View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1047_low_2 (Length: 558)

Name: NF1047_low_2
Description: NF1047
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1047_low_2
NF1047_low_2
[»] chr7 (9 HSPs)
chr7 (30-361)||(44779405-44779735)
chr7 (360-550)||(44779168-44779361)
chr7 (389-434)||(44780571-44780616)
chr7 (366-406)||(30085547-30085587)
chr7 (366-403)||(16813435-16813472)
chr7 (366-406)||(7882922-7882962)
chr7 (366-406)||(25513603-25513643)
chr7 (366-406)||(40081903-40081943)
chr7 (366-406)||(43072865-43072905)
[»] chr8 (9 HSPs)
chr8 (366-406)||(1087239-1087279)
chr8 (366-406)||(8073571-8073611)
chr8 (366-406)||(35065513-35065553)
chr8 (366-406)||(37438508-37438548)
chr8 (366-406)||(5831541-5831581)
chr8 (366-406)||(31168980-31169020)
chr8 (366-406)||(36258762-36258802)
chr8 (366-406)||(38442433-38442473)
chr8 (366-414)||(42217391-42217439)
[»] chr6 (6 HSPs)
chr6 (366-406)||(7466511-7466551)
chr6 (366-406)||(31842458-31842498)
chr6 (366-406)||(4058859-4058899)
chr6 (366-406)||(6366684-6366724)
chr6 (366-406)||(30579518-30579558)
chr6 (366-406)||(34556603-34556643)
[»] chr4 (17 HSPs)
chr4 (366-406)||(25298461-25298501)
chr4 (367-408)||(2717355-2717396)
chr4 (366-406)||(6841028-6841068)
chr4 (366-406)||(37133460-37133500)
chr4 (366-406)||(44258700-44258740)
chr4 (366-406)||(44801763-44801803)
chr4 (366-408)||(16833465-16833507)
chr4 (366-406)||(8459587-8459627)
chr4 (366-406)||(21542109-21542149)
chr4 (376-404)||(22300533-22300561)
chr4 (366-406)||(22638039-22638079)
chr4 (366-406)||(25712658-25712698)
chr4 (366-406)||(29905239-29905279)
chr4 (366-406)||(34321015-34321055)
chr4 (366-406)||(35804161-35804201)
chr4 (366-406)||(36157252-36157292)
chr4 (366-406)||(56467871-56467911)
[»] chr3 (9 HSPs)
chr3 (366-404)||(52313164-52313202)
chr3 (366-406)||(28540948-28540988)
chr3 (366-406)||(31798076-31798116)
chr3 (366-419)||(40673811-40673864)
chr3 (366-406)||(170979-171019)
chr3 (366-406)||(36772560-36772600)
chr3 (366-406)||(45394164-45394204)
chr3 (366-406)||(48128717-48128757)
chr3 (360-404)||(48313710-48313754)
[»] chr2 (10 HSPs)
chr2 (366-404)||(10665352-10665390)
chr2 (366-406)||(6334108-6334148)
chr2 (366-406)||(12262736-12262776)
chr2 (366-406)||(41738094-41738134)
chr2 (360-406)||(38556297-38556343)
chr2 (366-415)||(41432548-41432597)
chr2 (366-406)||(19029971-19030011)
chr2 (366-406)||(20556101-20556141)
chr2 (366-406)||(22039440-22039480)
chr2 (366-406)||(24664519-24664559)
[»] scaffold0223 (1 HSPs)
scaffold0223 (366-406)||(28350-28390)
[»] chr5 (4 HSPs)
chr5 (366-406)||(6563199-6563239)
chr5 (366-406)||(4102357-4102397)
chr5 (366-406)||(9086268-9086308)
chr5 (366-406)||(20224942-20224982)
[»] chr1 (14 HSPs)
chr1 (366-406)||(2118612-2118652)
chr1 (366-406)||(12857612-12857652)
chr1 (366-406)||(28215997-28216037)
chr1 (366-406)||(40305126-40305166)
chr1 (366-406)||(43741122-43741162)
chr1 (366-406)||(45967441-45967481)
chr1 (373-408)||(3775832-3775867)
chr1 (366-406)||(2730432-2730472)
chr1 (366-406)||(21390969-21391009)
chr1 (366-406)||(40167321-40167361)
chr1 (366-406)||(43342839-43342879)
chr1 (366-406)||(46510471-46510511)
chr1 (366-406)||(46510684-46510724)
chr1 (366-406)||(46595233-46595273)
[»] scaffold0483 (1 HSPs)
scaffold0483 (366-406)||(9502-9542)
[»] scaffold0076 (1 HSPs)
scaffold0076 (366-406)||(16297-16337)
[»] scaffold0012 (1 HSPs)
scaffold0012 (366-406)||(47586-47626)


Alignment Details
Target: chr7 (Bit Score: 280; Significance: 1e-156; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 30 - 361
Target Start/End: Complemental strand, 44779735 - 44779405
Alignment:
Q  30 cttataatattttcctttaatatctttcagatatgtttagattaatggaatagaataaatttatgtttcgctgtttggataaagtagaacatattatatc 129  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||     
T  44779735 cttataacattttcctttaatatctttcagatatgtttaaattaatggaatagaataaatttatgtttcgctgtttggataaagtggaatatattatatt 44779636  T
Q  130 ttatttcactggtaaccctcacttatgttccccaccaatttttgagaaatttaacacaatcccttttatttgattttttaacttaccataaacaccgtta 229  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  44779635 ttatttcaccgataaccctcacttatgtcccccaccaatttttgagaaatttaacacaatcccttttatttgattttttaac-taccataaacaccgtta 44779537  T
Q  230 tctgtttcattctttcgcattcggcatcacacaaatgacactaataattttgcaatggtattttttgctttcaacaattgttgagaaaatttctttgcat 329  Q
    | ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44779536 tatgtttaattctttcgtattcggcatcacacaaatgacactaataattttgcaatggtattttttgctttcaacaattgttgagaaaatttctttgcat 44779437  T
Q  330 cacctatgctttcaagaattattgatagaaaa 361  Q
    ||||||||||||||||||||||||||||||||    
T  44779436 cacctatgctttcaagaattattgatagaaaa 44779405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 360 - 550
