View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10474_low_10 (Length: 272)

Name: NF10474_low_10
Description: NF10474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10474_low_10
NF10474_low_10
[»] chr7 (28 HSPs)
chr7 (132-261)||(21992552-21992681)
chr7 (129-257)||(21628502-21628630)
chr7 (122-261)||(21785776-21785915)
chr7 (122-261)||(21682020-21682159)
chr7 (122-261)||(21788599-21788735)
chr7 (155-258)||(15713990-15714093)
chr7 (122-261)||(21772331-21772470)
chr7 (141-263)||(21623561-21623683)
chr7 (160-261)||(21764414-21764515)
chr7 (122-257)||(21689787-21689922)
chr7 (122-263)||(21647115-21647256)
chr7 (124-261)||(21726266-21726403)
chr7 (122-261)||(21714553-21714692)
chr7 (163-257)||(21664481-21664575)
chr7 (123-257)||(21807802-21807936)
chr7 (163-262)||(21705006-21705105)
chr7 (124-231)||(21792390-21792497)
chr7 (140-261)||(21745896-21746017)
chr7 (155-230)||(21652461-21652536)
chr7 (17-96)||(21786055-21786134)
chr7 (17-87)||(21788782-21788852)
chr7 (132-187)||(21656895-21656950)
chr7 (35-97)||(15714163-15714225)
chr7 (20-62)||(21746077-21746119)
chr7 (21-63)||(21792549-21792591)
chr7 (18-62)||(21764601-21764648)
chr7 (18-54)||(21705199-21705235)
chr7 (17-97)||(21714729-21714809)
[»] scaffold0182 (2 HSPs)
scaffold0182 (124-261)||(25743-25880)
scaffold0182 (35-97)||(25904-25966)


Alignment Details
Target: chr7 (Bit Score: 90; Significance: 1e-43; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 21992681 - 21992552
Alignment:
Q  132 tcatgctttttatcaattcagcgtcgttgttatctttccacaatagcttgagtactgcgtaaggaagttgattctccaacaaaaccacatccatcatcac 231  Q
    ||||||||||||||||||||   || |||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||    
T  21992681 tcatgctttttatcaattcactctcattgttatctttccacaatagcttgagtactacgtaaggaagttgattctccaacagaagcacatccatcatcac 21992582  T
Q  232 tagaaccagttgatcaaacttaatattcat 261  Q
     ||||||||||||||||  |||||||||||    
T  21992581 aagaaccagttgatcaactttaatattcat 21992552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 129 - 257
Target Start/End: Complemental strand, 21628630 - 21628502
Alignment:
Q  129 tcgtcatgctttttatcaattcagcgtcgttgttatctttccacaatagcttgagtactgcgtaaggaagttgattctccaacaaaaccacatccatcat 228  Q
    ||||||||| |||||||||||||   || |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||    
T  21628630 tcgtcatgcattttatcaattcattctcattgttatctttccacaatagcttgagtacttcataaggaagttgattctccaacaaaagcacatccatcat 21628531  T
Q  229 cactagaaccagttgatcaaacttaatat 257  Q
    ||| |||||||||||||||| ||||||||    
T  21628530 cacaagaaccagttgatcaagcttaatat 21628502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 122 - 261
Target Start/End: Complemental strand, 21785915 - 21785776
Alignment:
Q  122 aggaaattcgtcatgctttttatcaattcagcgtcgttgttatctttccacaatagcttgagtactgcgtaaggaagttgattctccaacaaaaccacat 221  Q
    ||||||||| ||||||||||||||||||||   |||| | |||||||||||||||| ||||| ||| | ||||||||||||||||||||||||| |||||    
T  21785915 aggaaattcttcatgctttttatcaattcactctcgtcgctatctttccacaatagtttgaggacttcataaggaagttgattctccaacaaaagcacat 21785816  T
Q  222 ccatcatcactagaaccagttgatcaaacttaatattcat 261  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  21785815 ccatcatcacaagaaccagttgatcaaccttaatattcat 21785776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 122 - 261
