View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10481A_low_131 (Length: 349)

Name: NF10481A_low_131
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10481A_low_131
NF10481A_low_131
[»] chr1 (52 HSPs)
chr1 (28-349)||(4955992-4956292)
chr1 (27-134)||(22077551-22077658)
chr1 (27-136)||(22077885-22077993)
chr1 (27-134)||(5320021-5320128)
chr1 (27-129)||(44290514-44290616)
chr1 (27-134)||(66528-66635)
chr1 (27-134)||(24600370-24600477)
chr1 (27-128)||(3550721-3550822)
chr1 (27-104)||(22077166-22077243)
chr1 (28-129)||(44290882-44290983)
chr1 (27-134)||(3875387-3875494)
chr1 (27-134)||(17294572-17294679)
chr1 (27-134)||(26661578-26661685)
chr1 (27-134)||(34364502-34364609)
chr1 (27-134)||(34364920-34365027)
chr1 (27-134)||(39066256-39066363)
chr1 (35-134)||(41184489-41184588)
chr1 (23-119)||(5528806-5528902)
chr1 (27-134)||(37556106-37556213)
chr1 (27-134)||(31767217-31767324)
chr1 (28-131)||(41142370-41142473)
chr1 (27-134)||(41156986-41157093)
chr1 (27-122)||(50052079-50052174)
chr1 (28-134)||(1188645-1188751)
chr1 (27-129)||(32594772-32594874)
chr1 (27-134)||(66143-66252)
chr1 (18-122)||(24132033-24132136)
chr1 (27-131)||(30630694-30630798)
chr1 (35-134)||(44685451-44685551)
chr1 (27-134)||(40082402-40082508)
chr1 (27-134)||(41157370-41157477)
chr1 (52-134)||(21378122-21378204)
chr1 (52-129)||(3537228-3537305)
chr1 (27-134)||(29798194-29798301)
chr1 (54-133)||(45084378-45084457)
chr1 (27-106)||(48588544-48588623)
chr1 (27-121)||(14318875-14318969)
chr1 (27-129)||(41759483-41759585)
chr1 (27-107)||(3537655-3537735)
chr1 (27-134)||(19283511-19283618)
chr1 (27-133)||(11977276-11977382)
chr1 (52-134)||(37850681-37850763)
chr1 (47-135)||(1187440-1187528)
chr1 (60-103)||(5575130-5575173)
chr1 (27-134)||(26661954-26662061)
chr1 (56-134)||(4878798-4878876)
chr1 (27-95)||(9955942-9956011)
chr1 (22-127)||(34649440-34649545)
chr1 (27-107)||(38804411-38804491)
chr1 (47-134)||(22793273-22793360)
chr1 (27-92)||(44043828-44043893)
chr1 (46-134)||(24448272-24448360)
[»] chr4 (67 HSPs)
chr4 (27-134)||(3244505-3244612)
chr4 (27-134)||(25483331-25483438)
chr4 (27-134)||(36629232-36629339)
chr4 (27-134)||(4955371-4955478)
chr4 (27-134)||(10245915-10246021)
chr4 (27-134)||(32941177-32941284)
chr4 (27-134)||(34646703-34646810)
chr4 (31-134)||(52884882-52884985)
chr4 (55-134)||(54741260-54741339)
chr4 (27-129)||(55933178-55933280)
chr4 (27-128)||(16889590-16889691)
chr4 (27-132)||(54017649-54017754)
chr4 (27-107)||(44621024-44621104)
chr4 (27-134)||(1731701-1731808)
chr4 (27-134)||(39792914-39793021)
chr4 (60-134)||(2740695-2740769)
chr4 (27-129)||(41370357-41370459)
chr4 (27-129)||(50630809-50630911)
chr4 (27-128)||(16888870-16888971)
chr4 (27-131)||(2741069-2741173)
chr4 (27-131)||(23556920-23557024)
chr4 (27-134)||(43174501-43174609)
chr4 (27-107)||(54108935-54109014)
chr4 (27-134)||(22028015-22028122)
chr4 (35-134)||(49076510-49076609)
chr4 (27-131)||(49302902-49303008)
chr4 (27-134)||(50002421-50002528)
chr4 (47-122)||(50459728-50459803)
chr4 (31-134)||(52884690-52884793)
chr4 (47-137)||(34004658-34004747)
chr4 (27-129)||(49880160-49880262)
chr4 (27-120)||(44620362-44620455)
chr4 (27-107)||(45496827-45496907)
chr4 (27-107)||(54936218-54936298)
chr4 (27-134)||(3340802-3340909)
chr4 (27-134)||(22183318-22183425)
chr4 (52-134)||(10246342-10246424)
chr4 (32-134)||(41707523-41707625)
chr4 (53-122)||(6975536-6975605)
chr4 (27-95)||(22028423-22028491)
chr4 (30-134)||(36572014-36572118)
chr4 (27-106)||(18932803-18932882)
chr4 (27-122)||(20825843-20825938)
chr4 (27-134)||(36608715-36608822)
chr4 (27-134)||(39404013-39404120)
chr4 (31-134)||(39404393-39404496)
chr4 (27-134)||(44620655-44620761)
chr4 (28-134)||(51768115-51768221)
chr4 (27-76)||(31691205-31691254)
chr4 (54-134)||(3341123-3341203)
chr4 (55-107)||(54017784-54017836)
chr4 (27-134)||(28034224-28034331)
chr4 (63-134)||(45489421-45489492)
chr4 (60-107)||(54343088-54343135)
chr4 (60-134)||(3700360-3700434)
chr4 (61-134)||(4390189-4390262)
chr4 (27-75)||(23817735-23817783)
chr4 (30-134)||(49076888-49076991)
chr4 (27-122)||(20826224-20826319)
chr4 (61-104)||(39699034-39699077)
chr4 (63-134)||(44621421-44621492)
chr4 (27-101)||(54108564-54108639)
chr4 (44-122)||(760196-760274)
chr4 (27-108)||(3271805-3271889)
chr4 (34-108)||(34544127-34544201)
chr4 (63-121)||(44620304-44620362)
chr4 (27-108)||(15841422-15841503)
[»] chr2 (53 HSPs)
chr2 (27-134)||(28254293-28254400)
chr2 (27-134)||(15880258-15880365)
chr2 (27-134)||(28531370-28531477)
chr2 (27-134)||(962593-962700)
chr2 (27-129)||(36178661-36178763)
chr2 (27-127)||(6421387-6421487)
chr2 (27-129)||(14745723-14745825)
chr2 (44-134)||(31899499-31899589)
chr2 (28-134)||(36005937-36006042)
chr2 (27-129)||(37106188-37106290)
chr2 (27-129)||(41283531-41283633)
chr2 (27-132)||(7598225-7598330)
chr2 (27-108)||(28254168-28254249)
chr2 (27-134)||(30313173-30313279)
chr2 (27-134)||(33561507-33561614)
chr2 (27-134)||(42514644-42514751)
chr2 (27-134)||(31468806-31468909)
chr2 (27-129)||(37105924-37106026)
chr2 (48-132)||(1769889-1769973)
chr2 (27-134)||(16542444-16542551)
chr2 (27-134)||(29873593-29873700)
chr2 (27-134)||(35580780-35580886)
chr2 (27-134)||(38796676-38796783)
chr2 (27-134)||(40679685-40679792)
chr2 (54-132)||(7598606-7598684)
chr2 (27-136)||(40733510-40733619)
chr2 (52-127)||(6712978-6713053)
chr2 (27-122)||(14745350-14745445)
chr2 (27-122)||(33731655-33731750)