Target Start/End: Complemental strand, 44779361 - 44779168
Alignment:
Q  360 aaaatgaaaattctaaatatttataaggactatttacttaattaaccatgtatatattgatattcatgttatattctctgnnnnnnnnnnnnnnngggtt 459  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||               |||||    
T  44779361 aaaatgaaaattctaaatatttgtaaggactatttacttaattaatcatgtatatattgatattcatgttatattctctg---ttttttttttttgggtt 44779265  T
Q  460 aaatacagcaaca------acaaccaccaaccaaccaataaagtcttattccattaagcggggtcggctacgtaaattaaattaggccatattattc 550  Q
    |||||||||||||      |||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  44779264 aaatacagcaacaacaaccacaaccaccaaccaaccaatcaagtcttattccattaagcggggtcggctacataaattaaattaggccatattattc 44779168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 44780571 - 44780616
Alignment:
Q  389 ctatttacttaattaaccatgtatatattgatattcatgttatatt 434  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  44780571 ctatttacttaattaaccatgtatatattgataatcatgttatatt 44780616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 30085547 - 30085587
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  30085547 aaaattctgaatatttataaggactatttacttaattaacc 30085587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 403
Target Start/End: Complemental strand, 16813472 - 16813435
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaatta 403  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  16813472 aaaattttaaatatttataaggactatttatttaatta 16813435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 7882922 - 7882962
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||| |||||||||||| |||| ||||||||||||||||    
T  7882922 aaaattttaaatatttatagggaccatttacttaattaacc 7882962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 25513603 - 25513643
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  25513603 aaaattctgaatatttatagggaccatttacttaattaacc 25513643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 40081903 - 40081943
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  40081903 aaaattctgaatatttatagggaccatttacttaattaacc 40081943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 43072905 - 43072865
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  43072905 aaaattctgaatatttatagggaccatttacttaattaacc 43072865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 1087239 - 1087279
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  1087239 aaaattctgaatatttataaggactatttacttaattaacc 1087279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 8073611 - 8073571
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  8073611 aaaattctgaatatttatagggactatttacttaattaacc 8073571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 35065553 - 35065513
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  35065553 aaaattctgaatatttatagggactatttacttaattaacc 35065513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 37438548 - 37438508
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||||||||||||||||||| |||||| |||||||||    
T  37438548 aaaattctaaatatttataaggaccatttacataattaacc 37438508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 5831541 - 5831581
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  5831541 aaaattctgaatatttatagggaccatttacttaattaacc 5831581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 31169020 - 31168980
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    ||||||||||||||||||| |||| ||||| ||||||||||    
T  31169020 aaaattctaaatatttatagggaccatttatttaattaacc 31168980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 36258802 - 36258762
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||| ||||||||||||| || |||||||||||||||||    
T  36258802 aaaattttaaatatttataaagattatttacttaattaacc 36258762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 38442473 - 38442433
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||| | ||||||||||||||| ||||||||||||||||    
T  38442473 aaaattatgaatatttataaggaccatttacttaattaacc 38442433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 414
Target Start/End: Original strand, 42217391 - 42217439
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaaccatgtatat 414  Q
    ||||||||||||||||||| ||||||   |||||||||||||| |||||    
T  42217391 aaaattctaaatatttatagggactaaaaacttaattaaccatatatat 42217439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 7466511 - 7466551
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  7466511 aaaattctaaatatttataaggaccatttacttaattaacc 7466551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 31842498 - 31842458
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||||||||||||||||||| |||||||| |||||||    
