View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10470_low_4 (Length: 477)
Name: NF10470_low_4
Description: NF10470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10470_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 456; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 456; E-Value: 0
Query Start/End: Original strand, 1 - 460
Target Start/End: Complemental strand, 38466676 - 38466217
Alignment:
| Q |
1 |
aaaacactatcagagctcaaaactccaaacactggcttttgattcacatactcaaatatggaacctatctgtaaatcaaattcaaaacattatataatac |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
38466676 |
aaaacactatcagagctcaaaactccaaacactggcttttgattcacatactcaaatatcgaacctatctgtaaatcaaattcaaaacattatataatac |
38466577 |
T |
|
| Q |
101 |
aattacaaaagtagcagaaaagtaaaaagagaaaagaggttagttatttacagcggcaattgcagtgatagcagaggcaagtaaataaacataaaacgga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38466576 |
aattacaaaagtagcagaaaagtaaaaagagaaaagaggttagttatttacagcggcaattgcagtgatagcagaggcaagtaaataaacataaaacgga |
38466477 |
T |
|
| Q |
201 |
ataacaaatccttgttgttcagaagaagagggtttgttttgggcttcattttgagcccatggaggaggttcttctgagtcaggcttagcccatgaaggga |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38466476 |
ataacaaatccttgttgttcagaagaagagggtttgttttgggcttcattttgagcccatggaggaggttcttctgagtcaggcttagcccatgaaggga |
38466377 |
T |
|
| Q |
301 |
ttttttcatcggatttacttgactctgctgagcctttggtcactgccactgttaaaaacttgtgtggtgattttttgttactgaggaacgttttctgaca |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38466376 |
ttttttcatcggatttacttgactctgctgagcctttggtcactgccactgttaaaaacttgtgtggtgattttttgttactgaggaacgttttctgaca |
38466277 |
T |
|
| Q |
401 |
taggggaatgcctaaaaaggttgtgggttgtgatgcatggcggttttgtaaggtacatac |
460 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38466276 |
taggggaatgcctaaaaaggttgtgggttgtgatgcatggcggttttgtaaggtacatac |
38466217 |
T |
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