View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10480_low_5 (Length: 323)
Name: NF10480_low_5
Description: NF10480
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10480_low_5 |
 | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0475 (2 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 270; Significance: 1e-151; HSPs: 31)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 2 - 307
Target Start/End: Complemental strand, 4564273 - 4563968
Alignment:
| Q |
2 |
gatccgttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccattttt |
101 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
4564273 |
gatccgttgtttatgtgaattttggaagcattacagttatgacaccaaaacaactgttggaatttgcttgggggttggccaattgcaataaacccttttt |
4564174 |
T |
|
| Q |
102 |
gtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgt |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4564173 |
gtggatcattaggcctgaccttgtcattggtggctcagtcgttttgtcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgt |
4564074 |
T |
|
| Q |
202 |
ccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgt |
301 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
4564073 |
ccacaggagaaagtattgaaccacccttcaattggcggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgt |
4563974 |
T |
|
| Q |
302 |
tgtgtt |
307 |
Q |
| |
|
|||||| |
|
|
| T |
4563973 |
tgtgtt |
4563968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 2 - 307
Target Start/End: Complemental strand, 4602351 - 4602046
Alignment:
| Q |
2 |
gatccgttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccattttt |
101 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||||| ||||||| | ||| | || ||||| |||||||| |||||||||| | ||||||||||||| |
|
|
| T |
4602351 |
gatccgttgtttatgtgaattttggcagcattacagttatgacaccccatcaattattagaattcgcttggggtttggccaattgccataaaccattttt |
4602252 |
T |
|
| Q |
102 |
gtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgt |
201 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
4602251 |
gtggatcattaggcctgatcttgtcattggtggctcagtgattttgtcatctgagtttacaaatgaaatttcagatagaggcctaatagcaagttggtgt |
4602152 |
T |
|
| Q |
202 |
ccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgt |
301 |
Q |
| |
|
||||| |||||||| |||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| || |||| |
|
|
| T |
4602151 |
ccacaagagaaagtgttgaaccacccttcgatcggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagtgccgatgt |
4602052 |
T |
|
| Q |
302 |
tgtgtt |
307 |
Q |
| |
|
|||||| |
|
|
| T |
4602051 |
tgtgtt |
4602046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 2 - 307
Target Start/End: Complemental strand, 4617584 - 4617279
Alignment:
| Q |
2 |
gatccgttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccattttt |
101 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||||| ||||||| || ||| | |||||||||||||||| |||||||||| ||| ||| ||||||| |
|
|
| T |
4617584 |
gatcagttgtttatgtgaatttcggcagcattacagttatgacacccgagcaattactggaatttgcttggggtttggccaattgcaagaaatcattttt |
4617485 |
T |
|
| Q |
102 |
gtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgt |
201 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||||||| |||| |||||||||||| ||||||||| ||||||||||| |||| |||||||||||| |
|
|
| T |
4617484 |
gtggatcataaggcctgatcttgtcattggtggctcagtgattttctcatctgagtttacaaatgaaattgcagatagaggcctaatagcaagttggtgt |
4617385 |
T |
|
| Q |
202 |
ccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgt |
301 |
Q |
| |
|
||||| || ||||| ||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
4617384 |
ccacaagacaaagtgttgaaccacccttcaatcggaggattcttgactcattgcggatggaattcaaccactgaaagtatatgcgctggagtgccaatgt |
4617285 |
T |
|
| Q |
302 |
tgtgtt |
307 |
Q |
| |
|
|||||| |
|
|
| T |
4617284 |
tgtgtt |
4617279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 4 - 307
Target Start/End: Complemental strand, 4592791 - 4592488
Alignment:
| Q |
4 |
tccgttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgt |
103 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||| ||| ||| || |||| || ||||||||||| |||||||||| ||||||||| ||||||| |
|
|
| T |
4592791 |
tccgttgtttatgtgaatttcggcagccttacagttatgaatgaagagaaaatgttagagtttgcttggggtttggccaattgcaataaaccttttttgt |
4592692 |
T |
|
| Q |
104 |
ggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtcc |
203 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| || | ||||| ||||| |||||||||||||||||||||||||||||| |||| || || |||||||| |
|
|
| T |
4592691 |
ggatcattaggcctgatcttgtcattggtggcacaattgttttgtcatcggagtttgtgaatgaaatttcagatagaggcgtaatcgcgagctggtgtcc |
4592592 |
T |
|
| Q |
204 |
acaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgttg |
303 |
Q |
| |
|
|| ||| |||| || |||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4592591 |
tcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggaattccaatgttg |
4592492 |
T |
|
| Q |
304 |
tgtt |
307 |
Q |
| |
|
|||| |
|
|
| T |
4592491 |
tgtt |
4592488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 4 - 307
Target Start/End: Original strand, 4613290 - 4613593
Alignment:
| Q |
4 |
tccgttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgt |
103 |
Q |
| |
|
|||||||||||||||||||| || ||||| || ||| |||| ||||| |||| || || ||||||||||| ||||| ||| ||| |||| ||||||| |
|
|
| T |
4613290 |
tccgttgtttatgtgaattttgggagcatgaccgttatgactgcagaaaaactattagagtttgcttggggtttggcgaatagcaagcaaccctttttgt |
4613389 |
T |
|
| Q |
104 |
ggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtcc |
203 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||||||||| |||| || || |||||||| |
|
|
| T |
4613390 |
ggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcgagctggtgtcc |
4613489 |
T |
|
| Q |
204 |
acaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgttg |
303 |
Q |
| |
|
|| ||| |||| || |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