T  31842498 aaaattctaaatatttataaggacaatttactttattaacc 31842458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 4058899 - 4058859
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||||||||||||||  ||| ||||||||||||||||    
T  4058899 aaaattctaaatatttatagagaccatttacttaattaacc 4058859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 6366684 - 6366724
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  6366684 aaaattctgaatatttatagggaccatttacttaattaacc 6366724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 30579518 - 30579558
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||||| ||||||||||||||    
T  30579518 aaaattctgaatatttatagggactaattacttaattaacc 30579558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 34556603 - 34556643
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  34556603 aaaattcttaatatttatagggaccatttacttaattaacc 34556643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 25298461 - 25298501
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  25298461 aaaattctaaatatttataaggaccatttacttaattaacc 25298501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 367 - 408
Target Start/End: Original strand, 2717355 - 2717396
Alignment:
Q  367 aaattctaaatatttataaggactatttacttaattaaccat 408  Q
    ||||| |||||||||||| |||||||||||||||||||||||    
T  2717355 aaattataaatatttatagggactatttacttaattaaccat 2717396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 6841028 - 6841068
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||||||||||||||||||  ||||||||||||||||    
T  6841028 aaaattctaaatatttataaggaacatttacttaattaacc 6841068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 37133460 - 37133500
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  37133460 aaaattctaaatatttatagggaccatttacttaattaacc 37133500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 44258740 - 44258700
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  44258740 aaaattctaaatatttatagggaccatttacttaattaacc 44258700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 44801803 - 44801763
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  44801803 aaaattctgaatatttataaggacaatttacttaattaacc 44801763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 366 - 408
Target Start/End: Original strand, 16833465 - 16833507
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaaccat 408  Q
    |||||||| | ||||||||||||| ||||||||||||||||||    
T  16833465 aaaattctgactatttataaggaccatttacttaattaaccat 16833507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 8459587 - 8459627
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  8459587 aaaattctgaatatttatagggaccatttacttaattaacc 8459627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 21542149 - 21542109
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    ||||||||||||||||||| |||| ||||| ||||||||||    
T  21542149 aaaattctaaatatttatagggaccatttatttaattaacc 21542109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 404
Target Start/End: Original strand, 22300533 - 22300561
Alignment:
Q  376 atatttataaggactatttacttaattaa 404  Q
    |||||||||||||||||||||||||||||    
T  22300533 atatttataaggactatttacttaattaa 22300561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 22638079 - 22638039
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||| |||||| ||||||||||||||||    
T  22638079 aaaattctgaatatttacaaggaccatttacttaattaacc 22638039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 25712698 - 25712658
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    ||||||||||||||||||| |||  ||||||||||||||||    
T  25712698 aaaattctaaatatttatagggatcatttacttaattaacc 25712658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 29905279 - 29905239
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    ||||||||||||||||| |  ||||||||||||||||||||    
T  29905279 aaaattctaaatatttacatagactatttacttaattaacc 29905239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 34321055 - 34321015
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  34321055 aaaattctgaatatttatagggaccatttacttaattaacc 34321015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 35804201 - 35804161
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  35804201 aaaattctgaatatttatagggaccatttacttaattaacc 35804161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 36157292 - 36157252
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  36157292 aaaattctgaatatttatagggaccatttacttaattaacc 36157252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 56467911 - 56467871
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||| | |||||||||| |||||||||||||||||||||    
