View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10470_low_10 (Length: 352)
Name: NF10470_low_10
Description: NF10470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10470_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 15 - 336
Target Start/End: Original strand, 13794068 - 13794389
Alignment:
| Q |
15 |
ataaggagaaaatatgctagtgggaggctactacacaagaagtttagaatcctgtttcgatgcgatggaggccaaatatgaataggatgataaggagaaa |
114 |
Q |
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| T |
13794068 |
ataaggagaaaatatgctagtgggaggctactatgcaagaagtttagaatcctgtttcaatgcgatggaggccaaatatgaataggatgataaggagaaa |
13794167 |
T |
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| Q |
115 |
aattttcacaactacatacgcataggcaaggatgttgatgcagattgtaaaagcatcaaaacgatattgataaagttgtctatttgtgtcttccaacgac |
214 |
Q |
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| T |
13794168 |
atttttcacaactacatacgcataggcaaggatgttgatgcagattgtaaaagcatcaaaacgatattgacaaagttgtctatttgtgtcttccaacgac |
13794267 |
T |
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| Q |
215 |
ccatccacgatctgtttatcgactgtggtaaagattttattaccatctcttctggtcttaggtgcagtctgtgggaagcagtgacttttggggcttatat |
314 |
Q |
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| T |
13794268 |
ccatccacgatctgtttatcgactgtggtaaagattttattaccatctcttctggtctcaggtgcagtctgtgggaagcagtgacttttggggcttatat |
13794367 |
T |
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| Q |
315 |
gtttgaatcggacaaagataag |
336 |
Q |
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| T |
13794368 |
gtttgaatcgaacaaagataag |
13794389 |
T |
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