View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1047_low_6 (Length: 410)

Name: NF1047_low_6
Description: NF1047
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1047_low_6
NF1047_low_6
[»] chr7 (46 HSPs)
chr7 (1-406)||(20478100-20478505)
chr7 (109-410)||(56536-56837)
chr7 (91-195)||(27665896-27666000)
chr7 (100-195)||(29996345-29996440)
chr7 (1-91)||(56388-56478)
chr7 (1-91)||(27666041-27666131)
chr7 (1-87)||(29996494-29996580)
chr7 (93-194)||(46439362-46439463)
chr7 (93-187)||(47386048-47386142)
chr7 (93-194)||(35693202-35693303)
chr7 (8-93)||(37115500-37115585)
chr7 (1-87)||(6602393-6602479)
chr7 (93-194)||(24228241-24228342)
chr7 (93-194)||(39859062-39859162)
chr7 (93-185)||(30940266-30940358)
chr7 (1-93)||(34776889-34776981)
chr7 (93-195)||(38473974-38474076)
chr7 (101-190)||(23906098-23906186)
chr7 (16-93)||(35693344-35693421)
chr7 (1-93)||(24228383-24228475)
chr7 (1-93)||(30940399-30940491)
chr7 (1-93)||(39859203-39859295)
chr7 (1-93)||(45359394-45359486)
chr7 (1-63)||(366756-366818)
chr7 (1-63)||(37796185-37796247)
chr7 (5-50)||(7401955-7402000)
chr7 (6-63)||(33038801-33038858)
chr7 (1-93)||(38474117-38474209)
chr7 (24-94)||(13168204-13168274)
chr7 (100-194)||(13168321-13168414)
chr7 (100-194)||(45359534-45359627)
chr7 (93-186)||(6602526-6602618)
chr7 (1-62)||(20479689-20479750)
chr7 (1-62)||(35402027-35402088)
chr7 (1-62)||(35403589-35403650)
chr7 (93-194)||(37115372-37115473)
chr7 (6-79)||(45463733-45463806)
chr7 (171-307)||(23168353-23168488)
chr7 (100-184)||(48852189-48852273)
chr7 (1-92)||(47386184-47386275)
chr7 (8-62)||(27664495-27664549)
chr7 (6-63)||(2167542-2167599)
chr7 (6-79)||(4322560-4322633)
chr7 (8-93)||(11682846-11682931)
chr7 (6-63)||(46996706-46996763)
chr7 (8-93)||(48852321-48852406)
[»] chr5 (33 HSPs)
chr5 (1-406)||(29621442-29621847)
chr5 (1-406)||(40780608-40781013)
chr5 (4-406)||(42473268-42473670)
chr5 (100-410)||(32135464-32135775)
chr5 (91-195)||(2854160-2854263)
chr5 (91-194)||(24541043-24541146)
chr5 (93-194)||(34327826-34327927)
chr5 (93-195)||(8539866-8539968)
chr5 (93-190)||(17574508-17574605)
chr5 (1-91)||(2854303-2854392)
chr5 (93-190)||(7268033-7268130)
chr5 (93-187)||(21841182-21841276)
chr5 (1-93)||(17574376-17574468)
chr5 (1-91)||(24541187-24541278)
chr5 (100-185)||(18624849-18624934)
chr5 (1-94)||(36057586-36057679)
chr5 (1-93)||(7267901-7267993)
chr5 (1-93)||(30468254-30468346)
chr5 (1-93)||(34327693-34327785)
chr5 (7-93)||(18624982-18625068)
chr5 (93-194)||(12737329-12737429)
chr5 (100-194)||(30468113-30468206)
chr5 (93-194)||(12800152-12800252)
chr5 (1-50)||(27075878-27075927)
chr5 (1-93)||(8539733-8539825)
chr5 (6-63)||(18728606-18728663)
chr5 (1-62)||(21842962-21843023)
chr5 (6-63)||(32087577-32087634)
chr5 (1-62)||(40782181-40782242)
chr5 (7-87)||(2179851-2179931)
chr5 (1-62)||(2852944-2853005)
chr5 (1-62)||(29620196-29620257)
chr5 (6-63)||(43318064-43318121)
[»] chr2 (40 HSPs)
chr2 (1-406)||(37020566-37020971)
chr2 (7-406)||(6785662-6786061)
chr2 (4-406)||(24207732-24208125)
chr2 (93-195)||(17696397-17696499)
chr2 (100-194)||(2767132-2767226)
chr2 (93-195)||(6797698-6797800)
chr2 (93-195)||(40560414-40560516)
chr2 (1-93)||(39664742-39664834)
chr2 (1-93)||(40560281-40560373)
chr2 (100-194)||(42519056-42519151)
chr2 (93-190)||(16763266-16763363)
chr2 (93-194)||(19908099-19908199)
chr2 (8-93)||(42519199-42519284)
chr2 (1-93)||(2766992-2767084)
chr2 (1-93)||(16763134-16763226)
chr2 (104-187)||(39455371-39455454)
chr2 (100-187)||(44709604-44709691)
chr2 (1-93)||(14389078-14389170)
chr2 (1-93)||(19908240-19908332)
chr2 (1-93)||(44709739-44709831)
chr2 (8-94)||(17696271-17696357)
chr2 (202-304)||(40097848-40097948)
chr2 (6-79)||(11023001-11023074)
chr2 (8-92)||(16377192-16377276)
chr2 (229-304)||(11315073-11315148)
chr2 (93-155)||(14388975-14389037)
chr2 (1-62)||(24205656-24205717)
chr2 (1-62)||(37022155-37022216)
chr2 (93-194)||(39664601-39664701)
chr2 (205-304)||(4416688-4416785)
chr2 (6-49)||(37417336-37417379)
chr2 (8-91)||(39455234-39455317)
chr2 (1-62)||(2577450-2577511)
chr2 (1-50)||(4046354-4046403)
chr2 (6-63)||(11315339-11315396)
chr2 (1-62)||(14387407-14387468)
chr2 (1-62)||(16764581-16764642)
chr2 (2-63)||(26584821-26584882)
chr2 (6-63)||(29909664-29909721)
chr2 (1-49)||(6797565-6797613)
[»] chr6 (26 HSPs)
chr6 (1-406)||(32455552-32455957)
chr6 (1-305)||(3456806-3457110)
chr6 (91-410)||(13613198-13613517)
chr6 (1-91)||(13613558-13613648)
chr6 (93-194)||(20523557-20523658)
chr6 (1-93)||(20523424-20523516)
chr6 (1-93)||(32439065-32439157)
chr6 (18-93)||(10568474-10568549)
chr6 (93-187)||(9398851-9398945)
chr6 (100-190)||(32438920-32439010)
chr6 (1-94)||(9398718-9398811)
chr6 (93-194)||(11355413-11355513)
chr6 (14-93)||(7049828-7049907)
chr6 (160-304)||(25171832-25171975)
chr6 (1-92)||(7372933-7373024)
chr6 (100-191)||(7049955-7050046)
chr6 (7-93)||(6899549-6899635)
chr6 (93-187)||(32517068-32517162)
chr6 (6-79)||(17952030-17952103)
chr6 (1-62)||(32454306-32454367)
chr6 (1-62)||(32518467-32518528)
chr6 (6-49)||(3018450-3018493)
chr6 (101-187)||(10568598-10568684)
chr6 (26-92)||(32516960-32517026)
chr6 (1-62)||(3480627-3480688)
chr6 (1-62)||(18645074-18645135)
[»] chr1 (42 HSPs)
chr1 (1-406)||(47012743-47013148)
chr1 (21-406)||(1442599-1442983)
chr1 (1-406)||(9121342-9121734)
chr1 (91-410)||(33602261-33602579)
chr1 (1-194)||(51896017-51896218)
chr1 (91-195)||(46583387-46583491)
chr1 (7-91)||(33602620-33602704)
chr1 (1-91)||(46583532-46583622)
chr1 (101-195)||(2869778-2869872)
chr1 (93-190)||(34777975-34778072)
chr1 (1-93)||(4855940-4856032)
chr1 (93-185)||(15104632-15104724)
chr1 (1-93)||(34778112-34778204)
chr1 (101-190)||(26225390-26225479)
chr1 (93-194)||(31238328-31238428)
chr1 (93-193)||(3013303-3013403)
chr1 (93-190)||(27087473-27087570)
chr1 (1-93)||(15104499-15104591)
chr1 (8-87)||(6818658-6818737)
chr1 (1-94)||(2869637-2869730)
chr1 (1-93)||(27087341-27087433)
chr1 (1-93)||(31238469-31238561)
chr1 (100-190)||(4855805-4855893)
chr1 (93-194)||(6818511-6818611)
chr1 (1-86)||(50556078-50556163)
chr1 (1-90)||(3013447-3013542)
chr1 (1-93)||(25278342-25278434)
chr1 (93-187)||(37344533-37344627)
chr1 (6-79)||(5783427-5783500)
chr1 (1-62)||(9120097-9120158)
chr1 (1-62)||(25276800-25276861)
chr1 (1-62)||(37345932-37345993)
chr1 (6-63)||(42134545-42134602)
chr1 (1-62)||(46582068-46582129)
chr1 (1-62)||(47011514-47011575)
chr1 (1-45)||(25278975-25279019)
chr1 (1-93)||(37344400-37344492)
chr1 (6-49)||(18183961-18184004)
chr1 (6-49)||(36895528-36895571)
chr1 (1-62)||(1444151-1444212)
chr1 (1-62)||(8168000-8168061)
chr1 (100-185)||(50555939-50556023)
[»] chr8 (51 HSPs)
chr8 (4-406)||(27406578-27406980)
chr8 (7-406)||(15305861-15306260)
chr8 (7-406)||(15486230-15486629)
chr8 (91-194)||(27691343-27691446)
chr8 (91-192)||(33708658-33708759)
chr8 (1-91)||(27691212-27691302)
chr8 (1-91)||(33708800-33708890)
chr8 (101-195)||(42941973-42942067)
chr8 (93-190)||(5036640-5036737)
chr8 (93-192)||(41042438-41042537)
chr8 (93-190)||(13108193-13108290)
chr8 (1-93)||(13108330-13108422)
chr8 (1-93)||(38547286-38547378)
chr8 (93-190)||(40339536-40339633)
chr8 (1-93)||(8609781-8609873)
chr8 (1-93)||(13282536-13282628)
chr8 (1-93)||(13486093-13486185)
chr8 (1-93)||(41825638-41825730)
chr8 (100-194)||(13485953-13486045)
chr8 (18-93)||(42941849-42941924)
chr8 (93-187)||(8609647-8609741)
chr8 (93-193)||(9673012-9673118)
chr8 (7-93)||(9673159-9673245)
chr8 (7-93)||(41042578-41042664)
chr8 (1-93)||(26242308-26242400)
chr8 (9-92)||(22272402-22272485)
chr8 (93-190)||(38547418-38547513)
chr8 (160-329)||(11721465-11721633)
chr8 (1-93)||(7745106-7745198)
chr8 (7-90)||(40339677-40339760)
chr8 (1-62)||(601674-601735)
chr8 (1-62)||(8608296-8608357)
chr8 (1-62)||(33761127-33761188)
chr8 (6-63)||(37526027-37526084)
chr8 (6-79)||(40020623-40020696)
chr8 (216-304)||(9184700-9184788)
chr8 (1-32)||(29237209-29237240)
chr8 (1-32)||(29239187-29239218)
chr8 (7-62)||(35510789-35510844)
chr8 (5-63)||(11788383-11788441)
chr8 (6-63)||(9184446-9184503)
chr8 (1-62)||(13283965-13284026)
chr8 (6-63)||(31821481-31821538)
chr8 (1-62)||(33707264-33707325)
chr8 (1-62)||(33762683-33762744)
chr8 (1-62)||(35509272-35509333)
chr8 (4-32)||(15308261-15308289)
chr8 (4-32)||(15488630-15488658)
chr8 (6-62)||(31201148-31201204)
chr8 (100-191)||(41825498-41825590)
chr8 (7-63)||(42897778-42897834)
[»] chr4 (40 HSPs)
chr4 (93-399)||(35404077-35404378)
chr4 (91-192)||(43519613-43519714)
chr4 (1-91)||(43519482-43519572)
chr4 (93-194)||(11255772-11255873)
chr4 (93-190)||(51012116-51012213)
chr4 (229-315)||(25993826-25993912)
chr4 (100-194)||(41761578-41761672)
chr4 (93-191)||(41781730-41781828)
chr4 (1-93)||(41761720-41761812)
chr4 (1-91)||(49523182-49523272)
chr4 (1-93)||(51011984-51012076)
chr4 (100-187)||(49523322-49523409)
chr4 (100-185)||(42980833-42980918)
chr4 (1-93)||(42980693-42980785)
chr4 (18-93)||(41781614-41781689)
chr4 (100-191)||(48646582-48646673)
chr4 (100-190)||(52868005-52868094)
chr4 (93-191)||(2693087-2693186)
chr4 (100-187)||(11601868-11601955)
chr4 (6-93)||(48646721-48646808)
chr4 (17-59)||(11601744-11601786)
chr4 (1-62)||(4173710-4173771)
chr4 (6-79)||(5484603-5484676)
chr4 (1-62)||(33265980-33266041)
chr4 (6-79)||(39083702-39083775)
chr4 (6-79)||(39921557-39921630)
chr4 (1-62)||(43507225-43507286)
chr4 (1-62)||(43508623-43508684)
chr4 (6-79)||(43779855-43779928)
chr4 (1-93)||(35404419-35404511)
chr4 (6-49)||(27624869-27624912)
chr4 (6-77)||(39189445-39189516)
chr4 (6-49)||(44558511-44558554)
chr4 (4-62)||(835012-835070)
chr4 (1-62)||(4169744-4169805)
chr4 (6-79)||(32652162-32652235)
chr4 (6-79)||(44994275-44994348)
chr4 (7-63)||(2827468-2827524)
chr4 (6-62)||(44794765-44794821)
chr4 (6-62)||(47941874-47941930)
[»] chr3 (63 HSPs)
chr3 (240-409)||(19987254-19987426)
chr3 (91-194)||(44794396-44794499)
chr3 (91-194)||(2660401-2660504)
chr3 (1-91)||(3152214-3152304)
chr3 (91-212)||(19987430-19987552)
chr3 (1-91)||(19987590-19987680)
chr3 (93-194)||(23293022-23293123)
chr3 (93-194)||(44276048-44276149)
chr3 (1-91)||(44794265-44794355)
chr3 (93-194)||(17515501-17515602)
chr3 (93-190)||(35905569-35905666)
chr3 (93-190)||(54898627-54898724)
chr3 (1-91)||(2660270-2660360)
chr3 (101-190)||(7884730-7884819)
chr3 (93-190)||(53190616-53190713)
chr3 (94-190)||(2226009-2226105)
chr3 (91-151)||(3152113-3152173)
chr3 (1-93)||(23293164-23293256)
chr3 (1-93)||(53190753-53190845)
chr3 (93-191)||(43765328-43765426)
chr3 (93-194)||(27898934-27899034)
chr3 (8-93)||(51684675-51684760)
chr3 (1-93)||(17515368-17515460)
chr3 (1-93)||(21348781-21348873)
chr3 (1-93)||(27899075-27899167)
chr3 (6-93)||(41977813-41977900)
chr3 (100-190)||(41977947-41978035)
chr3 (91-190)||(46112676-46112775)
chr3 (93-191)||(600900-600998)
chr3 (8-93)||(42279572-42279657)
chr3 (1-93)||(30599912-30600004)
chr3 (1-93)||(35905706-35905798)
chr3 (1-93)||(43765195-43765287)
chr3 (18-93)||(2377104-2377179)
chr3 (100-191)||(51684808-51684899)
chr3 (21-87)||(7884873-7884939)
chr3 (93-155)||(30599809-30599871)
chr3 (1-93)||(2226146-2226238)
chr3 (148-195)||(3151698-3151745)
chr3 (18-93)||(44276190-44276265)
chr3 (100-191)||(48830661-48830752)
chr3 (6-93)||(48830800-48830887)
chr3 (1-63)||(23876982-23877044)
chr3 (1-63)||(25535253-25535315)
chr3 (100-194)||(46197918-46198012)
chr3 (1-79)||(54898495-54898573)
chr3 (6-59)||(23774215-23774268)
chr3 (1-62)||(38191953-38192014)
chr3 (1-62)||(46308865-46308926)
chr3 (1-62)||(46611273-46611334)
chr3 (6-63)||(48633940-48633997)
chr3 (1-62)||(53187800-53187861)
chr3 (1-60)||(3150310-3150369)
chr3 (8-62)||(46112552-46112606)
chr3 (8-90)||(46197785-46197867)
chr3 (95-172)||(21348916-21348993)
chr3 (6-63)||(33113184-33113241)
chr3 (1-62)||(38193480-38193541)
chr3 (1-62)||(46310406-46310467)
chr3 (1-62)||(53092681-53092742)
chr3 (1-62)||(53094243-53094304)
chr3 (160-304)||(54092945-54093088)
chr3 (1-62)||(54900044-54900105)
[»] scaffold0058 (5 HSPs)
scaffold0058 (91-195)||(3483-3587)
scaffold0058 (91-195)||(4655-4759)
scaffold0058 (1-91)||(3352-3442)
scaffold0058 (1-91)||(4524-4614)
scaffold0058 (1-62)||(14313-14374)
[»] scaffold0564 (1 HSPs)
scaffold0564 (93-190)||(8451-8548)
[»] scaffold1454 (2 HSPs)
scaffold1454 (100-190)||(1460-1550)
scaffold1454 (7-87)||(1327-1407)
[»] scaffold0081 (1 HSPs)
scaffold0081 (1-62)||(54228-54289)
[»] scaffold0024 (1 HSPs)
scaffold0024 (100-152)||(37402-37454)


