View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10470_low_20 (Length: 285)
Name: NF10470_low_20
Description: NF10470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10470_low_20 |
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Alignment Details
Target: chr6 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 1 - 280
Target Start/End: Complemental strand, 3218127 - 3217848
Alignment:
| Q |
1 |
aaaatcagaaggacactagtataagaatagaaggaatagtgaaaagcctgataggtcactatgaagaagcatcttcacaaacaaaattatattccatctt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3218127 |
aaaatcagaaggacactagtataagaatagaaggaatagtgaaaagcctgataggtcactatgaagaagcatcttcacaaacaaaattatattccatctt |
3218028 |
T |
|
| Q |
101 |
aataattattgtacaatccaacaaagtagcctaaaaagcatcatgctacaaaccttatcatgtttgtaaaatgtcctaaaacattattcaacacttaaga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3218027 |
aataattattgtacaatccaacaaagtagcctaaaaagcatcatgctacaaaccttatcatgtttgtaaaatgtcctaaaacattattcaacacttaaga |
3217928 |
T |
|
| Q |
201 |
catagcatcatcatgatttccttaattgatgtctatcatgtagtaacagccactgtcccattatatgtacctatgctact |
280 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |
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| T |
3217927 |
catagcatcatcatgatttccttaattgatgtctatcatgtagtaacagccactgtcccattatatgtaactatgttact |
3217848 |
T |
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