T  56467911 aaaattatgaatatttatagggactatttacttaattaacc 56467871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000002; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 404
Target Start/End: Complemental strand, 52313202 - 52313164
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaa 404  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  52313202 aaaattctaaatatttataaggaccatttacttaattaa 52313164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 28540988 - 28540948
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  28540988 aaaattctgaatatttataaggaccatttacttaattaacc 28540948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 31798116 - 31798076
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  31798116 aaaattctgaatatttataaggacgatttacttaattaacc 31798076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 419
Target Start/End: Complemental strand, 40673864 - 40673811
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaaccatgtatatattga 419  Q
    |||||||| ||||||||||| ||| |||||||||||||| ||| ||||| ||||    
T  40673864 aaaattctgaatatttataaagaccatttacttaattaatcatttatattttga 40673811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 170979 - 171019
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||| | |||||||||||||||||||||    
T  170979 aaaattctgaatatttacagggactatttacttaattaacc 171019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 36772600 - 36772560
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  36772600 aaaattctgaatatttatagggaccatttacttaattaacc 36772560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 45394204 - 45394164
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  45394204 aaaattctgaatatttatagggaccatttacttaattaacc 45394164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 48128717 - 48128757
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  48128717 aaaattctgaatatttatatggaccatttacttaattaacc 48128757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 48313710 - 48313754
Alignment:
Q  360 aaaatgaaaattctaaatatttataaggactatttacttaattaa 404  Q
    ||||| |||||||| ||||||||||||||  ||||||||||||||    
T  48313710 aaaattaaaattctgaatatttataaggatcatttacttaattaa 48313754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 404
Target Start/End: Complemental strand, 10665390 - 10665352
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaa 404  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  10665390 aaaattctaaatatttataaggaccatttacttaattaa 10665352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 6334148 - 6334108
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  6334148 aaaattctgaatatttataaggaccatttacttaattaacc 6334108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 12262776 - 12262736
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  12262776 aaaattctaaatatttatagggaccatttacttaattaacc 12262736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 41738094 - 41738134
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  41738094 aaaattctgaatatttataaggaccatttacttaattaacc 41738134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 360 - 406
Target Start/End: Original strand, 38556297 - 38556343
Alignment:
Q  360 aaaatgaaaattctaaatatttataaggactatttacttaattaacc 406  Q
    ||||| |||||||| |||||||||| |||| ||||||||||||||||    
T  38556297 aaaatcaaaattctgaatatttatagggacaatttacttaattaacc 38556343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 415
Target Start/End: Complemental strand, 41432597 - 41432548
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaaccatgtatata 415  Q
    |||||| | ||||||||||||||| |||||||||||||||| | ||||||    
T  41432597 aaaattttgaatatttataaggaccatttacttaattaaccctatatata 41432548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 19030011 - 19029971
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  19030011 aaaattctgaatatttatagggaccatttacttaattaacc 19029971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 20556101 - 20556141
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| ||||||||||| ||| ||||||||||||||||    
T  20556101 aaaattctgaatatttataaagaccatttacttaattaacc 20556141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 22039440 - 22039480
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||||||||||||||  ||| ||||||||||||||||    
T  22039440 aaaattctaaatatttatatcgaccatttacttaattaacc 22039480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 24664519 - 24664559
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    ||||||||||||||||||||||||||   ||||||||||||    
T  24664519 aaaattctaaatatttataaggactaaaaacttaattaacc 24664559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 28350 - 28390
