View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10471_low_13 (Length: 239)
Name: NF10471_low_13
Description: NF10471
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10471_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 117153 - 116927
Alignment:
| Q |
1 |
atgttcataaattttaagtttatcattcacttttcctgtcacattagtactttgggtggtgaacaacacattaatactgcaaatacaaggttgtatcttg |
100 |
Q |
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| T |
117153 |
atgttcataaattttaagtttatcattcacttttcctgtcacattagtactttgagtggtgaacaacacattaatactgcaaatacaaggttgtatcttg |
117054 |
T |
|
| Q |
101 |
tcttccattaacacgttgttttcatccagattaagtgcaacccaacaaaccaaaggcatgttagtaa-ttagcaagacctaccaattactacataattta |
199 |
Q |
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| T |
117053 |
tcttccattaacacgttgttttcatccagattaagtgcaacccaacaaaccaaaggcatgttagtaatttagcaagacctaccaattactacataattta |
116954 |
T |
|
| Q |
200 |
ttgaatgataagttgacaactatttga |
226 |
Q |
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||||||||||||||||||||||||||| |
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| T |
116953 |
ttgaatgataagttgacaactatttga |
116927 |
T |
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