4613490 |
tcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttg |
4613589 |
T |
|
| Q |
304 |
tgtt |
307 |
Q |
| |
|
|||| |
|
|
| T |
4613590 |
tgtt |
4613593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 64 - 300
Target Start/End: Original strand, 4514753 - 4514989
Alignment:
| Q |
64 |
tttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtga |
163 |
Q |
| |
|
||||||||||| ||||||||| ||| ||| | ||||| ||||||||||||||||| |||||||||||||||||||| ||||| || ||||||||||||| |
|
|
| T |
4514753 |
tttgcttggggtttggccaatagcaagaaaacctttttatggatcattaggcctgatcttgtcattggtggctcagtggttttgtcgtctgagtttgtga |
4514852 |
T |
|
| Q |
164 |
atgaaatttcagatagaggcttaattgcaagttggtgtccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaa |
263 |
Q |
| |
|
|||||||| ||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4514853 |
atgaaattgcagatagaggcctaatagcaagttggtgtccacaagagaaagttttgaaccacccttcaattggcggattcttgactcattgcggatggaa |
4514952 |
T |
|
| Q |
264 |
ctcaaccactgaaagtatatgtgctggagttccaatg |
300 |
Q |
| |
|
|||||||||||| || ||||| |||||||| |||||| |
|
|
| T |
4514953 |
ctcaaccactgagagcatatgcgctggagtgccaatg |
4514989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 7 - 307
Target Start/End: Complemental strand, 4598728 - 4598428
Alignment:
| Q |
7 |
gttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtgga |
106 |
Q |
| |
|
||||||||||||||||| || ||||| || || |||| ||||| | |||| || ||||||||||| ||||||||| ||| ||||| |||||||||| |
|
|
| T |
4598728 |
gttgtttatgtgaattttgggagcataacggtgatgactgcagaaaagttgttagactttgcttggggtttggccaatagcaagaaaccctttttgtgga |
4598629 |
T |
|
| Q |
107 |
tcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtccaca |
206 |
Q |
| |
|
||||||||||||| ||||||||||||||||| || ||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||| || |
|
|
| T |
4598628 |
tcattaggcctgatcttgtcattggtggctcggttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcttagttgcaagctggtgtctgca |
4598529 |
T |
|
| Q |
207 |
ggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgttgtgt |
306 |
Q |
| |
|
||| |||| || ||||| |||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
4598528 |
agagcaagtattaaaccatccttcaattggtggattcttaactcattgcggatggaactcaaccactgaaagtatatgtgccggagtgccaatgttgtgt |
4598429 |
T |
|
| Q |
307 |
t |
307 |
Q |
| |
|
| |
|
|
| T |
4598428 |
t |
4598428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 64 - 307
Target Start/End: Complemental strand, 4561005 - 4560763
Alignment:
| Q |
64 |
tttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtga |
163 |
Q |
| |
|
||||||||||| |||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||| |||||||| ||| ||| |
|
|
| T |
4561005 |
tttgcttggggtttggccaacagcaagaaaccatttttatggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgatttt-tga |
4560907 |
T |
|
| Q |
164 |
atgaaatttcagatagaggcttaattgcaagttggtgtccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaa |
263 |
Q |
| |
|
| ||||||||||||||||| |||| ||||||||||||||||| |||||||| ||||||||||| ||| | || |||||||||||||||||||||||||| |
|
|
| T |
4560906 |
aagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaa |
4560807 |
T |
|
| Q |
264 |
ctcaaccactgaaagtatatgtgctggagttccaatgttgtgtt |
307 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4560806 |
ctcaaccactgaaagcatatgtgctggagttccaatgttgtgtt |
4560763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 64 - 307
Target Start/End: Complemental strand, 4574808 - 4574565
Alignment:
| Q |
64 |
tttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtga |
163 |
Q |
| |
|
||||||||||| |||||||| ||| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||| ||| ||| |
|
|
| T |
4574808 |
tttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttga |
4574709 |
T |
|
| Q |
164 |
atgaaatttcagatagaggcttaattgcaagttggtgtccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaa |
263 |
Q |
| |
|
| ||||||||||||||||| |||| ||||||||||||||||| |||||||| |||||||||| |||| | || |||||||||||||||||||||||||| |
|
|
| T |
4574708 |
aagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaa |
4574609 |
T |
|
| Q |
264 |
ctcaaccactgaaagtatatgtgctggagttccaatgttgtgtt |
307 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
4574608 |
ctcaaccactgaaagcatatgtgctggagttccaatgttatgtt |
4574565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 2 - 307
Target Start/End: Complemental strand, 4481255 - 4480950
Alignment:
| Q |
2 |
gatccgttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccattttt |
101 |
Q |
| |
|
|||| ||||||||||| ||||| || ||||| ||| || || | | ||| |||| || || ||||||||||| || |||||| ||| ||| ||||| |
|
|
| T |
4481255 |
gatctgttgtttatgtaaattttggcagcatcacaattatgtctcaagagaaactcttagagtttgcttggggttttgccaatagcaaaaaaaacttttt |
4481156 |
T |
|
| Q |
102 |
gtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgt |
201 |
Q |
| |
|
|||||| |||||| || | |||||||||||||||||||| || || |||||||||| | |||| ||||||||| |||||||| |||| |||||||||||| |
|
|
| T |
4481155 |
gtggattattaggtctaatcttgtcattggtggctcagtggtgttgtcatctgagtatttgaaagaaatttcaaatagaggcctaatagcaagttggtgt |
4481056 |
T |
|
| Q |
202 |
ccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgt |
301 |
Q |
| |
|
||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
4481055 |
ccacaagagaaagttttgaaccacccttcaatcggcggattcttgactcattgcggatggaactcaaccactgaaagtgtatgtgctggagtgccaatgt |
4480956 |
T |
|
| Q |
302 |
tgtgtt |
307 |
Q |
| |
|
|||||| |
|
|
| T |
4480955 |
tgtgtt |
4480950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 64 - 306
Target Start/End: Complemental strand, 3172241 - 3171999
Alignment:
| Q |
64 |
tttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtga |
163 |
Q |
| |
|
||||||||||| || ||||| ||| ||||| ||||||||||| ||||||||||| ||||||||||||||||| || ||||| ||||| |||||||||| |
