657929)
chr4 (89-126)||(53645555-53645592)
[»] chr3 (73 HSPs)
chr3 (2-126)||(52268262-52268386)
chr3 (1-136)||(8846233-8846368)
chr3 (1-126)||(45171225-45171349)
chr3 (2-117)||(31514021-31514136)
chr3 (1-135)||(40639274-40639408)
chr3 (1-126)||(41997923-41998048)
chr3 (1-135)||(4846752-4846887)
chr3 (1-135)||(40926168-40926302)
chr3 (1-126)||(2829565-2829690)
chr3 (1-126)||(9028295-9028420)
chr3 (1-126)||(27254088-27254213)
chr3 (1-126)||(35753536-35753660)
chr3 (1-118)||(53678545-53678662)
chr3 (7-126)||(51311694-51311813)
chr3 (1-117)||(22444299-22444415)
chr3 (1-117)||(51885521-51885637)
chr3 (1-112)||(47891631-47891742)
chr3 (1-118)||(14353158-14353277)
chr3 (1-139)||(40969412-40969549)
chr3 (1-139)||(43527142-43527280)
chr3 (1-82)||(7937711-7937792)
chr3 (1-136)||(15862276-15862404)
chr3 (1-126)||(28688094-28688219)
chr3 (5-126)||(44069227-44069348)
chr3 (10-117)||(53841140-53841247)
chr3 (8-126)||(5348732-5348850)
chr3 (1-135)||(26332414-26332547)
chr3 (2-118)||(7274755-7274871)
chr3 (27-135)||(7950370-7950478)
chr3 (34-126)||(34630086-34630178)
chr3 (1-109)||(49222148-49222256)
chr3 (2-112)||(28691232-28691342)
chr3 (1-135)||(41208558-41208691)
chr3 (1-135)||(54081378-54081512)
chr3 (1-77)||(34521423-34521499)
chr3 (1-81)||(54247419-54247499)
chr3 (8-135)||(19124345-19124463)
chr3 (4-126)||(17273881-17274002)
chr3 (2-112)||(50819375-50819485)
chr3 (2-112)||(50856379-50856489)
chr3 (3-135)||(21169825-21169956)
chr3 (1-126)||(12123247-12123361)
chr3 (1-126)||(17102541-17102659)
chr3 (3-126)||(52606232-52606345)
chr3 (66-136)||(40410806-40410876)
chr3 (1-126)||(54107773-54107888)
chr3 (1-117)||(10756831-10756936)
chr3 (1-77)||(29248474-29248550)
chr3 (1-126)||(46766727-46766841)
chr3 (1-54)||(2078648-2078701)
chr3 (49-126)||(37133381-37133458)
chr3 (1-77)||(7742919-7742994)
chr3 (2-78)||(21918655-21918731)
chr3 (72-135)||(50819315-50819378)
chr3 (72-135)||(50856486-50856549)
chr3 (6-118)||(45871809-45871914)
chr3 (60-126)||(53841242-53841308)
chr3 (1-54)||(588326-588379)
chr3 (69-126)||(41208505-41208562)
chr3 (69-126)||(45171172-45171229)
chr3 (69-136)||(8846170-8846237)
chr3 (69-136)||(15862400-15862467)
chr3 (69-139)||(40969346-40969416)
chr3 (69-126)||(7937788-7937845)
chr3 (69-126)||(9028416-9028473)
chr3 (69-126)||(12123194-12123251)
chr3 (69-126)||(40926115-40926172)
chr3 (69-126)||(47891738-47891795)
chr3 (93-126)||(54108369-54108402)
chr3 (69-125)||(14353273-14353329)
chr3 (7-43)||(33772977-33773013)
chr3 (89-133)||(40639214-40639258)
chr3 (46-114)||(53309931-53309998)
[»] chr5 (43 HSPs)
chr5 (1-136)||(35263651-35263786)
chr5 (1-126)||(10656198-10656323)
chr5 (1-126)||(25923275-25923401)
chr5 (2-135)||(29024029-29024162)
chr5 (1-126)||(40774441-40774566)
chr5 (2-126)||(28391927-28392051)
chr5 (1-136)||(42710507-42710642)
chr5 (1-135)||(12593613-12593747)
chr5 (5-126)||(5087911-5088032)
chr5 (1-126)||(19205100-19205225)
chr5 (1-126)||(39706155-39706280)
chr5 (1-126)||(41859781-41859906)
chr5 (1-111)||(43569927-43570038)
chr5 (1-126)||(12694843-12694968)
chr5 (5-126)||(17861199-17861320)
chr5 (1-126)||(31656462-31656587)
chr5 (1-126)||(36752006-36752131)
chr5 (1-97)||(334453-334549)
chr5 (1-126)||(7399181-7399307)
chr5 (8-118)||(16353266-16353376)
chr5 (1-136)||(5152773-5152907)
chr5 (19-126)||(41372333-41372440)
chr5 (5-135)||(9693079-9693209)
chr5 (1-126)||(3878638-3878763)
chr5 (1-117)||(40589211-40589327)
chr5 (1-117)||(40589814-40589930)
chr5 (2-112)||(15267397-15267508)
chr5 (2-77)||(38416287-38416362)
chr5 (1-117)||(26289133-26289249)
chr5 (1-126)||(31909087-31909212)
chr5 (3-135)||(5624538-5624669)
chr5 (1-135)||(7210613-7210736)
chr5 (1-82)||(8418336-8418415)
chr5 (1-112)||(14143662-14143773)
chr5 (1-118)||(33763062-33763182)
chr5 (2-81)||(15476404-15476487)
chr5 (1-117)||(21750901-21751014)
chr5 (69-135)||(31656583-31656649)
chr5 (69-126)||(19205047-19205104)
chr5 (69-135)||(33763000-33763066)
chr5 (69-118)||(3878593-3878642)
chr5 (71-116)||(17861152-17861197)
chr5 (69-126)||(31909034-31909091)
[»] chr1 (72 HSPs)
chr1 (1-136)||(30611377-30611512)
chr1 (8-134)||(13944675-13944801)
chr1 (1-126)||(6181720-6181845)
chr1 (1-126)||(34028878-34029003)
chr1 (1-126)||(50921217-50921342)
chr1 (1-125)||(18793849-18793973)
chr1 (1-136)||(9119449-9119584)
chr1 (1-135)||(22584446-22584580)
chr1 (1-135)||(30792535-30792669)
chr1 (1-126)||(51810241-51810367)
chr1 (1-126)||(51691978-51692103)
chr1 (1-135)||(25088111-25088245)
chr1 (8-126)||(27209273-27209391)
chr1 (2-123)||(11394818-11394939)
chr1 (1-126)||(34279344-34279469)
chr1 (13-126)||(46949905-46950018)
chr1 (1-135)||(4045194-4045328)
chr1 (1-135)||(50574609-50574743)
chr1 (1-126)||(11797279-11797403)
chr1 (2-135)||(30293171-30293304)
chr1 (1-126)||(36657658-36657783)
chr1 (1-117)||(40534082-40534198)
chr1 (5-118)||(21036146-21036256)
chr1 (1-112)||(24655743-24655854)
chr1 (14-117)||(33753386-33753489)
chr1 (2-113)||(40702982-40703093)
chr1 (8-135)||(46738888-46739015)
chr1 (1-127)||(45305513-45305639)
chr1 (11-123)||(1831831-1831943)
chr1 (1-126)||(10923466-10923592)
chr1 (5-126)||(10654133-10654254)
chr1 (1-135)||(37199027-37199150)
chr1 (5-100)||(12987684-12987779)
chr1 (4-107)||(19986245-19986348)
chr1 (1-112)||(24590344-24590454)
chr1 (2-108)||(4550722-4550828)
chr1 (13-135)||(42607671-42607793)
chr1 (1-78)||(29256975-29257052)
chr1 (8-136)||(52412692-52412820)
chr1 (2-77)||(2125362-2125437)
chr1 (1-126)||(5463221-5463347)
chr1 (1-117)||(11787897-11788014)
chr1 (1-77)||(32564103-32564179)
chr1 (1-135)||(14775840-14775964)
chr1 (2-126)||(34621791-34621917)
chr1 (1-126)||(21385093-21385218)
chr1 (1-54)||(48702048-48702101)
chr1 (1-61)||(36884872-36884932)
chr1 (1-79)||(20260530-20260608)
chr1 (60-118)||(49291105-49291163)
chr1 (66-126)||(16267912-16267972)
chr1 (13-81)||(28112899-28112967)
chr1 (10-118)||(31126041-31126149)
chr1 (52-126)||(5118155-5118229)
chr1 (1-55)||(13831197-13831251)
chr1 (69-135)||(25088241-25088307)
chr1 (69-126)||(29257048-29257105)
chr1 (69-126)||(37199146-37199203)
chr1 (71-135)||(10654256-10654320)
chr1 (69-117)||(36657614-36657662)
chr1 (69-136)||(34028815-34028882)
chr1 (89-135)||(3569472-3569518)
chr1 (69-135)||(14775960-14776026)
chr1 (89-135)||(24590470-24590516)
chr1 (69-126)||(30792665-30792722)
chr1 (1-43)||(35986389-35986431)
chr1 (89-135)||(42607617-42607663)
chr1 (69-135)||(45305635-45305701)
chr1 (69-126)||(11787844-11787901)
chr1 (89-126)||(30293117-30293154)
chr1 (89-126)||(32517758-32517795)
chr1 (1-33)||(16267872-16267904)
[»] scaffold0188 (1 HSPs)
scaffold0188 (1-136)||(13698-13833)
[»] scaffold0236 (1 HSPs)
scaffold0236 (2-135)||(11308-11442)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-126)||(40456-40581)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-118)||(93347-93463)
scaffold0022 (69-126)||(93294-93351)
[»] scaffold1436 (1 HSPs)
scaffold1436 (2-125)||(1580-1703)
[»] scaffold0809 (2 HSPs)
scaffold0809 (13-126)||(4487-4600)
scaffold0809 (89-126)||(4442-4479)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-126)||(91665-91790)
scaffold0016 (1-126)||(90909-91036)
[»] scaffold0045 (2 HSPs)
scaffold0045 (1-111)||(65896-66006)
scaffold0045 (1-111)||(73228-73338)
[»] scaffold0128 (2 HSPs)
scaffold0128 (1-78)||(44988-45065)
scaffold0128 (69-136)||(45061-45128)
[»] scaffold0444 (1 HSPs)
scaffold0444 (58-136)||(11762-11840)
[»] scaffold0168 (2 HSPs)
scaffold0168 (89-126)||(11732-11769)
scaffold0168 (2-126)||(11592-11715)
[»] scaffold0193 (1 HSPs)
scaffold0193 (66-126)||(26040-26100)
[»] scaffold0012 (1 HSPs)
scaffold0012 (69-117)||(177290-177338)


Alignment Details
Target: chr7 (Bit Score: 122; Significance: 9e-63; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 48704037 - 48703904
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  48704037 ttctcctctttttcatcttcatatcatctccatcaaccttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccctaacgtttttgaa 48703938  T
Q  102 ttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||||||||||||||||||||||||||||||||    
T  48703937 ttaaaactaacggaaataaccaaaagttgtaaca 48703904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 21522447 - 21522313
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||| ||||||||||||||||||||||||||||| |||| |||||| ||||||||||||| |||||||||||||||| ||| | ||||||||||||    
T  21522447 cttctcctttttttcatcttcatatcatctccatcaaccttcaacaacaagaatctcagaaaaactccagaagaaaatgaagaaaacctaacgtttttga 21522348  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     |||||| |||| ||||  |||||||  |||||||    
T  21522347 attaaaattaacagaaaagaccaaaatatgtaaca 21522313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 44448140 - 44448025
Alignment:
Q  3 tctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagt 102  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||| |||| ||||||||||| |||   |||||||||||| |    
T  44448140 tctcctctttttcatcttcatatcatctccatcaaccttcaacaacaaaaatcccagaaaaattccaaaagaaaatgaagaaagtctaacgtttttgaat 44448041  T
Q  103 taaaactaacggaaat 118  Q
    |||||||||| |||||    
T  44448040 taaaactaacagaaat 44448025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 8769439 - 8769573
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||| |||| |||||||| ||| |||||||||||| |||   ||||||||||||    
T  8769439 cttctcctctttttcatcttcatatcatctccatcacccttcaacaacaagaatcccagaaaaattcctgaagaaaatgaagaaaatataacgtttttga 8769538  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||||||||  |||||||  |||||||    
T  8769539 attaaaactaacggaaaggaccaaaatgtgtaaca 8769573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 22338502 - 22338368
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||| ||||||||| |||||| ||||||||| |||| |||||||||||  ||||||| |||| ||||||||||| ||||  ||||||||||||    
T  22338502 cttctcctcttcttcatcttcgtatcatttccatcaaccttcaacaacaaaaatcctagaaaaattccaaaagaaaatgaagaaactctaacgtttttga 22338403  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||||||||| |||||||  |||||||    
T  22338402 attaaaactaacggaaatgaccaaaatgtgtaaca 22338368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 23437380 - 23437256
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||| || |||| || ||||| |||||||||||||||| ||| | ||||||||||||     
T  23437380 ttctcctctttttcatcttcatatcatctccatcaaccttcaacaataagaatcccaaaaaaattccagaagaaaatgaagaaaacctaacgtttttgaa 23437281  T
Q  102 ttaaaactaacggaaataaccaaaa 126  Q
    |||||||||| |||||  |||||||    
T  23437280 ttaaaactaatggaaaggaccaaaa 23437256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 43726471 - 43726361
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||| || ||||| | |||||||||||||| ||| |||||| |||||||    
T  43726471 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcacaaaaaaatttcagaagaaaatgaagaaaacttaacatttttga 43726372  T
Q  101 gttaaaactaa 111  Q
     ||||||||||    
T  43726371 attaaaactaa 43726361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 34568812 - 34568687
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||||||||| |||||||||||||||||||| |||| |||||| |||| ||| |||| |||||||||||||||| ||| | |||| |||||||    
T  34568812 cttctcctctttttcattttcatatcatctccatcaaccttcaacaacaagaatcccaggaaaattccagaagaaaatgaagaaaacctaacatttttga 34568713  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||||| |||  |||||||    
T  34568712 attaaaactaacgaaaaggaccaaaa 34568687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 47251054 - 47251179
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||| || ||||| |||| || || | ||| ||| | ||||||||||||    
T  47251054 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccaaaaaaattccaaaaaaagaagaagaaaacataacgtttttga 47251153  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||| |||||||    
T  47251154 attaaaactaacggaaatgaccaaaa 47251179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 11678932 - 11678807
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||| ||||||||||||||||||||||||  ||||  |||| |||||||||||  ||||||| |||||||||||||||| ||| | ||||||||||||    
T  11678932 cttctcatctttttcatcttcatatcatctctgtcaagcttcaacaacaaaaatcctagaaaaattccagaagaaaatgaagaaaacctaacgtttttga 11678833  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||| ||||  |||||||    
T  11678832 attaaaactaacagaaaggaccaaaa 11678807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 32706961 - 32706845
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||| ||||||||| |||| |||||| |||  |||||||| |||| ||| ||||||| ||| | ||||||||||||    
T  32706961 cttctcctctttttcatcttcatatcatgtccatcaaccttcaacaacaagaattccagaaaaattccaaaagcaaatgaagaaaacctaacgtttttga 32706862  T
Q  101 gttaaaactaacggaaa 117  Q
     ||| ||||||||||||    
T  32706861 attagaactaacggaaa 32706845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 9230906 - 9230771
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcaga-aaaaatccagaagaaaatgaataaaccttaacgtttttg 99  Q
    ||||||||||| |||||||||||||||||||||||||| |||| |||||| ||||  | | |||||| |||||||||||||| ||| | |||||||||||    
T  9230906 cttctcctcttattcatcttcatatcatctccatcaaccttcaacaacaagaatcaaaaacaaaaattcagaagaaaatgaagaaaacctaacgtttttg 9230807  T
Q  100 agttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    | |||||| |||||||||| | |||||  |||||||    
T  9230806 aattaaaattaacggaaatgatcaaaatgtgtaaca 9230771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 10625240 - 10625375
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccag-aagaaaatgaataaaccttaacgtttttg 99  Q
    ||||||| ||||||||| |||||||||||||||||||| |||| |||||| |||| |||||||| ||||| || |||||||| ||| | |||||||||||    
T  10625240 cttctccactttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccagaaaaaaaatgaagaaaacgtaacgtttttg 10625339  T
Q  100 agttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    | ||||||||||| ||||  |||||||  |||||||    
T  10625340 aattaaaactaacagaaaggaccaaaatgtgtaaca 10625375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 35085896 - 35086013
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatca-actttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttg 99  Q
    |||||||||||||||||||||||||||||| |||   || |||| |||||| |||| || ||||| || ||||||||||||| ||| |||||||||||||    
T  35085896 cttctcctctttttcatcttcatatcatcttcatatcaccttcaacaacaagaatcccaaaaaaattctagaagaaaatgaagaaaacttaacgtttttg 35085995  T
Q  100 agttaaaactaacggaaa 117  Q
    | ||||||||||||||||    
T  35085996 aattaaaactaacggaaa 35086013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 9034482 - 9034606
Alignment:
Q  11 ttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaacta 110  Q
    |||||||||||||||||||||||||||  |||| |||||| |||| |||||||| |||| ||||||||||| |||   |||||||||||| |||||||||    
T  9034482 ttttcatcttcatatcatctccatcaatcttcaacaacaataatcccagaaaaattccaaaagaaaatgaagaaaatctaacgtttttgatttaaaacta 9034581  T
Q  111 acggaaataaccaaaagttgtaaca 135  Q
    ||| |||  |||||||  |||||||    
T  9034582 acgaaaaggaccaaaatctgtaaca 9034606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 28349544 - 28349663
Alignment:
Q  7 ctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaa 106  Q
    ||||||||||||||||||||||||| |||||| |||| |||||||||||  ||||||| | || ||||||||||| |||   |||||||||||| |||||    
T  28349544 ctctttttcatcttcatatcatctctatcaaccttcaacaacaaaaatccgagaaaaatttcaaaagaaaatgaagaaaatctaacgtttttgaattaaa 28349643  T
Q  107 actaacggaaataaccaaaa 126  Q
    ||||||| |||  |||||||    
T  28349644 actaacgaaaaggaccaaaa 28349663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 15327031 - 15327144
Alignment:
Q  13 ttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaac 112  Q
    ||||||||| |||||||||||||||| |||| |||||||||||| ||||||| ||||||||||| |||| ||| | ||||||||| || ||||||   ||    
T  15327031 ttcatcttcgtatcatctccatcaaccttcaacaacaaaaatctgagaaaaattccagaagaaattgaagaaaacctaacgttttagaattaaaatacac 15327130  T
Q  113 ggaaataaccaaaa 126  Q
    |||||| |||||||    
T  15327131 ggaaatgaccaaaa 15327144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 47305284 - 47305409
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||| ||||| ||||||||||||| |||| ||||||| || | |||||||||||  ||||||| |||| ||||||||||| ||| | |||| |||||||    
T  47305284 cttctactcttcttcatcttcatattatcttcatcaacctttaacaacaaaaatccgagaaaaattccaaaagaaaatgaagaaaacctaacatttttga 47305383  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||| |||||| |||||||    
T  47305384 attaaaactaatggaaatgaccaaaa 47305409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 18731176 - 18731256
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaa 81  Q
    |||||||||||||| ||| ||||||||||||||||||| |||| |||||| |||| |||||||| || |||||||||||||    
T  18731176 cttctcctctttttaatcatcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattctagaagaaaatgaa 18731256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 37143980 - 37143876
Alignment:
Q  13 ttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaac 112  Q
    |||||||||||||||||||||||||| |||| |||||||||||  ||||||| || |||| |||||||| |||   | | |||||||| |||||||||||    
T  37143980 ttcatcttcatatcatctccatcaaccttcaacaacaaaaatccgagaaaaattctagaaaaaaatgaagaaaatctgatgtttttgaattaaaactaac 37143881  T
Q  113 ggaaa 117  Q
    |||||    
T  37143880 ggaaa 37143876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 36506976 - 36507100
Alignment:
Q  8 tctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaa 107  Q
    |||| |||||||||||||||||||||||||| |||| |||||||| ||  ||||||| | |   |||||||||| ||| | ||| |||||||| ||||||    
T  36506976 tcttcttcatcttcatatcatctccatcaacattcaacaacaaaattccgagaaaaatttc---agaaaatgaagaaaacctaatgtttttgaattaaaa 36507072  T
Q  108 ctaacggaaataaccaaaagttgtaaca 135  Q
    ||||| ||||| |||||||  |||||||    
T  36507073 ctaacagaaatgaccaaaatgtgtaaca 36507100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 38842251 - 38842175
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaa 77  Q
    ||||||||||||||||||||||||| |||||||||||  |||| |||||| ||||||| ||||| || |||||||||    
T  38842251 cttctcctctttttcatcttcatataatctccatcaatcttcaacaacaagaatctcataaaaattctagaagaaaa 38842175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 24119865 - 24119996
Alignment:
Q  5 tcctctttttcatcttcatatcatctccatcaac-tttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagtt 103  Q
    ||||||| |||||||| ||||||||||||||||| ||||| | |||| | || |||||||| |||||||||||||||| |||   |||| ||||| | ||    
T  24119865 tcctcttcttcatctttatatcatctccatcaacctttcaactacaagagtcccagaaaaattccagaagaaaatgaagaaaatctaacattttttaatt 24119964  T
Q  104 aaaactaacggaaataaccaaaagttgtaaca 135  Q
    |||| |||| |||| ||||||||  |||||||    
T  24119965 aaaattaacagaaagaaccaaaatatgtaaca 24119996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5238608 - 5238686
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatg 79  Q
    |||||||||||||||||||| |||||||||||||||   || | ||||||||||| |||||||| ||| ||||||||||    
T  5238608 cttctcctctttttcatcttaatatcatctccatcactcttgaacaacaaaaatcccagaaaaattcctgaagaaaatg 5238686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 23472791 - 23472697
Alignment:
Q  32 catcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| |||| ||| || |||| |||||||| |||||||||||||||| |||   |||||||||||| |||||||||| |||||| |||||||    
T  23472791 catcaaccttcaacaataagaatcccagaaaaattccagaagaaaatgaagaaaatctaacgtttttgaattaaaactaatggaaatgaccaaaa 23472697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 31715796 - 31715728
Alignment:
Q  67 ccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||||||||||||| ||| | |||||||||||| ||||||||||||||||| |||||||  |||||||    
T  31715796 ccagaagaaaatgaagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatctgtaaca 31715728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 47250714 - 47250777
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaa 64  Q
    |||||||||||||||||||| ||||||||||||||||| |||| |||||| |||| || |||||    
T  47250714 cttctcctctttttcatctttatatcatctccatcaacattcaacaacaagaatcccaaaaaaa 47250777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 39118234 - 39118105
Alignment:
Q  5 tcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagtta 104  Q
    |||| ||||||||||||||||||| ||||||||| || | ||| || |||| | |||||| || | ||||||||||| |||   |||||||||||| |||    
T  39118234 tcctatttttcatcttcatatcatttccatcaacctttaacaataagaatc-ccgaaaaattctaaaagaaaatgaagaaaatctaacgtttttgaatta 39118136  T
Q  105 aaactaacggaaataaccaaaagttgtaaca 135  Q
    ||| |||| ||||| |||||||  |||||||    
T  39118135 aaattaacagaaatgaccaaaatgtgtaaca 39118105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 26920142 - 26920209
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
    ||||||| ||||| ||| |||||||||||||| |||||||||| |||||| |||||||  ||||||||    
T  26920142 agaagaagatgaagaaaacttaacgtttttgaattaaaactaatggaaatgaccaaaatgtgtaacaa 26920209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 473357 - 473462
Alignment:
Q  12 tttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaa 111  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||  |||| || || |||||||||         | |||||||||||| ||||||||||    
T  473357 tttcatcttcatatcatttccatcaactttcaacaacaataatcctagaagaattcgagaagaaaa---------cctaacgtttttgaattaaaactaa 473447  T
Q  112 cggaaataaccaaaa 126  Q
    ||||||  |||||||    
T  473448 cggaaaggaccaaaa 473462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 10625244 - 10625187
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| ||||| ||| | |||||||||||| ||||||||||||||||| |||||||    
T  10625244 agaagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaa 10625187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 21522443 - 21522500
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| ||||| ||| | |||||||||||| ||||||||||||||||| |||||||    
T  21522443 agaagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaa 21522500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 43726467 - 43726524
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| ||||| ||||  |||||||||||| ||||||||||||||||| |||||||    
T  43726467 agaagaagatgaagaaactctaacgtttttgaattaaaactaacggaaatgaccaaaa 43726524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 9230902 - 9230968
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||||| ||||| ||| | |||||||||||| ||||||||||||||||  |||||||  |||||||    
T  9230902 agaagaagatgaagaaaacataacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaaca 9230968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 24119851 - 24119810
Alignment:
Q  93 gtttttgagttaaaactaacggaaataaccaaaagttgtaac 134  Q
    |||||||| ||||||||||||||||| ||||||| |||||||    
T  24119851 gtttttgaattaaaactaacggaaatgaccaaaatttgtaac 24119810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26920146 - 26920097
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaa 50  Q
    |||||||||||||| || |||||||||||||||||| | |||| ||||||    
T  26920146 cttctcctcttttttattttcatatcatctccatcacccttcaacaacaa 26920097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 34568829 - 34568866
Alignment:
Q  89 taacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  34568829 taacgtttttgaattaaaactaacggaaatgaccaaaa 34568866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 5238612 - 5238564
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaa 117  Q
    ||||||| ||||| ||| ||||||||||||||  |||||||||||||||    
T  5238612 agaagaagatgaagaaaacttaacgtttttgaagtaaaactaacggaaa 5238564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 44485534 - 44485614
Alignment:
Q  46 aacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||| |||| |||||||| |||||||||||||||  ||| | ||| ||||| || || |||||||||||||  |||||||    
T  44485534 aacaagaatcccagaaaaattccagaagaaaatgatgaaaacctaatgttttggaatttaaactaacggaaaggaccaaaa 44485614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 7e-42; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 8654164 - 8654030
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||| ||||  ||||||| |||||||||||||||| ||| | ||||||||||||     
T  8654164 ttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcctagaaaaattccagaagaaaatgaagaaaacctaacgtttttgaa 8654065  T
Q  102 ttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
    |||||||||||||||||||||||||  ||||||||    
T  8654064 ttaaaactaacggaaataaccaaaatatgtaacaa 8654030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 26736353 - 26736220
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| |||||||||||||||| ||| | ||||||||||||     
T  26736353 ttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccagaagaaaatgaagaaagcctaacgtttttgaa 26736254  T
Q  102 ttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||||||||||||||  |||||||  |||||||    
T  26736253 ttaaaactaacggaaaggaccaaaatgtgtaaca 26736220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 23244744 - 23244610
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| |||| ||||||||||| ||| | ||||||||||||    
T  23244744 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccataagaaaatgaagaaaacctaacgtttttga 23244645  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||||||||  |||||||  |||||||    
T  23244644 attaaaactaacggaaacgaccaaaatgtgtaaca 23244610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 14920568 - 14920702
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||| |||| || |||||||||||||||||||||| ||| | ||||||||| ||    
T  14920568 cttcttctctttttcatcttcatatcatctccatcaactttcaacaacaagaatcccaaaaaaaatccagaagaaaatgaagaaaacctaacgttttcga 14920667  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     |||||| |||| ||||| |||||||  |||||||    
T  14920668 attaaaagtaacagaaatgaccaaaatgtgtaaca 14920702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 16645774 - 16645657
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||| ||||||||||||||||||||||||||||| |||| |||||| |||| || ||||| |||||||||||||||| ||| | ||||||||||||    
T  16645774 cttctcctttttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccataaaaattccagaagaaaatgaagaaaacctaacgtttttga 16645675  T
Q  101 gttaaaactaacggaaat 118  Q
     |||||||||||||||||    
T  16645674 attaaaactaacggaaat 16645657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 24456813 - 24456934
Alignment:
Q  5 tcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagtta 104  Q
    ||||| |||||||||||||||||||| ||||||| |||| |||||| |||| |||||||| |||||||||||||||| ||| | |||||||||||| |||    
T  24456813 tcctcattttcatcttcatatcatcttcatcaaccttcaacaacaagaatcccagaaaaattccagaagaaaatgaagaaaacctaacgtttttgaatta 24456912  T
Q  105 aaactaacggaaataaccaaaa 126  Q
    |||||||||||||| |||||||    
T  24456913 aaactaacggaaatgaccaaaa 24456934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 40040391 - 40040275
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| || | |||||| |||| |||||||| | |||||||||||||| ||| | ||||||||||||    
T  40040391 cttctcctctttttcatcttcatatcatctccatcaaccttgaacaacaagaatcccagaaaaattacagaagaaaatgaagaaaacctaacgtttttga 40040292  T
Q  101 gttaaaactaacggaaa 117  Q
     ||||||||||||||||    
T  40040291 attaaaactaacggaaa 40040275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 31230770 - 31230905
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||||||||||||||||||||||| || ||| |||| |||||| |||| | |||||| |||||||||||||||| ||| | ||||||||||||    
T  31230770 cttctcctctttttcatcttcatatcatctctataaaccttcaacaacaagaatcccggaaaaattccagaagaaaatgaagaaaacctaacgtttttga 31230869  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
     ||||||||||||||||  |||||||  ||||||||    
T  31230870 attaaaactaacggaaaggaccaaaatgtgtaacaa 31230905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 37393635 - 37393759
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    |||||||||||||||| |||||||||||| ||||||| ||||  ||||| |||| |||||||| |||||||||||||||| ||| | ||||||||||||     
T  37393635 ttctcctctttttcattttcatatcatcttcatcaaccttcaataacaagaatcccagaaaaattccagaagaaaatgaagaaaacctaacgtttttgaa 37393734  T
Q  102 ttaaaactaacggaaataaccaaaa 126  Q
    |||||||| |||||||| |||||||    
T  37393735 ttaaaacttacggaaatgaccaaaa 37393759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 30568505 - 30568370
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||| ||||||||||||||||||||||||||||||| ||||  ||||| |||  |||||||| |||||||||||||||| |||   | ||||||||||    
T  30568505 cttctcatctttttcatcttcatatcatctccatcaaccttcaagaacaagaattccagaaaaattccagaagaaaatgaagaaaatatgacgtttttga 30568406  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
     ||||||| ||||||||| |||||||  ||||||||    
T  30568405 attaaaacaaacggaaatgaccaaaatgtgtaacaa 30568370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 40094704 - 40094579
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||| ||||   |||||  | |||||||||||||| |||   ||||||| ||||    
T  40094704 cttctcctctttttcatcttcatatcatctccatcaacttttaacaacaagaatcctcgaaaattttcagaagaaaatgaagaaaatctaacgttcttga 40094605  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||| |||||||    
T  40094604 attaaaactaacggaaatgaccaaaa 40094579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 29027201 - 29027077
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||  ||| || ||||| | | |||||||||||| ||| | ||||||||| ||    
T  29027201 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagcatcccataaaaatttctgaagaaaatgaagaaaacctaacgttttaga 29027102  T
Q  101 gttaaaactaacggaaataaccaaa 125  Q
     ||||||||||| ||||| ||||||    
T  29027101 attaaaactaacagaaatgaccaaa 29027077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 30650418 - 30650294
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||||||||||||||||||||||||||||||||||  |||| |||||| |||| || ||||| | |||||||||||||| ||| | ||| |||||| |     
T  30650418 ttctcctctttttcatcttcatatcatctccatcaatcttcaacaacaagaatcccataaaaacttcagaagaaaatgaagaaaacctaaggttttttaa 30650319  T
Q  102 ttaaaactaacggaaataaccaaaa 126  Q
    ||||||||||||||||  |||||||    
T  30650318 ttaaaactaacggaaaggaccaaaa 30650294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 44255094 - 44254978
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||| |||| |||||||||||||||||||||||||||| |||| |||||| |||| |||||||| | ||||||||||| || ||| | |||| |||||||    
T  44255094 cttcccctcgttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcagaagaaaataaagaaaacctaacatttttga 44254995  T
Q  101 gttaaaactaacggaaa 117  Q
     ||||||||||||||||    
T  44254994 attaaaactaacggaaa 44254978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 3869178 - 3869051
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaa-tccagaagaaaatg-aataaaccttaacgttttt 98  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||  || |||||| |||||||||||||| || ||| | ||| ||||||    
T  3869178 cttctcctctttttcatcttcatatcatctccatcaactttcaacaacaagaattgcaaaaaaaattccagaagaaaatgaaaaaaaacctaatgttttt 3869079  T
Q  99 gagttaaaactaacggaaataaccaaaa 126  Q
    || ||||||||||| ||||  |||||||    
T  3869078 gaattaaaactaacagaaaagaccaaaa 3869051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 11639274 - 11639156
Alignment:
Q  7 ctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaa 106  Q
    |||||||||||||||||||||||||||||||| |||| |||||| |||  |||||||| || ||||||||||||| ||| | ||||| |||||| |||||    
T  11639274 ctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatgccagaaaaactctagaagaaaatgaacaaaacctaacg-ttttgaattaaa 11639176  T
Q  107 actaacggaaataaccaaaa 126  Q
    ||| ||| |||| |||||||    
T  11639175 acttacgaaaatgaccaaaa 11639156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 33542541 - 33542652
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||| |||||||||||||||| |||||| || |||| ||||||||||   ||||||| |||||||||||||||| ||| | |||| |||||||    
T  33542541 cttctcctcttcttcatcttcatatcatatccatcgaccttcaacaacaaaaattcaagaaaaattccagaagaaaatgaagaaaacctaacatttttga 33542640  T
Q  101 gttaaaactaac 112  Q
     |||||||||||    
T  33542641 attaaaactaac 33542652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 758573 - 758439
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||| || || ||||||||||||||||||||||| |||| |||||| |||| || ||||| |||||||||||||||| ||  | ||||||||||||    
T  758573 cttctccttttatttatcttcatatcatctccatcaaccttcaacaacaagaatcccaaaaaaattccagaagaaaatgaagaacacctaacgtttttga 758474  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||  || |||||| |||||||  |||||||    
T  758473 attaaaatcaatggaaatgaccaaaatgtgtaaca 758439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 119273 - 119398
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||| || |||| |||||||| |   |||||| ||||| ||| | ||   |||||||    
T  119273 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaataagaatcccagaaaaatttatgaagaagatgaagaaaacctattatttttga 119372  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||| |||||||    
T  119373 attaaaactaacggaaatgaccaaaa 119398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 35223996 - 35223868
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||       |||||| |||| || ||||| || ||||||||||||| |||   ||||||||||||    
T  35223996 cttctcctctttttcatcttcatatcatctccatcaa-------caacaagaatcccataaaaattctagaagaaaatgaagaaaatctaacgtttttga 35223904  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
     ||||||| ||||||||| |||||||  ||||||||    
T  35223903 attaaaacaaacggaaatgaccaaaatgtgtaacaa 35223868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 7041858 - 7041750
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||| |||||||||||||||||||||||||||||| |||| ||| || || |||||||||| | |||||||||||||| ||| | ||| |||||| |    
T  7041858 cttctccactttttcatcttcatatcatctccatcaaccttcaacaataagaacctcagaaaaattacagaagaaaatgaagaaaacctaatgtttttca 7041759  T
Q  101 gttaaaact 109  Q
     ||||||||    
T  7041758 attaaaact 7041750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 9495252 - 9495175
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaat 78  Q
    |||||| || |||||||||||||||||||||||||||| |||| |||||| |||| |||||||| |||||||||||||    
T  9495252 cttctcgtccttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccagaagaaaat 9495175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 36344118 - 36344243
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||| || ||||||||||||||||||||||||||||| |||  |||||| ||| ||| |||||||| ||||||||||||| |||  |||| ||||||||    
T  36344118 cttcttctttttttcatcttcatatcatctccatcaaccttccacaacaagaatttcaaaaaaaatctagaagaaaatgaagaaaatttaatgtttttga 36344217  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     | |||| ||| |||| | |||||||    
T  36344218 atcaaaattaaaggaattgaccaaaa 36344243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 40032647 - 40032571
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaa 77  Q
    ||||||||||||||||||||||||||||||| |||||| |||| |||||| |||| || ||||| ||||||||||||    
T  40032647 cttctcctctttttcatcttcatatcatctctatcaaccttcaacaacaagaatcccataaaaattccagaagaaaa 40032571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 135
Target Start/End: Complemental strand, 18018008 - 18017885
Alignment:
Q  12 tttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaa 111  Q
    ||||||||| ||||||||  ||||||| |||| |||||| |||| || ||||| ||||||||||||| || |||   |||||||||||| ||||||||||    
T  18018008 tttcatctttatatcatcgtcatcaaccttcaacaacaagaatcccataaaaattccagaagaaaataaagaaaaactaacgtttttgaattaaaactaa 18017909  T
Q  112 cggaaataaccaaaagttgtaaca 135  Q
    ||||||  |||||||  |||||||    
T  18017908 cggaaaggaccaaaatgtgtaaca 18017885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 18621976 - 18621897
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatga 80  Q
    |||||| ||||||||||||| ||||||||||||||||| |||| |||||| |||| |||||||| |||| ||||||||||    
T  18621976 cttctcatctttttcatctttatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccataagaaaatga 18621897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 19302342 - 19302422
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaa 81  Q
    |||| |||||| ||||||||| |||||||||||||||| |||| |||||||||||  ||||||| | ||||||||||||||    
T  19302342 cttcccctcttcttcatcttcctatcatctccatcaaccttcaacaacaaaaatccaagaaaaatttcagaagaaaatgaa 19302422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21515429 - 21515369
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaa 61  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||    
T  21515429 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaa 21515369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 26217294 - 26217182
Alignment:
Q  5 tcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagtta 104  Q
    ||||| ||||||| |||||||||||||||||||| |||| |||||| |||  || ||||| || ||||||||||||| |||    ||||||||| | |||    
T  26217294 tcctcattttcattttcatatcatctccatcaaccttcaacaacaagaattccaaaaaaattcaagaagaaaatgaagaaaatccaacgtttttaaatta 26217195  T
Q  105 aaactaacggaaa 117  Q
    |||||||||||||    
T  26217194 aaactaacggaaa 26217182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 32733936 - 32733824
Alignment:
Q  5 tcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagtta 104  Q
    |||||||||| ||||| ||| ||||||||| ||| |||| |||||| |||| |||||||| | || ||||||||||| ||| | |||| ||||||| |||    
T  32733936 tcctcttttttatctttataacatctccattaaccttcaacaacaagaatcccagaaaaatttcataagaaaatgaagaaaacataacatttttgaatta 32733837  T
Q  105 aaactaacggaaa 117  Q
    ||| |||||||||    
T  32733836 aaattaacggaaa 32733824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 39912074 - 39912193
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatg--aataaaccttaacgttttt 98  Q
    |||||||||||||||||||||||||||||||| ||||  || | |||||| |||| || ||||| || |||||||||||  || |||   ||| ||||||    
T  39912074 cttctcctctttttcatcttcatatcatctccgtcaaactttaacaacaagaatcccaaaaaaattctagaagaaaatgaaaaaaaaatctaatgttttt 39912173  T
Q  99 gagttaaaactaacggaaat 118  Q
    || |||||||||||||||||    
T  39912174 gaattaaaactaacggaaat 39912193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 5416973 - 5417095
Alignment:
Q  5 tcctctttttcatcttcatatcatctccatcaac-tttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagtt 103  Q
    ||||||||||||| |||  || ||||||||| || ||||| |||||| |||  || ||||| | |||||||||||||| ||| | ||||||||||||  |    
T  5416973 tcctctttttcattttcccatgatctccatcgacctttcaacaacaagaattccataaaaatttcagaagaaaatgaagaaaacctaacgtttttgaaat 5417072  T
Q  104 aaaactaacggaaataaccaaaa 126  Q
    ||||||||||||||| |||||||    
T  5417073 aaaactaacggaaatgaccaaaa 5417095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 39240188 - 39240301
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    |||||||||||||||||||||||||||| || ||||| |||| |||||| ||||           ||||||||||||||| ||| | ||||||||||||     
T  39240188 ttctcctctttttcatcttcatatcatccccgtcaaccttcaacaacaagaatc-----------ccagaagaaaatgaagaaaacataacgtttttgaa 39240276  T
Q  102 ttaaaactaacggaaataaccaaaa 126  Q
    ||||||||||||||||  |||||||    
T  39240277 ttaaaactaacggaaaggaccaaaa 39240301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 28206987 - 28206910
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaa-ctttcaccaacaaaaatctcagaaaaaatccagaagaaaa 77  Q
    ||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||  ||||||| | || |||||||    
T  28206987 cttctcctcttcttcatcttcatatcatctccatcaacctttcaacaacaaaaatccaagaaaaattacataagaaaa 28206910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6843715 - 6843661
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatc 55  Q
    ||||||||||||||||||| |||||||||||||||||| |||| |||||| ||||    
T  6843715 cttctcctctttttcatctccatatcatctccatcaaccttcaacaacaataatc 6843661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1825966 - 1826030
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaa 65  Q
    ||||||||| |||||||||||||||||||||| ||||| |||  |||||| |||| |||||||||    
T  1825966 cttctcctccttttcatcttcatatcatctccttcaaccttcgacaacaagaatcccagaaaaaa 1826030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1860411 - 1860475
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaa 65  Q
    ||||||||| |||||||||||||||||||||| ||||| |||  |||||| |||| |||||||||    
T  1860411 cttctcctccttttcatcttcatatcatctccttcaaccttcgacaacaagaatcccagaaaaaa 1860475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 35486091 - 35486015
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaa 77  Q
    |||||||| || |||||||||||||||||||||||||| || | |||||||||||  ||||||| ||  ||||||||    
T  35486091 cttctcctattcttcatcttcatatcatctccatcaaccttgaacaacaaaaatccgagaaaaattcttgaagaaaa 35486015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 119277 - 119211
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||||| ||||| ||| | |||||||||||| ||||||||||||||||| |||||||  |||||||    
T  119277 agaagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaaca 119211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 14920552 - 14920506
Alignment:
Q  89 taacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    |||||||||||| |||||||||||||||||||||||||  |||||||    
T  14920552 taacgtttttgaattaaaactaacggaaataaccaaaatatgtaaca 14920506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 18914417 - 18914459
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttca 43  Q
    ||||||||||||||||||||| |||||||||||||||| ||||    
T  18914417 cttctcctctttttcatcttcgtatcatctccatcaaccttca 18914459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 9495248 - 9495305
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| ||||| ||| | |||||||||||| ||||||||||||||||| |||||||    
T  9495248 agaagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaa 9495305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12873277 - 12873200
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaat 78  Q
    ||||||||||| |||||||||||||||| |||||| || |||| ||| ||||||   ||||||| | |||||||||||    
T  12873277 cttctcctcttcttcatcttcatatcatatccatcgaccttcaacaagaaaaattcaagaaaaatttcagaagaaaat 12873200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 30872944 - 30873020
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaat-ctcagaaaaaatccagaagaaaa 77  Q
    ||||||||||||||||||||||||||||||||  |||| |||| |||||| ||| || | ||||||| ||||||||||    
T  30872944 cttctcctctttttcatcttcatatcatctcc-gcaaccttcaacaacaagaatcctaaaaaaaaattcagaagaaaa 30873020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 35224012 - 35224059
Alignment:
Q  89 taacgtttttgagttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
    |||||||||||| ||||||||||||||||| |||||||  ||||||||    
T  35224012 taacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacaa 35224059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 23244740 - 23244806
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||||| ||||| ||| | |||||||||||| ||||||||||||||||  |||||||  |||||||    
T  23244740 agaagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaaggaccaaaatatgtaaca 23244806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 126
Target Start/End: Original strand, 40094719 - 40094757
Alignment:
Q  88 ttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  40094719 ttaacgtttttgaattaaaactaacggaaatgaccaaaa 40094757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 758569 - 758618
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaat 118  Q
    ||||||| ||||| ||| |||||||||||||| |||||||||| ||||||    
T  758569 agaagaagatgaagaaaacttaacgtttttgaattaaaactaatggaaat 758618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 6843657 - 6843592
Alignment:
Q  70 gaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    |||||||||||| ||| | |||||||||| | ||||||||||| ||||| |||||||  |||||||    
T  6843657 gaagaaaatgaagaaaacctaacgttttttaattaaaactaacagaaatgaccaaaatgtgtaaca 6843592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 28206998 - 28207043
Alignment:
Q  89 taacgtttttgagttaaaactaacggaaataaccaaaagttgtaac 134  Q
    |||||||||||| |||||||||||| |||| ||||||| |||||||    
T  28206998 taacgtttttgaattaaaactaacgtaaatgaccaaaatttgtaac 28207043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 26736371 - 26736407
Alignment:
Q  90 aacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  26736371 aacgtttttgaattaaaactaacggaaatgaccaaaa 26736407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 24605103 - 24604969
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||| ||||||||||||||||||||| |||| |||||| |||| |||||||| |||||||||||||||| ||| | ||||||||||||    
T  24605103 cttctcctctttttcaacttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccagaagaaaatgaagaaaacctaacgtttttga 24605004  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||||||||| |||||||  |||||||    
T  24605003 attaaaactaacggaaatgaccaaaacgtgtaaca 24604969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 33972363 - 33972488
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| | || |||||||| |||||||||||||||| |||  | |||||||||||    
T  33972363 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagattcccagaaaaattccagaagaaaatgaagaaaattcaacgtttttga 33972462  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||| |||||||    
T  33972463 attaaaactaacggaaatgaccaaaa 33972488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 29010182 - 29010058
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||| ||||  ||||||| |||||||||||||||| ||| | ||||||||||||     
T  29010182 ttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcatagaaaaattccagaagaaaatgaagaaaacctaacgtttttgaa 29010083  T
Q  102 ttaaaactaacggaaataaccaaaa 126  Q
    ||||||||||||||||  |||||||    
T  29010082 ttaaaactaacggaaaggaccaaaa 29010058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 11524923 - 11525059
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||||||||||||||||||||||||||  || |||| |||||| |||| || ||||| |||||||||||||||| ||| | |||||||||| |    
T  11524923 cttctcctctttttcatcttcatatcatctccattgaccttcaacaacaagaatcccataaaaattccagaagaaaatgaagaaaacctaacgtttttta 11525022  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaacaag 137  Q
     ||||||||||||||||| |||||||  |||||||||    
T  11525023 attaaaactaacggaaatgaccaaaatgtgtaacaag 11525059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 6220213 - 6220338
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| || | |||||| ||||   |||||| |||| ||||||||||| ||| | ||||||||||||    
T  6220213 cttctcctctttttcatcttcatatcatctccatcaacctttaacaacaagaatcctcgaaaaattccataagaaaatgaagaaaacctaacgtttttga 6220312  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||  |||||||    
T  6220313 attaaaactaacggaaaggaccaaaa 6220338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 31029753 - 31029628
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||| ||||||||||||||||||| |||| |||||| ||||  ||| ||| |||| ||||||||||| ||| | ||||||||||||    
T  31029753 cttctcctctttttcatcctcatatcatctccatcaaccttcaacaacaagaatccgagagaaattccataagaaaatgaagaaaacctaacgtttttga 31029654  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||||| |||| |||||||    
T  31029653 attaaaactaacgaaaatgaccaaaa 31029628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 33544979 - 33545104
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||| ||||  |||| |||||||||||  ||||||| | || ||||||||||| ||| | ||||||||||||    
