View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10474_high_9 (Length: 228)

Name: NF10474_high_9
Description: NF10474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10474_high_9
NF10474_high_9
[»] chr3 (20 HSPs)
chr3 (66-223)||(35375407-35375564)
chr3 (74-119)||(43903434-43903479)
chr3 (72-119)||(48795439-48795486)
chr3 (66-116)||(5335366-5335416)
chr3 (73-119)||(14998147-14998193)
chr3 (74-120)||(29698321-29698367)
chr3 (66-119)||(9252207-9252259)
chr3 (74-115)||(52776453-52776494)
chr3 (73-116)||(47175829-47175872)
chr3 (77-119)||(37626938-37626980)
chr3 (74-119)||(8966293-8966337)
chr3 (74-119)||(32121899-32121944)
chr3 (66-119)||(35748922-35748974)
chr3 (72-117)||(41982345-41982389)
chr3 (74-119)||(52058514-52058559)
chr3 (83-115)||(4393517-4393549)
chr3 (71-119)||(29806368-29806415)
chr3 (83-119)||(29815499-29815535)
chr3 (74-118)||(41982391-41982435)
chr3 (73-117)||(46507363-46507406)
[»] chr2 (17 HSPs)
chr2 (71-119)||(2859359-2859407)
chr2 (72-119)||(5615743-5615790)
chr2 (75-118)||(12002707-12002750)
chr2 (66-121)||(25740340-25740395)
chr2 (72-119)||(38073106-38073153)
chr2 (73-119)||(45690499-45690545)
chr2 (74-119)||(8333891-8333936)
chr2 (74-119)||(15362469-15362514)
chr2 (74-119)||(41555431-41555476)
chr2 (71-119)||(40287706-40287754)
chr2 (72-119)||(11088585-11088632)
chr2 (74-115)||(8362405-8362446)
chr2 (74-115)||(12071515-12071556)
chr2 (74-119)||(34188896-34188941)
chr2 (74-119)||(40810780-40810825)
chr2 (83-119)||(37781866-37781902)
chr2 (71-119)||(38617728-38617775)
[»] chr8 (23 HSPs)
chr8 (74-119)||(32887666-32887711)
chr8 (66-118)||(6804009-6804061)
chr8 (74-113)||(12107490-12107529)
chr8 (74-113)||(35754465-35754504)
chr8 (73-119)||(34057829-34057875)
chr8 (73-114)||(12801466-12801507)
chr8 (74-119)||(38764738-38764783)
chr8 (72-116)||(463838-463882)
chr8 (74-117)||(2666866-2666909)
chr8 (74-117)||(30777274-30777317)
chr8 (74-117)||(34520932-34520975)
chr8 (66-116)||(6631467-6631516)
chr8 (73-119)||(41674845-41674891)
chr8 (73-114)||(2879936-2879977)
chr8 (74-119)||(12632904-12632949)
chr8 (74-119)||(17792566-17792610)
chr8 (74-119)||(23870268-23870313)
chr8 (74-119)||(26439509-26439553)
chr8 (73-118)||(28886042-28886087)
chr8 (66-119)||(36672010-36672062)
chr8 (83-116)||(39722325-39722358)
chr8 (83-119)||(5273420-5273456)
chr8 (71-119)||(31158913-31158960)
[»] chr4 (31 HSPs)
chr4 (74-119)||(15060916-15060961)
chr4 (74-119)||(4491217-4491262)
chr4 (74-122)||(126940-126987)
chr4 (74-122)||(19527085-19527133)
chr4 (72-119)||(32570727-32570774)
chr4 (73-119)||(27950258-27950304)
chr4 (66-116)||(31999079-31999128)
chr4 (74-119)||(34927102-34927147)
chr4 (66-119)||(46663680-46663732)
chr4 (80-119)||(3690880-3690919)
chr4 (74-117)||(39103539-39103582)
chr4 (72-119)||(42177342-42177388)
chr4 (71-118)||(53936508-53936554)
chr4 (66-116)||(408417-408466)
chr4 (73-115)||(25607694-25607736)
chr4 (74-119)||(595296-595341)
chr4 (74-119)||(4695669-4695714)
chr4 (74-119)||(4720833-4720877)
chr4 (77-118)||(12756367-12756408)
chr4 (74-119)||(22789582-22789627)
chr4 (73-114)||(25684098-25684139)
chr4 (66-119)||(27761400-27761452)
chr4 (66-119)||(30060530-30060582)
chr4 (74-119)||(31975911-31975956)
chr4 (74-119)||(34584182-34584227)
chr4 (74-119)||(49286688-49286733)
chr4 (83-115)||(18051778-18051810)
chr4 (71-119)||(24566367-24566415)
chr4 (75-119)||(29582329-29582372)
chr4 (71-115)||(38960969-38961013)
chr4 (75-119)||(50776135-50776178)
[»] chr1 (27 HSPs)
chr1 (75-119)||(38207529-38207573)
chr1 (74-119)||(7435875-7435920)
chr1 (66-119)||(25702435-25702487)
chr1 (66-119)||(51610536-51610588)
chr1 (71-119)||(23539942-23539990)
chr1 (72-119)||(17644390-17644437)
chr1 (73-119)||(32912211-32912257)
chr1 (74-119)||(40054949-40054994)
chr1 (74-119)||(43916346-43916391)
chr1 (74-119)||(44808766-44808811)
chr1 (74-119)||(49982456-49982501)
chr1 (74-122)||(26423838-26423886)
chr1 (71-119)||(51787464-51787511)
chr1 (78-113)||(10574700-10574735)
chr1 (74-121)||(36735510-36735557)
chr1 (73-119)||(39084710-39084756)
chr1 (73-119)||(40868134-40868180)
chr1 (73-119)||(50533904-50533950)
chr1 (74-119)||(1845073-1845118)
chr1 (74-119)||(8396711-8396755)
chr1 (66-119)||(12105160-12105212)
chr1 (66-119)||(24511933-24511985)
chr1 (74-119)||(29877702-29877747)
chr1 (74-119)||(38261165-38261209)
chr1 (74-119)||(51004790-51004835)
chr1 (66-119)||(52345599-52345651)
chr1 (83-119)||(17203117-17203153)
[»] chr7 (13 HSPs)
chr7 (74-119)||(29688924-29688969)
chr7 (74-119)||(21919688-21919733)
chr7 (73-114)||(27800033-27800074)
chr7 (71-116)||(43542138-43542183)
chr7 (71-118)||(2089221-2089268)
chr7 (73-119)||(19345972-19346018)
chr7 (73-119)||(45701031-45701077)
chr7 (74-119)||(5215386-5215431)
chr7 (66-119)||(26605056-26605108)
chr7 (74-119)||(31743663-31743708)
chr7 (73-109)||(24149127-24149163)
chr7 (71-119)||(38882818-38882866)
chr7 (72-116)||(41968435-41968478)
[»] chr6 (21 HSPs)
chr6 (74-119)||(1705967-1706012)
chr6 (74-119)||(10887809-10887854)
chr6 (74-119)||(14507982-14508027)
chr6 (66-119)||(19474025-19474078)
chr6 (66-119)||(31644410-31644462)
chr6 (73-119)||(6295738-6295784)
chr6 (73-119)||(6302548-6302594)
chr6 (74-119)||(2994322-2994367)
chr6 (74-119)||(10965985-10966030)
chr6 (74-119)||(21294151-21294196)
chr6 (74-119)||(24249167-24249212)
chr6 (66-119)||(29023619-29023671)
chr6 (71-119)||(9662117-9662164)
chr6 (73-119)||(14002398-14002444)
chr6 (73-119)||(24151124-24151170)
chr6 (81-119)||(34286732-34286770)
chr6 (74-115)||(7344325-7344366)
chr6 (66-119)||(33574707-33574759)
chr6 (66-119)||(33574885-33574937)
chr6 (73-117)||(16893258-16893302)
chr6 (73-113)||(21998974-21999014)
[»] chr5 (25 HSPs)
chr5 (74-119)||(5204617-5204662)
chr5 (74-119)||(40756541-40756586)
chr5 (72-122)||(4039466-4039516)
chr5 (74-119)||(4429781-4429826)
chr5 (74-119)||(5512682-5512727)
chr5 (66-119)||(31588588-31588641)
chr5 (74-119)||(34901657-34901702)
chr5 (66-119)||(35162664-35162717)
chr5 (74-119)||(39939033-39939078)
chr5 (71-119)||(40109891-40109939)
chr5 (72-119)||(6260378-6260424)
chr5 (74-116)||(5140672-5140714)
chr5 (73-119)||(9499762-9499808)
chr5 (77-119)||(23690501-23690543)
chr5 (74-119)||(2852060-2852104)
chr5 (74-119)||(7080472-7080517)
chr5 (74-119)||(19239155-19239200)
chr5 (74-119)||(32455656-32455700)
chr5 (66-118)||(702304-702355)
chr5 (83-119)||(28205143-28205179)
chr5 (74-118)||(28318348-28318391)
chr5 (71-119)||(36427905-36427952)
chr5 (66-118)||(39816506-39816557)
chr5 (83-119)||(39979714-39979750)
chr5 (66-118)||(40563116-40563167)
[»] scaffold0721 (1 HSPs)
scaffold0721 (74-119)||(6585-6631)
[»] scaffold0067 (1 HSPs)