|
|
| T |
3172241 |
tttgcttggggtttagccaacagcaagaaaccctttttgtggattattaggcctgatcttgtcattggtggctcggttgttttgtcatcggagtttgtga |
3172142 |
T |
|
| Q |
164 |
atgaaatttcagatagaggcttaattgcaagttggtgtccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaa |
263 |
Q |
| |
|
|||||||||||||||||||| |||| |||||||||||||| || |||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
3172141 |
atgaaatttcagatagaggcctaatagcaagttggtgtccgcaagagaaagtgttgaaccatccttcaattggcggattcttgactcactgcggatggaa |
3172042 |
T |
|
| Q |
264 |
ctcaaccactgaaagtatatgtgctggagttccaatgttgtgt |
306 |
Q |
| |
|
||||||||| |||||| ||||||||||| | |||||||||||| |
|
|
| T |
3172041 |
ctcaaccacggaaagtgtatgtgctggaatgccaatgttgtgt |
3171999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 4266735 - 4267041
Alignment:
| Q |
1 |
agatccgttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttt |
100 |
Q |
| |
|
||||| ||||||||||| ||||| || ||||| |||||| || ||| ||| | || || || ||||||||||| |||||||| ||| || || |||| |
|
|
| T |
4266735 |
agatctgttgtttatgtaaattttggtagcatcacagttatgtcacgagagaagctcttagagtttgcttggggtttggccaacagcaagaacccttttt |
4266834 |
T |
|
| Q |
101 |
tgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtg |
200 |
Q |
| |
|
||||||| ||||||||||| ||||||||||| |||||||| ||||| |||||||| ||| | || ||||||||||||||||| |||| ||||||||||| |
|
|
| T |
4266835 |
tgtggataattaggcctgatcttgtcattgggggctcagttgttttgtcatctgatttttttaaagaaatttcagatagaggactaatagcaagttggtg |
4266934 |
T |
|
| Q |
201 |
tccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatg |
300 |
Q |
| |
|
|||||| || ||||| |||||||||||||| || || |||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||| |
|
|
| T |
4266935 |
tccacaagataaagtgttgaaccacccttcgattggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgccaatg |
4267034 |
T |
|
| Q |
301 |
ttgtgtt |
307 |
Q |
| |
|
||||||| |
|
|
| T |
4267035 |
ttgtgtt |
4267041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 2 - 307
Target Start/End: Complemental strand, 4461685 - 4461380
Alignment:
| Q |
2 |
gatccgttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccattttt |
101 |
Q |
| |
|
|||| ||||| ||||| ||||| || ||||| |||||| |||| || || |||||||| || ||||||||||| ||||| || ||| ||||| ||||| |
|
|
| T |
4461685 |
gatctgttgtctatgtaaattttggcagcatcacagttatgactcctgatcaactgttagagtttgcttggggtttggctgatagcaagaaacccttttt |
4461586 |
T |
|
| Q |
102 |
gtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgt |
201 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||| | |||| |||||||||||||||||||||||||||||||||||| |||| ||||| |||||| |
|
|
| T |
4461585 |
atggatcattaggcctgatcttgtcattggcggctcgtttattttgtcatctgagtttgtgaatgaaatttcagatagaggcctaatagcaagctggtgt |
4461486 |
T |
|
| Q |
202 |
ccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgt |
301 |
Q |
| |
|
|| || ||| |||| |||||||||||||||| || ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| || |||| |
|
|
| T |
4461485 |
ccgcaagagcaagtactgaaccacccttcaattggtggattcttgactcattgtggatggaattcaaccactgaaagcatatgtgctggagtgccgatgt |
4461386 |
T |
|
| Q |
302 |
tgtgtt |
307 |
Q |
| |
|
|||||| |
|
|
| T |
4461385 |
tgtgtt |
4461380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 4 - 307
Target Start/End: Complemental strand, 4557685 - 4557382
Alignment:
| Q |
4 |
tccgttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgt |
103 |
Q |
| |
|
|||||||||||||||||||| || ||||| |||||| |||| ||||| ||||||| || ||||| ||||| || || ||| ||| |||| ||||||| |
|
|
| T |
4557685 |
tccgttgtttatgtgaattttgggagcatgacagttatgacggcagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgt |
4557586 |
T |
|
| Q |
104 |
ggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtcc |
203 |
Q |
| |
|
||||||||||||| || |||||||| ||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||| |||| || | ||||| || |
|
|
| T |
4557585 |
ggatcattaggcccgatcttgtcatcggtggctcagttgttttgtcatcggagtttgtcaatgaaatttcagatagaggcctaatcgcgggctggtgccc |
4557486 |
T |
|
| Q |
204 |
acaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgttg |
303 |
Q |
| |
|
|| ||| |||| || ||||| |||||||| || ||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
4557485 |
gcaagagcaagtattaaaccatccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatctgctggagttccaatgttg |
4557386 |
T |
|
| Q |
304 |
tgtt |
307 |
Q |
| |
|
|||| |
|
|
| T |
4557385 |
tgtt |
4557382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 7 - 307
Target Start/End: Complemental strand, 4506414 - 4506114
Alignment:
| Q |
7 |
gttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtgga |
106 |
Q |
| |
|
||||||||||||||||| |||||||| ||| || || | || || || | || || ||||||||||| ||||||||| ||| ||||| |||||||||| |
|
|
| T |
4506414 |
gttgtttatgtgaattttggaagcatcacaattatgtctccggagaaatttttagagtttgcttggggtttggccaatagcaagaaaccctttttgtgga |
4506315 |
T |
|
| Q |
107 |
tcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtccaca |
206 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||| ||||| || || ||||||| |||||||||||||||||| || | || ||||| |||||| |||| |
|
|
| T |
4506314 |
tcattaggcctgatcttgtaattggtggctcagtggttttgtcttcagagtttgcaaatgaaatttcagatagaagccttatagcaagctggtgttcaca |
4506215 |
T |
|
| Q |
207 |
ggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgttgtgt |
306 |
Q |
| |
|
|||||||| || || ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||| ||||| |
|
|
| T |
4506214 |
agagaaagtgttaaatcacccttcaattggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgctgtgt |
4506115 |
T |
|
| Q |
307 |
t |
307 |
Q |
| |
|
| |
|
|
| T |
4506114 |
t |
4506114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 7 - 307
Target Start/End: Complemental strand, 4579989 - 4579689
Alignment:
| Q |
7 |
gttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtgga |
106 |
Q |