chr2 (27-134)||(37895117-37895224)
chr2 (27-129)||(5542681-5542783)
chr2 (27-129)||(5543054-5543156)
chr2 (27-129)||(36178325-36178427)
chr2 (60-134)||(38796307-38796381)
chr2 (34-134)||(12529091-12529191)
chr2 (27-134)||(15511551-15511656)
chr2 (27-107)||(36178227-36178307)
chr2 (27-134)||(9231244-9231351)
chr2 (27-134)||(37632653-37632760)
chr2 (64-107)||(40163466-40163509)
chr2 (27-107)||(6422132-6422212)
chr2 (27-134)||(12910223-12910330)
chr2 (27-134)||(30323459-30323566)
chr2 (27-134)||(23346230-23346338)
chr2 (72-134)||(36785664-36785726)
chr2 (44-121)||(29676543-29676620)
chr2 (27-136)||(40733876-40733984)
chr2 (44-136)||(37894765-37894857)
chr2 (67-107)||(42515038-42515078)
chr2 (27-134)||(33953827-33953934)
chr2 (27-133)||(29874079-29874185)
chr2 (27-105)||(31259672-31259750)
chr2 (61-134)||(29676898-29676971)
[»] chr6 (39 HSPs)
chr6 (27-134)||(10074419-10074526)
chr6 (28-134)||(10074048-10074154)
chr6 (27-134)||(16107673-16107780)
chr6 (27-129)||(3409259-3409361)
chr6 (27-129)||(35210204-35210306)
chr6 (28-122)||(9062407-9062500)
chr6 (27-129)||(14748394-14748496)
chr6 (27-129)||(29518503-29518605)
chr6 (27-129)||(29518920-29519022)
chr6 (27-129)||(32741179-32741281)
chr6 (27-127)||(2377756-2377856)
chr6 (27-122)||(2843561-2843657)
chr6 (27-134)||(2579928-2580035)
chr6 (27-122)||(32460636-32460731)
chr6 (27-129)||(2378126-2378228)
chr6 (33-95)||(10911600-10911662)
chr6 (31-132)||(5958663-5958764)
chr6 (27-134)||(10073672-10073777)
chr6 (28-130)||(593766-593868)
chr6 (27-129)||(3058226-3058328)
chr6 (27-129)||(3409660-3409762)
chr6 (44-134)||(16108058-16108148)
chr6 (27-107)||(1127382-1127462)
chr6 (27-134)||(2578499-2578605)
chr6 (27-134)||(12092538-12092645)
chr6 (27-129)||(1846748-1846850)
chr6 (28-122)||(2579549-2579643)
chr6 (27-129)||(26544049-26544151)
chr6 (27-107)||(16454929-16455009)
chr6 (27-122)||(3415465-3415560)
chr6 (27-134)||(8481922-8482028)
chr6 (46-122)||(17135144-17135220)
chr6 (27-134)||(2578891-2578997)
chr6 (27-134)||(6071127-6071234)
chr6 (27-134)||(16454570-16454677)
chr6 (53-107)||(5832108-5832162)
chr6 (61-122)||(1950275-1950336)
chr6 (52-94)||(14789285-14789327)
chr6 (78-134)||(33605649-33605705)
[»] chr8 (60 HSPs)
chr8 (27-133)||(34835205-34835311)
chr8 (33-134)||(41972153-41972254)
chr8 (27-135)||(45122113-45122221)
chr8 (27-129)||(3669687-3669789)
chr8 (29-139)||(9608735-9608845)
chr8 (34-107)||(5420673-5420746)
chr8 (27-136)||(40518575-40518684)
chr8 (27-122)||(147458-147553)
chr8 (27-134)||(3038346-3038453)
chr8 (27-134)||(4154722-4154829)
chr8 (27-134)||(9309350-9309457)
chr8 (27-134)||(30359266-30359373)
chr8 (27-106)||(33113423-33113502)
chr8 (27-134)||(34834871-34834978)
chr8 (27-133)||(34835470-34835577)
chr8 (27-133)||(34835736-34835843)
chr8 (28-131)||(45121967-45122070)
chr8 (31-127)||(25561876-25561972)
chr8 (29-105)||(45122648-45122724)
chr8 (27-122)||(70330-70425)
chr8 (27-106)||(9609108-9609187)
chr8 (27-129)||(1013927-1014029)
chr8 (27-129)||(1014301-1014403)
chr8 (52-134)||(8794106-8794188)
chr8 (31-134)||(9308972-9309077)
chr8 (44-122)||(9482677-9482755)
chr8 (27-104)||(9483243-9483320)
chr8 (27-134)||(6876918-6877026)
chr8 (27-127)||(40579562-40579662)
chr8 (27-122)||(43398124-43398222)
chr8 (27-134)||(8918820-8918927)
chr8 (27-134)||(30359604-30359711)
chr8 (27-122)||(43274835-43274930)
chr8 (27-129)||(3670060-3670162)
chr8 (44-134)||(9620749-9620839)
chr8 (27-134)||(40518064-40518173)
chr8 (27-92)||(18372050-18372115)
chr8 (27-116)||(20870629-20870718)
chr8 (28-107)||(1513972-1514051)
chr8 (23-134)||(4154333-4154443)
chr8 (64-131)||(18372349-18372416)
chr8 (60-131)||(18372788-18372859)
chr8 (44-103)||(18373004-18373063)
chr8 (52-122)||(41416252-41416322)
chr8 (27-92)||(9507819-9507884)
chr8 (27-129)||(30441081-30441187)
chr8 (44-103)||(18372676-18372734)
chr8 (46-116)||(3037783-3037853)
chr8 (49-134)||(12283868-12283953)
chr8 (63-107)||(25561736-25561780)
chr8 (27-107)||(37544546-37544626)
chr8 (27-122)||(32640588-32640678)
chr8 (52-107)||(45121737-45121792)
chr8 (27-133)||(45123002-45123106)
chr8 (27-122)||(18371717-18371807)
chr8 (60-134)||(33831973-33832047)
chr8 (27-68)||(5915928-5915969)
chr8 (78-134)||(147824-147880)
chr8 (78-134)||(20995508-20995564)
chr8 (47-103)||(32305503-32305559)
[»] chr3 (54 HSPs)
chr3 (27-131)||(21832399-21832503)
chr3 (27-134)||(15773187-15773294)
chr3 (27-134)||(37990695-37990802)
chr3 (27-134)||(12114618-12114725)
chr3 (27-134)||(25739481-25739588)
chr3 (27-134)||(37991033-37991140)
chr3 (27-134)||(43346847-43346954)
chr3 (27-134)||(49336743-49336850)
chr3 (28-134)||(35946517-35946623)
chr3 (27-134)||(33175717-33175827)
chr3 (45-129)||(51886561-51886645)
chr3 (27-134)||(29644637-29644744)
chr3 (27-134)||(29644958-29645065)
chr3 (27-129)||(22304569-22304671)
chr3 (28-134)||(25755389-25755495)
chr3 (53-134)||(9240144-9240225)
chr3 (27-132)||(15772851-15772956)
chr3 (27-107)||(41359821-41359901)
chr3 (27-134)||(45901708-45901816)
chr3 (27-133)||(1634370-1634477)
chr3 (27-134)||(8327899-8328006)
chr3 (27-134)||(33803308-33803415)
chr3 (27-106)||(39935011-39935090)
chr3 (27-134)||(42342146-42342253)
chr3 (27-134)||(42342444-42342551)
chr3 (27-134)||(52634671-52634777)
chr3 (27-134)||(54017872-54017979)
chr3 (27-129)||(4823655-4823757)
chr3 (27-134)||(32462956-32463064)
chr3 (27-90)||(32589742-32589805)
chr3 (27-134)||(47964971-47965078)
chr3 (27-134)||(53577359-53577466)