scaffold0067 (74-113)||(41751-41790)
[»] scaffold0271 (1 HSPs)
scaffold0271 (74-119)||(17022-17067)
[»] scaffold0009 (1 HSPs)
scaffold0009 (74-119)||(214501-214546)


Alignment Details
Target: chr3 (Bit Score: 138; Significance: 3e-72; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 35375564 - 35375407
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttcccgtagaattttacctaacttttccatattgttttcatatatactctc 165  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  35375564 tgaatcaagagtaccgatacacctcaatttgtgaggtgtaccgtagaagttcccatagaatttcacctaacttttccatattgttttcatatatactctc 35375465  T
Q  166 agttatgcgttcttttactccggttcatcttatagcttcttcatgctacgtcgttatt 223  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35375464 aattatgcgttcttttactccggttcatcttatagcttcttcatgctacgtcgttatt 35375407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 43903434 - 43903479
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||    
T  43903434 gagtaccgatacacctcaatttgtgaggtgtaccgtagaagttccc 43903479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 119
Target Start/End: Complemental strand, 48795486 - 48795439
Alignment:
Q  72 aagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  48795486 aagagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 48795439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 5335416 - 5335366
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagtt 116  Q
    |||| |||||||| || ||||||||||||| ||||||||||||||||||||    
T  5335416 tgaagcaagagtatcggtacacctcaatttgtgagatgtaccgtagaagtt 5335366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 14998193 - 14998147
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||||    
T  14998193 agagtaccgatacaccacaatttgtgaggtgtaccgtagaagttccc 14998147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 29698367 - 29698321
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttcccg 120  Q
    |||||||| ||||||||||||| |||| |||||||||||||||||||    
T  29698367 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttcccg 29698321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 9252207 - 9252259
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||| ||||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  9252207 tgaagcaagagtaccggtacacctcaatttacgag-tgtaccgtagaagttccc 9252259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 115
Target Start/End: Complemental strand, 52776494 - 52776453
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagt 115  Q
    |||||||| |||||||||||||||||| ||||||||||||||    
T  52776494 gagtaccggtacacctcaatttatgaggtgtaccgtagaagt 52776453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 116
Target Start/End: Original strand, 47175829 - 47175872
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagtt 116  Q
    |||||| || |||||||||||||||||| |||||||||||||||    
T  47175829 agagtatcggtacacctcaatttatgaggtgtaccgtagaagtt 47175872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 119
Target Start/End: Complemental strand, 37626980 - 37626938
Alignment:
Q  77 taccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||| ||| ||||||||||||| |||||||||||||||||||    
T  37626980 taccggtacgcctcaatttatgaaatgtaccgtagaagttccc 37626938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 8966293 - 8966337
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||    
T  8966293 gagtaccggtacaccttaatttatgag-tgtaccgtagaagttccc 8966337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 32121944 - 32121899
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||||| ||| |||| ||||||||||||||||||    
T  32121944 gagtaccggtacacctcactttgtgaggtgtaccgtagaagttccc 32121899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 35748974 - 35748922
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||| |||||||||||||||||||| ||||| ||| |||| |||||||||||||    
T  35748974 tgaagcaagagtaccgatacacctctatttacgag-tgtatcgtagaagttccc 35748922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 41982345 - 41982389
Alignment:
Q  72 aagagtaccgatacacctcaatttatgagatgtaccgtagaagttc 117  Q
    |||||||||||||||||||| ||| |||| ||||||||||||||||    
T  41982345 aagagtaccgatacacctcactttgtgag-tgtaccgtagaagttc 41982389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 52058559 - 52058514
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| |||||| |||||| |||| ||||||||||||||||||    
T  52058559 gagtaccggtacaccccaatttgtgaggtgtaccgtagaagttccc 52058514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 115
Target Start/End: Original strand, 4393517 - 4393549
Alignment:
Q  83 tacacctcaatttatgagatgtaccgtagaagt 115  Q
    |||||||||||||||||| ||||||||||||||    
T  4393517 tacacctcaatttatgaggtgtaccgtagaagt 4393549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 29806368 - 29806415
Alignment:
Q  71 caagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||||| |||||||||||||  ||| ||||||||||||||||||    
T  29806368 caagagtaccggtacacctcaatttgcgag-tgtaccgtagaagttccc 29806415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 29815499 - 29815535
Alignment:
Q  83 tacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  29815499 tacacctcaatttgtgaggtgtaccgtagaagttccc 29815535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 41982435 - 41982391
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttcc 118  Q
    |||||||| |||||| |||||| |||| |||||||||||||||||    
T  41982435 gagtaccggtacaccccaatttgtgaggtgtaccgtagaagttcc 41982391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 46507406 - 46507363
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagttc 117  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||||    
T  46507406 agagtaccgatacacctcattttgtgag-tgtaccgtagaagttc 46507363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 9e-17; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 2859407 - 2859359
Alignment:
Q  71 caagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2859407 caagagtaccggtacacctcaatttatgagatgtaccgtagaagttccc 2859359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 5615743 - 5615790
Alignment:
Q  72 aagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  5615743 aagagtaccgatacacctcaatttatgaggtgtatcgtagaagttccc 5615790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 118
Target Start/End: Original strand, 12002707 - 12002750
Alignment:
Q  75 agtaccgatacacctcaatttatgagatgtaccgtagaagttcc 118  Q
    ||||||||||||||||||||| |||| |||||||||||||||||    
T  12002707 agtaccgatacacctcaatttgtgaggtgtaccgtagaagttcc 12002750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 121
Target Start/End: Original strand, 25740340 - 25740395