| |
|
||||||||||||||||| || ||| | |||||| |||| ||||| ||||||| || ||||| ||||| || || ||| ||| |||| |||||||||| |
|
|
| T |
4579989 |
gttgtttatgtgaattttgggagcttgacagttatgactgcagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtgga |
4579890 |
T |
|
| Q |
107 |
tcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtccaca |
206 |
Q |
| |
|
|||||||||| || |||||||| || ||||||| ||||| ||||| |||||||||||||||||||||||||||||| |||| | || |||||||| || |
|
|
| T |
4579889 |
tcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaataacgagctggtgtccgca |
4579790 |
T |
|
| Q |
207 |
ggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgttgtgt |
306 |
Q |
| |
|
||| |||| |||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
4579789 |
agagcaagtactgaaccacccttcaattggtggattcttgactcattgcggatggaactcaatcactgaaagcatatctgctggagttccaatgttgtgt |
4579690 |
T |
|
| Q |
307 |
t |
307 |
Q |
| |
|
| |
|
|
| T |
4579689 |
t |
4579689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 4 - 307
Target Start/End: Complemental strand, 4586196 - 4585893
Alignment:
| Q |
4 |
tccgttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgt |
103 |
Q |
| |
|
|||||||||||||||||||| || |||| |||||| |||| ||||| |||| || || ||||||||||| ||||||||| ||| ||| ||||| | |
|
|
| T |
4586196 |
tccgttgtttatgtgaattttgggagcacaacagttatgactacagaaaaactattagagtttgcttggggtttggccaatagcaagcaacattttttat |
4586097 |
T |
|
| Q |
104 |
ggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtcc |
203 |
Q |
| |
|
|||||||||| ||||| |||||||||||||| || | ||||| |||||||||||| |||||||||||||||||||||| |||| || ||||||| || |
|
|
| T |
4586096 |
ggatcattagacctgatcttgtcattggtggttccttggttttgtcatctgagtttaagaatgaaatttcagatagaggcctaatcgcgggttggtgccc |
4585997 |
T |
|
| Q |
204 |
acaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgttg |
303 |
Q |
| |
|
|| ||| |||| ||||||||||||||||| || |||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
4585996 |
gcaagagcaagtattgaaccacccttcaattggtggattcttgactcactgtggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttg |
4585897 |
T |
|
| Q |
304 |
tgtt |
307 |
Q |
| |
|
|||| |
|
|
| T |
4585896 |
tgtt |
4585893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 2 - 307
Target Start/End: Original strand, 4503967 - 4504272
Alignment:
| Q |
2 |
gatccgttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccattttt |
101 |
Q |
| |
|
|||| ||||||||||| ||||| || |||||||||||| || | ||| || |||| || ||||||||||| ||||||||| ||| ||||| ||||| |
|
|
| T |
4503967 |
gatctgttgtttatgtaaattttggcagcattacagttatgtcttaagataaattgttagagtttgcttggggtttggccaatagcaagaaacctttttt |
4504066 |
T |
|
| Q |
102 |
gtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgt |
201 |
Q |
| |
|
|||||| ||||||||||| ||||| ||||||||||||| || || |||||||| ||||||||||||| ||| ||||||| | | |||||||||||| |
|
|
| T |
4504067 |
gtggattattaggcctgatcttgttattggtggctcagaggtgttgtcatctgattttgtgaatgaaacttctaatagaggacttgtagcaagttggtgt |
4504166 |
T |
|
| Q |
202 |
ccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgt |
301 |
Q |
| |
|
||||| || ||||| ||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||| ||||||| |
|
|
| T |
4504167 |
ccacaagataaagtgttgaaccacccttcaatcggaggattcttgactcattgtggatggaactcaaccactgaaagtgtttgtgctggagtgccaatgt |
4504266 |
T |
|
| Q |
302 |
tgtgtt |
307 |
Q |
| |
|
|||||| |
|
|
| T |
4504267 |
tgtgtt |
4504272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 4 - 307
Target Start/End: Complemental strand, 4571532 - 4571229
Alignment:
| Q |
4 |
tccgttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgt |
103 |
Q |
| |
|
|||||||||||||||||||| || |||| |||||| |||| ||||| ||||||| || ||||| ||||| || || ||| ||| ||| ||||||| |
|
|
| T |
4571532 |
tccgttgtttatgtgaattttgggagcaggacagttatgacttcagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaactctttttgt |
4571433 |
T |
|
| Q |
104 |
ggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtcc |
203 |
Q |
| |
|
||||||||||||| || |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||||| ||||||| | |
|
|
| T |
4571432 |
ggatcattaggcccgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaattgctggttggtgctc |
4571333 |
T |
|
| Q |
204 |
acaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgttg |
303 |
Q |
| |
|
|| |||||||| |||||||| |||||||| || || ||||||||||| || |||||||||||||| || ||||| |||| | ||||||||||||||||| |
|
|
| T |
4571332 |
gcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactcaacgaccgaaagcatatctactggagttccaatgttg |
4571233 |
T |
|
| Q |
304 |
tgtt |
307 |
Q |
| |
|
|||| |
|
|
| T |
4571232 |
tgtt |
4571229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 7 - 307
Target Start/End: Complemental strand, 4626508 - 4626208
Alignment:
| Q |
7 |
gttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtgga |
106 |
Q |
| |
|
|||||||||||||| || || ||| ||| |||| |||| ||| | ||||||| || ||||||||||| ||||| || ||| ||||| |||||||||| |
|
|
| T |
4626508 |
gttgtttatgtgaactttggcagcgttatagttatgactccacagaaactgttagagtttgcttggggtttggctgatagcaagaaaccctttttgtgga |
4626409 |
T |
|
| Q |
107 |
tcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtccaca |
206 |
Q |
| |
|
||||||||||||| ||||| |||||||||||| | ||| ||||| ||||||| |||||||||||||||||||||| |||| ||||| |||||||| || |
|
|
| T |
4626408 |
tcattaggcctgatcttgtgattggtggctcatttatttcgtcatccgagtttgagaatgaaatttcagatagaggcctaatcgcaagctggtgtccgca |
4626309 |
T |
|
| Q |
207 |
ggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgttgtgt |
306 |
Q |
| |
|
|||||||| ||||||| |||||||| || |||||||| |||||||| |||||||||||||||| |||||| ||||| ||||||||||||||| ||||| |
|
|
| T |
4626308 |
agagaaagtactgaaccatccttcaattggtggattcttaactcattgtggatggaactcaaccattgaaagcatatgcgctggagttccaatgctgtgt |
4626209 |
T |
|
| Q |
307 |
t |
307 |
Q |
| |
|
| |
|
|
| T |
4626208 |
t |
