View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10469_low_9 (Length: 242)
Name: NF10469_low_9
Description: NF10469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10469_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 14 - 224
Target Start/End: Original strand, 11454787 - 11454997
Alignment:
| Q |
14 |
atatatatagttagagaaaccacatagaagcctctatcttaaatttaatctcattgtctcatagatacttccaactacacgacaattacgcgtatcatat |
113 |
Q |
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| T |
11454787 |
atatatatagttagagaaaccacatagaagcctctatcttaaatttaatctcattgtctcatagatacttccaactacacgacaattacgcgtatcatat |
11454886 |
T |
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| Q |
114 |
ttaaattttcatatatttcatgtaataaaaaacaaggttcctttattatttatttatttttgactaagatataaggttgcttagtattgactatatatta |
213 |
Q |
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| T |
11454887 |
tttaattttcatatatttcatgtaataaaaaacaaggttcctttattatttatttatttttgactaagatataaggttgcttagtattgactatatatta |
11454986 |
T |
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| Q |
214 |
tacgaggacaa |
224 |
Q |
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| T |
11454987 |
tacgaggacaa |
11454997 |
T |
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