Alignment Details
Target: chr7 (Bit Score: 358; Significance: 0; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 1 - 406
Target Start/End: Original strand, 20478100 - 20478505
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtcagccatg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |    
T  20478100 tttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacg 20478199  T
Q  101 tgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattca 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20478200 tgtacaaggactaaactgatggaaattgtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattca 20478299  T
Q  201 ctttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcat 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  20478300 ctttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaactgtcaccctcttcacttcaccaaaatcatcat 20478399  T
Q  301 catcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaacgttgttttccattcactcttgt 400  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  20478400 catcaccggcgatcatccttggaaaagattcggttttgaagtcagattttgtggtttgtcaaggtatagccattaaactttgttttccattcactcttgt 20478499  T
Q  401 tcgttt 406  Q
    ||||||    
T  20478500 tcgttt 20478505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 109 - 410
Target Start/End: Original strand, 56536 - 56837
Alignment:
Q  109 gactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattcactttcatc 208  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  56536 gactaaattgatggaaatggtcaaaattcgatatttaacatttcagtctcttttttcctgtgttttcaattatacccctctattaccattctctttcatc 56635  T
Q  209 ctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatcatcg 308  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||| ||    
T  56636 ctcacattttcactcagaagcatcaaacatgtccctagcctttcaccttcccgcctaaattgtcaccctcttcacttcaccaaaatcatcatcatcaccg 56735  T
Q  309 gcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaacgttgttttccattcactcttgttcgtttct 408  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  56736 gcgatcatccttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaactttgttttccattcactcttgttcgtttct 56835  T
Q  409 cc 410  Q
    ||    
T  56836 cc 56837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 27666000 - 27665896
Alignment:
Q  91 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27666000 gtcagccacgtgtacaaggactaaattgatggaaattgtcaaaattcgatatttaacatttcagtctcttttttcctgtgttttcaattatacccctcta 27665901  T
Q  191 ttacc 195  Q
    |||||    
T  27665900 ttacc 27665896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 100 - 195
Target Start/End: Complemental strand, 29996440 - 29996345
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattacc 195  Q
    |||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  29996440 gtgtacaaggactaaattgatggaaatggtcaaaattcaatatttaacatttcagtctcttttttcctgtgtttccaattatactcctctattacc 29996345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 56388 - 56478
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 91  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||| ||||||||||||||||||    
T  56388 ttttgcgaaatatcaaattagtccctgaattttacagacgtccatcaattcactccctccgtccaaaatgtctgttagtagtgatgatgtg 56478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 27666131 - 27666041
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 91  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||| | |||||| |||||||||||||    
T  27666131 ttttgcgaaatatcaaattagtccctgaattttacaaacgtccatcaaatccgtccctccgtccaaaaggcccgttaatagtgatgatgtg 27666041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 29996580 - 29996494
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 87  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||  |||||||| || |||| |||||||| |||||||||    
T  29996580 ttttgcgaaatatcaaattaatccctgaattttacagacgtccatcaaattcgtccctccatccaaaaggtccgttaatagtgatga 29996494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 46439463 - 46439362
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| ||||||| |||||||| |||||||||| || ||||||||| ||||||| ||||| | |  |||||||||||||||||||||||| ||||||||    
T  46439463 cagccacgtgtacatggactaaattgatggaaatggtaaaaattcgagatttaacttttcaatgtaatttttcctgtgtttccaattatacacctctatt 46439364  T
Q  193 ac 194  Q
    ||    
T  46439363 ac 46439362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 93 - 187
Target Start/End: Complemental strand, 47386142 - 47386048
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 187  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |  |||||| || ||||||||||||||||||    
T  47386142 cagccacgtgtacaaggactaaattgatggaaattgtaaaaattcgagatttaacttttcagtgtaatttttcttgggtttccaattatacccct 47386048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 35693303 - 35693202
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||||||||||||| ||||| |||| || || |||||| ||||||| ||||||| |  |||||| ||||||||||||||||||| ||||||    
T  35693303 cagccacgtgtacaaggactaaattgatgaaaatggtaaagattcgagatttaacttttcagtataatttttcatgtgtttccaattatacccatctatt 35693204  T
Q  193 ac 194  Q
    ||    
T  35693203 ac 35693202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 37115585 - 37115500
Alignment:
Q  8 aaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    ||||||| | ||||| ||||||||||||||||||||||||||  |||||||||||| ||||  ||||||||| |||||||||||||    
T  37115585 aaatatctatttagtacctgaattttacagacgtccatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgtgtc 37115500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 6602393 - 6602479
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 87  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  6602393 ttttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6602479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 24228342 - 24228241
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||| | ||||||| |||||||||| || |||||| || ||||||  |||||||||  ||||| |||||||| ||||||||||||||||||    
T  24228342 cagccacgtgtacgaagactaaattgatggaaattgtaaaaatttgagatttaatttttcagtctaattttttctgtgttttcaattatacccctctatt 24228243  T
Q  193 ac 194  Q
    ||    
T  24228242 ac 24228241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 39859162 - 39859062
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||| |||| || ||||| | |  |||||||||||||| ||||||||||||||||||    
T  39859162 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttgacttttcaatgtaatttttcctgtgttt-caattatacccctctatt 39859064  T
Q  193 ac 194  Q
    ||    
T  39859063 ac 39859062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 30940358 - 30940266
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattataccc 185  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| ||||||| |||| || |  ||||| |||||||| |||||||||||    
T  30940358 cagccacgtgtacaaggactaaattgatggaaattgtaaaaattcgagatttaacttttcggtgtaattttttctgtgttttcaattataccc 30940266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 34776981 - 34776889
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  |||||||||  |||||| |||||    
T  34776981 ttttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaaactccgttagtgatgatgacgtgtc 34776889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 93 - 195
Target Start/End: Complemental strand, 38474076 - 38473974
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||| |||||||| || |||||||||| || ||||||| | ||||||| ||||||| |  ||||| ||||||||||||||||| | |||||||    
T  38474076 cagccacgtgtgcaaggactgaattgatggaaatggtaaaaattcaagatttaacttttcagtgtaattttttctgtgtttccaattatatctctctatt 38473977  T
Q  193 acc 195  Q
    |||    
T  38473976 acc 38473974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 101 - 190
Target Start/End: Complemental strand, 23906186 - 23906098
Alignment:
Q  101 tgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    ||||||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |   |||||  |||||||||||||||||||||||    
T  23906186 tgtacaaggactaaattgatggaaattgtaaaaattcgagatttaacttttcagtgt-aattttctcgtgtttccaattatacccctcta 23906098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 35693421 - 35693344
Alignment:
Q  16 aattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    ||||||||||||||||||||||||||||||||||   |||||||| || ||||  || |||||| |||||||||||||    
T  35693421 aattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagttctgttagtggtgatgatgtgtc 35693344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 24228475 - 24228383
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | |||||| |||||||||||||||||||||||||   |||||| |||| ||||  ||| ||||| |||||||||||||    
T  24228475 ttttgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagctccattagtggtgatgatgtgtc 24228383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 30940491 - 30940399
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||| |||| |||||||   ||| ||||||| ||||  ||||||||| |||||||||||||    
T  30940491 ttttacgaaatatctatttagtccctgaattttacaaacgttcatcaaaatggtctctccgtccaaaagctccgttagtggtgatgatgtgtc 30940399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 39859295 - 39859203
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||| |||||||||||||||||| |||||   ||||||||||| ||||  ||||||||| ||||||| |||||    
T  39859295 ttttgcgaaatatctatttagtccttgaattttacagacgtccgtcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc 39859203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 45359394 - 45359486
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||| ||||||||||||||||||||||||   |||||||| || ||||  ||||||||| ||||||| |||||    
T  45359394 ttttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctccatccaaaagctccgttagtggtgatgacgtgtc 45359486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 366756 - 366818
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    ||||| |||||||||||||||||||||||||| ||||||||| |||||||   ||||||||||    
T  366756 ttttttgaaatatcaaattagtccctgaatttaacagacgtctatcaaattcatccctccgtc 366818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 37796247 - 37796185
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    |||| ||||||||| | |||||||||||||||||| |||||||||||||  ||||||||||||    
T  37796247 ttttgcgaaatatctatttagtccctgaattttacggacgtccatcaaaatagtccctccgtc 37796185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 7401955 - 7402000
Alignment:
Q  5 tcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 50  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||    
T  7401955 tcgaaatatcaaattcgtccctgaatttaacagacgtccatcaaat 7402000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 33038858 - 33038801
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    ||||||||||| |||||||||||||||| |||||||||||||||   |||||||||||    
T  33038858 cgaaatatcaacttagtccctgaatttttcagacgtccatcaaaaaggtccctccgtc 33038801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 38474209 - 38474117
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||| ||||||||||||||| | ||||||   |||| |||||| ||||  ||||||||| |||||||||||||    
T  38474209 ttttgcgaaatatctatttagtccttgaattttacagacgcctatcaaaatggtccatccgtccaaaagctccgttagtggtgatgatgtgtc 38474117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 13168204 - 13168274
Alignment:
Q  24 cctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtca 94  Q
    ||||||||||||||||||||||||||   |||| |||||| ||||  ||||||||| ||||||| ||||||    
T  13168204 cctgaattttacagacgtccatcaaaatggtccatccgtccaaaagctccgttagtggtgatgacgtgtca 13168274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 194
Target Start/End: Original strand, 13168321 - 13168414
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattac 194  Q
    |||||||||||||||  |||||||||| || ||||||||| |||| |  ||||| | |  ||||| ||||| |||||||||||||||||||||||    
T  13168321 gtgtacaaggactaatttgatggaaatggtaaaaattcgagatttgaattttcaatgtaattttttctgtg-ttccaattatacccctctattac 13168414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 194
Target Start/End: Original strand, 45359534 - 45359627
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattac 194  Q
    |||||||||||||||  |||||||||| || ||||||||| |||| || ||||| | |  ||||||||||| ||||||||||||||  |||||||    
T  45359534 gtgtacaaggactaatttgatggaaatggtaaaaattcgagatttgacttttcaatgtaatttttcctgtg-ttccaattatacccagctattac 45359627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 186
Target Start/End: Original strand, 6602526 - 6602618
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccc 186  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||| ||||| | ||||||| |  |||||| |||  |||||||||||||||    
T  6602526 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttatcttttcagtgtaatttttcttgt-attccaattatacccc 6602618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20479750 - 20479689
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    ||||||||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  20479750 tttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 20479689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 35402027 - 35402088
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  35402027 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 35402088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 35403650 - 35403589
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  35403650 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 35403589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 37115473 - 37115372
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||||||||||| | | ||| |||| || ||||||||| ||||||| ||| ||| |  ||||| | || |||| |||||||||||||||||    
T  37115473 cagccacgtgtacaaggactatattaatgaaaatggtaaaaattcgagatttaactttttagtgtaattttttccgtatttcaaattatacccctctatt 37115374  T
Q  193 ac 194  Q
    ||    
T  37115373 ac 37115372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 45463733 - 45463806
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 79  Q
    |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  45463733 cgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 45463806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 307
Target Start/End: Original strand, 23168353 - 23168488
Alignment:
Q  171 tttccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccg 270  Q
    ||||||||| |||||||||||||||  |  ||| |||||||||| |||||||||||  |||||||||  ||  | ||||||| ||||||||   |||||     
T  23168353 tttccaattttacccctctattacccataccttccatcctcaca-tttcactcagacacatcaaacacatcattgacctttctccttcccgttaaaacct 23168451  T
Q  271 tcatcctcttcacttcaccaaaatcatcatcatcatc 307  Q
    | | | |||| || || ||||||||||||||||||||    
T  23168452 ttaccatcttaacctctccaaaatcatcatcatcatc 23168488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 184
Target Start/End: Complemental strand, 48852273 - 48852189
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacc 184  Q
    ||||||||| |||||  |||||||||| || ||||||| |  |||||| ||| ||| || ||||| |||||||||||||||||||    
T  48852273 gtgtacaagaactaatttgatggaaatggtaaaaattccagttttaactttttagtgtcattttttctgtgtttccaattatacc 48852189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 47386275 - 47386184
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgt 92  Q
    |||| ||||||||  | |||||| || ||||||||||||||||||||||   |||  |||||| ||||  ||||||||| ||||||||||||    
T  47386275 ttttgcgaaatatttatttagtctctaaattttacagacgtccatcaaaatggtcattccgtccaaaagctccgttagtggtgatgatgtgt 47386184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 27664495 - 27664549
Alignment:
Q  8 aaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  27664495 aaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 27664549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 2167542 - 2167599
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    ||||||||||| |||||||||||||||  |||||| ||||||||   |||||||||||    
T  2167542 cgaaatatcaacttagtccctgaatttgtcagacgcccatcaaaaaggtccctccgtc 2167599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 4322633 - 4322560
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 79  Q
    |||||||||||| ||||||||||||||    ||| |||||||| |  ||||||||||| |||| ||||||||||    
T  4322633 cgaaatatcaaaatagtccctgaatttgtttgacatccatcaatttcgtccctccgtccaaaaggtccgttagt 4322560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 11682846 - 11682931
Alignment:
Q  8 aaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    ||||||||||||||||| ||||||    ||||||||||||| | |||||||||||| ||  | || |||||| ||||||| |||||    
T  11682846 aaatatcaaattagtccttgaattcgttagacgtccatcaatttagtccctccgtccaatctctctgttagtggtgatgaggtgtc 11682931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 46996763 - 46996706
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    ||||||||||| |||||| ||||||||  |||||||||||||||   |||||||||||    
T  46996763 cgaaatatcaacttagtcactgaatttgtcagacgtccatcaaaaaggtccctccgtc 46996706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 48852406 - 48852321
Alignment:
Q  8 aaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    ||||||| | ||| ||| ||||||||||||||||||||||||   ||| ||| ||| ||||  || |||||| |||||||||||||    
T  48852406 aaatatctatttaatccttgaattttacagacgtccatcaaaatggtctctcggtccaaaagctctgttagtggtgatgatgtgtc 48852321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 358; Significance: 0; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 1 - 406
Target Start/End: Complemental strand, 29621847 - 29621442
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtcagccatg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |    
T  29621847 tttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacg 29621748  T
Q  101 tgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattca 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29621747 tgtacaaggactaaactgatggaaattgtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattca 29621648  T
Q  201 ctttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcat 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  29621647 ctttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaactgtcaccctcttcacttcaccaaaatcatcat 29621548  T
Q  301 catcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaacgttgttttccattcactcttgt 400  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||| |    
T  29621547 catcatcggcgatcatccttggaaaagattcggttttgaagtcagattttgtggtttgtcaaggtatagccattaaactttgttttccattcactcttat 29621448  T
Q  401 tcgttt 406  Q
    ||||||    
T  29621447 tcgttt 29621442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 1 - 406
Target Start/End: Original strand, 40780608 - 40781013
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtcagccatg 100  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| |    
T  40780608 tttttcgaaatatcaaattagtccctgaattttgcaaacgtccatcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgtgtcagccacg 40780707  T
Q  101 tgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattca 200  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  40780708 tgtacagggactaaactgatggaaattgtcaaaatttgatatttaacatttcagtctcttttttcctgtgttttcaattatacccttctattaccattca 40780807  T
Q  201 ctttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcat 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  40780808 ctttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaactgtcaccctcttcacttcaccaaaatcatcat 40780907  T
Q  301 catcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaacgttgttttccattcactcttgt 400  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  40780908 catcaccggcgatcatccttggaaaagattcggttttgaagtcagattttgtggtttgtcaaggtatagccattcaactttgttttcctttcactcttgt 40781007  T
Q  401 tcgttt 406  Q
    ||||||    
T  40781008 tcgttt 40781013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 4 - 406
Target Start/End: Complemental strand, 42473670 - 42473268
Alignment:
Q  4 ttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtcagccatgtgt 103  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||||||| ||||    
T  42473670 ttcgaaatatcaaaatagtccctgaattttacagacgtccatcaaatcagtccttccgtccaaaatgtccgttaacagtgatgatgtgtcagccacgtgt 42473571  T
Q  104 acaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattcactt 203  Q
    ||||||||||||||||||||||| |||||||||| | | ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  42473570 acaaggactaaactgatggaaatggtcaaaattcaaaaattaacatttcagtttcatttttcctgtgtttccaattatacccctctattaccattcactt 42473471  T
Q  204 tcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcat 303  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42473470 tcatcctcagattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcaccctcttcacttcaccaaaatcatcatcat 42473371  T
Q  304 catcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaacgttgttttccattcactcttgttcg 403  Q
    || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| | |||||||||||||  |||||||    
T  42473370 caccggcgatcatccttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtaacgccattcaacttcgttttccattcaccgttgttcg 42473271  T
Q  404 ttt 406  Q
    |||    
T  42473270 ttt 42473268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 100 - 410
Target Start/End: Complemental strand, 32135775 - 32135464
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctct-attaccatt 198  Q
    |||||||||||||||| ||||||||||||| ||||||||| ||||||| ||||||| |  |||||||||||||||||||||||||||||| |||| ||||    
T  32135775 gtgtacaaggactaaattgatggaaatagtaaaaattcgagatttaacttttcagtgtaatttttcctgtgtttccaattatacccctcttattatcatt 32135676  T
Q  199 cactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatc 298  Q
      |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||| |||||||||||    
T  32135675 gcctttcatcctcacattttcactcaaaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcaccctctccgcttctccaaaatcatc 32135576  T
Q  299 atcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaacgttgttttccattcactctt 398  Q
    ||||||| |||| ||||  ||| |||||||| ||||||||||||||| |||  |||||||||||||||  |||||||||| | |||||||||||||||||    
T  32135575 atcatcaccggcaatcaaccttagaaaagatacggttttgaagtcagtttttttggtttgtcaaggtaacgccattcaacttcgttttccattcactctt 32135476  T
Q  399 gttcgtttctcc 410  Q
    ||||||||||||    
T  32135475 gttcgtttctcc 32135464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 2854263 - 2854160
Alignment:
Q  91 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  2854263 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcagtat-ttttttcctgtgtttccaattatacccctcta 2854165  T
Q  191 ttacc 195  Q
    |||||    
T  2854164 ttacc 2854160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 91 - 194
Target Start/End: Complemental strand, 24541146 - 24541043
Alignment:
Q  91 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    ||||||||  ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  24541146 gtcagccacatgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcagtcttttttttcctatgtttccaattatacccctcta 24541047  T
Q  191 ttac 194  Q
    ||||    
T  24541046 ttac 24541043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 34327826 - 34327927
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| ||||||| |||| || |  |||||||||||||||||||||||||||||||||    
T  34327826 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcggtgtaatttttcctgtgtttccaattatacccctctatt 34327925  T
Q  193 ac 194  Q
    ||    
T  34327926 ac 34327927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 8539866 - 8539968
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||| ||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |  |||||| ||||||||||||||||||||||||||    
T  8539866 cagccacgtgtgcaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcatgtgtttccaattatacccctctatt 8539965  T
Q  193 acc 195  Q
    |||    
T  8539966 acc 8539968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 93 - 190
Target Start/End: Original strand, 17574508 - 17574605
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| | ||||| ||||||| |  |||||||||||||||||||||||||||||||    
T  17574508 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcagtataatttttcctgtgtttccaattatacccctcta 17574605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 2854392 - 2854303
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 91  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||  ||||||||||| |||| |||| ||| |||||||||||||    
T  2854392 tttttcgaaa-atcaaattagtccctgaattttacagacgtccaacaaattcgtccctccgtccaaaaggtccattaatagtgatgatgtg 2854303  T