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  28350 aaaattttaaatatttataaggaccatttacttaattaacc 28390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000003; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 6563199 - 6563239
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  6563199 aaaattctaaatatctatagggactatttacttaattaacc 6563239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 4102397 - 4102357
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    ||||||||||||||||||||| | |||||| ||||||||||    
T  4102397 aaaattctaaatatttataagaattatttagttaattaacc 4102357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 9086308 - 9086268
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  9086308 aaaattctgaatatttatagggacaatttacttaattaacc 9086268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 20224942 - 20224982
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  20224942 aaaattctgaatatttatagggaccatttacttaattaacc 20224982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 2118612 - 2118652
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  2118612 aaaattctaaatatttatatggaccatttacttaattaacc 2118652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 12857652 - 12857612
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  12857652 aaaattctgaatatttataaggaccatttacttaattaacc 12857612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 28215997 - 28216037
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    ||||||||||||||||||| ||| |||||||||||||||||    
T  28215997 aaaattctaaatatttatagggattatttacttaattaacc 28216037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 40305166 - 40305126
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||||||||||||||| || |||||||||||||||||    
T  40305166 aaaattctaaatatttataaagattatttacttaattaacc 40305126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 43741162 - 43741122
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  43741162 aaaattctgaatatttataaggaccatttacttaattaacc 43741122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 45967441 - 45967481
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  45967441 aaaattctgaatatttatagggactatttacttaattaacc 45967481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 408
Target Start/End: Original strand, 3775832 - 3775867
Alignment:
Q  373 taaatatttataaggactatttacttaattaaccat 408  Q
    |||||||||||| |||||||||||||||||||||||    
T  3775832 taaatatttatatggactatttacttaattaaccat 3775867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 2730432 - 2730472
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| ||||||||||||||  ||||||||||||||||    
T  2730432 aaaattctgaatatttataaggatgatttacttaattaacc 2730472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 21390969 - 21391009
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||| | |||||||||||||||||||||    
T  21390969 aaaattctgaatatttacatggactatttacttaattaacc 21391009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 40167321 - 40167361
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||| |||||||| ||||||||||||||||    
T  40167321 aaaattcttaatattaataaggaccatttacttaattaacc 40167361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 43342879 - 43342839
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  43342879 aaaattctgaatatttatatggaccatttacttaattaacc 43342839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 46510511 - 46510471
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  46510511 aaaattctgaatatttatagggaccatttacttaattaacc 46510471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 46510684 - 46510724
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  46510684 aaaattctgaatatttatagggaccatttacttaattaacc 46510724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 46595273 - 46595233
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    ||||||||||||||||||||| |  ||||||||||||||||    
T  46595273 aaaattctaaatatttataagaatcatttacttaattaacc 46595233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 9502 - 9542
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    ||||||||||||||||||| |||| ||||||| ||||||||    
T  9502 aaaattctaaatatttatagggaccatttactcaattaacc 9542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 16337 - 16297
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    |||||||| |||||||||| |||| ||||||||||||||||    
T  16337 aaaattctgaatatttatagggaccatttacttaattaacc 16297  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Original strand, 47586 - 47626
Alignment:
Q  366 aaaattctaaatatttataaggactatttacttaattaacc 406  Q
    ||||||||||||||||||| |||  ||||||||||||||||    
T  47586 aaaattctaaatatttatagggatcatttacttaattaacc 47626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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