T  33544979 cttctcctctttttcatcttcatatcatctccgtcaagcttcaacaacaaaaatcctagaaaaatttcaaaagaaaatgaagaaaacctaacgtttttga 33545078  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||  |||||||    
T  33545079 attaaaactaacggaaaggaccaaaa 33545104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 3289147 - 3289043
Alignment:
Q  13 ttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaac 112  Q
    |||||||||||||||||||||||||| |||| |||||| |||| |||||||| |||||||||||||||| ||| | |||||||||||| |||||||||||    
T  3289147 ttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccagaagaaaatgaaaaaaacctaacgtttttgaattaaaactaac 3289048  T
Q  113 ggaaa 117  Q
     ||||    
T  3289047 agaaa 3289043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 13156067 - 13155951
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||||||||||||||||||||||||||||||||||| |||| || ||| ||||||||||||| |||| ||||||||||| ||| | |||||  |||||     
T  13156067 ttctcctctttttcatcttcatatcatctccatcaaccttcaacatcaagaatctcagaaaaattccaaaagaaaatgaagaaaacctaacgaatttgaa 13155968  T
Q  102 ttaaaactaacggaaat 118  Q
    ||||||| |||||||||    
T  13155967 ttaaaacaaacggaaat 13155951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 13160923 - 13160807
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||||||||||||||||||||||||||||||||||| |||| || ||| ||||||||||||| |||| ||||||||||| ||| | |||||  |||||     
T  13160923 ttctcctctttttcatcttcatatcatctccatcaaccttcaacatcaagaatctcagaaaaattccaaaagaaaatgaagaaaacctaacgaatttgaa 13160824  T
Q  102 ttaaaactaacggaaat 118  Q
    ||||||| |||||||||    
T  13160823 ttaaaacaaacggaaat 13160807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 33329433 - 33329325
Alignment:
Q  3 tctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagt 102  Q
    |||||||||||||||||||||||||||||||||||| ||||  ||||| ||||||| ||||| |||| ||||||||||| ||| | |||||||||||| |    
T  33329433 tctcctctttttcatcttcatatcatctccatcaaccttcaagaacaagaatctcaaaaaaattccataagaaaatgaagaaaacctaacgtttttgaat 33329334  T
Q  103 taaaactaa 111  Q
    |||||||||    
T  33329333 taaaactaa 33329325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 35132760 - 35132868
Alignment:
Q  3 tctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagt 102  Q
    |||||||||||||||||||||||||||||||||||| ||||  ||||| |||||| |||||| |||| ||||||||||| ||| | |||||||||||| |    
T  35132760 tctcctctttttcatcttcatatcatctccatcaaccttcaagaacaagaatctctgaaaaattccaaaagaaaatgaagaaaacctaacgtttttgaat 35132859  T
Q  103 taaaactaa 111  Q
    |||||||||    
T  35132860 taaaactaa 35132868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 2949452 - 2949559
Alignment:
Q  5 tcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagtta 104  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||  ||||||| || ||||||||||||| ||| | ||||||| |||| |||    
T  2949452 tcctctttttcatcttcatatcatctccatcaactttcaacaacaagaatcctagaaaaattctagaagaaaatgaagaaaacctaacgttgttgaatta 2949551  T
Q  105 aaactaac 112  Q
    ||||||||    
T  2949552 aaactaac 2949559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 17544610 - 17544726
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||| |||||||||||||||||||||||||| |||| |||||||||||  ||||||| | | |||||||||||| ||| | ||| ||||||||    
T  17544610 cttctcctcttcttcatcttcatatcatctccatcaaccttcaacaacaaaaatccaagaaaaattactgaagaaaatgaagaaaacctaatgtttttga 17544709  T
Q  101 gttaaaactaacggaaa 117  Q
     ||||||||||| ||||    
T  17544710 attaaaactaacagaaa 17544726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 3338705 - 3338589
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||||||||||||| |||||||| |||||| ||||  |||| |||||||| || |||||||| ||||  |||||||||| ||| | ||||||||||||     
T  3338705 ttctcctctttttcaccttcatattatctccgtcaagcttcaacaacaaaattcccagaaaaattccaatagaaaatgaagaaaacgtaacgtttttgaa 3338606  T
Q  102 ttaaaactaacggaaat 118  Q
    |||||||||||||||||    
T  3338605 ttaaaactaacggaaat 3338589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 14337063 - 14337184
Alignment:
Q  5 tcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagtta 104  Q
    |||||||||||||||||||||||||||||||||  ||||  ||||| |||   ||||||| |||||||||||||||| |||   |||||||||||| |||    
T  14337063 tcctctttttcatcttcatatcatctccatcaatcttcaataacaagaattcgagaaaaattccagaagaaaatgaagaaaatctaacgtttttgaatta 14337162  T
Q  105 aaactaacggaaataaccaaaa 126  Q
    ||| |||||||||  |||||||    
T  14337163 aaattaacggaaaagaccaaaa 14337184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 1158820 - 1158708
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaa-ctttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttg 99  Q
    ||||||||||||||||||||||||||||||||||||| |  ||| |||||| |||| |||||||  |||| ||||||||||| |||   |||||||||||    
T  1158820 cttctcctctttttcatcttcatatcatctccatcaacccgtcaacaacaagaatcccagaaaagttccaaaagaaaatgaagaaaatctaacgtttttg 1158721  T
Q  100 agttaaaactaac 112  Q
    | |||||||||||    
T  1158720 aattaaaactaac 1158708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 35119044 - 35118939
Alignment:
Q  8 tctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaa 107  Q
    ||||||||||||||||||||||||||||||| |||| |||||| |||| || ||||| | || ||||||||||| ||| | |||| ||||| | ||||||    
T  35119044 tctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccataaaaatttcataagaaaatgaagaaaacctaacatttttaaattaaaa 35118945  T
Q  108 ctaacg 113  Q
    ||||||    
T  35118944 ctaacg 35118939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 2315732 - 2315803
Alignment:
Q  8 tctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatg 79  Q
    |||| ||||||||||||||||||| |||||| |||| |||||||||||  ||||||| ||||||||||||||    
T  2315732 tcttcttcatcttcatatcatctcaatcaaccttcaacaacaaaaatcaaagaaaaattccagaagaaaatg 2315803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 31754362 - 31754441
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaa 81  Q
    ||||| |||||||||||||||||||||||| |||||| |||| ||| || |||| |||||||| || |||||||||||||    
T  31754362 ttctcatctttttcatcttcatatcatctctatcaaccttcaacaataagaatcccagaaaaattcgagaagaaaatgaa 31754441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 1860703 - 1860768
Alignment:
Q  61 aaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| ||||||||||||| ||| |||||||||||||| |||| |||||||||||| |||||||    
T  1860703 aaaaatctagaagaaaatgaagaaaacttaacgtttttgaattaagactaacggaaatgaccaaaa 1860768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 24548398 - 24548523
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||| | |||||||||| ||||||||| ||||| |||| ||||||||||   ||||||| || |||||||||  || |||   ||||||||||||    
T  24548398 cttctcctcctcttcatcttcacatcatctccgtcaaccttcaacaacaaaaattcgagaaaaattcgagaagaaaagaaagaaaatctaacgtttttga 24548497  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||||| |||  |||||||    
T  24548498 attaaaactaacgaaaaggaccaaaa 24548523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 33346631 - 33346743
Alignment:
Q  8 tctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaa 107  Q
    ||||||||||||||||||||| ||||||||| |||| |||||| |||| || ||||| | || ||||||||||| ||| | |||| |||||   ||||||    
T  33346631 tctttttcatcttcatatcatttccatcaaccttcaacaacaagaatcccataaaaatttcataagaaaatgaagaaaacctaacatttttatattaaaa 33346730  T
Q  108 ctaacggaaataa 120  Q
     ||||| ||||||    
T  33346731 ttaacgaaaataa 33346743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 135
Target Start/End: Complemental strand, 25551552 - 25551442
Alignment:
Q  25 tcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaa 124  Q
    |||||||||||||| |||| || ||| |||| ||| |||| | || ||||||||||| ||| | ||| |||||||| ||||||||||||||||  |||||    
T  25551552 tcatctccatcaaccttcaacagcaagaatcccagcaaaatttcacaagaaaatgaagaaaacataatgtttttgaattaaaactaacggaaaggaccaa 25551453  T
Q  125 aagttgtaaca 135  Q
    ||  |||||||    
T  25551452 aatgtgtaaca 25551442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 29999570 - 29999647
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaat 78  Q
    ||||||||||| ||||||||| |||||||||||||||  || | |||||||||||  || |||| | |||||||||||    
T  29999570 cttctcctcttcttcatcttcgtatcatctccatcaatctttaacaacaaaaatccgaggaaaatttcagaagaaaat 29999647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 33544983 - 33544917
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||||| ||||| ||| | |||| ||||||| ||||||||||||||||| |||||||  |||||||    
T  33544983 agaagaagatgaagaaaacctaacctttttgaattaaaactaacggaaatgaccaaaatgtgtaaca 33544917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 126
Target Start/End: Complemental strand, 12903362 - 12903325
Alignment:
Q  89 taacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  12903362 taacgtttttgaattaaaactaacggaaatgaccaaaa 12903325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 13156084 - 13156121
Alignment:
Q  89 taacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  13156084 taacgtttttgaattaaaactaacggaaatgaccaaaa 13156121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 13160940 - 13160977
Alignment:
Q  89 taacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  13160940 taacgtttttgaattaaaactaacggaaatgaccaaaa 13160977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 44612640 - 44612774
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| |||||||||||||||| ||| | ||||||||||||    
T  44612640 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccagaagaaaatgaagaaaacctaacgtttttga 44612739  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||||||||  |||||||  |||||||    
T  44612740 attaaaactaacggaaaggaccaaaatgtgtaaca 44612774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 32933748 - 32933883
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| || ||||||||||||| ||| | |||||||||| |    
T  32933748 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattctagaagaaaatgaacaaaacctaacgtttttta 32933847  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
     ||||||||||||||||  |||||||  ||||||||    
T  32933848 attaaaactaacggaaaggaccaaaatgtgtaacaa 32933883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 31450895 - 31450761
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||| ||||| ||| |||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||| ||| | ||||||||||||    
T  31450895 cttctccacttttccattttcatatcatctccatcaaccttcaacaacaagaatctcagaaaaaatccagaagaaaatgaagaaaacctaacgtttttga 31450796  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||| ||||  |||||||  |||||||    
T  31450795 attaaaactaacagaaaggaccaaaatgtgtaaca 31450761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 28631503 - 28631378
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||| ||||||||||||||| |||| |||||| ||||  ||||||||| |||||||||||||| ||| | ||||||||||||    
T  28631503 cttctcctctttttcatcttcagatcatctccatcaaccttcaacaacaagaatcctagaaaaaattcagaagaaaatgaagaaaacctaacgtttttga 28631404  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||| ||||||| |||||||    
T  28631403 attaaaactatcggaaatgaccaaaa 28631378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 33819553 - 33819678
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||| |||||||||||||||||||||||||  |||| |||||| ||||||||||||| | |||||||||||||| ||| | |||| |||||||    
T  33819553 cttctcctcttattcatcttcatatcatctccatcaatcttcaacaacaagaatctcagaaaaatttcagaagaaaatgaagaaaacctaacatttttga 33819652  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||||||||||| ||||||    
T  33819653 attaaaactaacggaaatagccaaaa 33819678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13354334 - 13354450
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| |||| ||||||||||| ||| | ||||||||||||    
T  13354334 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaataatcccagaaaaattccaaaagaaaatgaagaaaacctaacgtttttga 13354433  T
Q  101 gttaaaactaacggaaa 117  Q
     ||||||||||| ||||    
T  13354434 attaaaactaacagaaa 13354450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 41659974 - 41659858
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||| || |||||||||||||||||||||||||| |||| |||||||||||  ||||||| |||||||||||||||| ||| | ||||||||||||    
T  41659974 cttctccttttcttcatcttcatatcatctccatcaaccttcaacaacaaaaatccgagaaaaattccagaagaaaatgaagaaaacctaacgtttttga 41659875  T
Q  101 gttaaaactaacggaaa 117  Q
     ||||||||||||||||    
T  41659874 attaaaactaacggaaa 41659858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 12304013 - 12303880
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||| |||  |||||||| |||||||||||||||| ||| | ||| ||||||||     
T  12304013 ttctcctctttttcatcttcatatcatctccatcaactttcaacagcaagaattccagaaaaattccagaagaaaatgaagaaaacctaatgtttttgaa 12303914  T
Q  102 ttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     |||||||||||||||  |||||||  |||||||    
T  12303913 ataaaactaacggaaaggaccaaaatgtgtaaca 12303880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 25642425 - 25642550
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||||||||||||||||| |||| ||||||| |||| ||| || |||| |||||||| |||| ||||||||||| ||| | ||||||||||||    
T  25642425 cttctcctctttttcatcttcatattatcttcatcaaccttcaacaagaagaatcccagaaaaattccacaagaaaatgaagaaaacctaacgtttttga 25642524  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||| |||||||    
T  25642525 attaaaactaacggaaatgaccaaaa 25642550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 28203089 - 28202964
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| ||||  ||||||| |||||||||| ||||| ||| | ||||||| ||||    
T  28203089 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcctagaaaaattccagaagaagatgaagaaaacctaacgttattga 28202990  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||||| ||| ||||||||    
T  28202989 attaaaactaacgaaaagaaccaaaa 28202964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 4104316 - 4104432
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||  |||||||| |||| ||||||||||| |||   ||||||||||||    
T  4104316 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaattccagaaaaattccaaaagaaaatgaagaaaatctaacgtttttga 4104415  T
Q  101 gttaaaactaacggaaa 117  Q
     ||||||||||||||||    
T  4104416 attaaaactaacggaaa 4104432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 34820506 - 34820374
Alignment:
Q  3 tctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagt 102  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||| || |||| || ||||| |||| ||||||||||| ||| |||||||||||||| |    
T  34820506 tctcctctttttcatcttcatatcacctccatcaaccttcaacaataagaatcccataaaaattccaaaagaaaatgaagaaaacttaacgtttttgaat 34820407  T
Q  103 taaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||||||||| |||| |||||||  |||||||    
T  34820406 taaaactaacgaaaatgaccaaaatgtgtaaca 34820374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 27476525 - 27476640
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||||  ||||| |||||| |||||||||||||||| |||   ||||||| ||||     
T  27476525 ttctcctctttttcatcttcatatcatctctatcaactttcaacaacaagtatctctgaaaaattccagaagaaaatgaagaaaatctaacgttcttgat 27476624  T
Q  102 ttaaaactaacggaaa 117  Q
    ||||||||||||||||    
T  27476625 ttaaaactaacggaaa 27476640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 43183812 - 43183678
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||| |||| |||||||| ||| |||||||||||| |||   ||||||||||||    
T  43183812 cttctcctctttttcatcttcatatcatctccatcacccttcaacaacaagaatcccagaaaaattcctgaagaaaatgaagaaaatataacgtttttga 43183713  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||| ||||  |||||||  |||||||    
T  43183712 attaaaactaacagaaaggaccaaaatgtgtaaca 43183678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 39912785 - 39912917
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaa-----taaaccttaacgtt 95  Q
    ||||||||||||||||||||||||||||||||||||||       |||||||||| |||||||| ||||||| ||||||||     |||||| |||||||    
T  39912785 cttctcctctttttcatcttcatatcatctccatcaac-------aacaaaaatcccagaaaaattccagaacaaaatgaagaaattaaaccctaacgtt 39912877  T
Q  96 tttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||| ||||||||||||||||| |||||||| |||||||    
T  39912878 tttgaattaaaactaacggaaatgaccaaaaggtgtaaca 39912917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 40694344 - 40694457
Alignment:
Q  13 ttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaac 112  Q
    ||||||||||||| ||||||| |||| |||| |||||| |||| |||||||||| |||||||||||||| ||| | |||||||||||| |||||||||||    
T  40694344 ttcatcttcatattatctccaccaaccttcaacaacaagaatcccagaaaaaattcagaagaaaatgaagaaaacctaacgtttttgaattaaaactaac 40694443  T
Q  113 ggaaataaccaaaa 126  Q
    |||||| |||||||    
T  40694444 ggaaatgaccaaaa 40694457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 34127793 - 34127678
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||||||||||||||||| |||||| |||||||||| |||| |||||| |||| |||||||| |||| ||||||||||| ||| | ||||||||||||     
T  34127793 ttctcctctttttcatcttaatatcaactccatcaaccttcaacaacaagaatcccagaaaaattccataagaaaatgaagaaaac-taacgtttttgaa 34127695  T
Q  102 ttaaaactaacggaaat 118  Q
    |||||||||||||||||    
T  34127694 ttaaaactaacggaaat 34127678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 41377573 - 41377449
Alignment:
Q  11 ttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaacta 110  Q
    |||||||||||||||||||||||||||  |||| |||||| |||| |||||||| || ||||||||||||| ||| | |||||||||||| |||||||||    
T  41377573 ttttcatcttcatatcatctccatcaatcttcaacaacaataatcccagaaaaattctagaagaaaatgaagaaaacctaacgtttttgaattaaaacta 41377474  T
Q  111 acggaaataaccaaaagttgtaaca 135  Q
    |||||||  |||||||  |||||||    
T  41377473 acggaaaggaccaaaatctgtaaca 41377449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 4120920 - 4121037
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||||||||| |||||||||||||||||||| |||| |||||| |||| || ||||| |||| ||||||||||| ||| | | ||||||||||    
T  4120920 cttctcctctttttcatattcatatcatctccatcaaccttcaacaacaagaatcccaaaaaaattccaaaagaaaatgaagaaaacctgacgtttttga 4121019  T
Q  101 gttaaaactaacggaaat 118  Q
     |||||||||||| ||||    
T  4121020 cttaaaactaacgaaaat 4121037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 39454671 - 39454555
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||| |||| |||||||||||||||||||||         | ||||||||||||    
T  39454671 cttctcctctttttcatcttcatatcatctccatcaatcttcaacaacaagaatcgcagaaaaaatccagaagaaaa---------cctaacgtttttga 39454581  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||| |||||||    
T  39454580 attaaaactaacggaaatgaccaaaa 39454555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 44915896 - 44916021
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||  ||||||||||  ||||||| | |||||||||||||| ||| | | ||||||||||    
T  44915896 cttctcctcttcttcatcttcatatcatttccatcaaccttcaataacaaaaatccgagaaaaatttcagaagaaaatgaagaaaacctcacgtttttga 44915995  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||  |||||||    
T  44915996 attaaaactaacggaaaggaccaaaa 44916021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 21470524 - 21470390
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||| ||||||||| ||||||||||||||||||  ||| |||||| |||| |||||||| |||| ||||||||||| ||| | ||| ||||||||    
T  21470524 cttctcctcattttcatctccatatcatctccatcaaccatcaacaacaagaatcccagaaaaattccaaaagaaaatgaagaaaacctaatgtttttga 21470425  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||| ||||  |||||||  |||||||    
T  21470424 attaaaactaacagaaaggaccaaaatgtgtaaca 21470390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 27246212 - 27246102
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||| ||||| |||||||||||| ||||||| |||| |||||||||||  ||||||| |||||||||||||||| ||| | |||||||||| |    
T  27246212 cttctcctcttcttcattttcatatcatcttcatcaaccttcaacaacaaaaatccgagaaaaattccagaagaaaatgaagaaaacctaacgtttttta 27246113  T
Q  101 gttaaaactaa 111  Q
     ||||||||||    
T  27246112 attaaaactaa 27246102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 16261027 - 16261152
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||| |||||||||||||||||||||||||||| || | ||||||||||| |  ||||| || ||||||||||||| ||| | ||| ||||||||    
T  16261027 cttctcctccttttcatcttcatatcatctccatcaacctttaacaacaaaaatccccaaaaaattctagaagaaaatgaagaaaacctaatgtttttga 16261126  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||||  |||| |||||||    
T  16261127 attaaaactaaccaaaatgaccaaaa 16261152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 16655835 - 16655710
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||  | ||||||||| |||| ||| || |||| || ||||| || ||||||||||||| ||| | ||||||||||||    
T  16655835 cttctcctctttttcatcttcatattgtttccatcaaccttcaacaataagaatcccataaaaattcaagaagaaaatgaagaaaacctaacgtttttga 16655736  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||  |||||||    
T  16655735 attaaaactaacggaaaggaccaaaa 16655710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 27132739 - 27132615
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||| ||||||||||||||||||||||||||| |||| |||||| |||| |||||||| || || |||||||||| ||| | ||| ||||||||    
T  27132739 cttctcctctatttcatcttcatatcatctccatcaaccttcaacaacaagaatcgcagaaaaattctag-agaaaatgaagaaaacctaatgtttttga 27132641  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||| ||||||  |||||||    
T  27132640 attaaaactatcggaaaggaccaaaa 27132615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 16736259 - 16736389
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||||||||||||||||||||||||||| ||||||| || |   |||| |||| |||||||| |||| ||||||||||| ||| | |||||||| |||     
T  16736259 ttctcctctttttcatcttcatatcatcttcatcaaccttta---acaagaatcccagaaaaattccaaaagaaaatgaagaaaacctaacgtttctgaa 16736355  T
Q  102 ttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||||||||||||||  |||||||  |||||||    
T  16736356 ttaaaactaacggaaaggaccaaaatgtgtaaca 16736389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 27914122 - 27914012
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||| |||| |||||||||||||||||||||||||| |||| |||||| |||   ||||||| |||||||||||||||| ||||| ||| ||||||||    
T  27914122 cttctcatcttcttcatcttcatatcatctccatcaaccttcaacaacaataattcgagaaaaattccagaagaaaatgaaaaaacc-taatgtttttga 27914024  T
Q  101 gttaaaactaac 112  Q
     |||||||||||    
T  27914023 attaaaactaac 27914012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 20908736 - 20908615
Alignment:
Q  5 tcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagtta 104  Q
    ||||||||||||| ||||||| |||||||||||| |||| |||||| |||| || ||||  | || ||||||||||| ||| | |||||||||||| |||    
T  20908736 tcctctttttcattttcatatgatctccatcaaccttcaacaacaagaatcccataaaagtttcaaaagaaaatgaagaaaacctaacgtttttgaatta 20908637  T
Q  105 aaactaacggaaataaccaaaa 126  Q
    |||||||||||||  |||||||    
T  20908636 aaactaacggaaaggaccaaaa 20908615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 16350240 - 16350313
Alignment:
Q  4 ctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaa 77  Q
    |||||||| |||||||||||||||||||||||||| |||| |||||||||||| ||||||| | ||||||||||    
T  16350240 ctcctcttcttcatcttcatatcatctccatcaaccttcaacaacaaaaatctaagaaaaatttcagaagaaaa 16350313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 32503704 - 32503780
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaat 78  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||| ||||  ||||||| || ||||||||||    
T  32503704 ttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaataatcctagaaaaattcgagaagaaaat 32503780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 5961827 - 5961898
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaag 73  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| | ||||||    