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttcccgt 121  Q
    |||| |||||||| || |||||||||||||||||| | ||||||||||||||||||    
T  25740340 tgaaacaagagtatcggtacacctcaatttatgaggtataccgtagaagttcccgt 25740395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 119
Target Start/End: Complemental strand, 38073153 - 38073106
Alignment:
Q  72 aagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  38073153 aagagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 38073106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 45690545 - 45690499
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  45690545 agagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 45690499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 8333936 - 8333891
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||    
T  8333936 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 8333891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 15362514 - 15362469
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||||||||||| || ||||||||||||||||||    
T  15362514 gagtaccggtacacctcaatttataaggtgtaccgtagaagttccc 15362469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 41555476 - 41555431
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||    
T  41555476 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 41555431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 40287754 - 40287706
Alignment:
Q  71 caagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||||||||||||||||| |||||  |||||||||||    
T  40287754 caagagtatcgatacacctcaatttatgaggtgtacaatagaagttccc 40287706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 11088585 - 11088632
Alignment:
Q  72 aagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| | ||||||||||||| |||| ||||||||||||||||||    
T  11088585 aagagtactggtacacctcaatttgtgaggtgtaccgtagaagttccc 11088632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 115
Target Start/End: Complemental strand, 8362446 - 8362405
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagt 115  Q
    |||||||  |||||||||||||||||| ||||||||||||||    
T  8362446 gagtaccagtacacctcaatttatgaggtgtaccgtagaagt 8362405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 12071515 - 12071556
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagt 115  Q
    |||||||| |||||||||||||||||| |||| |||||||||    
T  12071515 gagtaccggtacacctcaatttatgaggtgtaacgtagaagt 12071556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 34188896 - 34188941
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||||||||| | || ||||||||||||||||||    
T  34188896 gagtaccggtacacctcaatttgtaaggtgtaccgtagaagttccc 34188941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 40810780 - 40810825
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||||||||| | | |||||||||||||||||||    
T  40810780 gagtaccggtacacctcaatttgtaaaatgtaccgtagaagttccc 40810825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Complemental strand, 37781902 - 37781866
Alignment:
Q  83 tacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  37781902 tacacctcaatttgtgaggtgtaccgtagaagttccc 37781866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 38617775 - 38617728
Alignment:
Q  71 caagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||||| |||||||||||||| ||| |||||||| |||||||||    
T  38617775 caagagtaccggtacacctcaatttacgag-tgtaccgttgaagttccc 38617728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 32887711 - 32887666
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  32887711 gagtaccggtacacctcaatttatgagatgtaccgtagaagttccc 32887666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 6804061 - 6804009
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttcc 118  Q
    |||||||||||||||| |||||||||||||||||| |||||| |||| |||||    
T  6804061 tgaatcaagagtaccggtacacctcaatttatgaggtgtaccatagatgttcc 6804009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 12107529 - 12107490
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaa 113  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  12107529 gagtaccggtacacctcaatttatgagatgtaccgtagaa 12107490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 113
Target Start/End: Complemental strand, 35754504 - 35754465
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaa 113  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  35754504 gagtaccgatacaccttaatttatgagatgtaccgtagaa 35754465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 34057875 - 34057829
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||| ||||||||||||||||||||| ||||||||||||| ||||    
T  34057875 agagtatcgatacacctcaatttatgaggtgtaccgtagaagctccc 34057829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 12801466 - 12801507
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaag 114  Q
    ||||||||| |||||||||||||||||| |||||||||||||    
T  12801466 agagtaccggtacacctcaatttatgaggtgtaccgtagaag 12801507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 38764783 - 38764738
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||||||||| | || ||||||||||||||||||    
T  38764783 gagtaccgatacacctcaatttgtaaggtgtaccgtagaagttccc 38764738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 463882 - 463838
Alignment:
Q  72 aagagtaccgatacacctcaatttatgagatgtaccgtagaagtt 116  Q
    ||||||||||||||||||||||||||||  ||||||||| |||||    
T  463882 aagagtaccgatacacctcaatttatgaagtgtaccgtaaaagtt 463838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 2666866 - 2666909
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttc 117  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||    
T  2666866 gagtatcgatacatctcaatttatgaggtgtaccgtagaagttc 2666909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 30777317 - 30777274
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttc 117  Q
    ||||| || |||||||||||||||||| ||||||||||||||||    
T  30777317 gagtatcggtacacctcaatttatgaggtgtaccgtagaagttc 30777274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 34520932 - 34520975
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttc 117  Q
    ||||| |||||||||||||||| |||| ||||||||||||||||    
T  34520932 gagtatcgatacacctcaatttgtgaggtgtaccgtagaagttc 34520975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 6631467 - 6631516
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagtt 116  Q
    |||| |||||||||||||||||||||||||| ||| ||||||||| |||||    
T  6631467 tgaagcaagagtaccgatacacctcaatttacgag-tgtaccgtataagtt 6631516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 41674845 - 41674891
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||| |||||||||| ||||| |||||||||||||||||| ||||    