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Target: chr5; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 93 - 190
Target Start/End: Original strand, 7268033 - 7268130
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| | ||||| ||||| | |  |||||||||||||||||||||||||||||||    
T  7268033 cagccacgtgtacaaggactaaattgatggaaattgtaaaaattcgaaacttaacttttcaatataatttttcctgtgtttccaattatacccctcta 7268130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 93 - 187
Target Start/End: Original strand, 21841182 - 21841276
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 187  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| | ||||| ||||| | |  ||||||||||||||||||||||||||||    
T  21841182 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcaatataatttttcctgtgtttccaattatacccct 21841276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 17574376 - 17574468
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  ||||||||| ||||||| |||||    
T  17574376 ttttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc 17574468  T

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Target: chr5; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 24541278 - 24541187
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa-tcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 91  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| |||   |||||||| |||| |||  ||| |||||||||||||    
T  24541278 ttttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattcatctcctccgtccaaaaggtctattaatagtgatgatgtg 24541187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 100 - 185
Target Start/End: Complemental strand, 18624934 - 18624849
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattataccc 185  Q
    |||||||||||||||  |||||||||| || ||||||||| ||||||| ||||||| || |||||  |||||||||||||||||||    
T  18624934 gtgtacaaggactaatttgatggaaatggtaaaaattcgagatttaacttttcagtgtcattttttatgtgtttccaattataccc 18624849  T

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Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 36057679 - 36057586
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtca 94  Q
    |||| ||||||||| | |||| |||||||||||||||||||||||||||   ||||||||||| ||||  ||||||| | ||||||||||||||    
T  36057679 ttttgcgaaatatctatttagaccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttaatggtgatgatgtgtca 36057586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 7267901 - 7267993
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||    |||||||||| ||||  ||||||||| ||||||| |||||    
T  7267901 ttttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatgatccctccgtccaaaagctccgttagtggtgatgacgtgtc 7267993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 30468346 - 30468254
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||| ||||||||||||||||||||||||   ||||||||||| ||||  ||||||||| ||||||| |||||    
T  30468346 ttttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc 30468254  T

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Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 34327693 - 34327785
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||   ||| ||||||| ||||  || |||||| |||||||||||||    
T  34327693 ttttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtctctccgtccaaaagctctgttagtggtgatgatgtgtc 34327785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 18625068 - 18624982
Alignment:
Q  7 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||||||| | |||||||||||||||||||  |||||||||||   |||| |||||| ||||  |||||||||||||||||||||||    
T  18625068 gaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttagtagtgatgatgtgtc 18624982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 12737329 - 12737429
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||| |||| || ||||| | |  |||||| |||| |||||||||||||||||||||    
T  12737329 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttgacttttcaatgtaatttttcatgtg-ttccaattatacccctctatt 12737427  T
Q  193 ac 194  Q
    ||    
T  12737428 ac 12737429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 100 - 194
Target Start/End: Complemental strand, 30468206 - 30468113
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattac 194  Q
    |||||||||||||||  |||||||||| || |||||| || ||||||| ||||||| |  |||||| |||| ||||||||||||||| |||||||    
T  30468206 gtgtacaaggactaatttgatggaaatggtaaaaatttgagatttaacttttcagtgtaatttttcatgtg-ttccaattataccccgctattac 30468113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 12800152 - 12800252
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||||||||||||  |||||| ||| || ||||||||| |||| || ||||| | |  |||||| |||| |||||||||||||||||||||    
T  12800152 cagccacgtgtacaaggactaatttgatggcaatggtaaaaattcgagatttgacttttcaatgtaatttttcatgtg-ttccaattatacccctctatt 12800250  T
Q  193 ac 194  Q
    ||    
T  12800251 ac 12800252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27075878 - 27075927
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 50  Q
    |||||| ||||||||||||||| ||||||||| |||||||||||||||||    
T  27075878 tttttcaaaatatcaaattagttcctgaatttaacagacgtccatcaaat 27075927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 8539733 - 8539825
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||||||  |||| |||| || ||||  |||||||||  ||||| ||||||    
T  8539733 ttttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatagtcgctccatccaaaagctccgttagtgttgatggtgtgtc 8539825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 18728663 - 18728606
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    ||||||||||| |||||||||||||||  |||||||||||||||   |||||||||||    
T  18728663 cgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtc 18728606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 21843023 - 21842962
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  21843023 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 21842962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 32087577 - 32087634
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    ||||||||||| ||||||||| |||||| |||||||||||||||   |||||||||||    
T  32087577 cgaaatatcaacttagtcccttaatttttcagacgtccatcaaaaaggtccctccgtc 32087634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40782242 - 40782181
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    ||||||||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  40782242 tttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 40782181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 2179851 - 2179931
Alignment:
Q  7 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 87  Q
    |||||||| | ||| |||||||||||||||||| |||||||||   ||||||||||| ||||  ||| ||||| |||||||    
T  2179851 gaaatatctatttaatccctgaattttacagacatccatcaaaatggtccctccgtccaaaagctccattagtggtgatga 2179931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2852944 - 2853005
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| ||||||||||||||||| |||||||||   | | ||| |||||||||||||||||||    
T  2852944 ttttgcgaaatatcaaattagttcctgaatttacaaaatgtcaatcaaatcagtccctccgt 2853005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 29620196 - 29620257
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    ||||||||||||||||||||||| ||||||||   | | ||| ||||||| |||||||||||    
T  29620196 tttttcgaaatatcaaattagtctctgaatttacaaaatgtcaatcaaattagtccctccgt 29620257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 43318121 - 43318064
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    ||||||||||| |||||||||||||||  ||||||||||| |||   |||||||||||    
T  43318121 cgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaaggtccctccgtc 43318064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 346; Significance: 0; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 1 - 406
Target Start/End: Original strand, 37020566 - 37020971
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtcagccatg 100  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| |    
T  37020566 ttttttgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagccacg 37020665  T
Q  101 tgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattca 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37020666 tgtacaaggactaaactgatggaaattgtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattca 37020765  T
Q  201 ctttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcat 300  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  37020766 ctttcatcctcacattttcactcagaagcatcacacaagtccctaacctttcaccttcccgcctaaactgtcaccctcttcacttcaccaaaatcatcat 37020865  T
Q  301 catcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaacgttgttttccattcactcttgt 400  Q
    ||||| |||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  37020866 catcaccggcgatcatccttggaaaagattcggttttgaagttagattttgtggtttgtcaaggtatagccattaaactttgttttccattcactcttgt 37020965  T
Q  401 tcgttt 406  Q
    ||||||    
T  37020966 tcgttt 37020971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 7 - 406
Target Start/End: Complemental strand, 6786061 - 6785662
Alignment:
Q  7 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtcagccatgtgtaca 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||  ||||||||||||||||||| || ||||    
T  6786061 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtccaaaatgtctgttaacagtgatgatgtgtcagccacgtataca 6785962  T
Q  107 aggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattcactttca 206  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  6785961 aggactaaactgatggaaatggtcaaaatttgatatttaacatttcagtctcatttttcctgtgttttcaattatacccctctattaccattcactttca 6785862  T
Q  207 tcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatcat 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6785861 tcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcaccctcttcacttcaccaaaatcatcatcatcat 6785762  T
Q  307 cggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaacgttgttttccattcactcttgttcgttt 406  Q
    |||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  6785761 cggcgatcatccttggaaaagattcagttttcaagtcagatttcgtggtttgtcaaggtatagacattcaactttgttttccattcactcttgttcgttt 6785662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 4 - 406
Target Start/End: Complemental strand, 24208125 - 24207732
Alignment:
Q  4 ttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtcagccatgtgt 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||           | ||||||||||||||||| ||||    
T  24208125 ttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtccaaaaac---------aatgatgatgtgtcagccacgtgt 24208035  T
Q  104 acaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattcactt 203  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24208034 acaaggactaaactgatggaaatggtcaaaattcgatatttaacatttcagtctcatttttcctgtgtttccaattatacccctctattaccattcactt 24207935  T
Q  204 tcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcat 303  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24207934 tcatcctcacattttcactcagaagcatcaaacaagtccataacctttcaccttcccgcctaaaccgtcaccctcttcacttcaccaaaatcatcatcat 24207835  T
Q  304 catcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaacgttgttttccattcactcttgttcg 403  Q
    || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  24207834 caccggcgatcatccttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagacattcaactttgttttccattcactcttgttcg 24207735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 17696397 - 17696499
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    ||||||||||||||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |  |||||||||| ||| ||||||||||||||||||    
T  17696397 cagccatgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctgtcttttcaattatacccctctatt 17696496  T
Q  193 acc 195  Q
    |||    
T  17696497 acc 17696499  T

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Target: chr2; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 100 - 194
Target Start/End: Original strand, 2767132 - 2767226
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattac 194  Q
    ||||||| ||| |||| ||||||||||||| ||||||||| ||||||| ||||||| |  |||||||||||||||||||||||||||||||||||    
T  2767132 gtgtacatggattaaattgatggaaatagtaaaaattcgagatttaacttttcagtataatttttcctgtgtttccaattatacccctctattac 2767226  T

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Target: chr2; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 6797698 - 6797800
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||||||||||||| ||||| |||| || ||||||||| ||||||| ||||||| |  |||||||||||||||||||||||||||| ||||    
T  6797698 cagccacgtgtacaaggactaaattgatgaaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctgtgtttccaattatacccctttatt 6797797  T
Q  193 acc 195  Q
    |||    
T  6797798 acc 6797800  T