Target Start/End: Complemental strand, 21682159 - 21682020
Alignment:
Q  122 aggaaattcgtcatgctttttatcaattcagcgtcgttgttatctttccacaatagcttgagtactgcgtaaggaagttgattctccaacaaaaccacat 221  Q
    ||||||||||||||  ||||||||||||||   || ||| ||||||||||||||||||||||||||   ||||||||||||||||||||||||| |||||    
T  21682159 aggaaattcgtcataatttttatcaattcactctcattgctatctttccacaatagcttgagtacttgataaggaagttgattctccaacaaaagcacat 21682060  T
Q  222 ccatcatcactagaaccagttgatcaaacttaatattcat 261  Q
    |||||||||| |||||||||||||||| ||||| ||||||    
T  21682059 ccatcatcacaagaaccagttgatcaaccttaacattcat 21682020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 122 - 261
Target Start/End: Complemental strand, 21788735 - 21788599
Alignment:
Q  122 aggaaattcgtcatgctttttatcaattcagcgtcgttgttatctttccacaatagcttgagtactgcgtaaggaagttgattctccaacaaaaccacat 221  Q
    |||||| || ||||||||||||||||||||   ||   |||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||    
T  21788735 aggaaagtcatcatgctttttatcaattcactatc---gttatctttccacaatagcttgagtactacgtaaggaagttgattctccaacagaagcacat 21788639  T
Q  222 ccatcatcactagaaccagttgatcaaacttaatattcat 261  Q
    |||||||||| ||||||||||||||||  |||||||||||    
T  21788638 ccatcatcacaagaaccagttgatcaactttaatattcat 21788599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 15714093 - 15713990
Alignment:
Q  155 tcgttgttatctttccacaatagcttgagtactgcgtaaggaagttgattctccaacaaaaccacatccatcatcactagaaccagttgatcaaacttaa 254  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||| ||||| ||| |||||||||||| |||||    
T  15714093 tcgttgttatctttccacaatagcttgagtacttcataaggaagttgattctccaacaaaagcacatccattatcacaagatccagttgatcaagcttaa 15713994  T
Q  255 tatt 258  Q
    ||||    
T  15713993 tatt 15713990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 122 - 261
Target Start/End: Complemental strand, 21772470 - 21772331
Alignment:
Q  122 aggaaattcgtcatgctttttatcaattcagcgtcgttgttatctttccacaatagcttgagtactgcgtaaggaagttgattctccaacaaaaccacat 221  Q
    ||||||||| ||||||||| ||||||  ||   ||||  | |||||||||||||||||||||||||   ||||||||||||||||||||||||| |||||    
T  21772470 aggaaattcatcatgctttctatcaagccactctcgtcttcatctttccacaatagcttgagtacttgataaggaagttgattctccaacaaaagcacat 21772371  T
Q  222 ccatcatcactagaaccagttgatcaaacttaatattcat 261  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  21772370 ccatcatcacaagaaccagttgatcaaccttaatattcat 21772331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 141 - 263
Target Start/End: Complemental strand, 21623683 - 21623561
Alignment:
Q  141 ttatcaattcagcgtcgttgttatctttccacaatagcttgagtactgcgtaaggaagttgattctccaacaaaaccacatccatcatcactagaaccag 240  Q
    |||||||||||   ||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||| |||||||| |||  | |    
T  21623683 ttatcaattcattctcgttgttatctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaaccacatcaatcatcacaagattccg 21623584  T
Q  241 ttgatcaaacttaatattcatct 263  Q
    |||||||| ||||||||||||||    
T  21623583 ttgatcaagcttaatattcatct 21623561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 21764515 - 21764414
Alignment:
Q  160 gttatctttccacaatagcttgagtactgcgtaaggaagttgattctccaacaaaaccacatccatcatcactagaaccagttgatcaaacttaatattc 259  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||| |||||| |||    