T  5961827 ttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcagaag 5961898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 10833263 - 10833200
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaa 64  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| ||||||||    
T  10833263 cttctcctctttttcatcatcatatcatctccatcaaccttcaccaacaagaatcccagaaaaa 10833200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 14877706 - 14877585
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||| ||| |||| |||||| ||| |   ||||| | ||||||||||| || ||| |   ||||||||||    
T  14877706 cttctcctctttttcatcttcatatcatctccat-aaccttcaacaacaagaattttgaaaaaatttcagaagaaaattaagaaaac---acgtttttga 14877611  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||| |||||||    
T  14877610 attaaaactaacggaaattaccaaaa 14877585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 18565279 - 18565170
Alignment:
Q  5 tcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagtta 104  Q
    |||||||||||||||||||||||||||||||||| ||   |||||| |||| |||||||| |||||||||||||          |||||||||||| |||    
T  18565279 tcctctttttcatcttcatatcatctccatcaacctt---caacaagaatcccagaaaaattccagaagaaaat---------ctaacgtttttgaatta 18565192  T
Q  105 aaactaacggaaataaccaaaa 126  Q
    |||||||||||||| |||||||    
T  18565191 aaactaacggaaatgaccaaaa 18565170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 27883625 - 27883739
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||| ||||||||||||||||||||||||||||| |||| |||||| ||||           ||||||||||||||| |||   ||||||||||||    
T  27883625 cttctcctttttttcatcttcatatcatctccatcaaccttcaacaacaagaatc-----------ccagaagaaaatgaagaaaatctaacgtttttga 27883713  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||| |||||||    
T  27883714 attaaaactaacggaaatgaccaaaa 27883739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 17856417 - 17856292
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||| | |||||||| |||||||||||||||||||| |||| |||||||||||||           ||||||||||||| ||| | ||||||||||||    
T  17856417 cttctcttatttttcattttcatatcatctccatcaaccttcaacaacaaaaatctc-----------agaagaaaatgaagaaaacctaacgtttttga 17856329  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaacaag 137  Q
     ||||||||||||||||  |||||||  |||||||||    
T  17856328 attaaaactaacggaaaagaccaaaatgtgtaacaag 17856292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 37744584 - 37744670
Alignment:
Q  40 ttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    |||| |||||| |||| |||||||| | |||||||||||||| ||| | |||||||||||| ||||||||||||||||| |||||||    
T  37744584 ttcaacaacaataatcacagaaaaatttcagaagaaaatgaagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaa 37744670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 5921613 - 5921561
Alignment:
Q  3 tctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatc 55  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  5921613 tctcctctttttcatcttcatatcatctccatcaactttcaacaacaagaatc 5921561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 36211507 - 36211583
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaa 77  Q
    |||||||| ||||||||||||||||||||||||||||| |||| |||||  ||||  ||||||| ||||||||||||    
T  36211507 cttctcctttttttcatcttcatatcatctccatcaaccttcaacaacatgaatccaagaaaaattccagaagaaaa 36211583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 37412812 - 37412697
Alignment:
Q  11 ttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaacta 110  Q
    ||||| ||||| ||| |||||| ||||| |||| |||||| ||||||| ||||| | |||||||||||||| ||| | ||||| |||||| |||||||||    
T  37412812 ttttcttcttcgtattatctccgtcaaccttcaacaacaagaatctcaaaaaaatttcagaagaaaatgaagaaaacctaacgcttttgaattaaaacta 37412713  T
Q  111 acggaaataaccaaaa 126  Q
    ||| ||| ||| ||||    
T  37412712 acgaaaagaactaaaa 37412697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 36442359 - 36442237
Alignment:
Q  5 tcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacg-tttttgagtt 103  Q
    ||||||||||||| ||||||| |||||||||||| |||| |||||| |||  || ||||| | |||||||||||||| |||   ||||| ||||| | ||    
T  36442359 tcctctttttcattttcatatgatctccatcaaccttcaacaacaagaatgccataaaaatttcagaagaaaatgaagaaaatctaacgtttttttaatt 36442260  T
Q  104 aaaactaacggaaataaccaaaa 126  Q
    ||||||||||||||  |||||||    
T  36442259 aaaactaacggaaaggaccaaaa 36442237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 12304382 - 12304341
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttca 43  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  12304382 ttctcctctttttcatcttcatatcatctccatcaactttca 12304341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11943721 - 11943666
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatct 56  Q
    |||||||||||||||||||||||||||||||||||||| || | |||||| |||||    
T  11943721 cttctcctctttttcatcttcatatcatctccatcaacatttaacaacaagaatct 11943666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 38275680 - 38275746
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||||||||||| ||| | |||||||||||| ||||||||||||||||| |||||||  |||||||    
T  38275680 agaagaaaatgaagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaaca 38275746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 27883629 - 27883572
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||||||||| ||| | |||||||||||| ||||||||||||||||| |||||||    
T  27883629 agaagaaaatgaagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaa 27883572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 39150001 - 39150038
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaac 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  39150001 cttctcctctttttcatcttcatatcatctccatcaac 39150038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 35408705 - 35408812
Alignment:
Q  19 ttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaat 118  Q
    |||||||||||||||||||| |||| |||||||||||  ||||||| | |||||||||||          |||||||||||| ||||||||||||||||     
T  35408705 ttcatatcatctccatcaaccttcaacaacaaaaatccgagaaaaatttcagaagaaaat---------ctaacgtttttgaattaaaactaacggaaag 35408795  T
Q  119 aaccaaaagttgtaaca 135  Q
     |||||||  |||||||    
T  35408796 gaccaaaatgtgtaaca 35408812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 39150005 - 39149938
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
    ||||||| ||||| ||| | |||||||||||| ||||||||||||||||| |||||||  ||||||||    
T  39150005 agaagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacaa 39149938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 37412804 - 37412869
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||||||||||| ||| || ||||||||||| ||||||||||||||||| |||||||  |||||||    
T  37412804 agaagaaaatgaaaaaatct-aacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaaca 37412869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 44915900 - 44915843
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| ||||| |||  ||||||||||||| ||||||||||||||||| |||||||    
T  44915900 agaagaagatgaagaaaatttaacgtttttgaattaaaactaacggaaatgaccaaaa 44915843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 15137029 - 15137077
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaa 117  Q
    ||||||||||||| ||| | |||||||||||| ||||||||||||||||    
T  15137029 agaagaaaatgaagaaaacctaacgtttttgaattaaaactaacggaaa 15137077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 32933752 - 32933685
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
    ||||||| ||||| ||| | | |||||||||| ||||||||||||||||| |||||||  ||||||||    
T  32933752 agaagaagatgaagaaaacctgacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacaa 32933685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 5921632 - 5921678
Alignment:
Q  90 aacgtttttgagttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
    ||||||||||| ||||||||||||||||| |||||||  ||||||||    
T  5921632 aacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaacaa 5921678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 13354338 - 13354281
Alignment:
Q  69 agaagaaaatgaa-taaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| ||||| ||||||| ||||||||||| ||||||||||||||||| |||||||    
T  13354338 agaagaagatgaagtaaacct-aacgtttttgaattaaaactaacggaaatgaccaaaa 13354281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 28203085 - 28203151
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||||| ||||| ||| | |||||||||||| |||||| |||||||||| |||||||  |||||||    
T  28203085 agaagaagatgaagaaaacctaacgtttttgaattaaaattaacggaaatgaccaaaatgtgtaaca 28203151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 39454667 - 39454716
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaat 118  Q
    ||||||| ||||| ||||| |||||||||||| |||||||||||| ||||    
T  39454667 agaagaagatgaagaaaccctaacgtttttgaattaaaactaacgaaaat 39454716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 136
Target Start/End: Original strand, 41377581 - 41377646
Alignment:
Q  71 aagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
    ||||| ||||| ||| | |||||||||||| |||||||||||| |||| |||||||  ||||||||    
T  41377581 aagaagatgaagaaaacctaacgtttttgaattaaaactaacgaaaatgaccaaaatgtgtaacaa 41377646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 43183808 - 43183865
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    |||||||||| || ||| | |||||||||||| ||||| ||||||||||| |||||||    
T  43183808 agaagaaaataaagaaaacctaacgtttttgaattaaatctaacggaaatgaccaaaa 43183865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 7e-39; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 54136248 - 54136373
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| | |||||||||||||| ||||| ||| ||||||||    
T  54136248 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcagaagaaaatgaaaaaaccctaatgtttttga 54136347  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||| |||||||    
T  54136348 attaaaactaacggaaatgaccaaaa 54136373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 34958988 - 34959122
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| || | ||||||||||| |||||||||| || ||||||||||| ||| | |||| |||||||    
T  34958988 cttctcctctttttcatcttcatatcatctccatcaaccttgaacaacaaaaatcccagaaaaaatacataagaaaatgaagaaaacctaacatttttga 34959087  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||||||||| |||||||  |||||||    
T  34959088 attaaaactaacggaaatgaccaaaatgtgtaaca 34959122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 1157363 - 1157488
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||||||||||||||||| |||||||||||| |||| |||||| |||| |||||||| |||| ||||||||||| ||| | ||||||||||||    
T  1157363 cttctcctctttttcatcttcatataatctccatcaaccttcaacaacaagaatcccagaaaaattccaaaagaaaatgaagaaaacctaacgtttttga 1157462  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||||| |||| |||||||    
T  1157463 attaaaactaacgaaaatgaccaaaa 1157488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 24504097 - 24504222
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||| ||| ||||||||| || ||||||||||||| |||   ||||||||||||    
T  24504097 cttctcctttttttcatcttcatatcatctccatcaactttcaacaacaagaatttcagaaaaattcaagaagaaaatgaagaaaaactaacgtttttga 24504196  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||| |||||| |||||||    
T  24504197 attaaaactaatggaaatgaccaaaa 24504222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 25218241 - 25218375
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| ||||  | ||||  |||||||||||||||| |||   ||||||||||||    
T  25218241 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcctaaaaaagttccagaagaaaatgaagaaaatctaacgtttttga 25218340  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||||||||| |||||||  |||||||    
T  25218341 attaaaactaacggaaatgaccaaaatgtgtaaca 25218375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 29864333 - 29864466
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| || |||| ||||||||||||   ||||||||||||    
T  29864333 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattctagaa-aaaatgaataaaatctaacgtttttga 29864431  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||||||||  |||||||  |||||||    
T  29864432 attaaaactaacggaaaagaccaaaatgtgtaaca 29864466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 22830954 - 22831079
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||| |||||| |||||||||||||||||||| ||||| |||| ||||||||||| ||| |||| | |||||||||||||| ||||| ||||||||||||    
T  22830954 cttcccctcttcttcatcttcatatcatctccttcaaccttcaacaacaaaaatcccaggaaaatttcagaagaaaatgaagaaaccctaacgtttttga 22831053  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||  |||||||    
T  22831054 attaaaactaacggaaaggaccaaaa 22831079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 27347826 - 27347701
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||| ||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| || ||||||||||||| ||| | ||||||||||||    
T  27347826 cttcacctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattctagaagaaaatgaagaaaacctaacgtttttga 27347727  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||| |||||  |||||||    
T  27347726 attaaaactaatggaaaggaccaaaa 27347701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 45683274 - 45683399
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||||||||||||||||||||||||| |||| |||| |||||| |||| |||||||| |||| ||||||||||| ||| | ||||||||||||    
T  45683274 cttctcctctttttcatcttcatatcatctccaccaaccttcaacaacaagaatcccagaaaaattccataagaaaatgaagaaaacctaacgtttttga 45683373  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||| ||||  |||||||    
T  45683374 attaaaactaaccgaaaggaccaaaa 45683399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 52915181 - 52915047
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||   ||||||||||||||| ||| | ||||||||||||    
T  52915181 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaagtgccagaagaaaatgaagaaaacctaacgtttttga 52915082  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     |||||| |||| ||||  |||||||  |||||||    
T  52915081 attaaaattaaccgaaaggaccaaaatgtgtaaca 52915047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 21218076 - 21217951
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| | |||| |||| || ||||| || ||||||||||||| ||| | ||||| ||||||    
T  21218076 cttctcctctttttcatcttcatatcatctccatcaaccttcaaccacaagaatcccaaaaaaattctagaagaaaatgaagaaaacctaacgcttttga 21217977  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||||| ||| ||||||||    
T  21217976 attaaaactaacgaaaagaaccaaaa 21217951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 29970420 - 29970307
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||||||||||||||||||||| ||||||||||||| |||| |||||| |||| |||||||| | || ||||||||||| ||| | ||||||||||||     
T  29970420 ttctcctctttttcatcttcataacatctccatcaaccttcaacaacaagaatcccagaaaaatttcataagaaaatgaagaaagcctaacgtttttgaa 29970321  T
Q  102 ttaaaactaacgga 115  Q
    ||||||||||||||    
T  29970320 ttaaaactaacgga 29970307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 33882106 - 33882231
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||| |||||||||||||||||||||||||||||||  |||| |||||| ||||  | |||||||||||||||||||||| ||| | ||||||||||||    
T  33882106 cttcttctctttttcatcttcatatcatctccatcaaacttcaacaacaagaatccaaaaaaaaatccagaagaaaatgaagaaaacctaacgtttttga 33882205  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||| |||||||||||  |||||||    
T  33882206 attaagactaacggaaaggaccaaaa 33882231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 46200642 - 46200767
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||| ||||||| |||| |||||| |||| || ||||| | |||||||||||||| ||| | ||||| ||||||    
T  46200642 cttctcctctttttcatcttcatatcatcttcatcaaccttcaacaacaagaatcccaaaaaaatttcagaagaaaatgaagaaaacctaacgcttttga 46200741  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||||| ||| ||||||||    
T  46200742 attaaaactaacgaaaagaaccaaaa 46200767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 40067509 - 40067639
Alignment:
Q  5 tcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagtta 104  Q
    ||||||||||||| ||||||| |||||||||||| |||| |||||| |||| || ||||| | |||||||||||||| ||| | |||||||||||| |||    
T  40067509 tcctctttttcattttcatatgatctccatcaaccttcaacaacaagaatcccataaaaatttcagaagaaaatgaagaaaacctaacgtttttgaatta 40067608  T
Q  105 aaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||||||| |||| |||||||  |||||||    
T  40067609 aaactaacgaaaatgaccaaaatgtgtaaca 40067639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 9657884 - 9657779
Alignment:
Q  13 ttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaac 112  Q
    |||||||||||||||||||||||||| |||| |||||||||||  ||||||||| ||||| |||||||| | | | |||||||||||| |||||||||||    
T  9657884 ttcatcttcatatcatctccatcaaccttcaacaacaaaaatccgagaaaaaattcagaaaaaaatgaaaataacctaacgtttttgaattaaaactaac 9657785  T
Q  113 ggaaat 118  Q
    ||||||    
T  9657784 ggaaat 9657779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 43317036 - 43317161
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||  |||||||| | ||||||||||||||  || | |||||||||| |    
T  43317036 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaattccagaaaaatttcagaagaaaatgaaggaaacctaacgtttttca 43317135  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||| |||||||||  |||||||    
T  43317136 attaaaattaacggaaaggaccaaaa 43317161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 25059062 - 25058946
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||| ||||||||||||||||||||||| |||| |||| | ||||  |||||||  ||||||||||||||| |||   ||||||||||||    
T  25059062 cttctcctcttttttatcttcatatcatctccatcaaccttcaacaacgagaatcctagaaaaataccagaagaaaatgaagaaaagctaacgtttttga 25058963  T
Q  101 gttaaaactaacggaaa 117  Q
     ||||||||||||||||    
T  25058962 attaaaactaacggaaa 25058946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 4966097 - 4965966
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||| |||||||| ||||||||||||||||||||||  |||| |||| | |||  |||||||| |||||||||||||||  ||||| ||||||||||||    
T  4966097 cttcttctctttttaatcttcatatcatctccatcaatcttcaacaacgagaattccagaaaaattccagaagaaaatga--aaacc-taacgtttttga 4966001  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||||||||| |||||||  |||||||    
T  4966000 attaaaactaacggaaatgaccaaaatgtgtaaca 4965966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 10014622 - 10014745
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||||||||| ||||||||||||||||||||| ||| |||| |||||| |||  |||||||| ||||||||||||| || |||   |||||| |||||     
T  10014622 ttctcctctttctcatcttcatatcatctccataaaccttcaacaacaagaattccagaaaaattccagaagaaaataaagaaaagctaacgtgtttgaa 10014721  T
Q  102 ttaaaactaacggaaataaccaaa 125  Q
    ||||||||||||||||| ||||||    
T  10014722 ttaaaactaacggaaatgaccaaa 10014745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 10021763 - 10021886
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||||||||| ||||||||||||||||||||| ||| |||| |||||| |||  |||||||| ||||||||||||| || |||   |||||| |||||     
T  10021763 ttctcctctttctcatcttcatatcatctccataaaccttcaacaacaagaattccagaaaaattccagaagaaaataaagaaaagctaacgtgtttgaa 10021862  T
Q  102 ttaaaactaacggaaataaccaaa 125  Q
    ||||||||||||||||| ||||||    
T  10021863 ttaaaactaacggaaatgaccaaa 10021886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 1205606 - 1205493
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||| || |||| |||||||| | |||||||||||||| ||| |  || |||||| |    
T  1205606 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaataagaatcccagaaaaatttcagaagaaaatgaagaaaacccaatgtttttta 1205507  T
Q  101 gttaaaactaacgg 114  Q
     |||||||||||||    
T  1205506 attaaaactaacgg 1205493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 44170136 - 44170261
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||| |||||| ||||||||||||||| || |||| || |||| ||||||||| ||| |||||| |||||||||||||||| ||||  |||||||||| |    
T  44170136 cttcccctcttcttcatcttcatatcaccttcatctaccttcaacaacaaaaacctccgaaaaattccagaagaaaatgaaaaaactctaacgtttttaa 44170235  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||  |||||||    
T  44170236 attaaaactaacggaaaggaccaaaa 44170261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 46621156 - 46621031
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||  | ||||||||| |||| ||| || |||| || ||||| ||||||| |||||||| ||| | ||||||||||||    
T  46621156 cttctcctctttttcatcttcatattgtttccatcaaccttcaacaataagaatcccataaaaattccagaaaaaaatgaagaaaacctaacgtttttga 46621057  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||| |||||||||| |||||||    
T  46621056 attaaaaataacggaaatgaccaaaa 46621031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 44710560 - 44710672
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||  |||  ||||||| |||||||||||||||| |||   |||| |||||||    
T  44710560 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagtatcctagaaaaattccagaagaaaatgaagaaaatctaacttttttga 44710659  T
Q  101 gttaaaactaacg 113  Q
     ||||||| ||||    
T  44710660 attaaaaccaacg 44710672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 21051580 - 21051463
Alignment:
Q  8 tctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaa 107  Q
    |||||||||||||||| |||||||||||||| |||| |||||  |||| || ||||||||||||| |||||||| ||| | |||||||||||| |||||     
T  21051580 tctttttcatcttcatgtcatctccatcaaccttcaacaacacgaatccca-aaaaaatccagaaaaaaatgaagaaaacctaacgtttttgaattaaat 21051482  T
Q  108 ctaacggaaataaccaaaa 126  Q
     |||||||||| |||||||    
T  21051481 ttaacggaaatgaccaaaa 21051463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 33626093 - 33625959
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||  | | ||||||  |||| ||| || |||| || ||||| |||||||||||||||| ||| | ||||||||||||    
T  33626093 cttctcctctttttcatcttcatattgttttcatcaaacttcaacaataagaatcccataaaaattccagaagaaaatgaagaaaacctaacgtttttga 33625994  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     |||||| |||||||||| |||||||  |||||||    
T  33625993 attaaaattaacggaaatgaccaaaatgtgtaaca 33625959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 45911736 - 45911865
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||     || |||| |||||||| | |||||||||||||| |||   |||||||||| |    
T  45911736 cttctcctctttttcatcttcatatcatctccatcaaccttca-----aagaatcccagaaaaatttcagaagaaaatgaagaaaatctaacgtttttaa 45911830  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||||||||  |||||||  |||||||    
T  45911831 attaaaactaacggaaaagaccaaaatgtgtaaca 45911865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 9010662 - 9010787
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||| ||||||||||| ||||||| | ||||||| |||| |||||| |||| |||||||| ||||  |||||||||| ||| | | | ||||||||    
T  9010662 cttctcctatttttcatctttatatcattttcatcaaccttcaacaacaagaatcccagaaaaattccaatagaaaatgaagaaaaccttatgtttttga 9010761  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||| |||||||||    
T  9010762 attaaaactaacggaagtaaccaaaa 9010787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 4793757 - 4793881
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    |||||||||||||||||||||||| |||||||||||| |||| |||||| ||||  ||||||  |  | ||| |||| || ||| | ||||||||||||     
T  4793757 ttctcctctttttcatcttcatattatctccatcaaccttcaacaacaagaatcctagaaaatttttaaaaggaaattaagaaaacctaacgtttttgaa 4793856  T
Q  102 ttaaaactaacggaaataaccaaaa 126  Q
    ||||||||||||||||| |||||||    
T  4793857 ttaaaactaacggaaatgaccaaaa 4793881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 46535745 - 46535626
Alignment:
Q  7 ctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaa 106  Q