T  41674845 agagtatcgatacaccttaatttgtgagatgtaccgtagaagctccc 41674891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 2879977 - 2879936
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaag 114  Q
    |||||| || |||||||||||||||||| |||||||||||||    
T  2879977 agagtatcggtacacctcaatttatgaggtgtaccgtagaag 2879936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 12632949 - 12632904
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||| || ||||||||||||| |||| ||||||||||||||||||    
T  12632949 gagtatcggtacacctcaatttgtgaggtgtaccgtagaagttccc 12632904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 17792566 - 17792610
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||| |||||||||| |||||| |||||||||||    
T  17792566 gagtaccgatacaccttaatttatgag-tgtaccatagaagttccc 17792610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 23870313 - 23870268
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| |||||| |||||| |||| ||||||||||||||||||    
T  23870313 gagtaccggtacaccccaatttgtgaggtgtaccgtagaagttccc 23870268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 26439553 - 26439509
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||| ||||| || ||||||||||||||||||||    
T  26439553 gagtaccgatacaccttaatttgtg-gatgtaccgtagaagttccc 26439509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 118
Target Start/End: Original strand, 28886042 - 28886087
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagttcc 118  Q
    |||||| || ||||||||||||| |||| |||||||||||||||||    
T  28886042 agagtatcggtacacctcaatttgtgaggtgtaccgtagaagttcc 28886087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 36672062 - 36672010
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||| ||||||||||| |||||||||||||| ||| |||||| |||||||||||    
T  36672062 tgaagcaagagtaccggtacacctcaatttacgag-tgtaccatagaagttccc 36672010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 116
Target Start/End: Original strand, 39722325 - 39722358
Alignment:
Q  83 tacacctcaatttatgagatgtaccgtagaagtt 116  Q
    |||||||||||||||||| |||||||||||||||    
T  39722325 tacacctcaatttatgaggtgtaccgtagaagtt 39722358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 5273420 - 5273456
Alignment:
Q  83 tacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  5273420 tacacctcaatttatgaggtgtaccgtagaagctccc 5273456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 31158913 - 31158960
Alignment:
Q  71 caagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||| |||||||||||||||  ||| ||||||||||||||||||    
T  31158913 caagagtactgatacacctcaatttgcgag-tgtaccgtagaagttccc 31158960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 15060916 - 15060961
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  15060916 gagtaccgatgcacctcaatttatgagatgtaccgtagaagttccc 15060961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 4491217 - 4491262
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||    
T  4491217 gagtaccggtacacctcaatttatgaggtgtaccgtagaagttccc 4491262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 126940 - 126987
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttcccgta 122  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||    
T  126940 gagtaccgatacacctcattttatgag-tgtaccgtagaagttcccgta 126987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 19527085 - 19527133
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttcccgta 122  Q
    |||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  19527085 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttcccgta 19527133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 32570727 - 32570774
Alignment:
Q  72 aagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  32570727 aagagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 32570774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 27950304 - 27950258
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  27950304 agagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 27950258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 31999079 - 31999128
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagtt 116  Q
    |||| ||||||||||||||||||||| |||||||| |||||||||||||||    
T  31999079 tgaagcaagagtaccgatacacctcactttatgag-tgtaccgtagaagtt 31999128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 34927147 - 34927102
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||| ||||||||||||||| |||| ||||||||||||||||||    
T  34927147 gagtactgatacacctcaatttgtgaggtgtaccgtagaagttccc 34927102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 46663680 - 46663732
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||| ||||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  46663680 tgaagcaagagtaccggtacacctcaatttacgag-tgtaccgtagaagttccc 46663732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 119
Target Start/End: Original strand, 3690880 - 3690919
Alignment:
Q  80 cgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  3690880 cgatacacctcaatttgtgaggtgtaccgtagaagttccc 3690919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 39103582 - 39103539
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttc 117  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||    
T  39103582 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttc 39103539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 119
Target Start/End: Complemental strand, 42177388 - 42177342
Alignment:
Q  72 aagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||||||| ||| |||| ||||||||||||||||||    
T  42177388 aagagtaccgatacacctcattttgtgag-tgtaccgtagaagttccc 42177342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 53936554 - 53936508
Alignment:
Q  71 caagagtaccgatacacctcaatttatgagatgtaccgtagaagttcc 118  Q
    |||||||||||||||||||||  ||||||| |||||||||||||||||    
T  53936554 caagagtaccgatacacctcatcttatgag-tgtaccgtagaagttcc 53936508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 408417 - 408466
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagtt 116  Q
    |||| ||||||||||| |||||||||||||| ||| |||||||||||||||    
T  408417 tgaagcaagagtaccggtacacctcaatttacgag-tgtaccgtagaagtt 408466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 115
Target Start/End: Complemental strand, 25607736 - 25607694
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagt 115  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||    
T  25607736 agagtaccggtacacctcaatttgtgaggtgtaccgtagaagt 25607694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 595341 - 595296
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||||||||| |||| |||||||||||| |||||    
