View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10477_low_2 (Length: 292)
Name: NF10477_low_2
Description: NF10477
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10477_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 8564723 - 8564457
Alignment:
| Q |
1 |
acccaaaagcctgtaaaccaggctccaaaccttgtagcttcattctcttgagaagcaacaaaacttcacataaatccccaatctgagcatatgcagataa |
100 |
Q |
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| T |
8564723 |
acccaaaagcctgtaaaccaggctccaaaccttgtagcttcattctcttgagaagcaacaaaacttcacataaatccccaatctgagcatatgcagataa |
8564624 |
T |
|
| Q |
101 |
caaagaattccacgaaacaacatctctttgatccataaattcaaacaatttcctacaatcttcaatacttccacatttcccgtacaaattcaccatagaa |
200 |
Q |
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| T |
8564623 |
caaagaattccacgaaacaacatctcttcgatccataaattcaaacaatttcctacaatcttcaatacttccacatttcccgtacaaattcaccatagaa |
8564524 |
T |
|
| Q |
201 |
tttaacaaattcaaatctgacataaacccataaaaaattgcacaaccatgcaaacactgcacataag |
267 |
Q |
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| T |
8564523 |
tttaacaaattcaaatctgacataaacccataaaaaattgcacaaccatgcaaacactgcacataag |
8564457 |
T |
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