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Target: chr2; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 40560414 - 40560516
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||||||||||||| |||||||||| || ||||||| | ||||||| ||||||| |  |||||| ||||||||||||||||||||||||||    
T  40560414 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcaagatttaacttttcagtgtaatttttcttgtgtttccaattatacccctctatt 40560513  T
Q  193 acc 195  Q
    |||    
T  40560514 acc 40560516  T

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Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 39664834 - 39664742
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  ||||||||| |||||||||||||    
T  39664834 ttttacgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgtgtc 39664742  T

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Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 40560281 - 40560373
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||  |||||||||||| ||||  || |||||| |||||||||||||    
T  40560281 ttttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatagtccctccgtccaaaagttctgttagtggtgatgatgtgtc 40560373  T

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Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 100 - 194
Target Start/End: Complemental strand, 42519151 - 42519056
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacattt-cagtctcttttttcctgtgtttccaattatacccctctattac 194  Q
    |||||||||||||||| |||||||||| || ||||||| | ||||||| ||| |||| |  |||||||||||||||||||||||||||||||||||    
T  42519151 gtgtacaaggactaaattgatggaaatggtaaaaattcaagatttaactttttcagtgtaatttttcctgtgtttccaattatacccctctattac 42519056  T

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Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 93 - 190
Target Start/End: Original strand, 16763266 - 16763363
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||| |||||||||||||||| ||||| |||| || ||||||||| | ||||| ||||||| |  |||||| ||||||||||||||||||||||||    
T  16763266 cagccacgtgtacaaggactaaattgatgaaaatggtaaaaattcgagacttaacttttcagtataatttttcatgtgtttccaattatacccctcta 16763363  T

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Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 19908199 - 19908099
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||| |||| || ||||| | |  |||||||||||||| ||||||||||||||||||    
T  19908199 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttgacttttcaatgtaatttttcctgtgttt-caattatacccctctatt 19908101  T
Q  193 ac 194  Q
    ||    
T  19908100 ac 19908099  T

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Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 42519284 - 42519199
Alignment:
Q  8 aaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    ||||||| | ||||||||||||||||||||||||||||||||   |||||||| || ||||  ||||||||| |||||||||||||    
T  42519284 aaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagctccgttagtggtgatgatgtgtc 42519199  T

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Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 2766992 - 2767084
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||||||||| ||||||   ||||||| ||| ||||  ||||||||| |||||||||||||    
T  2766992 ttttgcgaaatatctatttagtccctgaattttacagacgtctatcaaaatggtccctctgtccaaaagctccgttagtggtgatgatgtgtc 2767084  T

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Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 16763134 - 16763226
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||| || |||||| | ||||| |||||    
T  16763134 ttttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaatctctgttagtggcgatgacgtgtc 16763226  T

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Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 39455371 - 39455454
Alignment:
Q  104 acaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 187  Q
    |||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |  |||||  |||||||||||||||||||||    
T  39455371 acaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttattgtgtttccaattatacccct 39455454  T

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Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 100 - 187
Target Start/End: Complemental strand, 44709691 - 44709604
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 187  Q
    |||||||||||||||| |||||||||| || |||||| || ||||||| ||||||| |  |||||||||||||| ||| |||||||||    
T  44709691 gtgtacaaggactaaattgatggaaatggtaaaaatttgaaatttaacttttcagtataatttttcctgtgttttcaactatacccct 44709604  T

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Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 14389170 - 14389078
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | |||||||||||||||| || | ||||||||||   ||||||||||| ||||  | |||||||||||||||||||||    
T  14389170 ttttgcgaaatatctatttagtccctgaattttccaaatgtccatcaaaatggtccctccgtccaaaagtttcgttagtagtgatgatgtgtc 14389078  T

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Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 19908332 - 19908240
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||| |||||||||||||||||| |||||   ||||||||||| ||||  ||||||||| ||||||| |||||    
T  19908332 ttttgcgaaatatctatttagtccttgaattttacagacgtccgtcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc 19908240  T

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Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 44709831 - 44709739
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||| | | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  | ||||||| |||||||| ||||    
T  44709831 ttttgcgaaataactatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagcttcgttagtggtgatgatatgtc 44709739  T

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Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 17696271 - 17696357
Alignment:
Q  8 aaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtca 94  Q
    ||||||| | ||||||||||||||||||| ||||| ||||||   ||| ||||||| ||||  ||||||||| ||||||||||||||    
T  17696271 aaatatctatttagtccctgaattttacaaacgtcaatcaaaatggtcactccgtccaaaagctccgttagtggtgatgatgtgtca 17696357  T

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Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 202 - 304
Target Start/End: Original strand, 40097848 - 40097948
Alignment:
Q  202 tttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatc 301  Q
    ||||||||||||||||| | ||| || ||||||||| |||||| ||||||| |||||||||   |||| ||||| ||||||| || ||||||||||||||    
T  40097848 tttcatcctcacatttt-agtcataa-catcaaacatgtccctgacctttctccttcccgctagaaccttcatcatcttcacctctccaaaatcatcatc 40097945  T
Q  302 atc 304  Q
    |||    
T  40097946 atc 40097948  T

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Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 11023074 - 11023001
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 79  Q
    |||||||||||| ||||||||||||||    |||||||||||| || ||||||||||| |||| ||||||||||    
T  11023074 cgaaatatcaaaatagtccctgaatttgtttgacgtccatcaattccgtccctccgtccaaaaggtccgttagt 11023001  T

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Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 16377276 - 16377192
Alignment:
Q  8 aaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgt 92  Q
    ||||||| | ||||||| ||||||||||| ||||||||||||   ||||||||||| ||||  ||||||||| ||||||| ||||    
T  16377276 aaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgt 16377192  T