chr3 (27-129)||(39389070-39389172)
chr3 (52-134)||(39914247-39914329)
chr3 (32-137)||(39336290-39336395)
chr3 (53-129)||(50612534-50612610)
chr3 (46-121)||(7767389-7767464)
chr3 (55-134)||(31190012-31190091)
chr3 (27-134)||(53118031-53118137)
chr3 (27-132)||(3384322-3384427)
chr3 (23-103)||(33362345-33362425)
chr3 (61-129)||(37726504-37726572)
chr3 (27-131)||(54018254-54018358)
chr3 (27-122)||(3135129-3135224)
chr3 (62-133)||(11661531-11661602)
chr3 (52-107)||(42584903-42584958)
chr3 (27-134)||(45395709-45395816)
chr3 (32-134)||(44160605-44160707)
chr3 (27-134)||(47964574-47964681)
chr3 (22-122)||(11661958-11662059)
chr3 (73-134)||(43346645-43346706)
chr3 (27-76)||(52634993-52635042)
chr3 (90-134)||(12747871-12747915)
chr3 (27-71)||(22303715-22303759)
[»] scaffold0078 (2 HSPs)
scaffold0078 (27-134)||(5352-5459)
scaffold0078 (27-134)||(4977-5084)
[»] chr7 (44 HSPs)
chr7 (27-134)||(7517575-7517682)
chr7 (27-134)||(30245072-30245179)
chr7 (27-134)||(23433-23540)
chr7 (27-134)||(1085672-1085779)
chr7 (27-134)||(16569191-16569298)
chr7 (27-134)||(16596364-16596471)
chr7 (44-134)||(28301616-28301706)
chr7 (28-129)||(37533067-37533168)
chr7 (27-134)||(7554020-7554127)
chr7 (27-134)||(22566718-22566825)
chr7 (27-134)||(22567095-22567201)
chr7 (27-134)||(30244265-30244372)
chr7 (27-134)||(45434631-45434738)
chr7 (28-134)||(43241490-43241596)
chr7 (27-119)||(6054570-6054662)
chr7 (28-136)||(40230348-40230456)
chr7 (27-134)||(118357-118464)
chr7 (27-122)||(11845198-11845293)
chr7 (27-134)||(24177430-24177537)
chr7 (27-122)||(34218090-34218185)
chr7 (27-134)||(40094830-40094937)
chr7 (27-134)||(45433236-45433343)
chr7 (27-121)||(19122740-19122833)
chr7 (29-127)||(47129097-47129195)
chr7 (27-134)||(8128497-8128604)
chr7 (29-136)||(36622953-36623060)
chr7 (27-134)||(45754711-45754817)
chr7 (27-129)||(29157565-29157667)
chr7 (27-136)||(9901638-9901745)
chr7 (61-134)||(36109007-36109080)
chr7 (27-122)||(20599321-20599416)
chr7 (28-131)||(36939790-36939893)
chr7 (27-122)||(37533420-37533515)
chr7 (27-104)||(1085304-1085381)
chr7 (62-134)||(30245489-30245561)
chr7 (62-134)||(30255334-30255406)
chr7 (27-129)||(14681510-14681612)
chr7 (60-134)||(30244696-30244770)
chr7 (27-87)||(30253534-30253594)
chr7 (46-134)||(41910669-41910757)
chr7 (52-134)||(36534865-36534947)
chr7 (27-119)||(24838757-24838850)
chr7 (27-134)||(37345911-37346020)
chr7 (86-134)||(36967344-36967392)
[»] chr5 (48 HSPs)
chr5 (27-134)||(26074607-26074714)
chr5 (27-122)||(41170641-41170736)
chr5 (27-134)||(41632777-41632884)
chr5 (28-134)||(26075219-26075325)
chr5 (27-122)||(9498710-9498805)
chr5 (27-134)||(26074202-26074309)
chr5 (27-133)||(40296371-40296477)
chr5 (27-134)||(11417033-11417138)
chr5 (27-127)||(18603176-18603276)
chr5 (27-134)||(299484-299591)
chr5 (27-134)||(6224191-6224298)
chr5 (27-134)||(13415816-13415923)
chr5 (27-134)||(15370094-15370201)
chr5 (27-134)||(36568623-36568730)
chr5 (27-129)||(6500451-6500552)
chr5 (27-129)||(6500823-6500924)
chr5 (44-134)||(31509618-31509708)
chr5 (27-129)||(32487394-32487495)
chr5 (34-107)||(42508634-42508707)
chr5 (52-134)||(1028598-1028680)
chr5 (32-134)||(3295405-3295506)
chr5 (29-133)||(3295073-3295176)
chr5 (27-107)||(34753081-34753161)
chr5 (28-136)||(35150000-35150107)
chr5 (27-134)||(12662708-12662815)
chr5 (47-134)||(36492293-36492380)
chr5 (27-106)||(2411030-2411109)
chr5 (27-106)||(25327958-25328037)
chr5 (52-127)||(26074320-26074395)
chr5 (67-122)||(38427555-38427610)
chr5 (27-134)||(42405652-42405759)
chr5 (28-134)||(26074839-26074945)
chr5 (27-129)||(26590966-26591068)
chr5 (39-121)||(35914857-35914939)
chr5 (53-127)||(42524719-42524792)
chr5 (52-129)||(27502117-27502194)
chr5 (44-108)||(31509752-31509816)
chr5 (27-129)||(623818-623920)
chr5 (27-129)||(624196-624298)
chr5 (27-129)||(29549311-29549413)
chr5 (27-92)||(15370439-15370504)
chr5 (27-134)||(24489262-24489367)
chr5 (27-107)||(33747793-33747873)
chr5 (27-134)||(36521952-36522059)
chr5 (27-122)||(36522293-36522388)
chr5 (27-121)||(41635247-41635341)
chr5 (27-100)||(19275558-19275630)
chr5 (54-106)||(7768873-7768925)
[»] scaffold0734 (2 HSPs)
scaffold0734 (44-134)||(5772-5862)
scaffold0734 (34-134)||(5391-5491)
[»] scaffold0702 (2 HSPs)
scaffold0702 (27-127)||(570-670)
scaffold0702 (60-129)||(231-300)
[»] scaffold0391 (2 HSPs)
scaffold0391 (27-134)||(1162-1269)
scaffold0391 (77-134)||(3091-3148)
[»] scaffold0027 (1 HSPs)
scaffold0027 (28-133)||(47356-47461)
[»] scaffold0171 (1 HSPs)
scaffold0171 (34-134)||(17519-17619)
[»] scaffold0504 (1 HSPs)
scaffold0504 (52-127)||(10192-10267)


Alignment Details
Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 28 - 349
Target Start/End: Complemental strand, 4956292 - 4955992
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||| |||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |                     ||    
T  4956292 ttacctaaaactttagagcaatgagtttatggatcctcttacttataagatgttcaacctttacttttctatccgtt---------------------tg 4956214  T
Q  128 cacacaatagaactacatgctacaacctatatttcctttctctacttttttagaactgcatgcaagttctaagaacttaccagaaatctttgttgcnnnn 227  Q
    |||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  4956213 cacacaatagaactacctgctgccacctatatttcctttctctacttttttagaactgcatgcaagttctaagaacttaccagaaatctttgttgcaaaa 4956114  T
Q  228 nnngtttaataaaagcaagagttgtcatcttttgacctaaaaactagattagacaaattaataatacttaactttaatttttgaaaaagaataatcataa 327  Q