T  21764515 gttatttttccacaatagcttgagtacttcgtaaggaagttgattctccaacaaaagcacatccatcatcacaagaaccagttgaccaaccttaatcttc 21764416  T
Q  260 at 261  Q
    ||    
T  21764415 at 21764414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 122 - 257
Target Start/End: Complemental strand, 21689922 - 21689787
Alignment:
Q  122 aggaaattcgtcatgctttttatcaattcagcgtcgttgttatctttccacaatagcttgagtactgcgtaaggaagttgattctccaacaaaaccacat 221  Q
    |||||||||||| |||||||||||||||||   | ||||||||||||||||||||||| ||||||| | ||||||||||||||||| ||||||| |||||    
T  21689922 aggaaattcgtcgtgctttttatcaattcactcttgttgttatctttccacaatagctcgagtacttcataaggaagttgattctctaacaaaagcacat 21689823  T
Q  222 ccatcatcactagaaccagttgatcaaacttaatat 257  Q
    ||| |||||| | | | |||||||||| ||||||||    
T  21689822 ccaccatcacaatagctagttgatcaaccttaatat 21689787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 122 - 263
Target Start/End: Complemental strand, 21647256 - 21647115
Alignment:
Q  122 aggaaattcgtcatgctttttatcaattcagcgtcgttgttatctttccacaatagcttgagtactgcgtaaggaagttgattctccaacaaaaccacat 221  Q
    ||||||||  ||||| | ||||||||||||   || |||||||||||| | ||||| |||||||||  |||||| ||||||||||||||||||| |||||    
T  21647256 aggaaatttttcatggtatttatcaattcattctcattgttatctttcaataatagtttgagtactatgtaagggagttgattctccaacaaaagcacat 21647157  T
Q  222 ccatcatcactagaaccagttgatcaaacttaatattcatct 263  Q
    |||||||||| |||||||||| ||||| ||||||||||||||    
T  21647156 ccatcatcacaagaaccagtttatcaaccttaatattcatct 21647115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 124 - 261
Target Start/End: Complemental strand, 21726403 - 21726266
Alignment:
Q  124 gaaattcgtcatgctttttatcaattcagcgtcgttgttatctttccacaatagcttgagtactgcgtaaggaagttgattctccaacaaaaccacatcc 223  Q
    ||||||| ||||||||| ||||||| ||   ||||  | |||| ||||||||||||||||||||   ||||||||||||||||||||||||| |||||||    
T  21726403 gaaattcatcatgctttctatcaatccactctcgtcttcatctgtccacaatagcttgagtacttgataaggaagttgattctccaacaaaagcacatcc 21726304  T
Q  224 atcatcactagaaccagttgatcaaacttaatattcat 261  Q
    |||||||| |||||||||||||||| | ||||||||||    
T  21726303 atcatcacaagaaccagttgatcaaccctaatattcat 21726266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 122 - 261
Target Start/End: Complemental strand, 21714692 - 21714553
Alignment:
Q  122 aggaaattcgtcatgctttttatcaattcagcgtcgttgttatctttccacaatagcttgagtactgcgtaaggaagttgattctccaacaaaaccacat 221  Q
    ||||||||| ||||||||||||||||| ||   | ||  | |||||||||||||||||||||||||   ||||||||||||||||||||||||| |||||    
T  21714692 aggaaattcatcatgctttttatcaatccactctggtcttcatctttccacaatagcttgagtacttgataaggaagttgattctccaacaaaagcacat 21714593  T
Q  222 ccatcatcactagaaccagttgatcaaacttaatattcat 261  Q
    ||||||| || ||||| |||||||||| ||| ||||||||    
T  21714592 ccatcattacaagaacaagttgatcaaccttgatattcat 21714553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 163 - 257
Target Start/End: Complemental strand, 21664575 - 21664481
Alignment:
Q  163 atctttccacaatagcttgagtactgcgtaaggaagttgattctccaacaaaaccacatccatcatcactagaaccagttgatcaaacttaatat 257  Q
    |||||||||||||||||||||||||   ||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||    
T  21664575 atctttccacaatagcttgagtacttgataaggtagttgattctccaacaaaagcacatccatcatcacaagaaccagttgatcaaccttaatat 21664481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 123 - 257