4626208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 8 - 307
Target Start/End: Complemental strand, 4622698 - 4622399
Alignment:
| Q |
8 |
ttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggat |
107 |
Q |
| |
|
||||||| |||||||| || ||||||||||| |||| | ||| ||||| || || ||||||||||| ||||| || ||| ||||| ||||||||||| |
|
|
| T |
4622698 |
ttgtttacgtgaattttggcagcattacagtgatgactcgagatcaactattagagtttgcttggggtttggctgatagcaagaaaccctttttgtggat |
4622599 |
T |
|
| Q |
108 |
cattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtccacag |
207 |
Q |
| |
|
||||||||||||||||||||| || ||||| | |||| ||||||||||||| |||||||||||||| ||||||| |||| ||| ||||||||||||| |
|
|
| T |
4622598 |
cattaggcctgaccttgtcatgggcggctcgtttattttgtcatctgagtttgagaatgaaatttcaggtagaggcctaatcgcaggttggtgtccacaa |
4622499 |
T |
|
| Q |
208 |
gagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgttgtgtt |
307 |
Q |
| |
|
||| |||| | ||||||||| |||| || ||||||||||||||||| |||||||| |||||||| ||||| ||||||||||||||| ||||| |||||| |
|
|
| T |
4622498 |
gaggaagtacttaaccaccctgcaattggtggattcttgactcattgtggatggaattcaaccaccgaaagcatatgtgctggagtttcaatgctgtgtt |
4622399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 2 - 284
Target Start/End: Original strand, 4299391 - 4299673
Alignment:
| Q |
2 |
gatccgttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccattttt |
101 |
Q |
| |
|
|||| ||||||||||||||||| || ||| |||||||| |||| ||||| |||||||| || |||||||||| |||||||||| || ||||||||||| |
|
|
| T |
4299391 |
gatcggttgtttatgtgaattttggcagcgttacagttatgactccagagcaactgttagagattgcttggggtttggccaattgcaggaaaccattttt |
4299490 |
T |
|
| Q |
102 |
gtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgt |
201 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||| | |||| ||||||||||||| ||||||||||||| |||||||| ||| ||||| | |||| |
|
|
| T |
4299491 |
gtggatcattaggccagaccttgtcattggcggcttgtttattttgtcatctgagtttgagaatgaaatttcaaatagaggcctaaccgcaagctagtgt |
4299590 |
T |
|
| Q |
202 |
ccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatg |
284 |
Q |
| |
|
||||| || |||| |||||||||||||||| || |||||||||||||| || |||||||||||||||| |||||| ||||| |
|
|
| T |
4299591 |
ccacaagaacaagtactgaaccacccttcaattggtggattcttgactcactgtggatggaactcaaccattgaaagcatatg |
4299673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 11 - 300
Target Start/End: Complemental strand, 4458148 - 4457858
Alignment:
| Q |
11 |
tttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaa-ccatttttgtggatca |
109 |
Q |
| |
|
||||||| ||||| |||||||| |||||| || | | ||| | || || ||||||||||||| |||||||| ||| ||| || ||||||||||| | |
|
|
| T |
4458148 |
tttatgtaaattttggaagcatcacagttatgtctcaagagaagctcttagaatttgcttgggttttggccaacagcaagaaaaccttttttgtggataa |
4458049 |
T |
|
| Q |
110 |
ttaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtccacagga |
209 |
Q |
| |
|
||||||||| ||||||||||||||||| || ||||| ||||| || ||||||||||||| ||| |||||||||||||| ||||||||||||||||| || |
|
|
| T |
4458048 |
ctaggcctgatcttgtcattggtggctcggttgttttgtcatcggattttgtgaatgaaacttctgatagaggcttaatagcaagttggtgtccacaaga |
4457949 |
T |
|
| Q |
210 |
gaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatg |
300 |
Q |
| |
|
||||| ||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||||||||| ||||| |||||||| |||||| |
|
|
| T |
4457948 |
taaagtgttgaaccacccttcaatcggaggattcttgactcattgtggatgaaactcaaccactgaaagcatatgcgctggagtgccaatg |
4457858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 2 - 307
Target Start/End: Complemental strand, 4470365 - 4470060
Alignment:
| Q |
2 |
gatccgttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccattttt |
101 |
Q |
| |
|
|||| ||||| ||||| |||||||| ||| | |||||| || | ||||| ||||||| || ||||||||||| ||||| ||| ||| |||| ||||| |
|
|
| T |
4470365 |
gatctgttgtctatgtaaatttcggcagcgtcacagttatgtctccagagaaactgttagagtttgcttggggtttggcaaatagcaagcaacccttttt |
4470266 |
T |
|
| Q |
102 |
gtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgt |
201 |
Q |
| |
|
||||||||||||||| || ||||||||||| ||||| || ||||| ||||| ||| |||| |||| |||||||||||||||| |||| | | |||||| |
|
|
| T |
4470265 |
gtggatcattaggcccgatcttgtcattggcggctcggtagttttctcatcagagattgtaaatggaatttcagatagaggcctaatcgtgaactggtgt |
4470166 |
T |
|
| Q |
202 |
ccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgt |
301 |
Q |
| |
|
|| || ||| |||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||| |
|
|
| T |
4470165 |
cctcaagagcaagtactgaaccacccttcaatcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgt |
4470066 |
T |
|
| Q |
302 |
tgtgtt |
307 |
Q |
| |
|
|||||| |
|
|
| T |
4470065 |
tgtgtt |
4470060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 10 - 307
Target Start/End: Complemental strand, 4516875 - 4516578
Alignment:
| Q |
10 |
gtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatca |
109 |
Q |
| |
|
|||||||||||||| |||||||| || || |||| ||||| |||||||| || || |||||||| |||||||| ||| ||||| ||||||||||| | |
|
|
| T |
4516875 |
gtttatgtgaattttggaagcatcacggtcatgactccagatcaactgttagagttcgcttggggtttggccaacagcaagaaaccttttttgtggatta |
4516776 |
T |
|
| Q |
110 |
ttaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtccacagga |
209 |
Q |
| |
|
|||||||||||||||||||||||||||| || |||| ||||| || ||||||||||||| ||| ||||||||| |||| ||||| |||||||| || || |
|
|
| T |
4516775 |
ttaggcctgaccttgtcattggtggctcggttattttgtcatccgattttgtgaatgaaacttcggatagaggcgtaatagcaagctggtgtccgcaaga |
4516676 |
T |
|
| Q |
210 |
gaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgttgtgtt |
307 |
Q |
| |
|
|||||| |||||||| |||||| | || ||||||||||||||||| ||||||||||| || | ||||| || ||||| ||||| ||||||||||||| |
|
|
| T |
4516675 |
gaaagtgttgaaccatccttcagttggaggattcttgactcattgtggatggaactccacaatggaaagcatctgtgccggagtaccaatgttgtgtt |
4516578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 7 - 307