       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4956113 aaagtttaataaaagcaagagttgtcatcttttgacctaaaaactagattagacaaattaataatacttaactttaatttttgaaaaagaataatcataa 4956014  T
Q  328 acggatatagatatgaatttga 349  Q
    || |||||||||||| ||||||    
T  4956013 acagatatagatatggatttga 4955992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 22077551 - 22077658
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||| | ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||| |||    
T  22077551 cttacccaaaaccttaaggctacgagtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataactcacactt 22077650  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  22077651 gcacacaa 22077658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 27 - 136
Target Start/End: Original strand, 22077885 - 22077993
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    ||||||| |||| ||||| | ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| | || |||||||||||| |||    
T  22077885 cttaccccaaaccttagg-ctatgagtttatgggtcctcttacttataagatgttcaacctttatttttctatccgatttaaaacatataactcacactt 22077983  T
Q  127 gcacacaata 136  Q
    ||||||||||    
T  22077984 gcacacaata 22077993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 5320021 - 5320128
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||| ||||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||||| | |||||||||||| |||    
T  5320021 cttacccaaaaccttaaggctatgagtttatgggtcctctcacttataaggtgttcaacttttacttttctatccgatgtggaacatataactcacactt 5320120  T
Q  127 gcacacaa 134  Q
    ||| ||||    
T  5320121 gcatacaa 5320128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 44290514 - 44290616
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| || |||||||||||   |||||||||||| |||    
T  44290514 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcacactt 44290613  T
Q  127 gca 129  Q
    |||    
T  44290614 gca 44290616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 66528 - 66635
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||| ||  |||||||  |||||||||||||||| ||||||||||||||||||||||||||| || | |||||||||||| |||    
T  66528 cttacccaaaaccttaaggccatatgtttatggatcctcttacttataaggtgttcaacctttacttttctatccgatatggaacatataactcacactt 66627  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  66628 gcacacaa 66635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 24600370 - 24600477
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    ||||| |||||| ||| | ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||| ||   |||||||||||| |||    
T  24600370 cttacacaaaaccttaagacaatgagtttatgagttctcttacttataatatgttcaacctttacttttctatccgatatgggacatataactcacactt 24600469  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  24600470 gcacacaa 24600477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 3550822 - 3550721
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||| ||||||   |||||||||||| |||    
T  3550822 cttacccaaaactttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacactt 3550723  T
Q  127 gc 128  Q
    ||    
T  3550722 gc 3550721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 22077166 - 22077243
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgat 104  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||    
T  22077166 cttatccaaaaccttagggcaatgagtttatgggtcctcttacttataaggtattcaacctttacttttctatccgat 22077243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 44290882 - 44290983
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||    
T  44290882 ttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttg 44290981  T
Q  128 ca 129  Q
    ||    
T  44290982 ca 44290983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 3875387 - 3875494
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||| ||||| ||| ||||||| ||||||| ||||||||||||||||| ||| |||||||||||||| |||||||||||   ||||||||| || |||    
T  3875387 cttacctaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtacaacctttacttttttatccgatgtgtgacatataactgactctt 3875486  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  3875487 gcacacaa 3875494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 17294679 - 17294572
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||  ||||||||||||||| || |||||||||||   |||||||||||| |||    
T  17294679 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatccgatgtgggacatataactcacactt 17294580  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  17294579 gtacacaa 17294572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 26661578 - 26661685
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||||||||||| ||||||| ||||||||| ||||||||||||||| || || ||||||||   |||||||||||| |||    
T  26661578 cttacccaaaaccttaaggcaatgagtttatgggtcctctcacttataaggtgttcaacctttactcttttacccgatgtgggacatataactcacactt 26661677  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  26661678 gtacacaa 26661685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 34364609 - 34364502
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||| ||| ||||| |  |||||||||||||||| ||||||||||||||| || ||||||||||||  |||||||||||| |||    
T  34364609 cttacccaaaaccttaaggctatgggtttacggatcctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacactt 34364510  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  34364509 gcacacaa 34364502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 34365027 - 34364920