Target Start/End: Original strand, 21807802 - 21807936
Alignment:
Q  123 ggaaattcgtcatgctttttatcaattcagcgtcgttgttatctttccacaatagcttgagtactgcgtaaggaagttgattctccaacaaaaccacatc 222  Q
    |||||||| ||||| |||||||||||||| | || |||||||||| |||||||||||| ||||||   ||||| ||||||||||||||||||| ||||||    
T  21807802 ggaaattcctcatgatttttatcaattcaccctcattgttatcttcccacaatagcttaagtactttataaggcagttgattctccaacaaaagcacatc 21807901  T
Q  223 catcatcactagaaccagttgatcaaacttaatat 257  Q
    | | ||||  |||||||||||||||| ||||||||    
T  21807902 cgttatcagaagaaccagttgatcaagcttaatat 21807936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 262
Target Start/End: Complemental strand, 21705105 - 21705006
Alignment:
Q  163 atctttccacaatagcttgagtactgcgtaaggaagttgattctccaacaaaaccacatccatcatcactagaaccagttgatcaaacttaatattcatc 262  Q
    |||||||||||| |||||||||||| | ||||| ||||||||||||||||||| |||||||  | |||| ||| |||||||||||| |||||||||||||    
T  21705105 atctttccacaaaagcttgagtacttcataaggcagttgattctccaacaaaagcacatcctccctcacaagagccagttgatcaaccttaatattcatc 21705006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 21792497 - 21792390
Alignment:
Q  124 gaaattcgtcatgctttttatcaattcagcgtcgttgttatctttccacaatagcttgagtactgcgtaaggaagttgattctccaacaaaaccacatcc 223  Q
    ||||||||||||||||| ||| ||| ||   | |||||  |||||||||||||||||||||||| | ||||| ||||||||||||||||||| |||||||    
T  21792497 gaaattcgtcatgctttctattaatgcactctggttgtcgtctttccacaatagcttgagtacttcataaggcagttgattctccaacaaaagcacatcc 21792398  T
Q  224 atcatcac 231  Q
    ||||||||    
T  21792397 atcatcac 21792390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 140 - 261
Target Start/End: Complemental strand, 21746017 - 21745896
Alignment:
Q  140 tttatcaattcagcgtcgttgttatctttccacaatagcttgagtactgcgtaaggaagttgattctccaacaaaaccacatccatcatcactagaacca 239  Q
    ||||||||||||   |||||||||||||| |||||||||| ||||||| | ||||| |||||||||||||||||||  ||||| |||||||| ||||  |    
T  21746017 tttatcaattcactctcgttgttatcttttcacaatagctagagtacttcataaggcagttgattctccaacaaaagtacatcgatcatcacaagaataa 21745918  T
Q  240 gttgatcaaacttaatattcat 261  Q
     | |||||| ||||||||||||    
T  21745917 ctagatcaagcttaatattcat 21745896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 21652536 - 21652461
Alignment:
Q  155 tcgttgttatctttccacaatagcttgagtactgcgtaaggaagttgattctccaacaaaaccacatccatcatca 230  Q
    |||||||  ||||||||||| ||||||||||||   |||||||||||||| |||||||||| ||||||||||||||    
T  21652536 tcgttgtcgtctttccacaaaagcttgagtacttgataaggaagttgattttccaacaaaagcacatccatcatca 21652461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 21786134 - 21786055
Alignment:
Q  17 aactgtgactcatttgtcattgatacactatgttctccttctccttttttgtttggaaccacgtcattctctttctctga 96  Q
    |||||||||||||||   ||||||| |||||||||||||||||||||| | |||||||||| ||| ||||| ||||||||    
T  21786134 aactgtgactcatttcgtattgataaactatgttctccttctccttttctttttggaaccatgtccttctccttctctga 21786055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 21788852 - 21788782
Alignment:
Q  17 aactgtgactcatttgtcattgatacactatgttctccttctccttttttgtttggaaccacgtcattctc 87  Q
    ||||| ||||||||||| |||||||||||||||||||||||||| |||   |||||||||| ||| |||||    
T  21788852 aactgggactcatttgttattgatacactatgttctccttctccctttccttttggaaccatgtccttctc 21788782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 21656950 - 21656895
