View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10473_low_21 (Length: 241)
Name: NF10473_low_21
Description: NF10473
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10473_low_21 |
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Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 35430060 - 35430278
Alignment:
| Q |
1 |
ccatgctttaaaattgttcaattatgttacttttttccctgtatagattatctgaattagagagtagcttacatgcttgattactcaatataggttaaac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
35430060 |
ccatgctttaaaattgttcaattatgttacttttttccctgtatagattatctgaattagagagtatcttacatgcttgattactcaatataggttaaac |
35430159 |
T |
|
| Q |
101 |
aaacacnnnnnnnntactcttaaattccattacttcgcttttaggagcacttaggaaaaaagaagaatgtacacagagaaagtgtacgtcatctagaaaa |
200 |
Q |
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|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35430160 |
aaacacaaaa----tactcttaaatcccattacttcgcttttaggagcacttaggaaaaaagaagaatgtacacagagaaagtgtacgtcatctagaaaa |
35430255 |
T |
|
| Q |
201 |
ttttaatcatatgaatgtacatc |
223 |
Q |
| |
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||||||||||||||||||||||| |
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|
| T |
35430256 |
ttttaatcatatgaatgtacatc |
35430278 |
T |
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