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Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 11315148 - 11315073
Alignment:
Q  229 catcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatc 304  Q
    ||||||||| |||||| ||||||| |||||| ||  ||||| ||||| ||||||| || |||||||||||||||||    
T  11315148 catcaaacacgtccctgacctttctccttcctgctaaaaccttcatcatcttcacctctccaaaatcatcatcatc 11315073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 14389037 - 14388975
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagt 155  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||| ||||||| |||||||    
T  14389037 cagccacgtgtacaaggactaacttgatggaaatggtaaaaattcgagatttaacttttcagt 14388975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24205656 - 24205717
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    ||||||||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  24205656 tttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 24205717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37022216 - 37022155
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    ||||||||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  37022216 tttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 37022155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 39664701 - 39664601
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||| |||| || ||||  | |  |||||| |||| ||||||||||||||| |||||    
T  39664701 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttgacttttccatgtaatttttcatgtg-ttccaattataccccgctatt 39664603  T
Q  193 ac 194  Q
    ||    
T  39664602 ac 39664601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 304
Target Start/End: Complemental strand, 4416785 - 4416688
Alignment:
Q  205 catcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatc 304  Q
    |||||||||||||| | |||||| ||||||| | |||||| ||||||| |||| ||||  || || ||||| ||||||| || |||||||||||||||||    
T  4416785 catcctcacatttt-agtcagaa-catcaaaaacgtccctgacctttctcctttccgctaaatccttcatcatcttcacctctccaaaatcatcatcatc 4416688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 37417336 - 37417379
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaa 49  Q
    ||||||||||| |||||||||||||||  |||||||||||||||    
T  37417336 cgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 37417379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 39455234 - 39455317
Alignment:
Q  8 aaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 91  Q
    ||||||| | ||||||| ||||||||||||||||||||||||   ||| ||||||  ||||  ||||||||| | |||||||||    
T  39455234 aaatatctatttagtccatgaattttacagacgtccatcaaaatggtctctccgttcaaaagctccgttagtggcgatgatgtg 39455317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2577511 - 2577450
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    ||||| ||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  2577511 ttttttgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 2577450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4046354 - 4046403
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaat 50  Q
    ||||| ||||||||||||||||| || ||||| |||| ||||||||||||    
T  4046354 ttttttgaaatatcaaattagtctctaaatttaacagtcgtccatcaaat 4046403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 11315396 - 11315339
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    |||||||||||| |||| |||||||||  |||||||||||||||   |||||||||||    
T  11315396 cgaaatatcaaaatagttcctgaatttgtcagacgtccatcaaaatggtccctccgtc 11315339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 14387407 - 14387468
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  14387407 ttttacgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaataagtccctccgt 14387468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 16764642 - 16764581
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||| ||||||||||||    
T  16764642 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaaccagtccctccgt 16764581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 26584882 - 26584821
Alignment:
Q  2 ttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    ||||| ||||||||||||| ||||| ||||| | |||||||||||||||   ||||||||||    
T  26584882 ttttcaaaatatcaaattaatccctcaatttaatagacgtccatcaaattcatccctccgtc 26584821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 29909721 - 29909664
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    ||||||||||| ||||||||| |||||  |||||||||||||||   |||||||||||    
T  29909721 cgaaatatcaatttagtcccttaatttgtcagacgtccatcaaaaaggtccctccgtc 29909664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6797565 - 6797613
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaa 49  Q
    |||| ||||||||| | ||||||||| ||||||||||||||| ||||||    
T  6797565 ttttgcgaaatatctatttagtcccttaattttacagacgtctatcaaa 6797613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 342; Significance: 0; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 1 - 406
Target Start/End: Complemental strand, 32455957 - 32455552
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtcagccatg 100  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||| |    
T  32455957 tttttcgaaatatcaaattagtcactgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaataatgatgatgtgtcagccacg 32455858  T
Q  101 tgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattca 200  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32455857 tgtacaaggactaaactgatggaaattatcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattca 32455758  T
Q  201 ctttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcat 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  32455757 ctttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaactgttaccctcttcacttcaccaaaatcatcat 32455658  T
Q  301 catcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaacgttgttttccattcactcttgt 400  Q
    ||||| |||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32455657 catcaccggcgatcatccttggaaaagattcgattttgaagtcagattttgtggtttgtcaaggtatagccattcaactttgttttccattcactcttgt 32455558  T
Q  401 tcgttt 406  Q
    ||||||    
T  32455557 tcgttt 32455552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 3456806 - 3457110
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtcagccatg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||| |||||||||| ||||||||| |    
T  3456806 tttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatatccgttaatagtgatgatatgtcagccacg 3456905  T
Q  101 tgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattca 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3456906 tgtacaaggactaaactgatggaaattgtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattca 3457005  T
Q  201 ctttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcat 300  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  3457006 ctttcatcctcacattttcactcataagcatcaaacaagtccctaacctttcaccttcccgcctaaactgtcaccctcttcacttcaccaaaatcatcat 3457105  T
Q  301 catca 305  Q
    |||||    
T  3457106 catca 3457110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 91 - 410
Target Start/End: Complemental strand, 13613517 - 13613198
Alignment:
Q  91 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    ||||||||||||||||||||||||| |||||||||| || ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13613517 gtcagccatgtgtacaaggactaaattgatggaaattgtaaaaattcgagatttaacatttcagtctcttttttcctgtgtttcaaattatacccctcta 13613418  T
Q  191 ttaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcacca 290  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||    
T  13613417 ttaccattttctttcatcctcacattttcactcagaaccatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcaccctctacacttctcca 13613318  T
Q  291 aaatcatcatcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaacgttgttttccat 390  Q
    |||| || ||||||| |||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||   ||||||||| |||||||||||    
T  13613317 aaattattatcatcaccggcgatcaaccttggaaaatattcggttttgaagtcagatttcgtggtttgtcaaggtaacaccattcaactttgttttccat 13613218  T
Q  391 tcactcttgttcgtttctcc 410  Q
    ||||| ||||| ||||||||    
T  13613217 tcacttttgtttgtttctcc 13613198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 13613648 - 13613558
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 91  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||| ||||| |||||||||||    
T  13613648 ttttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattagtccctccgtccaaaaggtccattagtggtgatgatgtg 13613558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 20523557 - 20523658
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||||||||||||| ||||| |||| || ||||||||| ||||||| ||||||| |  |||||||||||||||||||||||||||||||||    
T  20523557 cagccacgtgtacaaggactaaattgatgaaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctgtgtttccaattatacccctctatt 20523656  T
Q  193 ac 194  Q
    ||    
T  20523657 ac 20523658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 20523424 - 20523516
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  || |||||| |||||||||||||    
T  20523424 ttttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttctgttagtggtgatgatgtgtc 20523516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 32439157 - 32439065
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  || |||||||||||||| |||||    
T  32439157 ttttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagatctgttagtagtgatgacgtgtc 32439065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 10568474 - 10568549
Alignment:
Q  18 ttagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    ||||||||||||||||||||||||| ||||||  |||||||||||| ||||  ||||||||| |||||||||||||    
T  10568474 ttagtccctgaattttacagacgtctatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgtgtc 10568549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 93 - 187
Target Start/End: Original strand, 9398851 - 9398945
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 187  Q
    |||||| |||||||||||||||| ||||||||||  | ||||||||| ||||||| ||||||| |  |||||| |||||| ||||||||||||||    
T  9398851 cagccacgtgtacaaggactaaattgatggaaattataaaaattcgagatttaacttttcagtgtaatttttcttgtgttgccaattatacccct 9398945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 100 - 190
Target Start/End: Complemental strand, 32439010 - 32438920
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||||||||||||| |||||||||| || ||| ||||| | ||||| ||||| | |  |||||||||||||||||||||||||||||||    
T  32439010 gtgtacaaggactaaattgatggaaatggtaaaatttcgagacttaacttttcaatataatttttcctgtgtttccaattatacccctcta 32438920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 9398718 - 9398811
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtca 94  Q
    |||| ||||||||| | ||||||||||||||||| |||||| |||||||   ||||||||||| ||||  ||||||||| ||||||||||||||    
T  9398718 ttttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgttagtggtgatgatgtgtca 9398811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 11355413 - 11355513
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||| ||||||| ||||||| |  ||||||||||| ||||||||||||| | |||||    
T  11355413 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctgtg-ttccaattatacctcgctatt 11355511  T
Q  193 ac 194  Q
    ||    
T  11355512 ac 11355513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 7049828 - 7049907
Alignment:
Q  14 caaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||||| |||||||||||||||||||||||||||||   ||||||||||| ||||  |||||| || |||||||||||||    
T  7049828 caaattcgtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttcgtggtgatgatgtgtc 7049907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 304
Target Start/End: Complemental strand, 25171975 - 25171832
Alignment:
Q  160 tttttcctgtgtttccaattatacccctctatta-ccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttc 258  Q
    |||||||||| ||||||| | ||||||||||||| |||| |  || |||||||||| ||||| |||||| | ||||| | |||||| ||||||| |||||    
T  25171975 tttttcctgtttttccaaatttacccctctattacccatacctttccatcctcaca-tttcagtcagaa-cctcaaaaacgtccctgacctttctccttc 25171878  T
Q  259 ccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatc 304  Q
    ||||  ||||| ||||| ||||||| || |||||||||| ||||||    
T  25171877 ccgctaaaaccttcatcatcttcacctctccaaaatcattatcatc 25171832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 7373024 - 7372933
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgt 92  Q
    |||| ||||||||  | |||||||||||||||||||| |||||||||||   ||||||||||| ||||  ||| ||||| ||||||||||||    
T  7373024 ttttgcgaaatatttatttagtccctgaattttacaggcgtccatcaaaatggtccctccgtccaaaagctccattagtggtgatgatgtgt 7372933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 191
Target Start/End: Original strand, 7049955 - 7050046
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctat 191  Q
    |||||||||||||||  |||||||||| || ||||||  |  || ||| ||||||| || ||||| | ||||||||||||||||||||||||    
T  7049955 gtgtacaaggactaatttgatggaaatggtaaaaattgcagtttgaacttttcagtgtcattttttccgtgtttccaattatacccctctat 7050046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 6899549 - 6899635
Alignment:
Q  7 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||||||| | ||||||||| |||||||||||| |||||||||   |||||| |||| ||||  |||||||||  ||||||||||||    
T  6899549 gaaatatctatttagtccctaaattttacagacatccatcaaaatggtcccttcgtccaaaagctccgttagtgttgatgatgtgtc 6899635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 187
Target Start/End: Original strand, 32517068 - 32517162
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 187  Q
    |||||| ||||| |||||||||| |||||||||| || |||||| || ||||||| |||||   |  |||||  |||||||||||||||||||||    
T  32517068 cagccacgtgtataaggactaaattgatggaaatggtaaaaatttgagatttaacttttcatagtaatttttgttgtgtttccaattatacccct 32517162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 17952103 - 17952030
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 79  Q
    |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  17952103 cgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 17952030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 32454306 - 32454367
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    ||||||||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  32454306 tttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 32454367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32518528 - 32518467
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  32518528 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 32518467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 3018493 - 3018450
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaa 49  Q
    ||||||||||| |||||||||||||||  |||||||||||||||    
T  3018493 cgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 3018450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 187
Target Start/End: Original strand, 10568598 - 10568684
Alignment:
Q  101 tgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 187  Q
    ||||||||||||||  |||||||||| || ||||||  |  |||||| ||| ||| || ||||| | ||||||||||||||||||||    
T  10568598 tgtacaaggactaatttgatggaaatggtaaaaattgcaattttaactttttagtgtcattttttccgtgtttccaattatacccct 10568684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 32516960 - 32517026
Alignment:
Q  26 tgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgt 92  Q
    ||||||||||| ||||||||||||   ||||||||||| ||||  ||||||||| ||||||| ||||    
T  32516960 tgaattttacatacgtccatcaaaattgtccctccgtccaaaagctccgttagtggtgatgacgtgt 32517026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 3480688 - 3480627
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    ||||||||||||||||| ||||||||||||||   | | ||| ||||||| |||||||||||    
T  3480688 tttttcgaaatatcaaactagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 3480627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18645135 - 18645074
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| ||||||||||||||||||| |||||||   | | ||| |||||||||||||||||||    
T  18645135 ttttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatcaaatcagtccctccgt 18645074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 334; Significance: 0; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 1 - 406
Target Start/End: Complemental strand, 47013148 - 47012743
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtcagccatg 100  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| |    
T  47013148 tttttcgaaatatcaaattagtccctgaattttgcaaacgtccatcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgtgtcagccacg 47013049  T
Q  101 tgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattca 200  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  47013048 tgtacagggactaaactgatggaaattgtcaaaatttgatatttaacatttcagtctcttttttcctgtgttttcaattatacccttctattaccattca 47012949  T
Q  201 ctttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcat 300  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  47012948 ctttcatcctcacattttcactcagaagcatcatacaagtccctaacctttcaccttcccgcctaaactgtcaccctcttcacttcaccaaaatcatcat 47012849  T
Q  301 catcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaacgttgttttccattcactcttgt 400  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  47012848 catcatcggcgatcatccttggaaaagattcggttttgaagtcagattttgtggtttgtcaaggtatagccatttaactttgttttccattcactcttgt 47012749  T
Q  401 tcgttt 406  Q
    ||||||    
T  47012748 tcgttt 47012743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 21 - 406
Target Start/End: Original strand, 1442599 - 1442983
Alignment:
Q  21 gtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtcagccatgtgtacaaggactaaactgat 120  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| |||||||||||||||||||||    
T  1442599 gtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaacagtgatgatgtgtcagccacgtgtacaaggactaaactgat 1442698  T
Q  121 ggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattcactttcatcctcacattttca 220  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1442699 ggaaattgtcaaaattcgatatttaacatttcagtctcttttt-cctatgtttccaattatacccctctattaccattcactttcatcctcacattttca 1442797  T
Q  221 ctcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatcatcggcgatcatgctt 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||| |||    
T  1442798 ctcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaactgtcaccctcttcacttcaccaaaatcatcatcatcaccggcgatcatcctt 1442897  T
Q  321 ggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaacgttgttttccattcactcttgttcgttt 406  Q
    | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1442898 gcaaaagattcggttttgaagtcagattttgtggtttgtcaaggtatagccattcaactttgttttccattcactcttgttcgttt 1442983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 406
Target Start/End: Complemental strand, 9121734 - 9121342
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtcagccatg 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |      
T  9121734 tttttcgaaatatcaaattagtccctgaattttgcagacgtccatcaaatcagtccctccgtccaaaatgtccgttaatagtgatgatgtgtcagcaaca 9121635  T
Q  101 tgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattca 200  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9121634 tgtacaaggactaaactgatggaaattgtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattca 9121535  T
Q  201 ctttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcat 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||    
T  9121534 ctttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaactgtaaccctcttcacttcaccaaaatcatcat 9121435  T
Q  301 catcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaacgttgttttccattcactcttgt 400  Q
    ||||| |||||||||| ||||||||||||||||||||             |||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  9121434 catcaccggcgatcatccttggaaaagattcggtttt-------------gtggtttgtcaaggtatagccattaaactttgttttccattcactcttgt 9121348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 91 - 410
Target Start/End: Complemental strand, 33602579 - 33602261
Alignment:
Q  91 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33602579 gtcagccatgtgtacaaggactaaattgatggaaatagtcaaaattcgagatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 33602480  T
Q  191 ttaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcacca 290  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  33602479 ttaccattgtctttcatcctcacattttcactcataagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcaccctattcacttcacca 33602380  T
Q  291 aaatcatcatcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaacgttgttttccat 390  Q
    ||||||||||||||| || ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  33602379 aaatcatcatcatcaccgacgatcatccttggaaaagattcagttttgaagtcagatttcgtggtttgtcaaggtaacgccattcaactttgttttccat 33602280  T
Q  391 tcactcttgttcgtttctcc 410  Q
    ||||||||| ||||||||||    
T  33602279 tcactcttg-tcgtttctcc 33602261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 51896218 - 51896017
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtca------ 94  Q
    |||| ||||||||| | ||||||||||||||||||||| ||||||||||  |||||||||||| ||||  || |||||| |||||||||||||           
T  51896218 ttttgcgaaatatctatttagtccctgaattttacagatgtccatcaaaatagtccctccgtccaaaagctctgttagtggtgatgatgtgtcctcttgc 51896119  T
Q  95 --gccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
      |||| |||||||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |  ||||||| || ||||||||||||||||||||||    
T  51896118 atgccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcccgtatttccaattatacccctctatt 51896019  T
Q  193 ac 194  Q
    ||    
T  51896018 ac 51896017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 91 - 195
Target Start/End: Complemental strand, 46583491 - 46583387
Alignment:
Q  91 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||||| |||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  46583491 gtcagccacgtgtacaaggactaaattgatgaaaatggtcaaaattcgatatttaacatttcagtctctcttttcatgtgttttcaattatacccctcta 46583392  T
Q  191 ttacc 195  Q
    |||||    
T  46583391 ttacc 46583387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 33602704 - 33602620
Alignment:
Q  7 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 91  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||| ||||||||||| ||||||||||    
T  33602704 gaaatatcaaattagtccctgaattttacagacgtccgtcaaattagtccctccgtccaaaaggtccgttagtaatgatgatgtg 33602620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 46583622 - 46583532
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 91  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||| |||||||| | |||||||||||    
T  46583622 ttttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatttgtccctccgtccaaaaggtccgttaatggtgatgatgtg 46583532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 101 - 195
Target Start/End: Original strand, 2869778 - 2869872
Alignment:
Q  101 tgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattacc 195  Q
    ||||||||||||||| ||||||||||||| |||||| || |||| || ||||||| |  ||||||||||||||||||||||||||||||||||||    
T  2869778 tgtacaaggactaaattgatggaaatagtaaaaatttgagatttgacttttcagtgtaatttttcctgtgtttccaattatacccctctattacc 2869872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 93 - 190
Target Start/End: Complemental strand, 34778072 - 34777975
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| | ||||| ||||||| |  |||||||||||||||||||||||||||||||    
T  34778072 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcagtataatttttcctgtgtttccaattatacccctcta 34777975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 4856032 - 4855940
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||  ||||||| | ||||||| |||||    
T  4856032 ttttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttaatggtgatgacgtgtc 4855940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 93 - 185
Target Start/End: Original strand, 15104632 - 15104724
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattataccc 185  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||| ||||||| ||||||| || ||||| ||||||||||||||||||||    
T  15104632 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttaacttttcagtgtcattttttctgtgtttccaattataccc 15104724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 34778204 - 34778112
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||   ||||||||||| ||||  ||||||||| ||||||| |||||    
T  34778204 ttttgcgaaatatcaaattagtccctgaattttacagatgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc 34778112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 101 - 190
Target Start/End: Complemental strand, 26225479 - 26225390
Alignment:
Q  101 tgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    ||||||||||||||| |||||||||| || ||||||||| | ||||| ||||| | |  |||||||||||||||||||||||||||||||    
T  26225479 tgtacaaggactaaattgatggaaatggtaaaaattcgaaacttaacttttcaatataatttttcctgtgtttccaattatacccctcta 26225390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 31238428 - 31238328
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||| ||||||| ||||||| |  ||||||||||| ||||||||||||||| |||||    
T  31238428 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctgtg-ttccaattataccccgctatt 31238330  T
Q  193 ac 194  Q
    ||    
T  31238329 ac 31238328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 93 - 193
Target Start/End: Complemental strand, 3013403 - 3013303
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||||||||||||| |||||||||| || |||||| || ||||||| ||||||| |  |||||||||||||| |||||||| | |||||||    
T  3013403 cagccacgtgtacaaggactaaattgatggaaatggtaaaaatttgagatttaacttttcagtgtaatttttcctgtgttttcaattataactctctatt 3013304  T
Q  193 a 193  Q
    |    
T  3013303 a 3013303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 93 - 190
Target Start/End: Original strand, 27087473 - 27087570
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||| ||||||||||||| || |||||||||| || ||||||||| | ||||| ||||| | |  ||||||||||||||||||||||| |||||||    
T  27087473 cagccacgtgtacaaggactgaattgatggaaatggtaaaaattcgagacttaacttttcaatataatttttcctgtgtttccaattatatccctcta 27087570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 15104499 - 15104591
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||   |||| |||||| ||||  ||| ||||| |||||||||||||    
T  15104499 ttttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaaagctccattagtggtgatgatgtgtc 15104591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 6818737 - 6818658
Alignment:
Q  8 aaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 87  Q
    ||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  6818737 aaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6818658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 2869637 - 2869730
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtca 94  Q
    |||| ||||||||| | |||||| || ||||||||||||||||||||||   ||||||||||| ||||  || |||||| ||||||||||||||    
T  2869637 ttttgcgaaatatctatttagtctctaaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtca 2869730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 27087341 - 27087433
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||||||   | || |||||| ||||  ||||||||| |||||||||||||    
T  27087341 ttttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggcccatccgtccaaaagctccgttagtggtgatgatgtgtc 27087433  T