    ||||||||||| ||||||| |||||||||||| |||| |||||| | || || ||||| | ||||| |||||||| ||| | |||||||||||| |||||    
T  46535745 ctctttttcattttcatatgatctccatcaaccttcaacaacaagagtcccataaaaatttcagaaaaaaatgaagaaaacctaacgtttttgaattaaa 46535646  T
Q  107 actaacggaaataaccaaaa 126  Q
    |||||||||||  |||||||    
T  46535645 actaacggaaaggaccaaaa 46535626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 38866624 - 38866502
Alignment:
Q  5 tcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaa-tccagaagaaaatgaataaaccttaacgtttttgagtt 103  Q
    ||||||||||||| ||||||| |||||||||||| |||| |||||| |||| || |||||| | || ||||||||||| ||| | | | |||||||| ||    
T  38866624 tcctctttttcattttcatatgatctccatcaaccttcaacaacaagaatcccataaaaaatttcataagaaaatgaagaaaacctgaggtttttgaatt 38866525  T
Q  104 aaaactaacggaaataaccaaaa 126  Q
    ||||||||||||||| |||||||    
T  38866524 aaaactaacggaaatgaccaaaa 38866502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 43969756 - 43969639
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaa-tccagaagaaaatgaataaaccttaacgtttttg 99  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| ||||  | |||||| |  ||||||||||||| ||| | |||| ||||||    
T  43969756 cttctcctctttttcatcttcatatcatctccatcaaccttcagcaacaagaatccaaaaaaaaattatagaagaaaatgaagaaaacctaacatttttg 43969657  T
Q  100 agttaaaactaacggaaa 117  Q
    | ||||||| || |||||    
T  43969656 aattaaaaccaatggaaa 43969639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 53645608 - 53645716
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||| ||||||||||||||| ||||| |||| ||||||||||| |||||||| | || ||||||||||| ||| | ||| |||||| |    
T  53645608 cttctcctctttttca-cttcatatcatctccgtcaaccttcaacaacaaaaatcccagaaaaatttcaaaagaaaatgaagaaaacctaatgtttttta 53645706  T
Q  101 gttaaaacta 110  Q
     |||||||||    
T  53645707 attaaaacta 53645716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 54191742 - 54191822
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaa 81  Q
    ||||| || ||||||||||||||||||||||||||||| |||| |||||| ||||||||||||| | |||||||| |||||    
T  54191742 cttcttctttttttcatcttcatatcatctccatcaaccttcaacaacaagaatctcagaaaaatttcagaagaacatgaa 54191822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 12381283 - 12381220
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaa 64  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||| || |||||    
T  12381283 cttctcctctttttcatcttcatatcatctccatcaactttcaacaacaagaatcccaaaaaaa 12381220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 15985628 - 15985743
Alignment:
Q  6 cctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaa 105  Q
    |||| |||||||||||||||||||||||||||| |     ||||||||||  ||||||| | |||||||||||||| ||||| |||||||||| | ||||    
T  15985628 cctcattttcatcttcatatcatctccatcaaccta----aacaaaaatccaagaaaaatttcagaagaaaatgaagaaaccctaacgttttttaattaa 15985723  T
Q  106 aactaacggaaataaccaaa 125  Q
    |||||||  |||||| ||||    
T  15985724 aactaacaaaaataatcaaa 15985743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44432853 - 44432798
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatct 56  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||||    
T  44432853 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatct 44432798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 42779673 - 42779734
Alignment:
Q  8 tctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatcca 69  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||  |||||||| ||||    
T  42779673 tctttttcatcttcatatcatctccatcaaccttcaacaacaaaaattccagaaaaattcca 42779734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 21885000 - 21885106
Alignment:
Q  20 tcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaata 119  Q
    ||||||||||||||||||| |||| |||||| |||||| |||||| | || ||||||||||| |||    || |||||||| |||||| |||||||||      
T  21885000 tcatatcatctccatcaaccttcaacaacaagaatctctgaaaaatttcataagaaaatgaagaaaatcaaatgtttttgaattaaaagtaacggaaagg 21885099  T
Q  120 accaaaa 126  Q
    |||||||    
T  21885100 accaaaa 21885106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 28570587 - 28570712
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||| | ||||| || ||||||||||||||||| |||| |||||| ||||||| | ||||| ||||| |||||         ||||| |||||||    
T  28570587 cttctcctcatattcattttaatatcatctccatcaaccttcaacaacaagaatctcaaataaaattcagaaaaaaat---------ttaacttttttga 28570677  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||||||||| |||||||  |||||||    
T  28570678 attaaaactaacggaaatgaccaaaatgtgtaaca 28570712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 44428743 - 44428665
Alignment:
Q  58 agaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
    ||||||| || ||||||||||||| ||| | |||||||||||| ||||||||||||||||  |||||||  ||||||||    
T  44428743 agaaaaattctagaagaaaatgaagaaaacctaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacaa 44428665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 25593304 - 25593373
Alignment:
Q  57 cagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    |||||||| | |||||||||||||| ||| | |||||||||| | ||||||||||||||||| |||||||    
T  25593304 cagaaaaatttcagaagaaaatgaagaaaacctaacgtttttaaattaaaactaacggaaatgaccaaaa 25593373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 8246928 - 8246858
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaacaagag 139  Q
    ||||||| ||||| ||| | |||||||||||| |||||||||||||||| ||||||||  |||||| ||||    
T  8246928 agaagaagatgaaaaaaacctaacgtttttgaattaaaactaacggaaagaaccaaaatgtgtaacgagag 8246858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 4966093 - 4966150
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| ||||| ||| | |||||||||||| ||||||||||||||||| |||||||    
T  4966093 agaagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaa 4966150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 45911740 - 45911683
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| ||||| ||| | |||||||||||| ||||||||||||||||| |||||||    
T  45911740 agaagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaa 45911683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 34958992 - 34958936
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaa 125  Q
    ||||||||||||| ||| | |||| ||||||| ||||||||||||||||| ||||||    
T  34958992 agaagaaaatgaaaaaaacctaacatttttgaattaaaactaacggaaatgaccaaa 34958936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 43317040 - 43316973
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
    ||||||| ||||| ||| | |||||||||||| ||||||||||||||||  |||||||  ||||||||    
T  43317040 agaagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacaa 43316973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 8246942 - 8247020
Alignment:
Q  40 ttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaat 118  Q
    |||| |||||| |||  |||||||| |||| ||||||||||| ||| | |||||||||||| |||||| |||| |||||    
T  8246942 ttcaacaacaagaattccagaaaaattccaaaagaaaatgaagaaaacctaacgtttttgaattaaaaataacagaaat 8247020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 46621152 - 46621218
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||||||||||| ||| | |||||||||| | ||||||||||||||||  |||||||  |||||||    
T  46621152 agaagaaaatgaagaaaacctaacgttttttaattaaaactaacggaaaggaccaaaatgtgtaaca 46621218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 9657892 - 9657929
Alignment:
Q  89 taacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  9657892 taacgtttttgaattaaaactaacggaaagaaccaaaa 9657929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 126
Target Start/End: Complemental strand, 53645592 - 53645555
Alignment:
Q  89 taacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  53645592 taacgtttttgaattaaaactaacggaaatgaccaaaa 53645555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 52268262 - 52268386
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||||||||||||||||||||| ||||||| ||||| |||| |||||| |||| || ||||||||||||| |||||||| ||| ||||||||||||||     
T  52268262 ttctcctctttttcatcttcatagcatctccgtcaaccttcaacaacaagaatcccaaaaaaaatccagaataaaatgaagaaaacttaacgtttttgaa 52268361  T
Q  102 ttaaaactaacggaaataaccaaaa 126  Q
    |||||||||||||||||||||||||    
T  52268362 ttaaaactaacggaaataaccaaaa 52268386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 8846233 - 8846368
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| || ||||||||||||| |||   |||| |||||||    
T  8846233 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattctagaagaaaatgaagaaaatctaacatttttga 8846332  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
     ||||||||||||||||| |||||||  ||||||||    
T  8846333 attaaaactaacggaaatgaccaaaatgtgtaacaa 8846368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 45171225 - 45171349
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||||||||||||| |||||||||||||||| |||| |||||| ||||  ||||||| |||||||||||||||| ||| | ||||||||||||    
T  45171225 cttctcctctttttcatcttc-tatcatctccatcaaccttcaacaacaagaatcctagaaaaactccagaagaaaatgaagaaaacctaacgtttttga 45171323  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||| |||||||    
T  45171324 attaaaactaacggaaatgaccaaaa 45171349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 31514021 - 31514136
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||| | || ||||||||||| ||| | ||||||||||||     
T  31514021 ttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaaaaatcccagaaaaatttcaaaagaaaatgaagaaaacctaacgtttttgaa 31514120  T
Q  102 ttaaaactaacggaaa 117  Q
    ||||| ||||||||||    
T  31514121 ttaaagctaacggaaa 31514136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 40639274 - 40639408
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||| |||||||| |||||||||| |||||| |||| |||||||||||| ||||||| |||||||||||||||| ||| | ||||||||||||    
T  40639274 cttctcctcttcttcatctttatatcatctctatcaaccttcaacaacaaaaatctgagaaaaattccagaagaaaatgaagaaaacctaacgtttttga 40639373  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     |||||||  |||||||| |||||||  |||||||    
T  40639374 attaaaacacacggaaatgaccaaaatatgtaaca 40639408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 41998048 - 41997923
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaa-taaaccttaacgtttttg 99  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||| ||||||||  ||||||||||||||| ||||||| ||||||||||    
T  41998048 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaataccagaagaaaatgaagtaaacct-aacgtttttg 41997950  T
Q  100 agttaaaactaacggaaataaccaaaa 126  Q
    | |||||||||||  |||| |||||||    
T  41997949 aattaaaactaacaaaaatgaccaaaa 41997923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 4846752 - 4846887
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaa-tccagaagaaaatgaataaaccttaacgtttttg 99  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||| || |||||| |  ||||||||||||| ||| | |||||||||||    
T  4846752 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccaaaaaaaattatagaagaaaatgaagaaaacctaacgtttttg 4846851  T
Q  100 agttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    | |||||||||||||||||  ||||||  |||||||    
T  4846852 aattaaaactaacggaaatggccaaaatgtgtaaca 4846887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 40926168 - 40926302
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||  |||||||| ||||||||||||||||   | | |||||||||| |    
T  40926168 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaattccagaaaaattccagaagaaaatgaaaggaacctaacgtttttca 40926267  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     |||||| |||||||||| |||||||  |||||||    
T  40926268 attaaaattaacggaaatgaccaaaatgtgtaaca 40926302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 2829565 - 2829690
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| | |  |||||||| ||||  |||||||||| ||| | ||||||||||||    
T  2829565 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagagttccagaaaaattccatgagaaaatgaagaaaacctaacgtttttga 2829664  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||| |||||| |||||||    
T  2829665 attaaaactaatggaaatgaccaaaa 2829690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 9028420 - 9028295
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||| ||||||||||||||||| |||| |||||  ||||  ||||||| |||||||||||||||| ||| | ||||||||||||    
T  9028420 cttctcctctttttcatctttatatcatctccatcaaccttcaacaacatgaatccgagaaaaattccagaagaaaatgaagaaaacctaacgtttttga 9028321  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||||| |||  |||||||    
T  9028320 attaaaactaacgaaaaataccaaaa 9028295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 27254213 - 27254088
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||| ||||||||||||||||||||||| ||||||  |||| ||| || |||| |||||||| |||||||||||||||| ||| | |||| |||||||    
T  27254213 cttctcgtctttttcatcttcatatcatcttcatcaatcttcaacaataagaatcccagaaaaattccagaagaaaatgaagaaaacctaacatttttga 27254114  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||||| |||||    
T  27254113 attaaaactaacggaaataatcaaaa 27254088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 35753660 - 35753536
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| |||| || || ||||| ||| | ||||||||||||    
T  35753660 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccaaaaaaatatgaagaaaac-taacgtttttga 35753562  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||||| |||| |||||||    
T  35753561 attaaaactaacgaaaatgaccaaaa 35753536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 53678662 - 53678545
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||| ||||| |||||||||||||||||||||||||| |||| |||||||||||  ||||||| | |||||||||||||| ||| | |||| |||||||    
T  53678662 cttcttctcttcttcatcttcatatcatctccatcaaccttcaacaacaaaaatccgagaaaaatttcagaagaaaatgaagaaaacctaacatttttga 53678563  T
Q  101 gttaaaactaacggaaat 118  Q
     |||||||||||||||||    
T  53678562 attaaaactaacggaaat 53678545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 51311813 - 51311694
Alignment:
Q  7 ctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaa 106  Q
    ||||| |||||||||||||||||||||||||| || | |||||| |||| |||||||| | |||||||||||||| ||||  |||||||||||| |||||    
T  51311813 ctcttcttcatcttcatatcatctccatcaacctttaacaacaacaatcccagaaaaatttcagaagaaaatgaagaaactctaacgtttttgaattaaa 51311714  T
Q  107 actaacggaaataaccaaaa 126  Q
    |||||||||||  |||||||    
T  51311713 actaacggaaaagaccaaaa 51311694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22444415 - 22444299
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||| ||||||||||||||||||||||||||||| |  | |||||| |||| || ||||| ||||||| |||||||| ||| | ||||||||||||    
T  22444415 cttctcctatttttcatcttcatatcatctccatcaacatataacaacaagaatcccataaaaattccagaaaaaaatgaagaaaacctaacgtttttga 22444316  T
Q  101 gttaaaactaacggaaa 117  Q
     ||||||||||||||||    
T  22444315 attaaaactaacggaaa 22444299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 51885521 - 51885637
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||| |||| |||||||||||||||||||||||||| |||| |||||||||||  ||||| | |||| ||||||||||| ||| | ||||||||||||    
T  51885521 cttctcttcttcttcatcttcatatcatctccatcaaccttcaacaacaaaaatccaagaaatattccataagaaaatgaagaaaacctaacgtttttga 51885620  T
Q  101 gttaaaactaacggaaa 117  Q
     |||||||| |||||||    
T  51885621 attaaaactgacggaaa 51885637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 47891742 - 47891631
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||| |||||||||||||||||||||||||| |||| ||||||||||   ||||||  |||| ||||||||||| ||| | ||||||||||||    
T  47891742 cttctcctcttcttcatcttcatatcatctccatcaaccttcaacaacaaaaattcgagaaaatttccataagaaaatgaagaaaacctaacgtttttga 47891643  T
Q  101 gttaaaactaac 112  Q
     |||||||||||    
T  47891642 attaaaactaac 47891631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 14353277 - 14353158
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccag---aagaaaatgaataaaccttaacgtttt 97  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||| ||||| |||||   || |||||||| ||||| |||| ||||    
T  14353277 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaataatctcataaaaattccaggaaaaaaaaatgaagaaacc-taacatttt 14353179  T
Q  98 tgagttaaaactaacggaaat 118  Q
    ||| |||||||| ||||||||    
T  14353178 tgaattaaaactgacggaaat 14353158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 40969412 - 40969549
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||| |||||||||||||||||||||||||| |||| ||||||||||   ||||||| ||||| | |||||||| ||| | ||||||||||||    
T  40969412 cttctcctcttcttcatcttcatatcatctccatcaaccttcaacaacaaaaattcaagaaaaattccag-ataaaatgaagaaaacctaacgtttttga 40969510  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaacaagag 139  Q
     |||||||| |||||||  |||||||  ||||| |||||    
T  40969511 attaaaactgacggaaaggaccaaaatgtgtaagaagag 40969549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 43527142 - 43527280
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||| |||||||| ||||| ||||||||||||||||| |||| |||||| |||| |||||||| |||| || |||||||| ||| | ||| ||| ||||    
T  43527142 cttcttctcttttttatctttatatcatctccatcaaccttcaacaacaagaatcacagaaaaattccaaaaaaaaatgaagaaaacataatgttcttga 43527241  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaacaagag 139  Q
     ||||||||||||||||  |||||||  |||||||||||    
T  43527242 attaaaactaacggaaaggaccaaaatgtgtaacaagag 43527280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7937792 - 7937711
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaat 82  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||| || ||||| |||||||||||||||||    
T  7937792 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccataaaaattccagaagaaaatgaat 7937711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 15862404 - 15862276
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||||||||||||||||||||||||||||||       ||||| ||||||| ||||| |||||||||||||||| ||| | ||| ||||||||    
T  15862404 cttctcctctttttcatcttcatatcatctccatcaac-------aacaagaatctcaaaaaaattccagaagaaaatgaagaaaacctaatgtttttga 15862312  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
     ||||||||||  ||||| |||||||  ||||||||    
T  15862311 attaaaactaatagaaatgaccaaaatgtgtaacaa 15862276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 28688219 - 28688094
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||| | ||| ||| |||| |||||| |||| |||||||| | || ||||||||||| ||  | ||||||||||||    
T  28688219 cttctcctctttttcatcttcatatcattttcattaacattcaacaacaagaatcccagaaaaatttcaaaagaaaatgaagaatacctaacgtttttga 28688120  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||| |||||| |||||||    
T  28688119 attaaaactaatggaaatgaccaaaa 28688094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 44069348 - 44069227
Alignment:
Q  5 tcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagtta 104  Q
    ||||||||||||| ||||||| |||||||||||| |||| |||||| |||| || ||||| | |||||||||||||| ||| | ||| |||||||| |||    
T  44069348 tcctctttttcattttcatatgatctccatcaaccttcaacaacaagaatcccataaaaatttcagaagaaaatgaagaaaacctaatgtttttgaatta 44069249  T
Q  105 aaactaacggaaataaccaaaa 126  Q
    |||||||||||||  |||||||    
T  44069248 aaactaacggaaaggaccaaaa 44069227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 53841247 - 53841140
Alignment:
Q  10 tttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaact 109  Q
    ||||| ||||||||||||||||||||||| |||| ||| || |||| |||||||| ||||||| |||||||| ||| | |||||||||||| |||||| |    
T  53841247 ttttttatcttcatatcatctccatcaaccttcaacaataagaatcccagaaaaattccagaataaaatgaagaaaacctaacgtttttgaattaaaatt 53841148  T
Q  110 aacggaaa 117  Q
    ||||||||    
T  53841147 aacggaaa 53841140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 5348732 - 5348850
Alignment:
Q  8 tctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaa 107  Q
    |||| |||||||||||||||||||||||||| |||| |||| |||||||  |||||| |||||||||| ||||| ||| | |||||||||||| ||||||    
T  5348732 tcttcttcatcttcatatcatctccatcaaccttcaacaactaaaatctgcgaaaaattccagaagaatatgaagaaaacctaacgtttttgaattaaaa 5348831  T
Q  108 ctaacggaaataaccaaaa 126  Q
    |  |||||||  |||||||    
T  5348832 cacacggaaaggaccaaaa 5348850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 26332547 - 26332414
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||| ||||||||||||||||||||||||||||||| |||| |||||| |||  ||| |||| | || ||||||||||| ||| | ||| ||||||||    
T  26332547 cttctcatctttttcatcttcatatcatctccatcaaccttcaacaacaagaataccag-aaaatttcaaaagaaaatgaagaaaacctaatgtttttga 26332449  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||||||||  |||||||  |||||||    
T  26332448 attaaaactaacggaaaggaccaaaatgtgtaaca 26332414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 7274871 - 7274755
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||||||||||| ||||||||||||||||||||||| |||| |||||| |||| |||||||| ||||||||||  |||| |||   ||| ||||||||     
T  7274871 ttctcctcttttttatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccagaagaacgtgaagaaaatctaatgtttttgaa 7274772  T
Q  102 ttaaaactaacggaaat 118  Q
    ||||| |||| ||||||    
T  7274771 ttaaagctaatggaaat 7274755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 27 - 135
Target Start/End: Complemental strand, 7950478 - 7950370
Alignment:
Q  27 atctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||||| || |||| |||||| ||| ||||||||| | |||||||||||||| ||| | |||||||||||| |||||||||||||||| ||||||||    
T  7950478 atctccatccaccttcaacaacaagaatttcagaaaaatttcagaagaaaatgaagaaaacctaacgtttttgaattaaaactaacggaaagaaccaaaa 7950379  T
Q  127 gttgtaaca 135  Q
      |||||||    
T  7950378 tgtgtaaca 7950370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 34630178 - 34630086
Alignment:
Q  34 tcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||| |||| |||||| |||| |||||||| |||||||||||||||| ||| |||||||||||||| ||||||||||||||||  |||||||    
T  34630178 tcaaccttcaacaacaagaatcccagaaaaattccagaagaaaatgaagaaaacttaacgtttttgaattaaaactaacggaaaggaccaaaa 34630086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 49222256 - 49222148
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||| ||||||||||||||||||||||||||||  ||| ||||||||||| |||||||| | || ||| ||||||| ||| | ||| ||||||||    
T  49222256 cttctcctcattttcatcttcatatcatctccatcaaccatcaacaacaaaaatcccagaaaaatttcaaaaggaaatgaagaaaacctaatgtttttga 49222157  T
Q  101 gttaaaact 109  Q
     ||||||||    
T  49222156 attaaaact 49222148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 28691342 - 28691232
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||| ||||  ||||||| | | |||||||||||| |||   |||||||||| |     
T  28691342 ttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcctagaaaaatttcggaagaaaatgaaaaaaatctaacgtttttaaa 28691243  T
Q  102 ttaaaactaac 112  Q
    |||||| ||||    
T  28691242 ttaaaattaac 28691232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 41208558 - 41208691
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||| |||| |||||||| | | |||||||||| | |||   ||| ||||||||    
T  41208558 cttctcctctttttcatcttcatatcatctccatcacccttcaacaacaagaatcgcagaaaaatttctgaagaaaatg-agaaaatataatgtttttga 41208656  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     |||||| |||||||||  |||||||  |||||||    
T  41208657 attaaaattaacggaaaggaccaaaatgtgtaaca 41208691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 54081512 - 54081378
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| || | |||||| | |   ||||||| | |||||||||||||| |||   |||||||||| |    
T  54081512 cttctcctctttttcatcttcatatcatctccatcaaccttgaacaacaagagttctagaaaaatttcagaagaaaatgaagaaaatctaacgtttttaa 54081413  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||| ||||  |||||||  |||||||    