Alignment:
Q  132 tcatgctttttatcaattcagcgtcgttgttatctttccacaatagcttgagtact 187  Q
    ||||||||||||||||||||   | ||||| |||||||||||||||||||||||||    
T  21656950 tcatgctttttatcaattcactcttgttgtcatctttccacaatagcttgagtact 21656895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 15714225 - 15714163
Alignment:
Q  35 attgatacactatgttctccttctccttttttgtttggaaccacgtcattctctttctctgac 97  Q
    ||||||||||||| || ||||||||||||| ||||||||||| |||  ||||| |||| ||||    
T  15714225 attgatacactatattgtccttctccttttctgtttggaaccccgttcttctccttctttgac 15714163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 21746119 - 21746077
Alignment:
Q  20 tgtgactcatttgtcattgatacactatgttctccttctcctt 62  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||    
T  21746119 tgtgactcatttgttattgatacattatgttctcctcctcctt 21746077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 21792591 - 21792549
Alignment:
Q  21 gtgactcatttgtcattgatacactatgttctccttctccttt 63  Q
    ||||||||| || ||||||||||||||||| ||||||||||||    
T  21792591 gtgactcatctggcattgatacactatgttgtccttctccttt 21792549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 21764648 - 21764601
Alignment:
Q  18 actgtgactcatttgtcatt---gatacactatgttctccttctcctt 62  Q
    |||||||||||||||| |||   |||||||||||||||||||||||||    
T  21764648 actgtgactcatttgttattattgatacactatgttctccttctcctt 21764601  T

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Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 21705235 - 21705199
Alignment:
Q  18 actgtgactcatttgtcattgatacactatgttctcc 54  Q
    |||||||||||||||  ||||||||||||||||||||    
T  21705235 actgtgactcatttggtattgatacactatgttctcc 21705199  T

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Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 21714809 - 21714729
Alignment:
Q  17 aactgtgactcatttgtcattgatacactatgttctccttctccttttttgtttggaaccacgtcattctctttctctgac 97  Q
    |||||||||||||||   ||||||| |||||| |||| |||| ||||| | |||||||||| ||| ||||  |||||||||    
T  21714809 aactgtgactcatttcgtattgataaactatgctctctttctgcttttctttttggaaccatgtccttcttcttctctgac 21714729  T

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Target: scaffold0182 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 124 - 261
Target Start/End: Complemental strand, 25880 - 25743
Alignment:
Q  124 gaaattcgtcatgctttttatcaattcagcgtcgttgttatctttccacaatagcttgagtactgcgtaaggaagttgattctccaacaaaaccacatcc 223  Q
    ||||| ||||||||||| ||||||||||   || || |  | |||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||    
T  25880 gaaatccgtcatgctttgtatcaattcactctcattctcgtttttccacaatagcttgagtacttcataaggaagttgattttccaacaaaaccacatcc 25781  T
Q  224 atcatcactagaaccagttgatcaaacttaatattcat 261  Q
    | |||||| ||||  |||||||||| ||||||||||||    
T  25780 accatcacaagaaaaagttgatcaaccttaatattcat 25743  T

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Target: scaffold0182; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 25966 - 25904
Alignment:
Q  35 attgatacactatgttctccttctccttttttgtttggaaccacgtcattctctttctctgac 97  Q
    ||||||||||||| |||||||||||| ||||| |||||| ||| ||| ||||| |||||||||    
T  25966 attgatacactatattctccttctccgtttttctttggacccatgtccttctccttctctgac 25904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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