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||| ||| ||||||| ||||||||||||||||| ||||||||||||| | || |||||||||||   |||||||||||| |||    
T  34365027 cttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaacctttattattttatccgatgtgtgacatataactcacactt 34364928  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  34364927 gcacacaa 34364920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 39066256 - 39066363
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||| ||||||| ||| | |||||| |||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||| |  ||||||||||| |||    
T  39066256 cttatccaaaaccttaagacaatgattttatgggtcatcttagttataaggtgttcaacctttacttttctatccgatgtggaatatataactcacactt 39066355  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  39066356 gcacacaa 39066363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 35 - 134
Target Start/End: Original strand, 41184489 - 41184588
Alignment:
Q  35 aaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    |||| ||| ||||||| ||||||| ||||||||||||||||  ||||||||||||||| || ||||||||||||  |||||||||||| |||||||||||    
T  41184489 aaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaa 41184588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 5528806 - 5528902
Alignment:
Q  23 cacacttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataact 119  Q
    |||| ||||||||||| ||| |  |||||||||||| ||||||||| ||||||||||||||||||||||| || ||||||||||||  |||||||||    
T  5528806 cacatttacccaaaaccttaagaaaatgagtttatgagtcctcttatttataagatgttcaacctttactcttttatccgatgtgagacatataact 5528902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 37556213 - 37556106
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact-tttctatccgatgtgaagcatataactcaccct 125  Q
    |||||||||||| ||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||   |||||||||||| ||    
T  37556213 cttacccaaaaccttaaggctatgggtttatg-gtcctcttacttataagatgttcaacctttactatttttatccgatgtgggacatataactcacact 37556115  T
Q  126 tgcacacaa 134  Q
    || ||||||    
T  37556114 tgtacacaa 37556106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 31767217 - 31767324
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| |||| |  ||| ||| ||||||||||||||||| ||||||||||||||| || ||||||||||| | |||||||| ||| |||    
T  31767217 cttacccaaaaccttaaggcattaggttaatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtggaacatataacccacactt 31767316  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  31767317 gcacacaa 31767324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 41142473 - 41142370
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||| ||||| ||| ||||||| ||||||| ||||| ||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||    
T  41142473 ttaccaaaaaccttaaggcaatgggtttatgggtccttttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttg 41142374  T
Q  128 caca 131  Q
    ||||    
T  41142373 caca 41142370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 41157093 - 41156986
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| |||  |||||||||||||| ||||||||||||||||| ||||||||||||||| || |||||| | ||   ||||||| |||| |||    
T  41157093 cttacccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgttatgggacatataattcacactt 41156994  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  41156993 gcacacaa 41156986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 50052079 - 50052174
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||||||||||||| |  |||  ||||||| ||||||||||||||||||||||||||||||||| || |||||||||||   ||||||||||||    
T  50052079 cttacccaaaactttaagaaaataggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcac 50052174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 1188645 - 1188751
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||||||||| |||  |||||||||||||| ||| ||| |||||||| || ||||||||  ||||||||||||||| || | |||||||||||| ||||    
T  1188645 ttacccaaaaccttaaagcaatgagtttatgagtcttctcacttataaaatattcaacctccacttttctatccgatatggaacatataactcacacttg 1188744  T
Q  128 cacacaa 134  Q
    |||||||    
T  1188745 cacacaa 1188751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 32594772 - 32594874
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| | ||||||||||||| ||||||||||||||||| ||||||||||||||| || |||| |||||    |||||||||||| |||    
T  32594772 cttacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtaggacatataactcacactt 32594871  T
Q  127 gca 129  Q
    |||    
T  32594872 gca 32594874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 66143 - 66252
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttc-aacctttacttttctatccgatgtgaagcat-ataactcaccc 124  Q
    |||||||||||| ||| ||| ||  ||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||  ||| || |||||| |    
T  66143 cttacccaaaaccttaaggccataggtttatgggtcctcttacttataaggtgttcaaacctttacttttctatccgatgtgagacatgattactcacac 66242  T
Q  125 ttgcacacaa 134  Q
    ||||||||||    
T  66243 ttgcacacaa 66252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 24132033 - 24132136
Alignment:
Q  18 gacatcacacttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataa 117  Q
    |||| |||||||||||||| ||| ||| |||||||||||||  ||| |||| ||||||| |||||||||||||||||||||||||||| |   |||||||    
T  24132033 gacaccacacttacccaaaccttaagg-caatgagtttatggatccccttatttataaggtgttcaacctttacttttctatccgatgagggacatataa 24132131  T
Q  118 ctcac 122  Q
    |||||    
T  24132132 ctcac 24132136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 30630694 - 30630798