T  54081412 attaaaactaacagaaaagaccaaaatatgtaaca 54081378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 34521423 - 34521499
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaa 77  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| ||||  | ||||| ||||||||||||    
T  34521423 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatccaaaaaaaattccagaagaaaa 34521499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 54247419 - 54247499
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaa 81  Q
    |||||||||||||||||||||||||||||| ||||||| |||| |||||| |||| | |||||| | ||||||||||||||    
T  54247419 cttctcctctttttcatcttcatatcatcttcatcaaccttcaacaacaagaatccctgaaaaatttcagaagaaaatgaa 54247499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 19124345 - 19124463
Alignment:
Q  8 tctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaa 107  Q
    ||||||||||||||||||||||||||||||||||||  | ||  |||| |||||||| | |||||||||||          |||||||||||| ||||||    
T  19124345 tctttttcatcttcatatcatctccatcaactttcaatagcaggaatcccagaaaaatttcagaagaaaat---------ctaacgtttttgaattaaaa 19124435  T
Q  108 ctaacggaaataaccaaaagttgtaaca 135  Q
    |||||||||||||||||||  |||||||    
T  19124436 ctaacggaaataaccaaaatgtgtaaca 19124463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 4 - 126
Target Start/End: Complemental strand, 17274002 - 17273881
Alignment:
Q  4 ctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagtt 103  Q
    |||||||| ||||||||||||||||||| |||||| |||| |||||| |||| |||| ||| | || ||||||||||| ||| | |||||||||| | ||    
T  17274002 ctcctcttcttcatcttcatatcatctctatcaaccttcaacaacaagaatc-cagacaaatttcaaaagaaaatgaagaaaacctaacgttttttaatt 17273904  T
Q  104 aaaactaacggaaataaccaaaa 126  Q
    |||||||||| |||  |||||||    
T  17273903 aaaactaacgaaaaagaccaaaa 17273881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 50819375 - 50819485
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||| ||||||||||||| ||||||||||||||||| || | |||||| | ||  ||||||| | |||||||||||||| |||   ||||||||||||     
T  50819375 ttctcatctttttcatctttatatcatctccatcaacctttaacaacaagagtcctagaaaaatttcagaagaaaatgaagaaaatctaacgtttttgaa 50819474  T
Q  102 ttaaaactaac 112  Q
    |||||||||||    
T  50819475 ttaaaactaac 50819485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 50856489 - 50856379
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||| ||||||||||||| ||||||||||||||||| || | |||||| | ||  ||||||| | |||||||||||||| |||   ||||||||||||     
T  50856489 ttctcatctttttcatctttatatcatctccatcaacctttaacaacaagagtcctagaaaaatttcagaagaaaatgaagaaaatctaacgtttttgaa 50856390  T
Q  102 ttaaaactaac 112  Q
    |||||||||||    
T  50856389 ttaaaactaac 50856379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 21169825 - 21169956
Alignment:
Q  3 tctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagt 102  Q
    |||||| |||||||| |||||||||||| ||||||| |||| |||||| | || |||||||| | ||||| ||||| || |||   |||| ||||||| |    
T  21169825 tctcctatttttcatattcatatcatcttcatcaaccttcaacaacaagattcccagaaaaatttcagaa-aaaatcaaaaaaatctaacttttttgaat 21169923  T
Q  103 taaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||||||||||||| ||||||||  |||||||    
T  21169924 taaaactaacggaaagaaccaaaatgtgtaaca 21169956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 12123247 - 12123361
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||||||||||||||||||||| || ||||| |||| |||||| ||||           ||||||||||||||| ||| | ||||| ||||||    
T  12123247 cttctcctctttttcatcttcatatcatccccgtcaaccttcaacaacaagaatc-----------ccagaagaaaatgaagaaaacctaacgcttttga 12123335  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||| |||||||    
T  12123336 attaaaactaacggaaatgaccaaaa 12123361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 17102541 - 17102659
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||| ||||||||||||||||||||||||||||||||       |||||| |||  |||||||  ||||| |||||||||| |||   ||||||||||||    
T  17102541 cttcacctctttttcatcttcatatcatctccatcaa-------caacaagaattccagaaaagttccagtagaaaatgaaaaaaaactaacgtttttga 17102633  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||  |||||||    
T  17102634 attaaaactaacggaaaggaccaaaa 17102659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 126
Target Start/End: Complemental strand, 52606345 - 52606232
Alignment:
Q  3 tctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagt 102  Q
    ||||||||||||||| ||||||||||||| |||||| |||| |||||| |||| |||||||| ||||||||||||         | |||||||||| | |    
T  52606345 tctcctctttttcatattcatatcatctc-atcaaccttcaacaacaagaatcccagaaaaattccagaagaaaa---------cctaacgttttttatt 52606256  T
Q  103 taaaactaacggaaataaccaaaa 126  Q
    |||||||||||||||| |||||||    
T  52606255 taaaactaacggaaatgaccaaaa 52606232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 136
Target Start/End: Complemental strand, 40410876 - 40410806
Alignment:
Q  66 tccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
    |||||||||||||||| ||| | |||||||||| | |||||||||||||||||||||||||  ||||||||    
T  40410876 tccagaagaaaatgaagaaaacctaacgttttttaattaaaactaacggaaataaccaaaatgtgtaacaa 40410806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 54107888 - 54107773
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||| ||||          |||| |||||| |||| |||||||| | |||||||||||||| ||| | ||| ||||||||    
T  54107888 cttctcctctttttcatcttcataccatc----------ttcatcaacaagaatcccagaaaaatttcagaagaaaatgaagaaaacctaatgtttttga 54107799  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||| |||||||    
T  54107798 attaaaactaacggaaatgaccaaaa 54107773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 10756936 - 10756831
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||||||||||||||||||||||||||          |||||| ||||  ||||||| ||||||| |||||||| ||| | ||||||||||||    
T  10756936 cttctcctctttttcatcttcatatcatctccat----------caacaagaatcctagaaaaattccagaa-aaaatgaagaaaacctaacgtttttga 10756848  T
Q  101 gttaaaactaacggaaa 117  Q
     ||||||||||||||||    
T  10756847 attaaaactaacggaaa 10756831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 29248474 - 29248550
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaa 77  Q
    ||||||||||||||||||||| ||||||||||| |||| |||| |||||| |||  |||||||| ||| ||||||||    
T  29248474 cttctcctctttttcatcttcgtatcatctccaccaaccttcaacaacaagaattccagaaaaattcctgaagaaaa 29248550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 46766841 - 46766727
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||| |||||| |||||||||||||||| ||||||||| |||| ||||||||||           | |||||||||||||| ||| | |||||||||| |    
T  46766841 cttcccctcttcttcatcttcatatcatttccatcaaccttcaacaacaaaaat-----------ttcagaagaaaatgaagaaaacctaacgtttttta 46766753  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||| |||||||    
T  46766752 attaaaactaacggaaatgaccaaaa 46766727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2078701 - 2078648
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaat 54  Q
    ||||||||||| ||||||||||||| ||||| ||||||||||| ||||||||||    
T  2078701 cttctcctcttcttcatcttcatattatctctatcaactttcaacaacaaaaat 2078648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 37133458 - 37133381
Alignment:
Q  49 aaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    |||||||| ||||||| |||||||||||||||| ||| | |||||||||||| |||||||| ||| |||  |||||||    
T  37133458 aaaaatctaagaaaaattccagaagaaaatgaagaaaacctaacgtttttgaattaaaacttacgaaaaggaccaaaa 37133381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 7742994 - 7742919
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaa 77  Q
    |||||||||||||||||||||||||||||||||||| | |||| ||| || |||| || ||||||| | ||||||||    
T  7742994 cttctcctctttttcatcttcatatcatctccatcatccttcaacaataagaatccca-aaaaaattctgaagaaaa 7742919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 21918655 - 21918731
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaat 78  Q
    |||||| ||| ||||||||||||||||||| |||||| |||| |||||||||||  | ||||| ||||||| |||||    
T  21918655 ttctccccttcttcatcttcatatcatctctatcaaccttcaacaacaaaaatccgaaaaaaattccagaaaaaaat 21918731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 135
Target Start/End: Complemental strand, 50819378 - 50819315
Alignment:
Q  72 agaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    |||||||||| ||| |||||| ||||||| ||||||||||||||||| |||||||  |||||||    
T  50819378 agaaaatgaagaaaacttaacatttttgaattaaaactaacggaaatgaccaaaatgtgtaaca 50819315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 135
Target Start/End: Original strand, 50856486 - 50856549
Alignment:
Q  72 agaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    |||||||||| ||| |||||| ||||||| ||||||||||||||||| |||||||  |||||||    
T  50856486 agaaaatgaagaaaacttaacatttttgaattaaaactaacggaaatgaccaaaatgtgtaaca 50856549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 45871914 - 45871809
Alignment:
Q  6 cctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaa 105  Q
    ||||||||||||||||||||||||||||| |||       ||||| |||   ||||||| |||| ||||||||||| ||| | ||||| |||| | ||||    
T  45871914 cctctttttcatcttcatatcatctccattaac-------aacaagaattctagaaaaattccaaaagaaaatgaagaaaacctaacgatttttaattaa 45871822  T
Q  106 aactaacggaaat 118  Q
    |||||||||||||    
T  45871821 aactaacggaaat 45871809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 126
Target Start/End: Original strand, 53841242 - 53841308
Alignment:
Q  60 aaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    |||||||  ||||||| ||||| ||| | |||||||||||| ||||||||||||||||| |||||||    
T  53841242 aaaaaatggagaagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaa 53841308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 588379 - 588326
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaat 54  Q
    |||||| |||| |||||||| ||||||||||||||||| |||| ||||||||||    
T  588379 cttctcatcttcttcatctttatatcatctccatcaacattcaacaacaaaaat 588326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 41208562 - 41208505
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||||||||| ||| | |||||||||||| ||||| ||||||||||| |||||||    
T  41208562 agaagaaaatgaagaaaacctaacgtttttgaattaaatctaacggaaatgaccaaaa 41208505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 45171229 - 45171172
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| ||||| ||| | |||||||||||| ||||||||||||||||| |||||||    
T  45171229 agaagaagatgaagaaaacataacgtttttgaattaaaactaacggaaatgaccaaaa 45171172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 8846237 - 8846170
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
    ||||||| ||||| ||| | |||||||||||| |||||| |||||||||| |||||||  ||||||||    
T  8846237 agaagaagatgaagaaaacctaacgtttttgaattaaaattaacggaaatgaccaaaatgtgtaacaa 8846170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 15862400 - 15862467
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
    ||||||| ||||| ||| | |||||||||||| ||||||||||||||||  |||||||  ||||||||    
T  15862400 agaagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacaa 15862467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 40969416 - 40969346
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaacaagag 139  Q
    ||||||| ||||| ||| | |||||||||||| |||||||| |||||||| |||||||  ||||| |||||    
T  40969416 agaagaagatgaagaaaacctaacgtttttgaattaaaactgacggaaatgaccaaaatgtgtaagaagag 40969346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 7937788 - 7937845
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| ||||| ||| |||||||||||||| |||||||||||| |||  |||||||    
T  7937788 agaagaagatgaagaaaacttaacgtttttgaattaaaactaacgaaaaggaccaaaa 7937845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 9028416 - 9028473
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| ||||| ||| | |||||||||||| |||||||||||||||| ||| ||||    
T  9028416 agaagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaaaaactaaaa 9028473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 12123251 - 12123194
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| ||||| ||| | |||| ||||||| |||||||||||||||| ||||||||    
T  12123251 agaagaagatgaagaaaacctaacatttttgaattaaaactaacggaaagaaccaaaa 12123194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 40926172 - 40926115
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    |||||||| |||| ||| | |||||||||| | ||||||||||||||||| |||||||    
T  40926172 agaagaaagtgaagaaaacctaacgtttttcaattaaaactaacggaaatgaccaaaa 40926115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 47891738 - 47891795
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| ||||| ||| | |||||||||||| ||||||||||||||||  |||||||    
T  47891738 agaagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaaggaccaaaa 47891795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 93 - 126
Target Start/End: Original strand, 54108369 - 54108402
Alignment:
Q  93 gtttttgagttaaaactaacggaaataaccaaaa 126  Q
    |||||||| |||||||||||||||||||||||||    
T  54108369 gtttttgaattaaaactaacggaaataaccaaaa 54108402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 14353273 - 14353329
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaa 125  Q
    ||||||| ||||| ||| | |||| ||||||| ||||||||||||||||| ||||||    
T  14353273 agaagaagatgaagaaaacctaacatttttgaattaaaactaacggaaatgaccaaa 14353329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 33773013 - 33772977
Alignment:
Q  7 ctctttttcatcttcatatcatctccatcaactttca 43  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  33773013 ctcttcttcatcttcatatcatctccatcaaccttca 33772977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 40639258 - 40639214
Alignment:
Q  89 taacgtttttgagttaaaactaacggaaataaccaaaagttgtaa 133  Q
    |||||||||||| ||||||| ||||||||| ||||||| ||||||    
T  40639258 taacgtttttgaattaaaaccaacggaaatgaccaaaatttgtaa 40639214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 114
Target Start/End: Original strand, 53309931 - 53309998
Alignment:
Q  46 aacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacgg 114  Q
    ||||| |||| || ||||| |||||||||||||||| |||  ||||||||||||| |||||| ||||||    
T  53309931 aacaagaatcccataaaaattccagaagaaaatgaagaaa-attaacgtttttgaattaaaattaacgg 53309998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 35263651 - 35263786
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||| || ||||||||||| | ||| | ||||||||||||    
T  35263651 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatctcagaaaaattctagaagaaaatggagaaaacctaacgtttttga 35263750  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
     ||||||||||||||||  |||||||  ||||||||    
T  35263751 attaaaactaacggaaaggaccaaaatgtgtaacaa 35263786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 10656323 - 10656198
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||||||||||||||||||||||||| |||| |||| |||||| |||| |||||||| |||| ||||||||||| ||| | ||||||||||||    
T  10656323 cttctcctctttttcatcttcatatcatctccaccaaccttcaacaacaagaatcccagaaaaattccataagaaaatgaagaaaacctaacgtttttga 10656224  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||| ||||| |||||||    
T  10656223 attaaaactaaccgaaatgaccaaaa 10656198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 25923275 - 25923401
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaat-ccagaagaaaatgaataaaccttaacgtttttg 99  Q
    ||||||||||||| |||||||||||||||||||||||| || | |||||| |||| ||||||| || ||| ||||||||||| ||| |||||||||||||    
T  25923275 cttctcctcttttccatcttcatatcatctccatcaacctttaacaacaagaatcccagaaaatattccaaaagaaaatgaagaaaacttaacgtttttg 25923374  T
Q  100 agttaaaactaacggaaataaccaaaa 126  Q
    | ||||||||||||||||| |||||||    
T  25923375 aattaaaactaacggaaatgaccaaaa 25923401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 29024162 - 29024029
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||||||||||||||||||||||||||||||| ||| |||| |||||| |||  |||||||| |||||||||||||||| ||| | |||| |||||||     
T  29024162 ttctcctctttttcatcttcatatcatctccattaaccttcaacaacaagaattccagaaaaattccagaagaaaatgaagaaaacctaacatttttgaa 29024063  T
Q  102 ttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    |||||| |||||||||| |||||||  |||||||    
T  29024062 ttaaaattaacggaaatgaccaaaatatgtaaca 29024029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 40774566 - 40774441
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||| ||||||||||||||||||||||||||||| |||| ||||||||||| |||||||| |  ||||||||||||| |||   ||| ||||||||    
T  40774566 cttctcctatttttcatcttcatatcatctccatcaaccttcaacaacaaaaatcccagaaaaattttagaagaaaatgaagaaaatctaatgtttttga 40774467  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||| |||||||    
T  40774466 attaaaactaacggaaatgaccaaaa 40774441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 28391927 - 28392051
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    |||| ||||||||||| |||||||||||||||||||| ||||  |||||| ||| |||||||| ||||||| |||||| | ||||| ||||||||||||     
T  28391927 ttcttctctttttcatattcatatcatctccatcaaccttcaataacaaagatcacagaaaaattccagaaaaaaatggagaaaccctaacgtttttgaa 28392026  T
Q  102 ttaaaactaacggaaataaccaaaa 126  Q
    ||||||||||||||||| |||||||    
T  28392027 ttaaaactaacggaaatgaccaaaa 28392051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 42710507 - 42710642
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||| ||||| ||||  ||||| |||| || ||||| |||||||||||||| | |||   ||||||||||||    
T  42710507 cttctcctctttttcatcttcatatcatctccttcaaccttcaataacaagaatcccataaaaattccagaagaaaatgtagaaaatctaacgtttttga 42710606  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
     ||||||||||||||||| ||||||| || ||||||    
T  42710607 attaaaactaacggaaatgaccaaaatttataacaa 42710642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 12593613 - 12593747
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||   ||||||| || ||||||||||||| ||| | |||||||||| |    
T  12593613 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaataattctagaaaaattcgagaagaaaatgaagaaaacctaacgtttttaa 12593712  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||||||||  |||||||  |||||||    
T  12593713 attaaaactaacggaaaggaccaaaatgtgtaaca 12593747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 5088032 - 5087911
Alignment:
Q  5 tcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagtta 104  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||| |||| || ||||| | |||||||||||||| ||| | |||||||||||| |||    
T  5088032 tcctctttttcattttcatatgatctccatcaactttcaacaacaagaatcccataaaaatttcagaagaaaatgaagaaaacctaacgtttttgaatta 5087933  T
Q  105 aaactaacggaaataaccaaaa 126  Q
    |||||||||||||  |||||||    
T  5087932 aaactaacggaaaggaccaaaa 5087911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 19205100 - 19205225
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||| ||||||||||||||||||||||| |||| |||||| |||| |||||||| |||| |||| |||||| ||| | ||| ||||||||    
T  19205100 cttctcctctttttgatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccaaaagagaatgaagaaaacctaaagtttttga 19205199  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||  |||||||    
T  19205200 attaaaactaacggaaaggaccaaaa 19205225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 39706280 - 39706155
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||||||||||||||||||||||| |||||| |||| |||||| |||| || ||||||  ||||||||||| || ||| | ||||||||||||    
T  39706280 cttctcctctttttcatcttcatatcatctctatcaaccttcaacaacaagaatcccaaaaaaaaatcagaagaaaataaagaaaacctaacgtttttga 39706181  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||  |||||||    
T  39706180 attaaaactaacggaaaagaccaaaa 39706155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 41859906 - 41859781
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||  ||||  ||||||| | || ||||||||||| |||   ||||||||||||    
T  41859906 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacatgaatcatagaaaaatttcataagaaaatgaagaaaatctaacgtttttga 41859807  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||||||||| ||||||||    
T  41859806 attaaaactaacggaaagaaccaaaa 41859781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 43569927 - 43570038
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaa-tccagaagaaaatgaataaaccttaacgtttttg 99  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||| || |||||| | || ||||||||||| ||| |||||||||||||    
T  43569927 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaaaaatcacataaaaaatttcaaaagaaaatgaagaaaacttaacgtttttg 43570026  T
Q  100 agttaaaactaa 111  Q
    | | ||||||||    
T  43570027 aatcaaaactaa 43570038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 12694843 - 12694968
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||| ||||||||||| ||||| | |||| |||||| |||| || ||||| |||| || |||||||| ||| | ||||||||||||    
T  12694843 cttctcctctttttcatcctcatatcatcttcatcagccttcaacaacaagaatcccaaaaaaattccaaaataaaatgaagaaaacctaacgtttttga 12694942  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||| |||||||||||||    
T  12694943 attaaaactaacagaaataaccaaaa 12694968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 17861199 - 17861320
Alignment:
Q  5 tcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagtta 104  Q
    |||||||||||||||||||||||||||||||||| |||| || ||| |||  |||||||| |||||||||||||||| ||| | |||||||||||| |||    
T  17861199 tcctctttttcatcttcatatcatctccatcaaccttcaacagcaagaataccagaaaaattccagaagaaaatgaagaaaacctaacgtttttgaatta 17861298  T
Q  105 aaactaacggaaataaccaaaa 126  Q
    |||| |||| |||  |||||||    
T  17861299 aaaccaacgaaaaggaccaaaa 17861320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 31656587 - 31656462
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||| || |||| || ||||| ||| ||| |||||||| ||| | ||| ||||||||    
T  31656587 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaataagaatcccataaaaattccggaaaaaaatgaagaaaacctaatgtttttga 31656488  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||| |||||| |||||||    
T  31656487 attaaaactaatggaaatgaccaaaa 31656462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 36752131 - 36752006
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||| ||||| |||||||||| |||||||||||| |||| |||||| ||| ||||||||  |  ||||||||||||| ||| | ||||||||||||    
T  36752131 cttctccttttttttatcttcatattatctccatcaaccttcaacaacaagaatttcagaaaatttttagaagaaaatgaagaaaacctaacgtttttga 36752032  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||||||||| ||||||||    
T  36752031 attaaaactaacggaaagaaccaaaa 36752006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 334453 - 334549
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttt 97  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| |||| ||||||||||| ||| | |||||||||    
T  334453 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccataagaaaatgaagaaaacctaacgtttt 334549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 7399307 - 7399181
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaa-tccagaagaaaatgaataaaccttaacgtttttg 99  Q
    |||||| ||||||||||||||||||||||||||||||| |||| |||||| |||| || |||||| |||| ||||||||||| ||| | |||||||||||    
T  7399307 cttctcttctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccataaaaaattccataagaaaatgaagaaaacctaacgtttttg 7399208  T
Q  100 agttaaaactaacggaaataaccaaaa 126  Q
    | |||||| ||||| |||  |||||||    
T  7399207 aattaaaaataacgaaaaggaccaaaa 7399181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 16353376 - 16353266
Alignment:
Q  8 tctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaa 107  Q
    ||||||||||||||||||||||||||||||||||||  | ||| |||  |||||||| |  ||||||||||||| ||| | |||||||||||| ||||||    