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Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 31238561 - 31238469
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||   |||| || ||| ||||  ||||||||| ||||||| |||||    
T  31238561 ttttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccatctgtccaaaagctccgttagtggtgatgacgtgtc 31238469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 190
Target Start/End: Complemental strand, 4855893 - 4855805
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||||||||||||| |||||||||| || |||||| || | ||||| ||||||| |  |||||||  ||||||||||||||||||||||    
T  4855893 gtgtacaaggactaaattgatggaaatggtaaaaatttgagacttaacttttcagtataatttttcc--tgtttccaattatacccctcta 4855805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 6818611 - 6818511
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||||||||||||  |||| ||||| || |||||| || ||||||| ||||||| |  ||||||||||| |||||||||||| || |||||    
T  6818611 cagccacgtgtacaaggactaatttgatagaaatggtaaaaatttgagatttaacttttcagtgtaatttttcctgtg-ttccaattatactccgctatt 6818513  T
Q  193 ac 194  Q
    ||    
T  6818512 ac 6818511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 50556163 - 50556078
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatg 86  Q
    |||| ||||||||| | ||||||||| ||||||||||||||| ||||||   ||||||||||| ||||  ||||||||| ||||||    
T  50556163 ttttgcgaaatatctatttagtccctaaattttacagacgtctatcaaaatggtccctccgtccaaaagctccgttagtggtgatg 50556078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 3013542 - 3013447
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtc------catcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 90  Q
    |||| ||||||||| | |||||||||||||||||||||||||      |||||||  |||||||||||| ||||  ||||||||| ||||||||||    
T  3013542 ttttgcgaaatatctatttagtccctgaattttacagacgtccatggacatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 3013447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 25278434 - 25278342
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||| | | ||||||| ||||||||||| ||||||||||||   ||||||||||| ||||  ||||||||| ||||||| |||||    
T  25278434 ttttgcgaaatacctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc 25278342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 187
Target Start/End: Original strand, 37344533 - 37344627
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 187  Q
    |||||| ||||| |||||||||| |||||||||| || ||||||||| ||||||| |||||   |  |||||  |||||||||||||| ||||||    
T  37344533 cagccacgtgtataaggactaaattgatggaaatggtaaaaattcgagatttaacttttcatagtaatttttgttgtgtttccaattacacccct 37344627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 5783427 - 5783500
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 79  Q
    |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  5783427 cgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 5783500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9120097 - 9120158
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    ||||||||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  9120097 tttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 9120158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25276800 - 25276861
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  25276800 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 25276861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 37345993 - 37345932
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  37345993 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 37345932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 42134545 - 42134602
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    ||||||||||| |||||||||||||||  |||||||||||||||   |||||||||||    
T  42134545 cgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtc 42134602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 46582068 - 46582129
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  46582068 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 46582129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 47011514 - 47011575
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    ||||||||||||||||||||||||||||||||   | | ||| ||||| |||||||||||||    
T  47011514 tttttcgaaatatcaaattagtccctgaatttacaaaaagtcaatcaactcagtccctccgt 47011575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25279019 - 25278975
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccat 45  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||    
T  25279019 ttttgcgaaatatctatttagtccctgaattttacagacgtccat 25278975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 37344400 - 37344492
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||| | | ||||||  ||||||||||| ||||||||||||   ||||||||||| ||||  ||||||||| ||||||| |||||    
T  37344400 ttttgcgaaatacctatttagtctttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc 37344492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 18184004 - 18183961
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaa 49  Q
    ||||||||||| |||||||||||||||  |||||||||||||||    
T  18184004 cgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 18183961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 36895571 - 36895528
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaa 49  Q
    ||||||||||| |||||||||||||||  |||||||||||||||    
T  36895571 cgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 36895528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 1444212 - 1444151
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||||| |||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  1444212 tttttcaaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 1444151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8168000 - 8168061
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| ||||||||||||||||||||||||| |   | | ||| |||||||||||||||||||    
T  8168000 ttttgcgaaatatcaaattagtccctgaatgtacaaaatgtcaatcaaatcagtccctccgt 8168061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 185
Target Start/End: Complemental strand, 50556023 - 50555939
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattataccc 185  Q
    |||||||||||||||  |||||||||| || ||||||||| |||| || ||||| | |  |||||| |||| ||||||||||||||    
T  50556023 gtgtacaaggactaatttgatggaaatggtaaaaattcgagatttgacttttcaatgtaatttttcttgtg-ttccaattataccc 50555939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 323; Significance: 0; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 4 - 406
Target Start/End: Complemental strand, 27406980 - 27406578
Alignment:
Q  4 ttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtcagccatgtgt 103  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||  ||||||||||||||||||| ||||    
T  27406980 ttcgaaatattaaaatagtccctgaattttacagacgtccatcaaatcagtctctccgtccaaaatgtccgttaacagtgatgatgtgtcagccacgtgt 27406881  T
Q  104 acaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattcactt 203  Q
    ||||||||||||||||||||||| |||||||||  | | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27406880 acaaggactaaactgatggaaatggtcaaaatttaaaaattaacatttcagtctcatttttcctgtgtttccaattatacccctctattaccattcactt 27406781  T
Q  204 tcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcat 303  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  27406780 tcatcctcacattttcactcagaagcatcaaacaagtccccaacctttcaccttcccgcctaaaccgtcacccttttcacttcaccaaaatcatcatcat 27406681  T
Q  304 catcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaacgttgttttccattcactcttgttcg 403  Q
    || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  27406680 caccggcgatcatccttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagacattcaactttgttttccattcactcttgttcg 27406581  T
Q  404 ttt 406  Q
    |||    
T  27406580 ttt 27406578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 7 - 406
Target Start/End: Original strand, 15305861 - 15306260
Alignment:
Q  7 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtcagccatgtgtaca 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||  ||||||||||||||||||| || ||||    
T  15305861 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtccaaaatatccgttaacagtgatgatgtgtcagccacgtataca 15305960  T
Q  107 aggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattcactttca 206  Q
    |||||||||||||||||||| |||||||||| | | ||||||||| |||||| |||||| |||||||||||||||||| ||||||||| |||||||||||    
T  15305961 aggactaaactgatggaaatggtcaaaattcaaaacttaacattttagtctcatttttcttgtgtttccaattataccactctattacgattcactttca 15306060  T
Q  207 tcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatcat 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||     
T  15306061 tcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgccaaaaccgtcaccctcttcacttcaccaaaatcatcatcatcac 15306160  T
Q  307 cggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaacgttgttttccattcactcttgttcgttt 406  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  15306161 cggcgatcatccttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagacattcaactttgttttccattcactcttgttcgttt 15306260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 7 - 406
Target Start/End: Original strand, 15486230 - 15486629
Alignment:
Q  7 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtcagccatgtgtaca 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||  ||||||||||||||||||| || ||||    
T  15486230 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtccaaaatatccgttaacagtgatgatgtgtcagccacgtataca 15486329  T
Q  107 aggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattaccattcactttca 206  Q
    |||||||||||||||||||| |||||||||| | | ||||||||| |||||| |||||| |||||||||||||||||| ||||||||| |||||||||||    
T  15486330 aggactaaactgatggaaatggtcaaaattcaaaacttaacattttagtctcatttttcttgtgtttccaattataccactctattacgattcactttca 15486429  T
Q  207 tcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatcat 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||     
T  15486430 tcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgccaaaaccgtcaccctcttcacttcaccaaaatcatcatcatcac 15486529  T
Q  307 cggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaacgttgttttccattcactcttgttcgttt 406  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  15486530 cggcgatcatccttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagacattcaactttgttttccattcactcttgttcgttt 15486629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 91 - 194
Target Start/End: Original strand, 27691343 - 27691446
Alignment:
Q  91 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27691343 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttcagtatcttttttcctgtgtttccaattatacccctcta 27691442  T
Q  191 ttac 194  Q
    ||||    
T  27691443 ttac 27691446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 91 - 192
Target Start/End: Complemental strand, 33708759 - 33708658
Alignment:
Q  91 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||| ||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33708759 gtcaaccacgtgtacaaggactaaattgatggaaattgtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 33708660  T
Q  191 tt 192  Q
    ||    
T  33708659 tt 33708658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 27691212 - 27691302
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 91  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||| | |||||||||||||    
T  27691212 ttttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaggtccgtcaatagtgatgatgtg 27691302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 33708890 - 33708800
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 91  Q
    |||| |||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||| |||| |||||||| |||||||||||||    
T  33708890 ttttgcgaaatattaaattagtccctgaattttacaaacgtccatcaaatctgtccctccgtccaaaaggtccgttaatagtgatgatgtg 33708800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 101 - 195
Target Start/End: Original strand, 42941973 - 42942067
Alignment:
Q  101 tgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattacc 195  Q
    ||||||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |  |||||||| |||||||||||||||||||||||||||    
T  42941973 tgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctatgtttccaattatacccctctattacc 42942067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 93 - 190
Target Start/End: Original strand, 5036640 - 5036737
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |  |||||||||||||||||||||||| ||||||    
T  5036640 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctgtgtttccaattatactcctcta 5036737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 41042537 - 41042438
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| | |||||||||||||| |||||||||| || ||||||| | ||||||| ||||||| |  |||||||||||||||||||||||||||||||||    
T  41042537 cagccacgggtacaaggactaaattgatggaaattgtaaaaattcaagatttaacttttcagtgtaatttttcctgtgtttccaattatacccctctatt 41042438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 93 - 190
Target Start/End: Complemental strand, 13108290 - 13108193
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| | ||||| ||||||| |  |||||||||||||| ||||||||||||||||    
T  13108290 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcagtataatttttcctgtgttttcaattatacccctcta 13108193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 13108422 - 13108330
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||  | ||||||| ||||||| |||||    
T  13108422 ttttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagcttcgttagtggtgatgacgtgtc 13108330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 38547286 - 38547378
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||   |||||||| || ||||  ||||||||| ||||||| |||||    
T  38547286 ttttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagctccgttagtggtgatgacgtgtc 38547378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 93 - 190
Target Start/End: Complemental strand, 40339633 - 40339536
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||| ||||||||||||||||  ||||||||| || ||||||||| ||||||| ||||||| |  |||| ||||||||| ||||||||||||||||    
T  40339633 cagccacgtgtacaaggactaaatggatggaaatggtaaaaattcgagatttaacttttcagtgtaattttccctgtgttttcaattatacccctcta 40339536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 8609873 - 8609781
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  ||||||||| ||||||| |||||    
T  8609873 ttttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc 8609781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 13282536 - 13282628
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||||||   ||||||||||| ||||  ||||||||| |||||||||||||    
T  13282536 ttttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgtgtc 13282628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 13486185 - 13486093
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||| ||| ||||  ||| |||||||||||||||||||    
T  13486185 ttttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctctgtccaaaagctccattagtagtgatgatgtgtc 13486093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 41825730 - 41825638
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||   ||| ||||||| ||||  || ||||||||||||||||||||    
T  41825730 ttttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcactccgtccaaaagctctgttagtagtgatgatgtgtc 41825638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 100 - 194
Target Start/End: Complemental strand, 13486045 - 13485953
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattac 194  Q
    |||||||||||||||| |||||||||| || ||||||||| ||||||| ||||| | |  |||||||  ||||||||||||||||||||||||||    
T  13486045 gtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcaatgtaatttttcc--tgtttccaattatacccctctattac 13485953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 42941849 - 42941924
Alignment:
Q  18 ttagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||| ||||| ||||||||| | |||||||||||    
T  42941849 ttagtccctgaattttacagatgtccatcaaaatagtccctccgtccaaaatctccgttagtggagatgatgtgtc 42941924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 93 - 187
Target Start/End: Complemental strand, 8609741 - 8609647
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 187  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| | ||||| ||||| | |  |||||||| |||||||||||||||||||    
T  8609741 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcattataatttttcctttgtttccaattatacccct 8609647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 93 - 193
Target Start/End: Complemental strand, 9673118 - 9673012
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctc----ttttttc--ctgtgtttccaattatacccc 186  Q
    |||||| |||||||||||||||  |||||||||| || ||||||||| ||||||| ||||||| ||    |||||||  |||||||||||||||||||||    
T  9673118 cagccacgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttaacttttcagtgtcatttttttttcttctgtgtttccaattatacccc 9673019  T
Q  187 tctatta 193  Q
    |||||||    
T  9673018 tctatta 9673012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 9673245 - 9673159
Alignment:
Q  7 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||||||| | ||| ||||||||||||||||||||||||||||   ||||||||||||||||  | ||||||| |||||||||||||    
T  9673245 gaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtctaaaagcttcgttagtggtgatgatgtgtc 9673159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 41042664 - 41042578
Alignment:
Q  7 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||||||| | |||||||||||||||||||| |||||||||||   ||||||||||| ||||  ||||||||| |||||||||||||    
T  41042664 gaaatatctatttagtccctgaattttacaggcgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgtgtc 41042578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 26242400 - 26242308
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | |||||| |||||||||||||||||||||||||   ||||||||||| ||||  ||||||||| | |||||||||||    
T  26242400 ttttgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggcgatgatgtgtc 26242308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 22272402 - 22272485
Alignment:
Q  9 aatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgt 92  Q
    |||||| | ||||||||||||||||||| ||||||||||||  ||||||||| || ||||  ||||||||| ||||||||||||    
T  22272402 aatatctatttagtccctgaattttacaaacgtccatcaaaatagtccctccatccaaaagctccgttagtggtgatgatgtgt 22272485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 93 - 190
Target Start/End: Original strand, 38547418 - 38547513
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||| |||||||||||||||| ||||||||||  | ||||||||||| ||||| ||||||| |  |||||||   |||||||||||||||||||||    
T  38547418 cagccacgtgtacaaggactaaattgatggaaatgataaaaattcgatacttaacttttcagtataatttttcc--ggtttccaattatacccctcta 38547513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 329
Target Start/End: Complemental strand, 11721633 - 11721465
Alignment:
Q  160 tttttcctgtgtttccaattatacccctctattaccattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcc 259  Q
    ||||| |||| ||| ||||| |||||||||||||||  |  ||| |||  ||||| |||||||| ||  ||||||| | |||||| | ||||| ||||||    
T  11721633 ttttttctgttttttcaattttacccctctattacccataccttccataatcaca-tttcactcggacacatcaaatacgtccctgatctttctccttcc 11721535  T
Q  260 cgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatcatcggcgatcatgcttggaaaagat 329  Q
    |||  ||||| ||| | ||||||| || |||||||||||||||||  |||||||||   |||||||||||    
T  11721534 cgctaaaaccttcaccttcttcacctctccaaaatcatcatcatctccggcgatcaacattggaaaagat 11721465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 7745198 - 7745106
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||  | |||||||||| ||||||||||| |||||||||   |||||||| || ||||  ||||||||| |||||||||||||    
T  7745198 ttttgcgaaatatttatttagtccctgtattttacagacatccatcaaaatggtccctccatccaaaagctccgttagtggtgatgatgtgtc 7745106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 40339760 - 40339677
Alignment:
Q  7 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 90  Q
    |||||||| | ||||||| ||||||||||||| ||||||||||   |||||| | || ||||  ||||||||||||||||||||    
T  40339760 gaaatatctatttagtccatgaattttacagatgtccatcaaaatggtcccttcatccaaaagctccgttagtagtgatgatgt 40339677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 601735 - 601674
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    ||||||||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  601735 tttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 601674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8608296 - 8608357
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  8608296 ttttgcgaaatatcaaattagtccctgaatttataaaatgtcaatcaaatcagtccctccgt 8608357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33761127 - 33761188
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  33761127 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 33761188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 37526084 - 37526027
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    ||||||||||| |||||||||||||||| ||||| |||||||||   |||||||||||    
T  37526084 cgaaatatcaacttagtccctgaatttttcagacatccatcaaaaaggtccctccgtc 37526027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 40020696 - 40020623
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 79  Q
    |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  40020696 cgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 40020623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 304
Target Start/End: Original strand, 9184700 - 9184788
Alignment:
Q  216 tttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatc 304  Q
    |||||||||||  ||||||| | |||| | | ||||| |||||||||  ||||| ||||| ||||||| || |||||||||||||||||    
T  9184700 tttcactcagacacatcaaatacgtccatgatctttctccttcccgctaaaaccttcatcatcttcacctctccaaaatcatcatcatc 9184788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 29237209 - 29237240
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattt 32  Q
    ||||||||||||||||||||||||||||||||    
T  29237209 tttttcgaaatatcaaattagtccctgaattt 29237240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 29239218 - 29239187
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattt 32  Q
    ||||||||||||||||||||||||||||||||    
T  29239218 tttttcgaaatatcaaattagtccctgaattt 29239187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 35510844 - 35510789
Alignment:
Q  7 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    ||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  35510844 gaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 35510789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 11788383 - 11788441
Alignment:
Q  5 tcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    ||||||||||||||| ||||  |||||| |||||||||||||||||   ||||||||||    
T  11788383 tcgaaatatcaaatttgtcctcgaatttaacagacgtccatcaaattcatccctccgtc 11788441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 9184446 - 9184503
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    |||||||||||||||||||||||||||  |||||||| ||| ||   |||||||||||    
T  9184446 cgaaatatcaaattagtccctgaatttgtcagacgtcgatcgaaatggtccctccgtc 9184503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13284026 - 13283965
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| ||||||||||||||||||| |||||||   | | ||| |||||||||||||||||||    
T  13284026 ttttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatcaaatcagtccctccgt 13283965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 31821481 - 31821538
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    ||||||||||| |||||||| ||||||  |||||||||||||||   |||||||||||    
T  31821481 cgaaatatcaacttagtcccagaatttatcagacgtccatcaaaaaggtccctccgtc 31821538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 33707264 - 33707325
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||||||||| ||||||    
T  33707264 ttttacgaaatatcaaattagtccctgaatttataaaatgtcaatcaaatcagtcactccgt 33707325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33762744 - 33762683
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| ||||||||| |||||||||    
T  33762744 ttttacgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcaatccctccgt 33762683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 35509272 - 35509333
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| ||||||||||||| |||||    
T  35509272 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccatccgt 35509333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 15308289 - 15308261
Alignment:
Q  4 ttcgaaatatcaaattagtccctgaattt 32  Q
    |||||||||||||||||||||||||||||    
T  15308289 ttcgaaatatcaaattagtccctgaattt 15308261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 15488658 - 15488630
Alignment:
Q  4 ttcgaaatatcaaattagtccctgaattt 32  Q
    |||||||||||||||||||||||||||||    
T  15488658 ttcgaaatatcaaattagtccctgaattt 15488630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 31201204 - 31201148
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  31201204 cgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 31201148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 41825590 - 41825498
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctc-ttttttcctgtgtttccaattatacccctctat 191  Q
    |||||||||||||||  |||| ||||| || ||||||  |  |||||| ||||||| || ||||||  |||||||| ||||||||||||||||    
T  41825590 gtgtacaaggactaatttgatagaaatggtaaaaattgcaattttaacttttcagtgtcatttttttatgtgtttctaattatacccctctat 41825498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 42897834 - 42897778
Alignment:
Q  7 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    |||||||||| ||||||| |||||||  |||||||||||||||   |||||||||||    
T  42897834 gaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtc 42897778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 163; Significance: 6e-87; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 93 - 399
Target Start/End: Complemental strand, 35404378 - 35404077
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||||| ||||||| |||||||||| || ||||||||||||||||| ||| ||| |  ||||||||||||||||||||||||||||         
T  35404378 cagccacgtgtacaatgactaaattgatggaaatggtaaaaattcgatatttaactttttagtgtaatttttcctgtgtttccaattatacccct----- 35404284  T
Q  193 accattcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaa 292  Q
    || |||  |||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||  |||| |||||||||||| |||||    
T  35404283 actattgtctttcatcctcacattttcacttagaagcatcaaataagtccctaaccttttaccttcccgcctaaattgtcaccctcttcacttctccaaa 35404184  T
Q  293 atcatcatcatcatcggcgatcatgcttggaaaagattcggttttgaagtcagatttcgtggtttgtcaaggtatagccattcaacgttgttttccattc 392  Q
    ||||||||||||  |||||||||  |||||||||||| |||||||||||||||||| |||||||||||||||||  | |||||||| | |||||||||||    
T  35404183 atcatcatcatcgccggcgatcaaccttggaaaagatacggttttgaagtcagattacgtggtttgtcaaggtaacgacattcaacttcgttttccattc 35404084  T
Q  393 actcttg 399  Q
    |||||||    
T  35404083 actcttg 35404077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 91 - 192
Target Start/End: Original strand, 43519613 - 43519714
Alignment:
Q  91 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  43519613 gtcagccatgtgtacaaggactaaattgatggaaatggtcaaaattcgatatttaacatttctgtctcttttttcctgtgttttcaattatacccctcta 43519712  T
Q  191 tt 192  Q
    ||    
T  43519713 tt 43519714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 43519482 - 43519572
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 91  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||| |||| ||| |||||||||||||    
T  43519482 ttttgcgaaatatcaaattagtccctgaattttacaaacgtccatcaaatccgtccctccgtccaaaaggtccattaatagtgatgatgtg 43519572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 11255873 - 11255772
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |  |||||||||||||| ||||||||||||||||||    
T  11255873 cagccacgtgtacaaggactaaattgatggaaattgtaaaaattcgagatttaacttttcagtgtaatttttcctgtgttttcaattatacccctctatt 11255774  T
Q  193 ac 194  Q
    ||    
T  11255773 ac 11255772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 93 - 190
Target Start/End: Original strand, 51012116 - 51012213
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| | ||||| ||||||| |  |||||||| ||||||||||||||||||||||    
T  51012116 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcagtataatttttcctatgtttccaattatacccctcta 51012213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 229 - 315
Target Start/End: Original strand, 25993826 - 25993912
Alignment:
Q  229 catcaaacaagtccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatcatcggcgatca 315  Q
    ||||||||| |||||||||||||| |||||||||| ||||| ||| | ||||||| || ||||||||||||||||| ||||||||||    
T  25993826 catcaaacacgtccctaacctttctccttcccgccaaaaccttcaccatcttcacctctccaaaatcatcatcatcttcggcgatca 25993912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 100 - 194
Target Start/End: Complemental strand, 41761672 - 41761578
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattac 194  Q
    ||||||||||||||||  ||||||||| || ||||||| | ||||||| ||||| | |  |||||||||||||||||||||||||||||||||||    
T  41761672 gtgtacaaggactaaatcgatggaaatggtaaaaattcaagatttaacttttcaatgtaatttttcctgtgtttccaattatacccctctattac 41761578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 93 - 191
Target Start/End: Original strand, 41781730 - 41781828
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctat 191  Q
    |||||||||||||||| |||||| |||||||||| || ||| ||||| ||||||| ||||| | || ||||| || |||||||||||||||||||||||    
T  41781730 cagccatgtgtacaagaactaaattgatggaaatggtaaaacttcgagatttaacttttcaatgtcattttttctatgtttccaattatacccctctat 41781828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 41761812 - 41761720
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  | ||||||| |||||||||||||    
T  41761812 ttttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagcttcgttagtggtgatgatgtgtc 41761720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 49523182 - 49523272
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 91  Q
    |||| ||||||||| | |||||||||||||||||||||||| |||||||   ||||||||||| ||||  ||||||||| |||||||||||    
T  49523182 ttttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtccctccgtccaaaaaatccgttagtggtgatgatgtg 49523272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 51011984 - 51012076
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | |||||| |||||||||||||||||||||||||   ||||||||||| ||||  || |||||||||||||| |||||    
T  51011984 ttttgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttagtagtgatgacgtgtc 51012076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 100 - 187
Target Start/End: Original strand, 49523322 - 49523409
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 187  Q
    |||||||| ||||||| |||||||||| || ||||||||| ||||||| ||||||| |  ||| || |||||||||||||||||||||    
T  49523322 gtgtacaaagactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttctcttgtgtttccaattatacccct 49523409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 185
Target Start/End: Original strand, 42980833 - 42980918
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattataccc 185  Q
    |||||||| ||||||| |||||||||| || ||||||||| ||||||| ||||| | |  ||||| ||||||||||||||||||||    
T  42980833 gtgtacaaagactaaattgatggaaattgtaaaaattcgagatttaacttttcattgtaattttttctgtgtttccaattataccc 42980918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 42980693 - 42980785
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| |||||| || | ||||||||| ||||||||||||||||||||||   ||||||||||| ||||  || |||||| |||||||||||||    
T  42980693 ttttacgaaatttctatttagtcccttaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtc 42980785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 41781614 - 41781689
Alignment:
Q  18 ttagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||||||||||||||||||||| |||||||||   ||||||||||| ||||  |||||||||  ||||||||||||    
T  41781614 ttagtccctgaattttacagacatccatcaaaatggtccctccgtccaaaagctccgttagtgatgatgatgtgtc 41781689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 48646673 - 48646582
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctat 191  Q
    |||||||||||||||  |||||||||| || ||||||  |  |||||| ||||||| || ||||| | ||||||||||||||||||||||||    
T  48646673 gtgtacaaggactaatttgatggaaatggtaaaaattgtagttttaacttttcagtgtcattttttccgtgtttccaattatacccctctat 48646582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 100 - 190
Target Start/End: Complemental strand, 52868094 - 52868005
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||||||||||||| |||||||||| || |||||| || ||||||| ||||||| |   |||||  |||||||||||||||||||||||    
T  52868094 gtgtacaaggactaaattgatggaaatggtaaaaatttgagatttaacttttcagtgt-aattttctcgtgtttccaattatacccctcta 52868005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 93 - 191
Target Start/End: Complemental strand, 2693186 - 2693087
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcg-atatttaacatttcagtctcttttttcctgtgtttccaattatacccctctat 191  Q
    |||||| |||||||||||||||  |||||||||| || |||| | | |  |||||| ||||||| || |||||  |||||||||||||||||||||||||    
T  2693186 cagccacgtgtacaaggactaatttgatggaaatggtaaaaaattgcagttttaacttttcagtgtcattttttatgtgtttccaattatacccctctat 2693087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 187
Target Start/End: Original strand, 11601868 - 11601955
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccct 187  Q
    ||||| |||||||||  |||||||||| || ||||||  |  |||||| ||||||| || ||||| ||||||||||||||||||||||    
T  11601868 gtgtataaggactaatttgatggaaatggtaaaaattgcagttttaacttttcagtgtcattttttctgtgtttccaattatacccct 11601955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 48646808 - 48646721
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    ||||||||| | |||||||||||||||||||||| | |||||||   |||| |||||| ||||  | ||||||| |||||||||||||    
T  48646808 cgaaatatctatttagtccctgaattttacagaccttcatcaaaatggtccttccgtccaaaagcttcgttagtggtgatgatgtgtc 48646721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 59
Target Start/End: Original strand, 11601744 - 11601786
Alignment:
Q  17 attagtccctgaattttacagacgtccatcaaatcagtccctc 59  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  11601744 attagtccctgaattttacagacgtccatcaaaatagtccctc 11601786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 4173771 - 4173710
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | ||||| ||||| |||||||||||||    
T  4173771 ttttgcgaaatatcaaattagtccctgaatttacaaaacgtcaatcaactcagtccctccgt 4173710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 5484603 - 5484676
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 79  Q
    |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  5484603 cgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 5484676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33266041 - 33265980
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  33266041 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 33265980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 39083702 - 39083775
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 79  Q
    |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  39083702 cgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 39083775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 39921557 - 39921630
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 79  Q
    |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  39921557 cgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 39921630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 43507225 - 43507286
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  43507225 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 43507286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43508684 - 43508623
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  43508684 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 43508623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 43779928 - 43779855
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 79  Q
    |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  43779928 cgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 43779855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 35404511 - 35404419
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||  | ||| ||||||||||||||||||||||| ||||   |||| |||||| ||||  ||||||||| ||||||| |||||    
T  35404511 ttttgcgaaatatttatttaatccctgaattttacagacgtccaacaaaatggtccatccgtccaaaagctccgttagtggtgatgacgtgtc 35404419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 27624869 - 27624912
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaa 49  Q
    ||||||||||| |||||||||||||||  |||||||||||||||    
T  27624869 cgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 27624912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 39189445 - 39189516
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgtta 77  Q
    |||||||||||| ||||||||||||||    |||||||||||| |  ||||||||||| |||| ||||||||    
T  39189445 cgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 39189516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 44558554 - 44558511
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaa 49  Q
    ||||||||||| |||||||||||||||  |||||||||||||||    
T  44558554 cgaaatatcaacttagtccctgaatttgtcagacgtccatcaaa 44558511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 835070 - 835012
Alignment:
Q  4 ttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||||||||||||| ||||||||||||||   | ||||| ||||||| |||||||||||    
T  835070 ttcgaaatatcaaaatagtccctgaatttacaaaacgtcaatcaaattagtccctccgt 835012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4169744 - 4169805
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||| ||||||||||||    
T  4169744 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaaccagtccctccgt 4169805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 32652162 - 32652235
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 79  Q
    |||||||||||| |||||| |||||||    |||||||||||| |  ||||||||||| |||| ||||||||||    
T  32652162 cgaaatatcaaaatagtccttgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagt 32652235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 44994348 - 44994275
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 79  Q
    |||||||||||| ||||||||||||||    |||||||||||| |  |||||||| || |||| ||||||||||    
T  44994348 cgaaatatcaaaatagtccctgaatttgtttgacgtccatcaatttcgtccctccatccaaaaggtccgttagt 44994275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 2827468 - 2827524
Alignment:
Q  7 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    |||||||||| ||||||| |||||||  |||||||||||||||   |||||||||||    
T  2827468 gaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtc 2827524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 44794821 - 44794765
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  44794821 cgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 44794765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 47941874 - 47941930
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    ||||||||||| ||| |||||||||||  |||||||||||||||   ||||||||||    
T  47941874 cgaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgt 47941930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 2e-65; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 240 - 409
Target Start/End: Complemental strand, 19987426 - 19987254
Alignment:
Q  240 tccctaacctttcaccttcccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatcatc---ggcgatcatgcttggaaaagattcggttt 336  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||   ||||||||| ||||||||||||| | |||    
T  19987426 tccctaacctttcaccttcccgcctaaaccgtcaccctcttcacttcaccaaaatcatcatcatcatcaccggcgatcattcttggaaaagatttgattt 19987327  T
Q  337 tgaagtcagatttcgtggtttgtcaaggtatagccattcaacgttgttttccattcactcttgttcgtttctc 409  Q
    ||||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||    
T  19987326 tgaagtcagatttcgtggtttgtcaaggtaacaccattcaactttgttttccattcactcttgttcgtttctc 19987254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 91 - 194
Target Start/End: Original strand, 44794396 - 44794499
Alignment:
Q  91 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||||| |||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44794396 gtcagccacgtgtacaaggactaaattgatggaaatggtcaaaatttgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 44794495  T
Q  191 ttac 194  Q
    ||||    
T  44794496 ttac 44794499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 91 - 194
Target Start/End: Original strand, 2660401 - 2660504
Alignment:
Q  91 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    ||||||||  ||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2660401 gtcagccacttgtacaaggactaaattgatggaaattgtcaaaatttgatatttaacatttcagtctcttttttcctgtgttttcaattatacccctcta 2660500  T
Q  191 ttac 194  Q
    ||||    
T  2660501 ttac 2660504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 3152304 - 3152214
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 91  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||||    
T  3152304 ttttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaggtccgttaatagtgatgatgtg 3152214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 91 - 212
Target Start/End: Complemental strand, 19987552 - 19987430
Alignment:
Q  91 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctctt-ttttcctgtgtttccaattatacccctct 189  Q
    ||||| || |||||||||||||||| |||||||||| |||||||||||| ||||||| |||||||||||| |||| || |||||| ||||||||||||||    
T  19987552 gtcagtcacgtgtacaaggactaaattgatggaaatggtcaaaattcgagatttaacgtttcagtctcttttttttctatgtttctaattatacccctct 19987453  T
Q  190 attaccattcactttcatcctca 212  Q
    |||||||||  ||||||||||||    
T  19987452 attaccattgtctttcatcctca 19987430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 19987680 - 19987590
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 91  Q
    |||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||| ||| ||||||||||||||||||    
T  19987680 ttttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgtccaaaaggtctgttagtagtgatgatgtg 19987590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 23293123 - 23293022
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |  |||||||||| ||||||||||||||||||||||    
T  23293123 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctgtatttccaattatacccctctatt 23293024  T
Q  193 ac 194  Q
    ||    
T  23293023 ac 23293022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 44276149 - 44276048
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| ||||||| ||||||| |  |||||||||||||| ||||||||||||||||||    
T  44276149 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctgtgttttcaattatacccctctatt 44276050  T
Q  193 ac 194  Q
    ||    
T  44276049 ac 44276048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 44794265 - 44794355
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 91  Q
    |||| |||||||||||||||||||||||||||| |||| |||||||||||  ||||||||||| |||| |||||||| |||||||||||||    
T  44794265 ttttgcgaaatatcaaattagtccctgaattttgcagaagtccatcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgtg 44794355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 17515501 - 17515602
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    |||||| |||||||||||||||| |||||||||| || |||||| || ||||||| ||||||| |  ||||||||||||||||||||||| |||||||||    
T  17515501 cagccacgtgtacaaggactaaattgatggaaatggtaaaaatttgagatttaacttttcagtgtaatttttcctgtgtttccaattatatccctctatt 17515600  T
Q  193 ac 194  Q
    ||    
T  17515601 ac 17515602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 93 - 190
Target Start/End: Complemental strand, 35905666 - 35905569
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| | ||||| ||||||| |  |||||||||||||||||||||||||||||||    
T  35905666 cagccacgtgtacaaggactaaattgatggaaattgtaaaaattcgagacttaacttttcagtataatttttcctgtgtttccaattatacccctcta 35905569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 93 - 190
Target Start/End: Original strand, 54898627 - 54898724
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| | ||||| ||||||| |  |||||| ||||||||||||||||||||||||    
T  54898627 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcagtataatttttcatgtgtttccaattatacccctcta 54898724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 2660270 - 2660360
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 91  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||| |||| ||| |||| ||  |||||||||    
T  2660270 ttttgcgaaatatcaaattagtccttgaattttacagacgtccatcaaattcgtccctccgtccaaaaggtctgttaataacgatgatgtg 2660360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 101 - 190
Target Start/End: Complemental strand, 7884819 - 7884730
Alignment:
Q  101 tgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||| |||||||||| |||||||||| || ||||||||| | ||||| ||||||| |  |||||||||||||||||||||||||||||||    
T  7884819 tgtataaggactaaattgatggaaatggtaaaaattcgagacttaacttttcagtataatttttcctgtgtttccaattatacccctcta 7884730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 93 - 190
Target Start/End: Complemental strand, 53190713 - 53190616
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||| |||||||||||||||| |||||||||| || |||||| || | ||||| ||||||| |  ||||||||||||||||| |||||||||||||    
T  53190713 cagccacgtgtacaaggactaaattgatggaaatggtaaaaatttgagacttaacttttcagtataatttttcctgtgtttccagttatacccctcta 53190616  T