T  595341 gagtaccggtacacctcaatttgtgaggtgtaccgtagaaattccc 595296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 4695669 - 4695714
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| | |||||||||||||||| |||||| |||||||||||    
T  4695669 gagtaccggtgcacctcaatttatgaggtgtaccctagaagttccc 4695714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 4720833 - 4720877
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||||| |||||||| ||||||||| ||||||||    
T  4720833 gagtaccgatacacctcattttatgag-tgtaccgtataagttccc 4720877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 118
Target Start/End: Original strand, 12756367 - 12756408
Alignment:
Q  77 taccgatacacctcaatttatgagatgtaccgtagaagttcc 118  Q
    ||||| ||||||||||||| |||| |||||||||||||||||    
T  12756367 taccggtacacctcaatttgtgaggtgtaccgtagaagttcc 12756408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 22789627 - 22789582
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| |||||| |||||| |||| ||||||||||||||||||    
T  22789627 gagtaccggtacaccccaatttgtgaggtgtaccgtagaagttccc 22789582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 25684139 - 25684098
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaag 114  Q
    |||||| ||||||| ||||||||||||| |||||||||||||    
T  25684139 agagtatcgatacatctcaatttatgaggtgtaccgtagaag 25684098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 27761452 - 27761400
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||| ||||||||||||||||||||| ||| |||| |||||||||||| |||||    
T  27761452 tgaagcaagagtaccgatacacctcactttgtgag-tgtaccgtagaaattccc 27761400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 30060582 - 30060530
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||| |||||||| || |||||||||||||| ||| ||||||||||||||||||    
T  30060582 tgaagcaagagtatcggtacacctcaatttacgag-tgtaccgtagaagttccc 30060530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 31975911 - 31975956
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||||| |||||||||| |||| | ||||||||||||||||    
T  31975911 gagtaccgatagacctcaatttgtgaggtctaccgtagaagttccc 31975956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 34584227 - 34584182
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||| || ||||||||||||| |||| ||||||||||||||||||    
T  34584227 gagtatcggtacacctcaatttgtgaggtgtaccgtagaagttccc 34584182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 49286733 - 49286688
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||||||||| |||| ||||||||||||| ||||    
T  49286733 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagctccc 49286688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 18051810 - 18051778
Alignment:
Q  83 tacacctcaatttatgagatgtaccgtagaagt 115  Q
    |||||||||||||||||| ||||||||||||||    
T  18051810 tacacctcaatttatgaggtgtaccgtagaagt 18051778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 24566415 - 24566367
Alignment:
Q  71 caagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||||| ||||||||| ||| | || ||||||||||||||||||    
T  24566415 caagagtaccggtacacctcattttgttaggtgtaccgtagaagttccc 24566367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 29582329 - 29582372
Alignment:
Q  75 agtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||||    
T  29582329 agtaccggtacacctcaatttgtgag-tgtaccgtagaagttccc 29582372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 38961013 - 38960969
Alignment:
Q  71 caagagtaccgatacacctcaatttatgagatgtaccgtagaagt 115  Q
    |||||||| ||||||||||||||||||||| |||||  |||||||    
T  38961013 caagagtatcgatacacctcaatttatgaggtgtacaatagaagt 38960969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 50776135 - 50776178
Alignment:
Q  75 agtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||||||||||| ||||| || ||||||||||||||||||    
T  50776135 agtaccgatacacctcattttataag-tgtaccgtagaagttccc 50776178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 38207573 - 38207529
Alignment:
Q  75 agtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  38207573 agtaccgatacacctcaatttatgaggtgtaccgtagaagttccc 38207529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 7435875 - 7435920
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||    
T  7435875 gagtaccgatacacctcaatttgtgaggtgtaccgtagaagttccc 7435920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 25702487 - 25702435
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  25702487 tgaagcaagagtaccggtacacctcaatttatgag-tgtaccgtagaagttccc 25702435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 51610588 - 51610536
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||||||    
T  51610588 tgaagcaagagtaccgatacacctcaatttacga-atgtaccgtagaagttccc 51610536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 23539990 - 23539942
Alignment:
Q  71 caagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  23539990 caagagtaccggtacacctcaatttctgaggtgtaccgtagaagttccc 23539942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 72 - 119
Target Start/End: Complemental strand, 17644437 - 17644390
Alignment:
Q  72 aagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  17644437 aagagtaccgatacatctcaatttgtgagatgtaccgtagaaattccc 17644390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 32912257 - 32912211
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||||    
T  32912257 agagtaccgatacacctcaatttgtgaggtgtactgtagaagttccc 32912211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 40054949 - 40054994
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||    
T  40054949 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 40054994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 43916391 - 43916346
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||    
T  43916391 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 43916346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 44808766 - 44808811
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||| || ||||||||||||| |||||||||||||||||||||||    
T  44808766 gagtatcggtacacctcaatttgtgagatgtaccgtagaagttccc 44808811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 49982501 - 49982456
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||| || |||||||||||||||||| ||||||||||||||||||    
T  49982501 gagtatcggtacacctcaatttatgaggtgtaccgtagaagttccc 49982456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 26423886 - 26423838
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttcccgta 122  Q
    |||||||| ||||||| |||||||||| |||||||||||||| ||||||    
T  26423886 gagtaccggtacaccttaatttatgaggtgtaccgtagaagtccccgta 26423838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 51787511 - 51787464
Alignment:
Q  71 caagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  51787511 caagagtaccgatacacctcatcttatgag-tgtaccgtagaagttccc 51787464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 113
Target Start/End: Original strand, 10574700 - 10574735
Alignment:
Q  78 accgatacacctcaatttatgagatgtaccgtagaa 113  Q
    ||||||||||||||||||||||| ||||||||||||    
T  10574700 accgatacacctcaatttatgaggtgtaccgtagaa 10574735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 121
Target Start/End: Complemental strand, 36735557 - 36735510
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttcccgt 121  Q
    |||||||| |||||  ||||||||||| ||||||||||||||||||||    
T  36735557 gagtaccggtacactccaatttatgaggtgtaccgtagaagttcccgt 36735510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 39084756 - 39084710
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||| |||||||||||||||| |||| ||||||||||||| ||||    
T  39084756 agagtatcgatacacctcaatttgtgaggtgtaccgtagaagctccc 39084710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 40868180 - 40868134
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||| || |||||||||||||||||| ||||||||||||| ||||    
T  40868180 agagtatcggtacacctcaatttatgaggtgtaccgtagaagctccc 40868134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 50533950 - 50533904
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||| |||||||||||||||| |||| ||||||||||||| ||||    
T  50533950 agagtatcgatacacctcaatttgtgaggtgtaccgtagaagctccc 50533904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 1845118 - 1845073
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||||||||| |||| || |||||||||||||||    
T  1845118 gagtaccggtacacctcaatttgtgaggtgcaccgtagaagttccc 1845073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 8396711 - 8396755
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||||| |||||||| |||||||||||| |||||    
T  8396711 gagtaccgatacacctcattttatgag-tgtaccgtagaaattccc 8396755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 12105212 - 12105160
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||| ||||||||||| ||||||||| ||| |||| ||||||||||||||||||    
T  12105212 tgaagcaagagtaccggtacacctcattttgtgag-tgtaccgtagaagttccc 12105160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 24511933 - 24511985
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||| ||||||||||| |||||||||||||| ||| |||||||||||| |||||    
T  24511933 tgaagcaagagtaccggtacacctcaatttacgag-tgtaccgtagaaattccc 24511985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 29877747 - 29877702
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||  |||||||||| ||||||||||||||||||    
T  29877747 gagtaccggtacacccaaatttatgaggtgtaccgtagaagttccc 29877702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 38261165 - 38261209
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||||    
T  38261165 gagtaccggtacacctcactttatgag-tgtaccgtagaagttccc 38261209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 51004835 - 51004790
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||||||||| |||| |||||||||||| |||||    
T  51004835 gagtaccggtacacctcaatttgtgaggtgtaccgtagaaattccc 51004790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 52345651 - 52345599
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||| ||||||||||| ||||||||| ||| |||| ||||||||||||||||||    
T  52345651 tgaaacaagagtaccggtacacctcactttgtgag-tgtaccgtagaagttccc 52345599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 17203117 - 17203153
Alignment:
Q  83 tacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  17203117 tacacctcaatttatgaggtgtaccgtagaagctccc 17203153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 29688969 - 29688924
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||    
T  29688969 gagtaccggtacacctcaatttatgaggtgtaccgtagaagttccc 29688924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 21919733 - 21919688
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||    
T  21919733 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 21919688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 27800074 - 27800033
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaag 114  Q
    ||||||||| |||||||||||||||||| |||||||||||||    
T  27800074 agagtaccggtacacctcaatttatgaggtgtaccgtagaag 27800033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 43542138 - 43542183
Alignment:
Q  71 caagagtaccgatacacctcaatttatgagatgtaccgtagaagtt 116  Q
    |||||||| |||| |||||||||||||||| |||||||||||||||    
T  43542138 caagagtatcgatgcacctcaatttatgaggtgtaccgtagaagtt 43542183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 2089221 - 2089268
Alignment:
Q  71 caagagtaccgatacacctcaatttatgagatgtaccgtagaagttcc 118  Q
    ||||||||||| ||||||||| ||||| || |||||||||||||||||    
T  2089221 caagagtaccggtacacctcattttattaggtgtaccgtagaagttcc 2089268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 19345972 - 19346018
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||| || |||||||||||||||||| ||||||||||||| ||||    
T  19345972 agagtatcggtacacctcaatttatgaggtgtaccgtagaagctccc 19346018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 45701077 - 45701031
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||| || |||||||||||||||||| ||||||||||||| ||||    
T  45701077 agagtatcggtacacctcaatttatgaggtgtaccgtagaagctccc 45701031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 5215386 - 5215431
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||||||||| |||  ||||||||||||||||||    
T  5215386 gagtaccggtacacctcaatttgtgatgtgtaccgtagaagttccc 5215431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 26605108 - 26605056
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||| ||||||||||| ||||||||| ||| |||| ||||||||||||||||||    
T  26605108 tgaagcaagagtaccggtacacctcattttgtgag-tgtaccgtagaagttccc 26605056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 31743663 - 31743708
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| |||||| |||||| |||| ||||||||||||||||||    
T  31743663 gagtaccggtacaccacaatttgtgaggtgtaccgtagaagttccc 31743708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 109
Target Start/End: Original strand, 24149127 - 24149163
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgt 109  Q
    |||||| || |||||||||||||||||||||||||||    
T  24149127 agagtatcggtacacctcaatttatgagatgtaccgt 24149163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 38882866 - 38882818
Alignment:
Q  71 caagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||||| ||||||||| ||| | || ||||||||||||||||||    
T  38882866 caagagtaccggtacacctcattttgttaggtgtaccgtagaagttccc 38882818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 41968478 - 41968435