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||||||| ||||||| ||||||| || |||||||||||||  |||  |||||||| |||| ||||||||||||  ||||||| |||| |||    
T  30630694 cttacccaaaactttaaggcaatgtgtttatgggttctcttacttataaagtgtcaaacctttaattttttatccgatgtgagacatataaatcacactt 30630793  T
Q  127 gcaca 131  Q
    |||||    
T  30630794 gcaca 30630798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 35 - 134
Target Start/End: Complemental strand, 44685551 - 44685451
Alignment:
Q  35 aaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaa-cctttacttttctatccgatgtgaagcatataactcacccttgcacaca 133  Q
    |||| ||| ||||||||||||||  ||||||||||||||||| | ||||| |||||||||||||||||||| ||   |||||||||||| ||||||||||    
T  44685551 aaacattaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 44685452  T
Q  134 a 134  Q
    |    
T  44685451 a 44685451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 40082508 - 40082402
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| |||||||| ||||||  |||||||||||||||| ||||||||||||||| || ||||||||||    |||||||||||| |||    
T  40082508 cttacccaaaaccttaaggcaatgaatttatga-tcctcttacttataaggtgttcaacctttactattttatccgatgtaggacatataactcacactt 40082410  T
Q  127 gcacacaa 134  Q
    || |||||    
T  40082409 gcgcacaa 40082402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 41157477 - 41157370
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    ||||| |||||| | | ||||||| ||||||| ||||||||||||||||| |||||||| |||||| || |||| ||||||   |||||||||||| |||    
T  41157477 cttactcaaaacctaaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttactcttttatctgatgtgggacatataactcacactt 41157378  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  41157377 gcacacaa 41157370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 52 - 134
Target Start/End: Original strand, 21378122 - 21378204
Alignment:
Q  52 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||||||||| ||   ||||||||| || |||||||||||    
T  21378122 gtttatgggtcctcttacttataagatattcaacctttactgttctatccgatctgggacatataactgacacttgcacacaa 21378204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 3537228 - 3537305
Alignment:
Q  52 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 129  Q
    ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  3537228 gtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 3537305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 29798301 - 29798194
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||| |||| || ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||||| ||||    |||||||||||| |||    
T  29798301 cttatccaagaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatccaatgtaggacatataactcacactt 29798202  T
Q  127 gcacacaa 134  Q
    ||| ||||    
T  29798201 gcatacaa 29798194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 45084457 - 45084378
Alignment:
Q  54 ttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacaca 133  Q
    ||||| ||||||||||||||||| ||||||||||||||| || |||||||||||    ||||||||||| ||||||||||    
T  45084457 ttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggagatataactcacacttgcacaca 45084378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 48588544 - 48588623
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 106  Q
    |||||||||||| ||| |||||||| |||| | ||| ||||||||||||| ||||||||||||||| || ||||||||||    
T  48588544 cttacccaaaaccttaaggcaatgaatttacgggtcttcttacttataaggtgttcaacctttactattttatccgatgt 48588623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 14318969 - 14318875
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactca 121  Q
    |||||||||||| ||| ||||||   |||||| ||| ||||||||||||| ||||||||||||||| || ||||||| ||| | |||||||||||    
T  14318969 cttacccaaaaccttaaggcaatagatttatgggtcttcttacttataaggtgttcaacctttactattttatccgacgtggaacatataactca 14318875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 41759585 - 41759483
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| |||||||  ||||||  || ||||||||||||| |||||||| |||||| || |||||||||||   |||||||||||| |||    
T  41759585 cttacccaaaaccttaaggcaatggatttatggatcatcttacttataaggtgttcaacttttactattttatccgatgtgtgacatataactcacactt 41759486  T
Q  127 gca 129  Q
    |||    
T  41759485 gca 41759483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 3537655 - 3537735
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    |||||||||||| ||| | ||||| ||||||  ||||||||||| ||||| ||||||||||||||| || |||||||||||    
T  3537655 cttacccaaaaccttaagccaatgggtttataggtcctcttactcataaggtgttcaacctttactattttatccgatgtg 3537735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 19283511 - 19283618
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||| ||||||| ||| ||| ||||||||||||||||||| | ||| ||  || |||||||  ||||||||||||| ||||   |||||||||||| |||    
T  19283511 cttatccaaaaccttaaggcgatgagtttatgtgtcctctcatttacaaagtgctcaacctccacttttctatccggtgtgggacatataactcacactt 19283610  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  19283611 gcacacaa 19283618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 11977382 - 11977276
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| |||| |  ||||||| || |||||||||||||| |||||||| |||||| || || ||||||||   |||||||||||| |||    
T  11977382 cttacccaaaaccttaaggcattaggtttatgagtgctcttacttataaggtgttcaacatttactgttttacccgatgtgggacatataactcacactt 11977283  T
Q  127 gcacaca 133  Q
    | |||||    
T  11977282 gtacaca 11977276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 134