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Target: chr3; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 94 - 190
Target Start/End: Complemental strand, 2226105 - 2226009
Alignment:
Q  94 agccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    ||||| |||||||||||||||| |||||||||||||  |||||||| | ||||| ||| ||| |   ||||||||||||||||||||||||||||||    
T  2226105 agccacgtgtacaaggactaaattgatggaaatagtacaaattcgagacttaacttttaagtataaattttcctgtgtttccaattatacccctcta 2226009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 3152173 - 3152113
Alignment:
Q  91 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacattt 151  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  3152173 gtcagccacgtgtacaaggactaaattgatggaaatagtcaaaattcgatatttaaaattt 3152113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 23293256 - 23293164
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||| ||||||||||| ||||||||||||  |||||||||||| ||||  ||||||||| |||||||||||||    
T  23293256 ttttgcgaaatatctatttagtccatgaattttacaaacgtccatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgtgtc 23293164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 53190845 - 53190753
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  ||||||||| ||||||| |||||    
T  53190845 ttttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc 53190753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 93 - 191
Target Start/End: Original strand, 43765328 - 43765426
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctat 191  Q
    |||||| |||||||| ||||||| |||||||||| || |||| |||| ||||||| ||||| | |  ||||| ||||||||||||||||||||||||||    
T  43765328 cagccacgtgtacaatgactaaattgatggaaatggtaaaaaatcgagatttaacttttcaatgtaattttttctgtgtttccaattatacccctctat 43765426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 27899034 - 27898934
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctatt 192  Q
    ||||||||||||||||||||||  |||||||||| || ||||||||| |||| || ||||| | |  ||||||||||| ||||||||||||||| |||||    
T  27899034 cagccatgtgtacaaggactaatttgatggaaatggtaaaaattcgagatttgacttttcaatgtaatttttcctgtg-ttccaattataccccgctatt 27898936  T
Q  193 ac 194  Q
    ||    
T  27898935 ac 27898934  T