T  16353376 tctttttcatcttcatatcatctccatcaactttcaatagcaagaattccagaaaaattttagaagaaaatgaagaaaacctaacgtttttgaattaaaa 16353277  T
Q  108 ctaacggaaat 118  Q
    |||||||||||    
T  16353276 ctaacggaaat 16353266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 5152773 - 5152907
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||| |||| |||||||||||||||| |||||| || |||| |||||||| ||  ||||||| || ||||||||||||| ||| | ||||||||||||    
T  5152773 cttctcttcttcttcatcttcatatcatatccatcgaccttcaacaacaaaagtccaagaaaaa-tctagaagaaaatgaagaaaacctaacgtttttga 5152871  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
     ||||||| ||||||||| |||||||  ||||||||    
T  5152872 attaaaaccaacggaaatgaccaaaatgtgtaacaa 5152907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 41372333 - 41372440
Alignment:
Q  19 ttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaat 118  Q
    ||||||||||||| |||||| |||| |||||||||||  ||||||| |||| ||||||||||| ||| | |||||||||||| |||||||||||| ||||    
T  41372333 ttcatatcatctctatcaaccttcaacaacaaaaatccgagaaaaattccaaaagaaaatgaagaaaacctaacgtttttgaattaaaactaacgaaaat 41372432  T
Q  119 aaccaaaa 126  Q
     |||||||    
T  41372433 gaccaaaa 41372440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 9693079 - 9693209
Alignment:
Q  5 tcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagtta 104  Q
    ||||||||||||||||||||||||||| | |||| || | |||||| |||| ||| |||| |||||||||||| ||| ||| |  ||| ||||||| |||    
T  9693079 tcctctttttcatcttcatatcatctctaccaacctttaacaacaagaatcccaggaaaattccagaagaaaacgaaaaaaaccaaacatttttgaatta 9693178  T
Q  105 aaactaacggaaataaccaaaagttgtaaca 135  Q
    |||||||||||||| |||||||  |||||||    
T  9693179 aaactaacggaaatgaccaaaatgtgtaaca 9693209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 3878638 - 3878763
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||| ||||||| |||||||||||||||||||||||||||| |||||| |||  ||| |||| ||||||||||||| || ||| | ||| |||||| |    
T  3878638 cttctcttcttttttatcttcatatcatctccatcaactttcaacaacaagaattccaggaaaattccagaagaaaataaagaaaacctaaggtttttta 3878737  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||| |||| ||||| |||||||    
T  3878738 attaaaattaacagaaatgaccaaaa 3878763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 40589211 - 40589327
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||| ||||||||||||||||| |||| |||||| |||| || ||||| | || ||||||||||| |||   |||| |||||||    
T  40589211 cttctcctctttttcatctttatatcatctccatcaaccttcaacaacaagaatcccataaaaatttcaaaagaaaatgaagaaaatctaacatttttga 40589310  T
Q  101 gttaaaactaacggaaa 117  Q
     |||||||||| |||||    
T  40589311 attaaaactaatggaaa 40589327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 40589814 - 40589930
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||| ||||||||||||||||| |||| |||||| |||| || ||||| | || ||||||||||| |||   |||| |||||||    
T  40589814 cttctcctctttttcatctttatatcatctccatcaaccttcaacaacaagaatcccataaaaatttcaaaagaaaatgaagaaaatctaacatttttga 40589913  T
Q  101 gttaaaactaacggaaa 117  Q
     |||||||||| |||||    
T  40589914 attaaaactaatggaaa 40589930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 15267397 - 15267508
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatg-aataaaccttaacgtttttga 100  Q
    ||||| |||||||||||||||||||||||| |||||| |||| ||| || |||| || ||||| |||||||||||||| || ||| | ||||||||||||    
T  15267397 ttctcatctttttcatcttcatatcatctctatcaaccttcaacaataagaatcccaaaaaaattccagaagaaaatgaaaaaaaacctaacgtttttga 15267496  T
Q  101 gttaaaactaac 112  Q
     |||||||||||    
T  15267497 attaaaactaac 15267508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 38416362 - 38416287
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaa 77  Q
    ||||||||||||||||||||||||||||||||||||| ||||  ||||| |||| |||||||| ||||||||||||    
T  38416362 ttctcctctttttcatcttcatatcatctccatcaaccttcaagaacaagaatcccagaaaaattccagaagaaaa 38416287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 26289249 - 26289133
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||| ||||||||||||| ||||||||||||||||| |||| |||||| |||| || | ||| | |||||| ||||||| |||   |||||||||| |    
T  26289249 cttctcgtctttttcatctttatatcatctccatcaaccttcaacaacaagaatcccatagaaagttcagaaggaaatgaagaaaatctaacgtttttaa 26289150  T
Q  101 gttaaaactaacggaaa 117  Q
     ||||||||||||||||    
T  26289149 attaaaactaacggaaa 26289133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 31909087 - 31909212
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||| || ||||||||||||||||||||| ||||||| |||| |||||| ||||  || |||  |||||||||||||||| ||| | |||| ||||| |    
T  31909087 cttcttctatttttcatcttcatatcatcttcatcaacgttcaacaacaagaatcctaggaaacttccagaagaaaatgaagaaaacctaacatttttta 31909186  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||| ||||| |||| |||||||    
T  31909187 attaaaattaacgaaaatgaccaaaa 31909212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 135
Target Start/End: Original strand, 5624538 - 5624669
Alignment:
Q  3 tctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagt 102  Q
    |||||| |||||||| |||||||||||| ||||||| |||| |||||| | || |||||||| | ||||| ||||| || |||   |||| ||||||| |    
T  5624538 tctcctatttttcatattcatatcatcttcatcaaccttcaacaacaagattcccagaaaaatttcagaa-aaaatcaaaaaaatctaacttttttgaat 5624636  T
Q  103 taaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||||||||||||| ||||||||  |||||||    
T  5624637 taaaactaacggaaagaaccaaaatgtgtaaca 5624669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 7210613 - 7210736
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||| |||||||||||||||||||||||||||| ||| |||| |||||| ||||           ||||||||||||||| ||| | ||||||||||||    
T  7210613 cttcttctctttttcatcttcatatcatctccataaacattcaacaacaagaatc-----------ccagaagaaaatgaagaaaacctaacgtttttga 7210701  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||||||||  |||||||  |||||||    
T  7210702 attaaaactaacggaaaggaccaaaatgtgtaaca 7210736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 8418415 - 8418336
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaat 82  Q
    |||||||||||||||||||||||||||| ||| ||||| |||| |||||| |||| |||||||| | |||||||||||||||    
T  8418415 cttctcctctttttcatcttcatatcat-tcc-tcaaccttcaacaacaagaatcccagaaaaatttcagaagaaaatgaat 8418336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 14143662 - 14143773
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||| |||||||||||||| ||||||||| ||||||| |||| |||||| |||  ||  |||| |||||||||||||| | ||||| |||  ||||| |    
T  14143662 cttcttctctttttcatctttatatcatctacatcaacgttcaacaacaagaattccaagaaaattccagaagaaaatggagaaaccctaatatttttta 14143761  T
Q  101 gttaaaactaac 112  Q
     |||||| ||||    
T  14143762 attaaaattaac 14143773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 33763062 - 33763182
Alignment:
Q  1 cttctcctctttttcatct-----tcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtt 95  Q
    |||||||||||||||||||     ||||||||||||||||||| || | |||||| |||| |||||||| | || | ||||||||| |||   |||||||    
T  33763062 cttctcctctttttcatcttcatatcatatcatctccatcaaccttgaacaacaagaatcccagaaaaattacaaatgaaaatgaagaaa--ataacgtt 33763159  T
Q  96 tttgagttaaaactaacggaaat 118  Q
    ||||| ||||||| || ||||||    
T  33763160 tttgaattaaaaccaaaggaaat 33763182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 15476487 - 15476404
Alignment:
Q  2 ttctcctctttttcatcttcatatcatc----tccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaa 81  Q
    ||||||||||||||||||||||||||||    || |||||| |||| |||||| |||| || ||||| | ||||||||||||||    
T  15476487 ttctcctctttttcatcttcatatcatctctatctatcaaccttcaacaacaagaatcccaaaaaaatttcagaagaaaatgaa 15476404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 21751014 - 21750901
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||||||||| ||   |||||||| |||||| |||| |||||| ||||  | ||||| |||| || || |||||  || | ||||||||||||    
T  21751014 cttctcctctttttcatttt---atcatctctatcaaccttcaacaacaagaatcctaaaaaaattccaaaataacatgaaggaaacctaacgtttttga 21750918  T
Q  101 gttaaaactaacggaaa 117  Q
     ||||||||||||||||    
T  21750917 attaaaactaacggaaa 21750901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 31656583 - 31656649
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||||| ||||| ||| | |||||||||||| |||||||||||||||| ||||||||  |||||||    
T  31656583 agaagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaagaaccaaaatgtgtaaca 31656649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 19205104 - 19205047
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| ||||| ||| | |||||||||||| ||||||||||||||||| |||||||    
T  19205104 agaagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaa 19205047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 33763066 - 33763000
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    |||||||||| || ||| | |||| ||||||| ||||||||||||||||| |||||||  |||||||    
T  33763066 agaagaaaataaagaaaacctaacatttttgaattaaaactaacggaaatgaccaaaatatgtaaca 33763000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 3878642 - 3878593
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaat 118  Q
    ||||||| ||||| ||| | |||||||||||| |||||||||||||||||    
T  3878642 agaagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaat 3878593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 17861197 - 17861152
Alignment:
Q  71 aagaaaatgaataaaccttaacgtttttgagttaaaactaacggaa 116  Q
    ||||| ||||| ||| |||||||||||||| |||||||||||||||    
T  17861197 aagaagatgaagaaaacttaacgtttttgaattaaaactaacggaa 17861152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 31909091 - 31909034
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| ||||| ||| | |||||||||||| || |||||||||||||| |||||||    
T  31909091 agaagaagatgaagaaaacctaacgtttttgaattgaaactaacggaaatgaccaaaa 31909034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 30611377 - 30611512
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||| || ||||||||| |||||||||||| ||| | ||||||||||||    
T  30611377 cttctcctctttttcatcttcatatcatctccatcaacattcaacaacaagaatcccaaaaaaaatccggaagaaaatgaagaaaacctaacgtttttga 30611476  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
     |||||||||||| |||| |||||||  ||||||||    
T  30611477 attaaaactaacgaaaatgaccaaaatgtgtaacaa 30611512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 13944675 - 13944801
Alignment:
Q  8 tctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaa 107  Q
    ||||||||||||||||||||| | ||||||| |||| |||||| |||| |||||||| |||||||||||||||||||| | |||||||||||| ||||||    
T  13944675 tctttttcatcttcatatcatattcatcaaccttcaacaacaagaatcccagaaaaattccagaagaaaatgaataaaacctaacgtttttgaattaaaa 13944774  T
Q  108 ctaacggaaataaccaaaagttgtaac 134  Q
    ||||||||||| ||||||| |||||||    
T  13944775 ctaacggaaatgaccaaaatttgtaac 13944801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 6181845 - 6181720
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||| | || || ||||| |||||||||||||||| ||| | ||||||||||||    
T  6181845 cttctcctctttttcatctccatatcatctccatcaactttcaacaacaagagtcccaaaaaaattccagaagaaaatgaagaaaacctaacgtttttga 6181746  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||| |||||||    
T  6181745 attaaaactaacggaaatgaccaaaa 6181720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 34028878 - 34029003
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||| ||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| || ||||||||||||| ||| | ||||||||||||    
T  34028878 cttctcatctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattctagaagaaaatgaagaaaacctaacgtttttga 34028977  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||  |||||||    
T  34028978 attaaaactaacggaaaggaccaaaa 34029003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 50921217 - 50921342
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||| ||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| | |||||||||||||||||| | ||||||||||||    
T  50921217 cttctcttctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaatttcagaagaaaatgaataaaacctaacgtttttga 50921316  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||  ||||| |||||||    
T  50921317 attaaaactaattgaaatgaccaaaa 50921342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 18793849 - 18793973
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||| || ||||| |||||||||||||||| ||| | ||||| ||||||    
T  18793849 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccaaaaaaattccagaagaaaatgaagaaaacctaacgcttttga 18793948  T
Q  101 gttaaaactaacggaaataaccaaa 125  Q
     |||||||||||| ||| |||||||    
T  18793949 attaaaactaacgaaaagaaccaaa 18793973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 9119449 - 9119584
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||| ||||| ||||||||||| |||| |||||| |||||||||||||  ||||||||||||||| ||| | ||||||||||||    
T  9119449 cttctcctctttttcatcttaatatcttctccatcaaccttcaacaacaagaatctcagaaaaataccagaagaaaatgaagaaaacctaacgtttttga 9119548  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
     ||||||||||| ||||  |||||||  ||||||||    
T  9119549 attaaaactaactgaaaggaccaaaatgtgtaacaa 9119584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 22584580 - 22584446
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||| ||||| |||| |||||| |||| |||||||| | || ||||||||||| ||| | ||||||||||||    
T  22584580 cttctcctctttttcatcttcatatcatctccgtcaaccttcaacaacaagaatcccagaaaaatttcaaaagaaaatgaagaaaacctaacgtttttga 22584481  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||||||||  |||||||  |||||||    
T  22584480 tttaaaactaacggaaaggaccaaaatgtgtaaca 22584446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 30792669 - 30792535
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| ||||  ||||||| ||||||||| |||||| ||| ||| ||||||||||    
T  30792669 cttctcctctttttcatcttcatatcatctccatcaactttcaataacaagaatcctagaaaaattccagaagataatgaagaaaacttgacgtttttga 30792570  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     |||||||||||  |||| |||||||  |||||||    
T  30792569 attaaaactaacataaatgaccaaaatgtgtaaca 30792535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 51810367 - 51810241
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaa-tccagaagaaaatgaataaaccttaacgtttttg 99  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| |||| ||||||||| | || ||||||||||| ||| | ||| |||||||    
T  51810367 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaaatttcaaaagaaaatgaaaaaaacctaatgtttttg 51810268  T
Q  100 agttaaaactaacggaaataaccaaaa 126  Q
    | ||||||||||||||||| |||||||    
T  51810267 aattaaaactaacggaaatgaccaaaa 51810241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 51692103 - 51691978
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||| ||||||||||||||||| ||||||| |||| |||||| |||| |||||||| |||| ||||||||||| ||| | |||| |||||||    
T  51692103 cttctcctctttctcatcttcatatcatcttcatcaaccttcaacaacaagaatcccagaaaaattccataagaaaatgaagaaaacctaacatttttga 51692004  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||| |||||||    
T  51692003 attaaaactaacggaaatgaccaaaa 51691978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 25088245 - 25088111
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||| ||||||||| |||||||||||||||||||| |||| |||||| |||| |||||||| |||||||||||||||| ||| | ||| ||||||||    
T  25088245 cttctccactttttcattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccagaagaaaatgaagaaaacctaatgtttttga 25088146  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||| ||||  |||||||  |||||||    
T  25088145 attaaaactaaccgaaaggaccaaaatgtgtaaca 25088111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 27209391 - 27209273
Alignment:
Q  8 tctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaa 107  Q
    |||| |||||||||||||||||||||||||| |||| |||||||||||  ||||||| |||| ||||||||||| ||| | ||||| |||||| ||||||    
T  27209391 tcttcttcatcttcatatcatctccatcaaccttcaacaacaaaaatccgagaaaaattccataagaaaatgaagaaaacctaacggttttgaattaaaa 27209292  T
Q  108 ctaacggaaataaccaaaa 126  Q
    ||||||||||| |||||||    
T  27209291 ctaacggaaatgaccaaaa 27209273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 11394818 - 11394939
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||| |||  || |||||||  ||||||||||||| |||   |||| |||||||     
T  11394818 ttctcctcttgttcatcttcatatcatctccatcaactttcaacaacaagaattccaaaaaaaatttagaagaaaatgaagaaaatctaacatttttgaa 11394917  T
Q  102 ttaaaactaacggaaataacca 123  Q
    ||||||||||||||||||||||    
T  11394918 ttaaaactaacggaaataacca 11394939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 34279469 - 34279344
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||| ||||||| |||| |||||| |||| || ||||| | |||||||||||||| ||| | ||||| ||||||    
T  34279469 cttctcctctttttcatcttcatatcatcttcatcaaccttcaacaacaagaatcccaaaaaaatttcagaagaaaatgaagaaaacctaacgcttttga 34279370  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||||| ||| ||||||||    
T  34279369 attaaaactaacgaaaagaaccaaaa 34279344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 46949905 - 46950018
Alignment:
Q  13 ttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaac 112  Q
    ||||||||||||||||| |||||||| |||| ||||||||||| || ||||| || ||||||||||||| ||| | |||||||||||| |||||||||||    
T  46949905 ttcatcttcatatcatccccatcaaccttcaacaacaaaaatcccaaaaaaattctagaagaaaatgaagaaaacctaacgtttttgaattaaaactaac 46950004  T
Q  113 ggaaataaccaaaa 126  Q
    |||||| |||||||    
T  46950005 ggaaatgaccaaaa 46950018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 4045328 - 4045194
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||| |||||||||||||||||||||||||| |||| |||||| |||| || ||||| |||||||||||||||| ||  | ||||||||||||    
T  4045328 cttctcctcttattcatcttcatatcatctccatcaaccttcaacaacaagaatcccaaaaaaattccagaagaaaatgaagaacacctaacgtttttga 4045229  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||  || |||||| |||||||  |||||||    
T  4045228 attaaaatcaatggaaatgaccaaaatgtgtaaca 4045194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 50574743 - 50574609
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| ||| || |||| || ||||| |||||||||||||| | ||| |  || ||| ||||    
T  50574743 cttcttctctttttcatattcatatcatctccatcaactttcaacaaaaataatcccataaaaattccagaagaaaatggagaaaaccgaaagttattga 50574644  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    |||||||||||||||||| |||||||  |||||||    
T  50574643 gttaaaactaacggaaatgaccaaaatgtgtaaca 50574609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 11797403 - 11797279
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||| |||||||||||||||||||||||||||||||| |||| || ||| |||| || ||||||| |||||||||||||| ||||| |||| || ||||    
T  11797403 cttcttctctttttcatcttcatatcatctccatcaaccttcaacatcaagaatcccaaaaaaaattcagaagaaaatgaagaaacc-taacattcttga 11797305  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||  |||||||    
T  11797304 attaaaactaacggaaaggaccaaaa 11797279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 135
Target Start/End: Original strand, 30293171 - 30293304
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    |||| |||||||||||||| ||||||||||||||||| |||| |||||| |||| |||| ||| |||||||||||||||| ||| | |||| |||||||     
T  30293171 ttcttctctttttcatctttatatcatctccatcaaccttcaacaacaagaatcccagagaaattccagaagaaaatgaaaaaaacctaacatttttgaa 30293270  T
Q  102 ttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    |||||||||| |||||  |||||||  |||||||    
T  30293271 ttaaaactaatggaaaataccaaaatgtgtaaca 30293304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 36657658 - 36657783
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||| ||||||||||||||||||||||||||||||| |||| ||||||||||  || ||||| ||  |||||||||||| |||   ||||||||||||    
T  36657658 cttctcatctttttcatcttcatatcatctccatcaaccttcaacaacaaaaattccataaaaattctggaagaaaatgaagaaaatctaacgtttttga 36657757  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||| |||||| |||||||    
T  36657758 attaaaactaatggaaatgaccaaaa 36657783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 40534082 - 40534198
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||| || ||||||||||||||||||||||| |||| |||||||||||  ||||||| |||||||||| ||||| ||| |||||| ||||| |    
T  40534082 cttctcctcttctttatcttcatatcatctccatcaaccttcaacaacaaaaatccgagaaaaattccagaagaacatgaagaaaacttaacatttttta 40534181  T
Q  101 gttaaaactaacggaaa 117  Q
     ||||||||||| ||||    
T  40534182 attaaaactaacagaaa 40534198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 21036146 - 21036256
Alignment:
Q  5 tcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagtta 104  Q
    |||||||||||||||||||||||||||||||||||||   |||||| |||| |||||||| |||||||||| || || ||||| ||| ||| |||| |||    
T  21036146 tcctctttttcatcttcatatcatctccatcaacttt---caacaagaatcccagaaaaattccagaagaacataaagaaaccctaaagttcttgaatta 21036242  T
Q  105 aaactaacggaaat 118  Q
    ||||||||||||||    
T  21036243 aaactaacggaaat 21036256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 24655743 - 24655854
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||| ||||  ||||||| ||| ||||||||| || ||| | ||||||||||||    
T  24655743 cttctcctctttttcatcttcatatcatctccatcacccttcaacaacaagaatcctagaaaaattcctgaagaaaattaagaaaacctaacgtttttga 24655842  T
Q  101 gttaaaactaac 112  Q
     |||||||||||    
T  24655843 attaaaactaac 24655854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 33753386 - 33753489
Alignment:
Q  14 tcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacg 113  Q
    ||||||||||| ||||||||||||| |||| |||||| || |||||||||| ||||||| |||||||| ||| | |||||||||||| ||||||||||||    
T  33753386 tcatcttcataccatctccatcaaccttcaacaacaagaacctcagaaaaattccagaacaaaatgaagaaaacctaacgtttttgaattaaaactaacg 33753485  T
Q  114 gaaa 117  Q
    ||||    
T  33753486 gaaa 33753489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 40703093 - 40702982
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    |||||||||| |||||||||||||||||||| ||||| |||| |||||||||||  ||||||| |||||||||||| ||| ||| | |||| |||||||     
T  40703093 ttctcctcttcttcatcttcatatcatctccgtcaaccttcaacaacaaaaatccgagaaaaattccagaagaaaaggaagaaaacctaacatttttgaa 40702994  T
Q  102 ttaaaactaacg 113  Q
    ||||||||||||    
T  40702993 ttaaaactaacg 40702982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 46738888 - 46739015
Alignment:
Q  8 tctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaa 107  Q
    ||||||||||||||||||||||||||||||| |||| |||||| |||  |||||||| | |||||||||||||| |||   ||| |||||||| ||||||    
T  46738888 tctttttcatcttcatatcatctccatcaaccttcaacaacaagaattccagaaaaatttcagaagaaaatgaagaaaatctaatgtttttgaattaaaa 46738987  T
Q  108 ctaacggaaataaccaaaagttgtaaca 135  Q
    ||||||||||| || ||||  |||||||    
T  46738988 ctaacggaaatgactaaaatgtgtaaca 46739015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 45305639 - 45305513
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||| ||||||||||||||||||| ||||||||| |||| |||||||||||   |||||| |||| || |||||||| ||||  ||||||||||||    
T  45305639 cttctcctgtttttcatcttcatatcatttccatcaaccttcaacaacaaaaatccaggaaaaattccaaaaaaaaatgaagaaacactaacgtttttga 45305540  T
Q  101 gttaaaactaacggaaataaccaaaag 127  Q
     |||||| |||||||||  ||||||||    
T  45305539 attaaaagtaacggaaaagaccaaaag 45305513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 1831831 - 1831943
Alignment:
Q  11 ttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaacta 110  Q
    ||||||||||||||||||||||| |||| ||||  ||||| |||| || ||||| | |||||||||||||| ||| | |||||||||||| |||||||||    
T  1831831 ttttcatcttcatatcatctccaccaaccttcaagaacaagaatcccaaaaaaatttcagaagaaaatgaagaaaacctaacgtttttgaattaaaacta 1831930  T