Alignment:
Q  72 aagagtaccgatacacctcaatttatgagatgtaccgtagaagtt 116  Q
    |||||||||||||||||||| ||| |||| |||||||||||||||    
T  41968478 aagagtaccgatacacctcattttgtgag-tgtaccgtagaagtt 41968435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 1705967 - 1706012
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||    
T  1705967 gagtaccggtacacctcaatttatgaggtgtaccgtagaagttccc 1706012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 10887854 - 10887809
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||    
T  10887854 gagtaccggtacacctcaatttatgaggtgtaccgtagaagttccc 10887809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 14507982 - 14508027
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||    
T  14507982 gagtaccggtacacctcaatttatgaggtgtaccgtagaagttccc 14508027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 19474025 - 19474078
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||| ||||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  19474025 tgaagcaagagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 19474078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 31644462 - 31644410
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||| |||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  31644462 tgaagcaagagtaccgatacacctcaatttacgag-tgtaccgtagaagttccc 31644410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 6295738 - 6295784
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||||||||||||||||| |||| ||||||||||||| ||||    
T  6295738 agagtaccgatacacctcaatttgtgaggtgtaccgtagaagctccc 6295784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 6302548 - 6302594
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||||||||||||||||| |||| ||||||||||||| ||||    
T  6302548 agagtaccgatacacctcaatttgtgaggtgtaccgtagaagctccc 6302594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 2994367 - 2994322
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||||    
T  2994367 gagtaccggtacacctcaatttatgaggtgtactgtagaagttccc 2994322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 10965985 - 10966030
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||    
T  10965985 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 10966030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 21294151 - 21294196
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| |||||||||||||||||| |||||||||| |||||||    
T  21294151 gagtaccggtacacctcaatttatgaggtgtaccgtaggagttccc 21294196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 24249167 - 24249212
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||||||||| | || ||||||||||||||||||    
T  24249167 gagtaccgatacacctcaatttgtaaggtgtaccgtagaagttccc 24249212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 29023671 - 29023619
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||| ||||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  29023671 tgaagcaagagtaccggtacacctcaatttacgag-tgtaccgtagaagttccc 29023619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 119
Target Start/End: Original strand, 9662117 - 9662164
Alignment:
Q  71 caagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  9662117 caagagtaccgatacacctcatcttatgag-tgtaccgtagaagttccc 9662164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 14002444 - 14002398
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||| |||||||||||||||| |||| ||||||||||||| ||||    
T  14002444 agagtatcgatacacctcaatttctgaggtgtaccgtagaagctccc 14002398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 24151170 - 24151124
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||| |||||||||||||||| |||| ||||||||||||| ||||    
T  24151170 agagtatcgatacacctcaatttgtgaggtgtaccgtagaagctccc 24151124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 119
Target Start/End: Original strand, 34286732 - 34286770
Alignment:
Q  81 gatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  34286732 gatacacctcaatttgtgagatgtaccgtagaaattccc 34286770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 115
Target Start/End: Complemental strand, 7344366 - 7344325
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagt 115  Q
    |||||||| |||||||||||||||| | ||||||||||||||    
T  7344366 gagtaccggtacacctcaatttatgtggtgtaccgtagaagt 7344325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 33574707 - 33574759
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||| ||||||||||| ||||||||| ||| |||| ||||||||||||||||||    
T  33574707 tgaagcaagagtaccggtacacctcactttgtgag-tgtaccgtagaagttccc 33574759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 33574885 - 33574937
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||| ||||||||||| ||||||||| ||| |||| ||||||||||||||||||    
T  33574885 tgaagcaagagtaccggtacacctcactttgtgag-tgtaccgtagaagttccc 33574937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 117
Target Start/End: Original strand, 16893258 - 16893302
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagttc 117  Q
    ||||||||| ||||||||||||| |||| |||||| |||||||||    
T  16893258 agagtaccggtacacctcaatttgtgaggtgtaccatagaagttc 16893302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 21998974 - 21999014
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaa 113  Q
    |||||| || |||||||||||||||||| ||||||||||||    
T  21998974 agagtatcggtacacctcaatttatgaggtgtaccgtagaa 21999014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 5204662 - 5204617
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||    
T  5204662 gagtaccgatacacctcaatttgtgaggtgtaccgtagaagttccc 5204617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 40756586 - 40756541
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||    
T  40756586 gagtaccgatacacctcaatttgtgaggtgtaccgtagaagttccc 40756541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 4039516 - 4039466
Alignment:
Q  72 aagagtaccgatacacctcaatttatgagatgtaccgtagaagttcccgta 122  Q
    |||||||||| ||||||| ||||| |||| |||||||||||||||||||||    
T  4039516 aagagtaccggtacaccttaatttgtgaggtgtaccgtagaagttcccgta 4039466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 4429781 - 4429826
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||| |||||||||||||| |||| ||||||||||||||||||    
T  4429781 gagtaccaatacacctcaatttgtgaggtgtaccgtagaagttccc 4429826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 5512727 - 5512682
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||    
T  5512727 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 5512682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 31588588 - 31588641