Target Start/End: Original strand, 37850681 - 37850763
Alignment:
Q  52 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||| || |||||||||||||| |||||||||| |||| || ||| |||||||   |||||||||||| |||||||||||    
T  37850681 gtttatgggttctcttacttataaggtgttcaacctctactgttttatgcgatgtgggacatataactcacacttgcacacaa 37850763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 1187440 - 1187528
Alignment:
Q  47 aatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaat 135  Q
    |||||||||||| ||| ||| |||||||| ||||| |||||  |||||| ||| ||||||||  ||||||| |||| ||||||||||||    
T  1187440 aatgagtttatgggtcttctcacttataaaatgtttaacctccacttttatattcgatgtgagacatataattcacacttgcacacaat 1187528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 103
Target Start/End: Complemental strand, 5575173 - 5575130
Alignment:
Q  60 gtcctcttacttataagatgttcaacctttacttttctatccga 103  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||    
T  5575173 gtcctcttacttataaggtgttcaacctttactcttctatccga 5575130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 26661954 - 26662061
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||  ||||||| ||| ||| ||||||||| ||||||||||||||| || |||| ||| ||    ||||||||||| |||    
T  26661954 cttacccaaaaccttaaggcaatcggtttatgggtcttctcacttataaggtgttcaacctttactcttttatctgatatgggatatataactcacactt 26662053  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  26662054 gtacacaa 26662061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 134
Target Start/End: Complemental strand, 4878876 - 4878798
Alignment:
Q  56 atgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    |||||| |||| |||||||| |||||||| ||| ||| || ||||||||||| | ||||||||||||  ||||||||||    
T  4878876 atgtgttctctcacttataaaatgttcaagcttcactattttatccgatgtggaacatataactcacaattgcacacaa 4878798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 9956011 - 9955942
Alignment:
Q  27 cttacccaaaactttagggcaatgagttta-tgtgtcctcttacttataagatgttcaacctttactttt 95  Q
    |||||||||||| ||| ||||||  ||||| || ||||||||||||||||  ||||||||||||||||||    
T  9956011 cttacccaaaaccttaaggcaattggtttaatgggtcctcttacttataatgtgttcaacctttactttt 9955942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 34649545 - 34649440
Alignment:
Q  22 tcacacttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactca 121  Q
    |||| |||||||||||| ||| |||| |  ||||||| || ||   ||||||||| ||||||||||||||| || |||||||||||   |||||||||||    
T  34649545 tcactcttacccaaaaccttaaggcattaggtttatgggttcttgcacttataaggtgttcaacctttactcttttatccgatgtgggacatataactca 34649446  T
Q  122 cccttg 127  Q
    | ||||    
T  34649445 cacttg 34649440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 38804411 - 38804491
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    |||||||||||| ||| ||  ||| |||||||  |||||||||||||||  ||||||||||||||| || ||| |||||||    
T  38804411 cttacccaaaaccttaaggttatgggtttatggatcctcttacttataatgtgttcaacctttactcttttattcgatgtg 38804491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 22793360 - 22793273
Alignment:
Q  47 aatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    |||| |||||||  |||||| ||||||||  | |||||||| ||||||||||| |||||||   |||||||||||| ||||| |||||    
T  22793360 aatgggtttatggatcctctcacttataaagttttcaacctctacttttctatacgatgtgggacatataactcacacttgctcacaa 22793273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 44043828 - 44043893
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 92  Q
    |||||||||||  ||| | ||||| ||||||| ||| ||||||||||||| |||||||| ||||||    
T  44043828 cttacccaaaatcttaagacaatgggtttatgggtcatcttacttataaggtgttcaacatttact 44043893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 24448360 - 24448272
Alignment:
Q  46 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||||||||| | ||||| |||||||| ||||||||| |  |||||||| |  |||||  | ||||||||| || |||||||||||    
T  24448360 caatgagtttatgagccctctcacttataaaatgttcaacttccacttttctttgagatgtctaacatataacttacacttgcacacaa 24448272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 7e-40; HSPs: 67)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 3244505 - 3244612
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||    
T  3244505 cttacccaaaactttaagacaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtgagacatataactcacactt 3244604  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  3244605 gcacacaa 3244612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 25483438 - 25483331
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| |||||||  |||||||||||||||||||||||||||||||| || ||||||||||||  |||||||||||| |||    
T  25483438 cttacccaaaaccttaaggcaatgggtttatggatcctcttacttataagatgttcaacctttactattttatccgatgtgagacatataactcacactt 25483339  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  25483338 gcacacaa 25483331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 36629339 - 36629232
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||||||| |||| ||| |||||||||||||||||||||   |||||||||||| |||    
T  36629339 cttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgtttaacttttacttttctatccgatgtgggacatataactcacactt 36629240  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  36629239 gaacacaa 36629232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 4955371 - 4955478
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||| ||| || |||||||| |||  |||||||||||| |||    