Target Start/End: Original strand, 4259729 - 4260029
Alignment:
| Q |
7 |
gttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtgga |
106 |
Q |
| |
|
|||||||| |||||||| || |||||||||||| |||| ||||| ||| | || || ||||||||||| ||||||||| ||| ||||| |||||||||| |
|
|
| T |
4259729 |
gttgtttacgtgaattttggcagcattacagttatgactccagatcaatttttagagtttgcttggggattggccaatagcaagaaaccctttttgtgga |
4259828 |
T |
|
| Q |
107 |
tcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtccaca |
206 |
Q |
| |
|
|||||||||||||||| | ||||||||||| | |||| ||||||||||||| || ||||||||| ||||||||| |||| || || |||||||| || |
|
|
| T |
4259829 |
tcattaggcctgacctcattattggtggctcctttattttgtcatctgagtttgagagtgaaatttcggatagaggcctaatcgcgagctggtgtccgca |
4259928 |
T |
|
| Q |
207 |
ggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgttgtgt |
306 |
Q |
| |
|
||| |||| |||||||| ||||| | || |||||||| ||||||||||||||||||||||||| |||||| || ||||| | |||||||||||||||| |
|
|
| T |
4259929 |
agagcaagtactgaaccactcttcagttggtggattcttaactcattgcggatggaactcaaccattgaaagcatttgtgccgaagttccaatgttgtgt |
4260028 |
T |
|
| Q |
307 |
t |
307 |
Q |
| |
|
| |
|
|
| T |
4260029 |
t |
4260029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 64 - 307
Target Start/End: Original strand, 4489987 - 4490230
Alignment:
| Q |
64 |
tttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtga |
163 |
Q |
| |
|
||||| ||||| |||||||| ||| ||||| ||||||||||||||||||||||| ||||| |||||||||||| || || |||||||| ||| ||| |
|
|
| T |
4489987 |
tttgcatggggtttggccaacagcaagaaaccctttttgtggatcattaggcctgatcttgttattggtggctcacaggtgttgtcatctgattttttga |
4490086 |
T |
|
| Q |
164 |
atgaaatttcagatagaggcttaattgcaagttggtgtccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaa |
263 |
Q |
| |
|
| ||||||||||||||||| |||| ||||||||||||||||| ||||| || ||||| ||||||||||| || ||||||||||||||||| |||||||| |
|
|
| T |
4490087 |
aagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaggtattgaatcacccttcaattggtggattcttgactcattgtggatggaa |
4490186 |
T |
|
| Q |
264 |
ctcaaccactgaaagtatatgtgctggagttccaatgttgtgtt |
307 |
Q |
| |
|
||||| || || ||||||||||||||||| ||||||||||||| |
|
|
| T |
4490187 |
ctcaatcatggagagtatatgtgctggagtgccaatgttgtgtt |
4490230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 7 - 307
Target Start/End: Original strand, 4256199 - 4256486
Alignment:
| Q |
7 |
gttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtgga |
106 |
Q |
| |
|
|||||||| |||||||| || |||||||||||| |||| ||||| |||||||| || ||||||||||| ||||||||| ||| |||||||||||||| | |
|
|
| T |
4256199 |
gttgtttacgtgaattttggcagcattacagttatgactccagatcaactgttagagtttgcttggggattggccaatagcaagaaaccatttttgtgta |
4256298 |
T |
|
| Q |
107 |
tcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtccaca |
206 |
Q |
| |
|
|||||||||||||||| |||||||||||||| | |||| ||||||||| |||| |||||||| |||| | ||||||||||| || |
|
|
| T |
4256299 |
tcattaggcctgacctcgtcattggtggctcctttattttgtcatctgag-------------tttcggatagaggactaatcgagagttggtgtccgca |
4256385 |
T |
|
| Q |
207 |
ggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgttgtgt |
306 |
Q |
| |
|
||| |||| |||||||| ||||| | || ||||||||||||||||| |||||||||||||||| |||||| || ||||| |||||||||||||||||| |
|
|
| T |
4256386 |
agagcaagtactgaaccactcttcagttggtggattcttgactcattgaggatggaactcaaccattgaaagcatttgtgccggagttccaatgttgtgt |
4256485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 91 - 266
Target Start/End: Complemental strand, 4568529 - 4568354
Alignment:
| Q |
91 |
aaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattg |
190 |
Q |
| |
|
||||| ||||||||||||||||||||| | |||||||||||||||||||| |||| ||||| ||||||||||||| || ||| ||||||||| ||| | |
|
|
| T |
4568529 |
aaaccttttttgtggatcattaggccttagcttgtcattggtggctcagttattttgtcatccgagtttgtgaatggaacttcggatagaggccaaatag |
4568430 |
T |
|
| Q |
191 |
caagttggtgtccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactc |
266 |
Q |
| |
|
|||| |||||||| || ||| |||| ||||||||||||||| | || |||||||||||||||| ||||||||||| |
|
|
| T |
4568429 |
caagctggtgtccgcaagagcaagtgttgaaccacccttcagttggacgattcttgactcattgtggatggaactc |
4568354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 173 - 307
Target Start/End: Complemental strand, 4493346 - 4493212
Alignment:
| Q |
173 |
cagatagaggcttaattgcaagttggtgtccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccac |
272 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||| |||||| | ||||||||| ||| || || ||||||||||||||||| |||||||||||||| || |
|
|
| T |
4493346 |
cagatagaggcctaattgctagttggtgtccacaagagaaactgctgaaccaccattcgattggtggattcttgactcattgtggatggaactcaactac |
4493247 |
T |
|
| Q |
273 |
tgaaagtatatgtgctggagttccaatgttgtgtt |
307 |
Q |
| |
|
||| |||||||| ||||| ||||||||||||| |
|
|
| T |
4493246 |
caaaaacatatgtgccggagtgccaatgttgtgtt |
4493212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 301
Target Start/End: Original strand, 4391794 - 4391996
Alignment:
| Q |
103 |
tggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagagg-ct---taattgcaagttgg |
198 |
Q |
| |
|
||||||||||||| ||||||||||||||| | ||| ||||| | || ||||| || ||||||||||||||||||||| || || | ||||| ||| |
|
|
| T |
4391794 |
tggatcattaggcttgaccttgtcattggcaggtcatgtgttttgttatatgagtatgagaatgaaatttcagatagaggtctatctagtcgcaagatgg |
4391893 |
T |
|
| Q |
199 |
tgtccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaa |
298 |
Q |
| |
|
||||| | ||| |||| ||||||||||||| ||| | |||||||| || ||||| ||||| |||||| ||| |||||| || ||| || ||||||||| |
|
|
| T |
4391894 |
tgtccgaaagagcaagtattgaaccacccttgaatttgtggattcttaacgcattgtggatgaaactcacccattgaaagcatttgttctagagttccaa |
4391993 |
T |
|
| Q |
299 |
tgt |
301 |
Q |
| |
|
||| |
|
|
| T |
4391994 |
tgt |
4391996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 1281677 - 1281371
Alignment:
| Q |
1 |
agatccgttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttt |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||| |||| ||||| ||||| ||||||||||||||| |||| ||| ||| |||||||||| |
|
|
| T |
1281677 |
agatctgttgtttatgtgaatttcggaagcattacagttatgactccagagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttt |
1281578 |
T |
|
| Q |
101 |
tgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtg |
200 |
Q |
| |
|
||||||||| ||||||||| ||||||||||| |||||||| |||| |||||||| |||| |||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
1281577 |
tgtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtg |
1281478 |
T |
|
| Q |
201 |
tccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatg |
300 |
Q |
| |
|
|||||| |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
1281477 |
tccacaagagaaagtgttgaaccacccttcaatcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagtgccaatg |
1281378 |
T |
|
| Q |
301 |
ttgtgtt |
307 |
Q |
| |
|
||||||| |
|
|
| T |
1281377 |
ttgtgtt |
1281371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 178; Significance: 5e-96; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 2 - 307
Target Start/End: Complemental strand, 1674788 - 1674483
Alignment:
| Q |
2 |
gatccgttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccattttt |
101 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||| ||| |||| ||||| ||||| ||||| ||||||||||| |||||| ||| ||| ||||| ||||| |
|
|
| T |
1674788 |
gatcggttgtttatgtgaatttcggtagcattattgttatgactccagatcaactattggagtttgcttggggtttggccgattgcaagaaacctttttt |
1674689 |
T |
|
| Q |
102 |
gtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgt |
201 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||||||||| ||||| |||||||||||| |||| |||||||||||||||||| |||| ||| ||||||| |
|
|
| T |
1674688 |
gtggatcactaggcctgatcttgtcattggtggctcagtggttttgtcatctgagtttatgaaagaaatttcagatagaggcctaatatcaaattggtgt |
1674589 |
T |
|
| Q |
202 |
ccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgt |
301 |
Q |
| |
|
||||| |||||||| ||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||| ||||| |||||||| ||||||| |
|
|
| T |
1674588 |
ccacaagagaaagtgttgaaccacccttcaatcggcggattcttgacacactgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgt |
1674489 |
T |
|
| Q |
302 |
tgtgtt |
307 |
Q |
| |
|
|||||| |
|
|
| T |
1674488 |
tgtgtt |
1674483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 64 - 305
Target Start/End: Original strand, 20863475 - 20863716
Alignment:
| Q |
64 |
tttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtga |
163 |
Q |
| |
|
||||| ||||| |||||||| ||| ||||| ||||||||||||||||||||||| ||||||||||||||||| || |||| ||||||| |||||||| |
|
|
| T |
20863475 |
tttgcatggggtttggccaacagcaagaaaccctttttgtggatcattaggcctgatcttgtcattggtggctcggtgattttttcatctgcgtttgtga |
20863574 |
T |
|
| Q |
164 |
atgaaatttcagatagaggcttaattgcaagttggtgtccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaa |
263 |
Q |
| |
|
|||||||||||||||||||| |||| || |||||||||||||| ||||| || |||||||| |||||||| || ||||| | |||||||| |||||||| |
|
|
| T |
20863575 |
atgaaatttcagatagaggcctaatcgcgagttggtgtccacaagagaaggtgttgaaccatccttcaattggtggatttctaactcattgtggatggaa |
20863674 |
T |
|
| Q |
264 |
ctcaaccactgaaagtatatgtgctggagttccaatgttgtg |
305 |
Q |
| |
|
|||||||| ||| || |||||||||||||| ||||||||||| |
|
|
| T |
20863675 |
ctcaaccattgagagcatatgtgctggagtgccaatgttgtg |
20863716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 4 - 307
Target Start/End: Original strand, 16685839 - 16686142
Alignment:
| Q |
4 |
tccgttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgt |
103 |
Q |
| |
|
|||||||||||||||||||| || ||||| |||||| |||| ||||| |||| || || ||||||||||| ||| ||||| ||| ||| ||| | |
|
|
| T |
16685839 |
tccgttgtttatgtgaattttgggagcatgacagttatgactgcagaaaaactattagagtttgcttggggtttgaccaatagcaagcaacattttcaat |
16685938 |
T |
|
| Q |
104 |
ggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtcc |
203 |
Q |
| |
|
||||||||||| |||| ||||||||| | || || || ||||| |||||||||||| ||||||||| ||||||||| || |||| || || ||||| || |
|
|
| T |
16685939 |
ggatcattaggtctgatcttgtcatttgcggttccgtggttttgtcatctgagtttaagaatgaaatctcagatagaagcctaatcgcgagctggtgccc |
16686038 |
T |
|
| Q |
204 |
acaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgttg |
303 |
Q |
| |
|
|| ||| |||| || ||||| |||||||| || |||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
16686039 |
gcaagagcaagtattaaaccatccttcaatcggtggattcttaactcattgtggatggaactcaaccactgaaagtatatatgctggagttccaatgttg |
16686138 |
T |
|
| Q |
304 |
tgtt |
307 |
Q |
| |
|
|||| |
|
|
| T |
16686139 |
tgtt |
16686142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 161; Significance: 7e-86; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 7 - 307
Target Start/End: Original strand, 4261 - 4561
Alignment:
| Q |
7 |
gttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtgga |
106 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||| ||||| |||||||| || |||||||||| ||| |||||| || ||| | |||||||||| |
|
|
| T |
4261 |
gttgtttatgtgaattttggaagcattacagttatgactccagatcaactgttagagtttgcttgggttttgaccaattgtaagaaatcctttttgtgga |
4360 |
T |
|
| Q |
107 |
tcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtccaca |
206 |
Q |
| |
|
||||||||||||||||||||||||| ||||| | |||| ||||||||||||| |||||||||||||||||||||| ||||||| || ||||||||||| |
|
|
| T |
4361 |
tcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccaca |
4460 |
T |
|
| Q |
207 |
ggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgttgtgt |
306 |
Q |
| |
|
||| |||| |||||||||||||||| || |||||||||||||||||||||||||||||||||| |||||| ||||||| ||||| |||||||||||| |
|
|
| T |
4461 |
agagcaagtactgaaccacccttcaattggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgtaggagtgccaatgttgtgt |
4560 |
T |
|
| Q |
307 |
t |
307 |
Q |
| |
|
| |
|
|
| T |
4561 |
t |
4561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 7 - 300
Target Start/End: Original strand, 3294 - 3587
Alignment:
| Q |
7 |
gttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtgga |
106 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |||| ||| | |||||||| |||||||||||||| |||||| || ||| ||||| |||||||||| |
|
|
| T |
3294 |
gttgtttatgtgaatttcggcagcattacagttatgactccaaatcaactgttagaatttgcttggggtttggccgatagcaagaaaccgtttttgtgga |
3393 |
T |
|
| Q |
107 |
tcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtccaca |
206 |
Q |
| |
|
||||||||||||| ||||||||||| ||||| | |||| ||||| || |||| |||||||||||||||||||||| |||| |||| ||||||||||| |
|
|
| T |
3394 |
tcattaggcctgatcttgtcattggcggctcgtttattttgtcatcagaatttgagaatgaaatttcagatagaggcctaatcacaagctggtgtccaca |
3493 |
T |
|
| Q |
207 |
ggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatg |
300 |
Q |
| |
|
||| |||| ||| |||||||||||| || ||||||||||||||||| |||||||| |||||||||||||| ||||| |||||||| |||||| |
|
|
| T |
3494 |
agagcaagtactgatccacccttcaattggtggattcttgactcattgtggatggaattcaaccactgaaagcatatgcgctggagtaccaatg |
3587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 139; Significance: 1e-72; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 24103562 - 24103256
Alignment:
| Q |
1 |
agatccgttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttt |
100 |
Q |
| |
|
||||| ||||||||||| ||||| || ||||| |||||| || ||| ||| | || || || ||||||||||| ||||||||| ||| || || |||| |
|
|
| T |
24103562 |
agatcagttgtttatgtaaattttggtagcatcacagttatgtcacgagagaagctcttagagtttgcttggggtttggccaatagcaagaacccttttt |
24103463 |
T |
|
| Q |
101 |
tgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtg |
200 |
Q |
| |
|
||||||| ||||||||||| ||||||||||| |||||||| ||||| |||||||| ||| | || ||| ||||||||||||| |||| ||||||||||| |
|
|
| T |
24103462 |
tgtggataattaggcctgatcttgtcattgggggctcagttgttttgtcatctgatttttttaaagaagtttcagatagaggactaatagcaagttggtg |
24103363 |
T |
|
| Q |
201 |
tccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatg |
300 |
Q |
| |
|
|||||| || ||||| || ||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
24103362 |
tccacaagataaagtgttaaaccacccttcgattggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagtgccaatg |
24103263 |
T |
|
| Q |
301 |
ttgtgtt |
307 |
Q |
| |
|
||||||| |
|
|
| T |
24103262 |
ttgtgtt |
24103256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 78 - 307
Target Start/End: Original strand, 27999745 - 27999974
Alignment:
| Q |
78 |
ggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagat |
177 |
Q |
| |
|
|||||||| ||| ||||| ||||||||||||| ||||||| | |||||||||||||||||||| ||||| |||||||||||| ||| |||||||||||| |
|
|
| T |
27999745 |
ggccaattgcaagaaaccttttttgtggatcactaggcctaatcttgtcattggtggctcagtggttttgtcatctgagtttaggaaagaaatttcagat |
27999844 |
T |
|
| Q |
178 |
agaggcttaattgcaagttggtgtccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaa |
277 |
Q |
| |
|
|||||| |||| ||| |||||||||||| |||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
27999845 |
agaggcctaatatcaaattggtgtccacaagagaaagttttgaaccacccttcaatcagcgggttcttgactcactgcggatggaactcaaccaccgaaa |
27999944 |
T |
|
| Q |
278 |
gtatatgtgctggagttccaatgttgtgtt |
307 |
Q |
| |
|
| ||||| |||||||| ||||||||||||| |
|
|
| T |
27999945 |
gcatatgcgctggagtgccaatgttgtgtt |
27999974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 7 - 307
Target Start/End: Complemental strand, 3086977 - 3086677
Alignment:
| Q |
7 |
gttgtttatgtgaatttcggaagcattacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtgga |
106 |
Q |
| |
|
||||||||||||| ||| || |||||||||||| |||| | ||| ||||| || || ||||||||||| ||||||||| ||| |||||||||||||||| |
|
|
| T |
3086977 |
gttgtttatgtgagttttggcagcattacagttatgactcaagagcaactattagagtttgcttggggtttggccaatagcaagaaaccatttttgtgga |
3086878 |
T |
|
| Q |
107 |
tcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtccaca |
206 |
Q |
| |
|
||||||||||||| ||||||||||| ||||| | || | ||||||||||||| ||| ||||||||||||||||| |||| ||||| |||||||| || |
|
|
| T |
3086877 |
tcattaggcctgatcttgtcattggcggctcctttattatgtcatctgagtttgagaaagaaatttcagatagaggtctaatcgcaagctggtgtccgca |
3086778 |
T |
|
| Q |
207 |
ggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctggagttccaatgttgtgt |
306 |
Q |
| |
|
||| |||| ||||| ||||||||||| || ||||||||||||||||| |||||||||||||| |||||| || ||||||||| |||||||||||| |
|
|
| T |
3086777 |
agagcaagtattgaatcacccttcaattggtggattcttgactcattgtggatggaactcaacggttgaaagcgtacttgctggagtgccaatgttgtgt |
3086678 |
T |
|
| Q |
307 |
t |
307 |
Q |
| |
|
| |
|
|
| T |
3086677 |
t |
3086677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 300
Target Start/End: Original strand, 3443 - 3552
Alignment:
| Q |
190 |
gcaagttggtgtccacaggagaaagttttgaaccacccttcaataggcggattcttgactcattgcggatggaactcaaccactgaaagtatatgtgctg |
289 |
Q |
| |
|
||||| |||||||| | ||| |||| ||||||||||||| | | || |||||||| |||||||| |||||||||||||||| |||||| || ||| ||| |
|
|
| T |
3443 |
gcaagatggtgtccgtaagagcaagtgttgaaccaccctt-agttggtggattcttaactcattgtggatggaactcaaccattgaaagcatttgttctg |
3541 |
T |
|
| Q |
290 |
gagttccaatg |
300 |
Q |
| |
|
||||||||||| |
|
|
| T |
3542 |
gagttccaatg |
3552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 183
Target Start/End: Original strand, 3168 - 3260
Alignment:
| Q |
91 |
aaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggc |
183 |
Q |
| |
|
||||| ||| |||||||||||||| |||||||||||||||| || ||| | ||| | || |||||||| |||||||| ||||||||||||| |
|
|
| T |
3168 |
aaaccctttgtgtggatcattaggtctgaccttgtcattggcggatcatgtgctttgttatatgagtttgagaatgaaacttcagatagaggc |
3260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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