Q  111 acggaaataacca 123  Q
    |||||||| ||||    
T  1831931 acggaaatgacca 1831943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 10923592 - 10923466
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||| ||||||||||||||||| |||| ||| || |||| || ||||  | |||||||||||||| ||| | ||||||||||||    
T  10923592 cttctcctctttttcatctttatatcatctccatcaaccttcaacaataagaatcccaaaaaagtttcagaagaaaatgaagaaaacataacgtttttga 10923493  T
Q  101 gttaaa-actaacggaaataaccaaaa 126  Q
     ||||| |||||| ||||| |||||||    
T  10923492 attaaatactaaccgaaatgaccaaaa 10923466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 10654254 - 10654133
Alignment:
Q  5 tcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagtta 104  Q
    |||||||||||||||||||||||||||  ||||| |||| |||||| |||| |||||||| |||| ||||||||||  | | | |||||||||||| |||    
T  10654254 tcctctttttcatcttcatatcatctctgtcaaccttcaacaacaagaatcccagaaaaattccataagaaaatgatgagaacctaacgtttttgaatta 10654155  T
Q  105 aaactaacggaaataaccaaaa 126  Q
    ||||||||| |||  |||||||    
T  10654154 aaactaacgaaaaggaccaaaa 10654133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 37199150 - 37199027
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||||           |||||| |||||||| ||| | ||||||||||||    
T  37199150 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaaaaatc-----------ccagaataaaatgaagaaaacctaacgtttttga 37199062  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||||||||  |||||||  |||||||    
T  37199061 attaaaactaacggaaaagaccaaaatgtgtaaca 37199027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 100
Target Start/End: Complemental strand, 12987779 - 12987684
Alignment:
Q  5 tcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||| |||||||||||||||| ||||||||| |||| ||||||||||  |||||||| || | | ||||||||| ||||||||||||||||||    
T  12987779 tcctcttcttcatcttcatatcatatccatcaaccttcaacaacaaaaattccagaaaaattctaaacgaaaatgaagaaaccttaacgtttttga 12987684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 19986348 - 19986245
Alignment:
Q  4 ctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagtt 103  Q
    ||||||||||||||||||||||||||| ||||||| |||| |||||| |||| |||||||| |||| ||||||||||| |||   |||| ||||||| ||    
T  19986348 ctcctctttttcatcttcatatcatctgcatcaaccttcaacaacaagaatcccagaaaaattccaaaagaaaatgaagaaaatctaacatttttgaatt 19986249  T
Q  104 aaaa 107  Q
    ||||    
T  19986248 aaaa 19986245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 24590454 - 24590344
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||| |||| ||| |||| | | |||||||||||| |||   ||||||||||||    
T  24590454 cttctcctctttttcatcttcatatcatctccatcacccttcaacaacaagaatcccag-aaaatttctgaagaaaatgaagaaaatctaacgtttttga 24590356  T
Q  101 gttaaaactaac 112  Q
     |||||||||||    
T  24590355 attaaaactaac 24590344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 4550828 - 4550722
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    |||||||||| |||||||||||||||||||||||||| || | |||||||||||| ||||||| || ||||||| || || |||   ||||||||||||     
T  4550828 ttctcctcttcttcatcttcatatcatctccatcaacctttaacaacaaaaatctgagaaaaattctagaagaacattaagaaaatctaacgtttttgaa 4550729  T
Q  102 ttaaaac 108  Q
    |||||||    
T  4550728 ttaaaac 4550722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 135
Target Start/End: Original strand, 42607671 - 42607793
Alignment:
Q  13 ttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaac 112  Q
    |||||||| ||||||||| ||||||| || | ||| || ||||||||||||| | |||||||||||||| |||   |||| ||||||| |||||||||||    
T  42607671 ttcatctttatatcatcttcatcaacctttaacaaaaagaatctcagaaaaatttcagaagaaaatgaagaaaatctaacctttttgaattaaaactaac 42607770  T
Q  113 ggaaataaccaaaagttgtaaca 135  Q
    |||||  ||||||| ||||||||    
T  42607771 ggaaaggaccaaaatttgtaaca 42607793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 29257052 - 29256975
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaat 78  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||| |||| ||| |||| |||||||||||||    
T  29257052 cttctcctctttttcatcttcatatcatctccatcaatcttcaacaacaagaatcccagcaaaattccagaagaaaat 29256975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 52412820 - 52412692
Alignment:
Q  8 tctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaa 107  Q
    |||||||||||||||||||||||   ||||| |||| ||||||||||| | |||||| ||||||| ||||| || ||| | ||||||||| || ||||||    
T  52412820 tctttttcatcttcatatcatctttttcaaccttcaacaacaaaaatcccggaaaaattccagaaaaaaataaaaaaaacctaacgttttggaattaaaa 52412721  T
Q  108 ctaacggaaataaccaaaagttgtaacaa 136  Q
    |||| |||||  |||||||  ||||||||    
T  52412720 ctaatggaaaggaccaaaatgtgtaacaa 52412692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 2125437 - 2125362
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaa 77  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||| || ||||||||||||| | ||||||||||    
T  2125437 ttctcttctttttcatcttcatatcatctccatcaaccttcaacaataagaatctcagaaaaatttcagaagaaaa 2125362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 5463347 - 5463221
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacg-tttttg 99  Q
    |||||||||||||||||||||||||||||||||||  | |||| |||||| ||| ||||||||  | || ||||||||||| ||| | ||||| |||||     
T  5463347 cttctcctctttttcatcttcatatcatctccatcggccttcaacaacaagaatttcagaaaactttcaaaagaaaatgaagaaaacctaacgttttttt 5463248  T
Q  100 agttaaaactaacggaaataaccaaaa 126  Q
    | |||||||| |||||||  |||||||    
T  5463247 aattaaaactgacggaaaggaccaaaa 5463221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11787897 - 11788014
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcag-aaaaaatccagaagaaaatgaataaaccttaacgtttttg 99  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||| ||||  || |||||    ||||||| ||||| |||   |||||||||||    
T  11787897 cttctcctctttttcatcttcatatcatctccatcaaccttcaacaacaagaatccaagcaaaaagaggagaagaagatgaagaaaatctaacgtttttg 11787996  T
Q  100 agttaaaactaacggaaa 117  Q
    | ||||||||||| ||||    
T  11787997 aattaaaactaacagaaa 11788014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 32564179 - 32564103
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaa 77  Q
    ||||||||||||||||| |||||||||||||||||||| |||| |||||| |||  |||||||| | ||||||||||    
T  32564179 cttctcctctttttcattttcatatcatctccatcaacattcaacaacaagaattccagaaaaatttcagaagaaaa 32564103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 14775964 - 14775840
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||| ||||||||||||||||||||||| ||||          || |||| |||||||||| |||||||||||||| ||| | ||||||||||||    
T  14775964 cttctcctccttttcatcttcatatcatctccaacaac----------aagaatcccagaaaaaattcagaagaaaatgaagaaaacctaacgtttttga 14775875  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     |||||||||||| |||  |||||||  |||||||    
T  14775874 attaaaactaacgaaaaggaccaaaatgtgtaaca 14775840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 34621791 - 34621917
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccag--aagaaaatgaataaaccttaacgtttttg 99  Q
    |||||||||| ||||||||||||| || | ||||||| |||| |||||||||| | ||| ||| || ||  || |||||||| |||  ||||||||||||    
T  34621791 ttctcctcttcttcatcttcatattattttcatcaaccttcaacaacaaaaatttgagataaattctagaaaaaaaaatgaagaaaatttaacgtttttg 34621890  T
Q  100 agttaaaactaacggaaataaccaaaa 126  Q
    | ||||||||||| ||||| |||||||    
T  34621891 aattaaaactaactgaaatgaccaaaa 34621917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 21385093 - 21385218
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||||||||||||||||||||||  ||| |  ||||  ||||| |||| |||||| | |||| ||| ||||| | ||| | ||||||||||||    
T  21385093 cttctcctctttttcatcttcatatcatctgtatcgatcttcaataacaagaatcccagaaatattccataagcaaatgtagaaaacctaacgtttttga 21385192  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||  ||||||||| |||||||    
T  21385193 attaaaatcaacggaaatgaccaaaa 21385218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 48702048 - 48702101
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaat 54  Q
    ||||||||||| |||||||||||||||||||||||||| |||| ||||||||||    
T  48702048 cttctcctcttcttcatcttcatatcatctccatcaaccttcaacaacaaaaat 48702101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 36884872 - 36884932
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaa 61  Q
    ||||||||||||||||||||||||||||| |||||||| |||| |||||| |||| |||||    
T  36884872 cttctcctctttttcatcttcatatcatccccatcaaccttcaacaacaagaatcccagaa 36884932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 20260608 - 20260530
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatg 79  Q
    ||||||||||| |||||||||| ||||| |||||| || |||| |||||||||||  ||||||| ||||||| ||||||    
T  20260608 cttctcctcttcttcatcttcacatcatatccatcgaccttcaacaacaaaaatccaagaaaaattccagaacaaaatg 20260530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 49291163 - 49291105
Alignment:
Q  60 aaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaat 118  Q
    ||||| |||||||||||||||| ||| | |||||||||||| |||||||||||||||||    
T  49291163 aaaaattccagaagaaaatgaagaaaacctaacgtttttgaattaaaactaacggaaat 49291105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 16267912 - 16267972
Alignment:
Q  66 tccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    |||||||||||||||| ||| | |||||||||||| ||||||||||| |||| ||||||||    
T  16267912 tccagaagaaaatgaagaaaacctaacgtttttgaattaaaactaacagaaagaaccaaaa 16267972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 28112899 - 28112967
Alignment:
Q  13 ttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaa 81  Q
    |||||||||||||||| ||||||||| |||| |||||| |||| || ||||| | ||||||||||||||    
T  28112899 ttcatcttcatatcatatccatcaaccttcaacaacaagaatcccataaaaatttcagaagaaaatgaa 28112967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 118
Target Start/End: Complemental strand, 31126149 - 31126041
Alignment:
Q  10 tttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaact 109  Q
    ||||||||||||||||||||||| ||||  || | |||||| |||| |||||||  | |||||||||||||| |||   |||| ||||| | |||||| |    
T  31126149 tttttcatcttcatatcatctccgtcaatcttaaacaacaagaatcccagaaaacttacagaagaaaatgaagaaaatctaacattttttaattaaaatt 31126050  T
Q  110 aacggaaat 118  Q
    |||||||||    
T  31126049 aacggaaat 31126041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 5118229 - 5118155
Alignment:
Q  52 aatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    |||| |||||||| | |||||||||||||| ||| | ||| |||||||| ||||||||||| ||||| |||||||    
T  5118229 aatcccagaaaaatttcagaagaaaatgaagaaaacctaatgtttttgaattaaaactaacagaaatgaccaaaa 5118155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 13831251 - 13831197
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatc 55  Q
    |||||||||||||||||||||||||||||| ||||||  |||| |||||| ||||    
T  13831251 cttctcctctttttcatcttcatatcatcttcatcaatcttcaacaacaagaatc 13831197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 25088241 - 25088307
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||||| ||||| ||| |||||||||||||| ||||||||||||||||  |||||||  |||||||    
T  25088241 agaagaagatgaagaaaacttaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaaca 25088307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 29257048 - 29257105
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| ||||| ||| | |||||||||||| ||||||||||||||||| |||||||    
T  29257048 agaagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaa 29257105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 37199146 - 37199203
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| ||||| ||| | |||||||||||| ||||||||||||||||| |||||||    
T  37199146 agaagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaa 37199203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 10654256 - 10654320
Alignment:
Q  71 aagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||| ||||| ||| | |||||||||||| ||||||||||||||||| |||||||  |||||||    
T  10654256 aagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaaca 10654320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 36657662 - 36657614
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaa 117  Q
    ||||||||||||| ||| | |||||||||||| ||||||||||||||||    
T  36657662 agaagaaaatgaagaaaacctaacgtttttgaattaaaactaacggaaa 36657614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 34028882 - 34028815
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
    ||||||| ||||| ||| | |||||||||||| ||||||||||||||||  |||||||  ||||||||    
T  34028882 agaagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacaa 34028815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 3569518 - 3569472
Alignment:
Q  89 taacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    |||||||||||| ||||||||||||||||| |||||||  |||||||    
T  3569518 taacgtttttgaattaaaactaacggaaattaccaaaatgtgtaaca 3569472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 14775960 - 14776026
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||||| ||||| ||| | |||||||||||| |||||| |||||||||| |||||||  |||||||    
T  14775960 agaagaagatgaagaaaacctaacgtttttgaattaaaattaacggaaatgaccaaaatgtgtaaca 14776026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 24590470 - 24590516
Alignment:
Q  89 taacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    |||||||||||| ||||||||||||||||| |||||||  |||||||    
T  24590470 taacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaaca 24590516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 30792665 - 30792722
Alignment:
Q  69 agaagaaaatgaa-taaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| ||||| ||||||| ||||||||||| ||||||||||||||||| |||||||    
T  30792665 agaagaagatgaagtaaacct-aacgtttttgaattaaaactaacggaaatgaccaaaa 30792722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 35986389 - 35986431
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttca 43  Q
    |||||||||||||||||||||||||||| || |||||| ||||    
T  35986389 cttctcctctttttcatcttcatatcatttctatcaaccttca 35986431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 42607663 - 42607617
Alignment:
Q  89 taacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    |||||||||||| ||||||||||||||||| |||||||  |||||||    
T  42607663 taacgtttttgaattaaaactaacggaaatgaccaaaatgtgtaaca 42607617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 45305635 - 45305701
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaaca 135  Q
    ||||||||||||| ||||  |||||||||| | |||||||||||| |||| |||||||  |||||||    
T  45305635 agaagaaaatgaaaaaactctaacgttttttaattaaaactaacgtaaatgaccaaaatgtgtaaca 45305701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 11787901 - 11787844
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||||||||| |||   |||||||||||| ||||||||||||||||  |||||||    
T  11787901 agaagaaaatgaagaaaatctaacgtttttgaattaaaactaacggaaaggaccaaaa 11787844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 126
Target Start/End: Complemental strand, 30293154 - 30293117
Alignment:
Q  89 taacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  30293154 taacgtttttgaattaaaactaacggaaatgaccaaaa 30293117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 32517758 - 32517795
Alignment:
Q  89 taacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  32517758 taacgtttttgaattaaaactaacggaaatgaccaaaa 32517795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 16267872 - 16267904
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctcca 33  Q
    ||||||||||||||||||||||| |||||||||    
T  16267872 cttctcctctttttcatcttcatttcatctcca 16267904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 13698 - 13833
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||| ||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| |||||||||||||||| ||| |  |||||||||||    
T  13698 cttctcatctttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaaaaattccagaagaaaatgaagaaaacccaacgtttttga 13797  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
     ||||||  |||||||||||||||||  ||||||||    
T  13798 attaaaatcaacggaaataaccaaaatgtgtaacaa 13833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 11442 - 11308
Alignment:
Q  2 ttctcctcttttt-catcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||||| |||||||||||||||||||||||| |||| |||||| |||| ||||| || |||||||||||||||| ||| | ||||||||||||    
T  11442 ttctcctcttttttcatcttcatatcatctccatcaaccttcaacaacaagaatcccagaataattccagaagaaaatgaagaaaacctaacgtttttga 11343  T
Q  101 gttaaaactaacggaaataaccaaaagttgtaaca 135  Q
     ||||||||||||||||  |||||||  |||||||    
T  11342 attaaaactaacggaaaggaccaaaatgtgtaaca 11308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 40581 - 40456
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||| ||||||||||||||||||||||||||||||| || | ||| || |||| || ||||| | |||||||||||||| ||| ||||||||||||||    
T  40581 cttctcttctttttcatcttcatatcatctccatcaacctttaacaaaaagaatcccataaaaatttcagaagaaaatgaagaaaacttaacgtttttga 40482  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     |||||||||||||||| ||||||||    
T  40481 attaaaactaacggaaagaaccaaaa 40456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 93347 - 93463
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||| |||||||||||||||||||||||||| |||| |||||| ||| | ||||||| || ||||||||||||| ||||| || |||||||||    
T  93347 cttctcctcttcttcatcttcatatcatctccatcaaccttcaacaacaataatttgagaaaaattcaagaagaaaatgaa-aaaccctaccgtttttga 93445  T
Q  101 gttaaaactaacggaaat 118  Q
     |||||||||||||||||    
T  93446 attaaaactaacggaaat 93463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 93351 - 93294
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    ||||||| ||||| ||||| |||||||||||| |||||||||||| |||  |||||||    
T  93351 agaagaagatgaaaaaaccctaacgtttttgaattaaaactaacgtaaaggaccaaaa 93294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1436 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold1436
Description:

Target: scaffold1436; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 1703 - 1580
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||||||||||||||||||||||||||||||| ||| |||| |||||| |||  |||||||| ||||||||||||| || |||   |||||| |||||     
T  1703 ttctcctctttttcatcttcatatcatctccataaaccttcaacaacaagaattccagaaaaattccagaagaaaataaagaaaagctaacgtgtttgaa 1604  T
Q  102 ttaaaactaacggaaataaccaaa 125  Q
    ||||||||||||||||| ||||||    
T  1603 ttaaaactaacggaaatgaccaaa 1580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 4487 - 4600
Alignment:
Q  13 ttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaat-ccagaagaaaatgaataaaccttaacgtttttgagttaaaactaa 111  Q
    |||||||||||||||||||||||||  |||| |||||| |||| | |||||||| ||||||||||||||| ||| | |||||||||||| ||||||||||    
T  4487 ttcatcttcatatcatctccatcaatcttcagcaacaataatc-ctgaaaaaattccagaagaaaatgaagaaaacctaacgtttttgaattaaaactaa 4585  T
Q  112 cggaaataaccaaaa 126  Q
    ||||||  |||||||    
T  4586 cggaaaggaccaaaa 4600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 126
Target Start/End: Complemental strand, 4479 - 4442
Alignment:
Q  89 taacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  4479 taacgtttttgaattaaaactaacggaaatgaccaaaa 4442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 91665 - 91790
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    |||||| | ||||||||||||||||||||||||||| | |||| |||||| |||| || ||||| ||| |||||||||||| ||| | ||| | ||||||    
T  91665 cttctcatatttttcatcttcatatcatctccatcacccttcaacaacaagaatcccaaaaaaattcctgaagaaaatgaagaaaacctaatgattttga 91764  T
Q  101 gttaaaactaacggaaataaccaaaa 126  Q
     ||||||||||||||||  |||||||    
T  91765 attaaaactaacggaaaggaccaaaa 91790  T

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Target: scaffold0016; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 91036 - 90909
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaa--tccagaagaaaatgaataaaccttaacgttttt 98  Q
    |||||||| ||||||||||||||||||||||||||| | |||| |||||| ||||||| ||||||  ||| |||||||||||| ||| | |||   ||||    
T  91036 cttctcctatttttcatcttcatatcatctccatcacccttcaacaacaagaatctcaaaaaaaaattcctgaagaaaatgaagaaaacctaataatttt 90937  T
Q  99 gagttaaaactaacggaaataaccaaaa 126  Q
    || ||||||||||||||||  |||||||    
T  90936 gaattaaaactaacggaaaggaccaaaa 90909  T

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Target: scaffold0045 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 65896 - 66006
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||||||||| ||||||| ||||| |||||  |||| |||||| |||  |||||||| | |||||||||||||| ||| | |||| |||||||    
T  65896 cttctcctctttttcattttcatattatctctatcaatcttcaacaacaataattccagaaaaatttcagaagaaaatgaagaaaacctaacatttttga 65995  T
Q  101 gttaaaactaa 111  Q
     ||||||||||    
T  65996 attaaaactaa 66006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 73228 - 73338
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttga 100  Q
    ||||||||||||||||| ||||||| ||||| |||||  |||| |||||| |||  |||||||| | |||||||||||||| ||| | |||| |||||||    
T  73228 cttctcctctttttcattttcatattatctctatcaatcttcaacaacaataattccagaaaaatttcagaagaaaatgaagaaaacctaacatttttga 73327  T
Q  101 gttaaaactaa 111  Q
     ||||||||||    
T  73328 attaaaactaa 73338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 45065 - 44988
Alignment:
Q  1 cttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaat 78  Q
    |||||||||||||| || |||||||||||||||||||| |||| |||||| |||| |||||||  | |||||||||||    
T  45065 cttctcctctttttaattttcatatcatctccatcaaccttcaacaacaagaatcccagaaaattttcagaagaaaat 44988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 45061 - 45128
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
    ||||||| ||||| ||| | |||||||||||| |||||||||||| |||| |||||||  ||||||||    
T  45061 agaagaagatgaagaaaacctaacgtttttgaattaaaactaacgaaaatgaccaaaatgtgtaacaa 45128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 11840 - 11762
Alignment:
Q  58 agaaaaaatccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaagttgtaacaa 136  Q
    ||||||| || ||||||||||||| ||| | |||||||||||| ||||||||||||||||  |||||||  ||||||||    
T  11840 agaaaaattctagaagaaaatgaagaaaacctaacgtttttgaattaaaactaacggaaaggaccaaaatgtgtaacaa 11762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 11732 - 11769
Alignment:
Q  89 taacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    |||||||||||| |||||||||||||||||||||||||    
T  11732 taacgtttttgaattaaaactaacggaaataaccaaaa 11769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 11715 - 11592
Alignment:
Q  2 ttctcctctttttcatcttcatatcatctccatcaactttcaccaacaaaaatctcagaaaaaatccagaagaaaatgaataaaccttaacgtttttgag 101  Q
    ||||| |||||| |||||| ||||||||||||||||| |||| ||| || ||||| ||||||| || | ||| ||||||  |||   |||||||||| |     
T  11715 ttctcatcttttgcatcttaatatcatctccatcaacattcaacaagaagaatcttagaaaaattctataag-aaatgaggaaaatctaacgtttttaaa 11617  T
Q  102 ttaaaactaacggaaataaccaaaa 126  Q
    |||||||||||| |||  |||||||    
T  11616 ttaaaactaacgaaaaagaccaaaa 11592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 26100 - 26040
Alignment:
Q  66 tccagaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaataaccaaaa 126  Q
    |||||||||||||||  ||| | |||||||||||| |||||||||| |||||  |||||||    
T  26100 tccagaagaaaatgatgaaaacctaacgtttttgaattaaaactaaaggaaaggaccaaaa 26040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 177290 - 177338
Alignment:
Q  69 agaagaaaatgaataaaccttaacgtttttgagttaaaactaacggaaa 117  Q
    ||||||| ||||| ||| | |||||||||||| ||||||||||||||||    
T  177290 agaagaagatgaagaaaacctaacgtttttgaattaaaactaacggaaa 177338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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