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Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 51684675 - 51684760
Alignment:
Q  8 aaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    ||||||| | ||||||| ||||||||||||||||||||||||   ||||||||||| ||||  ||||||||| |||||||||||||    
T  51684675 aaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgtgtc 51684760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 17515368 - 17515460
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||| ||||||||||||   ||||||| ||| |||||  |||||||| |||||||||||||    
T  17515368 ttttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaatcaccgttagtggtgatgatgtgtc 17515460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 21348781 - 21348873
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  || |||||| ||||| |||||||    
T  21348781 ttttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgataatgtgtc 21348873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 27899167 - 27899075
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | |||||||||||||||||||||||||||| |||   ||||||||||| ||||  ||||||||| ||||||| |||||    
T  27899167 ttttgcgaaatatctatttagtccctgaattttacagacgtccataaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc 27899075  T

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Target: chr3; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 41977813 - 41977900
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||||||||||||||||||||||||||||||||||||| |||||   ||||||||||| ||||  | ||||| | ||||||| |||||    
T  41977813 cgaaatatcaaattagtccctgaattttacagacgtccgtcaaaatggtccctccgtccaaaagcttcgttaatggtgatgacgtgtc 41977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 100 - 190
Target Start/End: Original strand, 41977947 - 41978035
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||||||||||||| |||||||||| || ||||||||| | ||||| ||||||| |  |||||||  ||||||||||||||||||||||    
T  41977947 gtgtacaaggactaaattgatggaaatggtaaaaattcgagacttaacttttcagtataatttttcc--tgtttccaattatacccctcta 41978035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 46112676 - 46112775
Alignment:
Q  91 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    ||||| || |||||||| ||||||| |||||||||| || ||||||| | ||||||| ||||||| || |||||  ||||||||||| ||||||||||||    
T  46112676 gtcagtcacgtgtacaaagactaaattgatggaaatggtaaaaattcaagatttaacttttcagtgtcattttttatgtgtttccaactatacccctcta 46112775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 93 - 191
Target Start/End: Original strand, 600900 - 600998
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctat 191  Q
    |||||| |||||||||||||||| | |||||||| || |||||| || ||||||| ||||||  || |||||  | |||||||||||||||||||||||    
T  600900 cagccacgtgtacaaggactaaattaatggaaatggtaaaaatttgagatttaacttttcagagtcattttttatatgtttccaattatacccctctat 600998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 42279572 - 42279657
Alignment:
Q  8 aaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    ||||||| | ||||||||||||||||||||||||| ||||||   ||||||||||| ||||  || |||||| |||||||||||||    
T  42279572 aaatatctatttagtccctgaattttacagacgtctatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtc 42279657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 30600004 - 30599912
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | ||||||||||||||||| ||||||| ||||||   ||||||||||| ||||  || |||||| |||||||||||||    
T  30600004 ttttgcgaaatatctatttagtccctgaattttagagacgtcgatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtc 30599912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 35905798 - 35905706
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | |||||||||||||||||||||||| |||||||   ||||||||||| ||||  |||| |||| ||||||| |||||    
T  35905798 ttttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtccctccgtccaaaagctccggtagtggtgatgacgtgtc 35905706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 43765195 - 43765287
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | |||||  |||||||||||||||||||||||||   |||||||| || ||||  ||||||||| |||||||||||||    
T  43765195 ttttgcgaaatatctatttagtttctgaattttacagacgtccatcaaaatggtccctccatccaaaagctccgttagtggtgatgatgtgtc 43765287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 2377104 - 2377179
Alignment:
Q  18 ttagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||||| |||||||||||||||||||||||||   || |||||||||||||  ||||||||| ||||||| |||||    
T  2377104 ttagtctctgaattttacagacgtccatcaaaatggttcctccgtctaaaagctccgttagtggtgatgacgtgtc 2377179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 191
Target Start/End: Original strand, 51684808 - 51684899
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctat 191  Q
    |||||||||||||||  |||||||||| || ||||||  |  |||||| ||||||| || ||||| |||||||| |||||||||||||||||    
T  51684808 gtgtacaaggactaatttgatggaaatggtaaaaattgcaggtttaacttttcagtgtcattttttctgtgttttcaattatacccctctat 51684899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 7884939 - 7884873
Alignment:
Q  21 gtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 87  Q
    |||||||||||||||||||||||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  7884939 gtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttccgttagtggtgatga 7884873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 30599871 - 30599809
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagt 155  Q
    |||||| |||||||||||||||| |||||||||| || ||||||||| ||||||| |||||||    
T  30599871 cagccacgtgtacaaggactaaattgatggaaatggtaaaaattcgagatttaacttttcagt 30599809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 2226238 - 2226146
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    |||| ||||||||| | |||||||||||||||||||||||| |||||||    |||||||||| ||||  || |||||| ||||||| |||||    
T  2226238 ttttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatgttccctccgtccaaaaactctgttagtggtgatgacgtgtc 2226146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 3151745 - 3151698
Alignment:
Q  148 atttcagtctcttttttcctgtgtttccaattatacccctctattacc 195  Q
    |||| |||||||||| || |||||||||||||||||||||||||||||    
T  3151745 atttaagtctcttttatcttgtgtttccaattatacccctctattacc 3151698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 44276265 - 44276190
Alignment:
Q  18 ttagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    ||||||| ||||||||||||||| ||||||||   ||||||||||| ||||  || |||||| |||||||||||||    
T  44276265 ttagtccttgaattttacagacgcccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtc 44276190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 191
Target Start/End: Complemental strand, 48830752 - 48830661
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctat 191  Q
    |||||||||||||||  |||||||||| || ||||||  |  |||||| ||||| | || ||||| | ||||||||||||||||||||||||    
T  48830752 gtgtacaaggactaatttgatggaaatggtaaaaattgtagttttaacttttcattatcattttttccgtgtttccaattatacccctctat 48830661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 48830887 - 48830800
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtgtc 93  Q
    ||||||||| | ||||||  |||||||||| |||||||||||||   ||||||||||| ||||  || |||||| |||||||||||||    
T  48830887 cgaaatatctatttagtctttgaattttacggacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtc 48830800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 23877044 - 23876982
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    ||||| ||||||||||||||||| |||||||| ||| |||||||||||||   ||||||||||    
T  23877044 ttttttgaaatatcaaattagtctctgaatttaacaaacgtccatcaaattcatccctccgtc 23876982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 25535315 - 25535253
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    ||||||||||||| || ||||||||||||||| ||||||||||| |||||   ||||||||||    
T  25535315 tttttcgaaatattaagttagtccctgaatttaacagacgtccaccaaattcatccctccgtc 25535253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 194
Target Start/End: Original strand, 46197918 - 46198012
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctctattac 194  Q
    |||||||||||||||| |||||||||| || |||||||||  |||||| ||||| | |  ||||| || |||||||||||  |||||| ||||||    
T  46197918 gtgtacaaggactaaattgatggaaatggtaaaaattcgagctttaacttttcaatgtaattttttctatgtttccaattgaacccctatattac 46198012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 54898495 - 54898573
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagt 79  Q
    |||| ||||||||| | |||||||||||||||||||||||| |||||||   ||| ||||||| ||||  |||||||||    
T  54898495 ttttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtctctccgtccaaaagctccgttagt 54898573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 23774215 - 23774268
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctc 59  Q
    ||||||||||| |||||||||||||||  |||||||||||||||  ||||||||    
T  23774215 cgaaatatcaatttagtccctgaatttgtcagacgtccatcaaaaaagtccctc 23774268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 38191953 - 38192014
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  38191953 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 38192014  T

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Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 46308865 - 46308926
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  46308865 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 46308926  T

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Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 46611334 - 46611273
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  46611334 ttttgcgaaatatcaaattagtccctgaatttataaaatgtcaatcaaatcagtccctccgt 46611273  T

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Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 48633940 - 48633997
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    ||||||||||| |||||||||||||||  |||||||||||||||   |||||||||||    
T  48633940 cgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtc 48633997  T

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Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 53187800 - 53187861
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  53187800 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 53187861  T

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Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3150310 - 3150369
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctcc 60  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||    
T  3150310 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctcc 3150369  T

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Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 46112552 - 46112606
Alignment:
Q  8 aaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    ||||||| | ||||||| ||||||||||||||||||||||||   ||||||||||    
T  46112552 aaatatctatttagtccatgaattttacagacgtccatcaaaatggtccctccgt 46112606  T

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Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 46197785 - 46197867
Alignment:
Q  8 aaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgt 90  Q
    ||||||| | ||||| |||||||||||||||||||||| |||   |||||| |||| ||||  |||||||||  |||||||||    
T  46197785 aaatatctatttagttcctgaattttacagacgtccattaaaatggtcccttcgtccaaaagttccgttagtgatgatgatgt 46197867  T

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Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 21348916 - 21348993
Alignment:
Q  95 gccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtt 172  Q
    |||| |||||||| ||||||| ||||| |||| || ||||||||| ||||||  ||||||| |  |||||||||||||    
T  21348916 gccacgtgtacaaagactaaattgatgaaaatggtaaaaattcgagatttaatttttcagtgtaatttttcctgtgtt 21348993  T

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Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 33113241 - 33113184
Alignment:
Q  6 cgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtc 63  Q
    ||||||||||| ||||||||| |||||  |||||||||||||||   |||||||||||    
T  33113241 cgaaatatcaacttagtccctaaatttgtcagacgtccatcaaaaaggtccctccgtc 33113184  T

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Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 38193541 - 38193480
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| ||||||||||||| |||||    
T  38193541 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccatccgt 38193480  T

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Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 46310467 - 46310406
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||| ||||||||||||    
T  46310467 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaaccagtccctccgt 46310406  T

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Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 53092681 - 53092742
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| ||||||||||||||| |||||||||||   | | ||| |||||||||||||||||||    
T  53092681 ttttgcgaaatatcaaattaatccctgaatttataaaatgtcaatcaaatcagtccctccgt 53092742  T

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Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 53094304 - 53094243
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  53094304 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatgagtccctccgt 53094243  T

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Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 304
Target Start/End: Original strand, 54092945 - 54093088
Alignment:
Q  160 tttttcctgtgtttccaattatacccctctattacc-attcactttcatcctcacattttcactcagaagcatcaaacaagtccctaacctttcaccttc 258  Q
    |||||| ||| |||| || | ||||||||||||||| || || || ||||||||||||| || ||| || ||| ||| | |||| | ||||||| |||||    
T  54092945 tttttcatgtttttctaaatttacccctctattacccatacatttccatcctcacattt-cagtcacaa-cataaaaaacgtccatgacctttctccttc 54093042  T
Q  259 ccgcctaaaccgtcatcctcttcacttcaccaaaatcatcatcatc 304  Q
    ||||  ||||| ||||| | ||||| || |||||||||||||||||    
T  54093043 ccgctaaaaccttcatcattttcacctctccaaaatcatcatcatc 54093088  T

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Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 54900105 - 54900044
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||| ||||||||||||   | | ||| |||||||||||||||||||    
T  54900105 ttttgcgaaatatcaaatttgtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 54900044  T

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Target: scaffold0058 (Bit Score: 85; Significance: 2e-40; HSPs: 5)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 91 - 195
Target Start/End: Original strand, 3483 - 3587
Alignment:
Q  91 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||||| |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3483 gtcagccacgtgtacaaagactaaattgatggaaatggtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttcaaattatacccctcta 3582  T
Q  191 ttacc 195  Q
    |||||    
T  3583 ttacc 3587  T

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Target: scaffold0058; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 91 - 195
Target Start/End: Original strand, 4655 - 4759
Alignment:
Q  91 gtcagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||||| |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4655 gtcagccacgtgtacaaagactaaattgatggaaatggtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttcaaattatacccctcta 4754  T
Q  191 ttacc 195  Q
    |||||    
T  4755 ttacc 4759  T

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Target: scaffold0058; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 3352 - 3442
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 91  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||| |||||||| |||||||||||||    
T  3352 ttttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgtg 3442  T

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Target: scaffold0058; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 4524 - 4614
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatgatgtg 91  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||| |||||||| |||||||||||||    
T  4524 ttttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgtg 4614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 14374 - 14313
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    |||| |||||||||||||||||||||||||||   | | ||| |||||||||||||||||||    
T  14374 ttttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaatcagtccctccgt 14313  T

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Target: scaffold0564 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 93 - 190
Target Start/End: Original strand, 8451 - 8548
Alignment:
Q  93 cagccatgtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||| ||||||||| |||||| |||||||||| || ||||||||| ||||||| ||||||| |  |||||||||||||||||||||||||||||||    
T  8451 cagccacgtgtacaagtactaaattgatggaaatggtaaaaattcgagatttaacttttcagtgtaatttttcctgtgtttccaattatacccctcta 8548  T

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Target: scaffold1454 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 100 - 190
Target Start/End: Original strand, 1460 - 1550
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttcagtctcttttttcctgtgtttccaattatacccctcta 190  Q
    |||||||||||||||| |||||||||| || ||||||| | | ||||| ||||| | | ||||||||||||||||||||||||||||||||    
T  1460 gtgtacaaggactaaattgatggaaatggtaaaaattcaagacttaacttttcaatatattttttcctgtgtttccaattatacccctcta 1550  T

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Target: scaffold1454; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 1327 - 1407
Alignment:
Q  7 gaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgtctaaaatgtccgttagtagtgatga 87  Q
    |||||||| | ||||||||||||||||||||||||||||||||   ||||||||||| ||||  ||||||||| |||||||    
T  1327 gaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 1407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 54289 - 54228
Alignment:
Q  1 tttttcgaaatatcaaattagtccctgaattttacagacgtccatcaaatcagtccctccgt 62  Q
    ||||||||||||||||||||||||||||||||   | | ||| ||||||| |||||||||||    
T  54289 tttttcgaaatatcaaattagtccctgaatttacaaaatgtcaatcaaattagtccctccgt 54228  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 37402 - 37454
Alignment:
Q  100 gtgtacaaggactaaactgatggaaatagtcaaaattcgatatttaacatttc 152  Q
    |||||||||||||||  |||||||||| || ||||||||| ||||||| ||||    
T  37402 gtgtacaaggactaatttgatggaaattgtaaaaattcgaaatttaacttttc 37454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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