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||| ||| ||||||| ||||||||||||| |||| ||||||||||||||||||    
T  31588588 tgaaacaaaagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 31588641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 34901702 - 34901657
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| |||||| ||||||||||| ||||||||||||||||||    
T  34901702 gagtaccggtacaccccaatttatgaggtgtaccgtagaagttccc 34901657  T

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Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 35162664 - 35162717
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||| |||||||||| |||||||| |||||||||| |||| |||||||||||||    
T  35162664 tgaagcaagagtaccaatacaccttaatttatgaggtgtaacgtagaagttccc 35162717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 39939078 - 39939033
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||    
T  39939078 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 39939033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 40109939 - 40109891
Alignment:
Q  71 caagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||||| |||||||| || |||||||||||| |||||    
T  40109939 caagagtaccgatacaccccaatttataaggtgtaccgtagaaattccc 40109891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 6260378 - 6260424
Alignment:
Q  72 aagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  6260378 aagagtaccggtacacctcattttatgag-tgtaccgtagaagttccc 6260424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 116
Target Start/End: Complemental strand, 5140714 - 5140672
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagtt 116  Q
    |||||||| ||||||||||||| |||| |||||||||||||||    
T  5140714 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagtt 5140672  T

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Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 9499762 - 9499808
Alignment:
Q  73 agagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||| || |||||||||||||||||| ||||||||||||| ||||    
T  9499762 agagtatcggtacacctcaatttatgaggtgtaccgtagaagctccc 9499808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 119
Target Start/End: Complemental strand, 23690543 - 23690501
Alignment:
Q  77 taccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||    
T  23690543 taccggtacacctcaatttttgaggtgtaccgtagaagttccc 23690501  T

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Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 2852060 - 2852104
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||||| ||| |||| ||||||||||||||||||    
T  2852060 gagtaccgatacacctcattttgtgag-tgtaccgtagaagttccc 2852104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 7080472 - 7080517
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| |||||| |||||| |||| ||||||||||||||||||    
T  7080472 gagtaccggtacaccccaatttgtgaggtgtaccgtagaagttccc 7080517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 19239155 - 19239200
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||| ||||||||||||||||||||| |||||| |||||| ||||    
T  19239155 gagtatcgatacacctcaatttatgaggtgtaccatagaagctccc 19239200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 32455656 - 32455700
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||||||||||| |||||||||| |||||| |||||||||||    
T  32455656 gagtaccgatacaccttaatttatgag-tgtaccatagaagttccc 32455700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 702304 - 702355
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttcc 118  Q
    |||| ||||||||||| ||||||||| ||| |||| |||||||||||||||||    
T  702304 tgaagcaagagtaccggtacacctcattttgtgag-tgtaccgtagaagttcc 702355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 28205143 - 28205179
Alignment:
Q  83 tacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  28205143 tacacctcaatttgtgagatgtaccgttgaagttccc 28205179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 28318391 - 28318348
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttcc 118  Q
    |||||||||||||||||| ||||| || |||||||||||||||||    
T  28318391 gagtaccgatacacctcattttataag-tgtaccgtagaagttcc 28318348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 36427952 - 36427905
Alignment:
Q  71 caagagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||||| ||||||||| ||| |||| ||||||||||||||||||    
T  36427952 caagagtaccggtacacctcactttgtgag-tgtaccgtagaagttccc 36427905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 39816557 - 39816506
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttcc 118  Q
    |||| ||||||||||| ||||||||| ||| |||| |||||||||||||||||    
T  39816557 tgaagcaagagtaccggtacacctcactttgtgag-tgtaccgtagaagttcc 39816506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 119
Target Start/End: Original strand, 39979714 - 39979750
Alignment:
Q  83 tacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  39979714 tacacctcaatttgtgaggtgtaccgtagaagttccc 39979750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 40563167 - 40563116
Alignment:
Q  66 tgaatcaagagtaccgatacacctcaatttatgagatgtaccgtagaagttcc 118  Q
    |||| |||||||| || ||||||||| |||||||| |||||||||||||||||    
T  40563167 tgaagcaagagtatcggtacacctcattttatgag-tgtaccgtagaagttcc 40563116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0721 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0721
Description:

Target: scaffold0721; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 6631 - 6585
Alignment:
Q  74 gagtaccgatacacctcaattt-atgagatgtaccgtagaagttccc 119  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||    
T  6631 gagtaccgatgcacctcaattttatgagatgtaccgtagaagttccc 6585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 41751 - 41790
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaa 113  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  41751 gagtatcgatacacctcaatttatgaggtgtaccgtagaa 41790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0271 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0271
Description:

Target: scaffold0271; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 17022 - 17067
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    ||||| || ||||||||||||| |||| ||||||||||||||||||    
T  17022 gagtatcggtacacctcaatttgtgaggtgtaccgtagaagttccc 17067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 119
Target Start/End: Original strand, 214501 - 214546
Alignment:
Q  74 gagtaccgatacacctcaatttatgagatgtaccgtagaagttccc 119  Q
    |||||||| ||||  |||||||||||| ||||||||||||||||||    
T  214501 gagtaccggtacaattcaatttatgaggtgtaccgtagaagttccc 214546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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