T  4955371 cttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaaccttaactattttatccgatatgagacatataactcacactt 4955470  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  4955471 gcacacaa 4955478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 10246021 - 10245915
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| |||  || ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||  ||||||||||||| |||    
T  10246021 cttacccaaaaccttaaggctttgggtttatg-gtcctcttacttataaggtgttcaacctttactcttttatccgatgtggggcatataactcacactt 10245923  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  10245922 gcacacaa 10245915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 32941177 - 32941284
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||||||||||| | ||||||| ||||||| ||||||||||||||| |||| |||||||| |  |||||||||||| |||    
T  32941177 cttacccaaaaccttaaggcaatgagtttatgagccctcttatttataaggtgttcaacctttactgttctttccgatgtaagacatataactcacactt 32941276  T
Q  127 gcacacaa 134  Q
    ||| ||||    
T  32941277 gcagacaa 32941284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 34646703 - 34646810
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||||||||||| ||||||||| ||||||| |||||||| |||||| || |||||||||||   |||||||||||| |||    
T  34646703 cttacccaaaaccttaaggcaatgagtttatgagtcctcttagttataaggtgttcaacatttactgttttatccgatgtgggacatataactcacactt 34646802  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  34646803 gtacacaa 34646810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 52884985 - 52884882
Alignment:
Q  31 cccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcac 130  Q
    |||||||| ||| ||||||| |||||||  |||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| |||||||    
T  52884985 cccaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcac 52884886  T
Q  131 acaa 134  Q
    ||||    
T  52884885 acaa 52884882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 54741260 - 54741339
Alignment:
Q  55 tatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||| |||| |||||||||||    
T  54741260 tatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataattcacacttgcacacaa 54741339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 55933178 - 55933280
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||| ||||| || ||||||||||    |||||||||||| |||    
T  55933178 cttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacccttactattttatccgatgtaggacatataactcacactt 55933277  T
Q  127 gca 129  Q
    |||    
T  55933278 gca 55933280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 16889590 - 16889691
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||||||| |||| |  |||||||  |||||||||||||||| | ||||||||||||||||||||||||| |||  |||||||||||| |||    
T  16889590 cttacccaaaactttaaggcagtaggtttatgaatcctcttacttataaggtattcaacctttacttttctatccgatttgagacatataactcacactt 16889689  T
Q  127 gc 128  Q
    ||    
T  16889690 gc 16889691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 54017649 - 54017754
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||| ||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| || |||| || |||   |||||||||||| |||    
T  54017649 cttacctaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatctgacgtgggacatataactcacactt 54017748  T
Q  127 gcacac 132  Q
    ||||||    
T  54017749 gcacac 54017754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 44621104 - 44621024
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    |||||||||||| ||| | ||||||||||||||| ||||||||||||||| ||||||||||||||| || |||||||||||    
T  44621104 cttacccaaaaccttaagacaatgagtttatgtgccctcttacttataaggtgttcaacctttactgttttatccgatgtg 44621024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 1731701 - 1731808
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||  ||||||| ||||||||| ||||||||||||||||||||||| || |||| ||||||   ||||||||||||  ||    
T  1731701 cttacccaaaaccttaaggcaattggtttatgggtcctcttatttataagatgttcaacctttactgttttatctgatgtgggacatataactcacattt 1731800  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  1731801 gcacacaa 1731808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 39792914 - 39793021
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||||||||| |  ||||||| |||||||| |||||||| |||||||||||||| ||||||   |||||||||||| |||    
T  39792914 cttacccaaaaccttaaggcaatgagtttacggttcctctttcttataaggtgttcaacatttacttttctatctgatgtgggacatataactcacactt 39793013  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  39793014 gtacacaa 39793021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 60 - 134
Target Start/End: Complemental strand, 2740769 - 2740695
Alignment:
Q  60 gtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||   |||||||||||| |||||||||||    
T  2740769 gtcctcttacttataaggtgttcaacctttactgttctatccgatgtgggacatataactcacacttgcacacaa 2740695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 41370459 - 41370357
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||||||| | |||||| |||||| || |||||||| ||   |||||||||||| |||    
T  41370459 cttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggttttcaacatttactattttatccgatttgggacatataactcacactt 41370360  T
Q  127 gca 129  Q
    |||    
T  41370359 gca 41370357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 50630809 - 50630911
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||  ||||||||||||||| || ||||||||||    |||||||||||| |||    
T  50630809 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataatgtgttcaacctttactattttatccgatgtaggacatataactcacgctt 50630908  T
Q  127 gca 129  Q
    |||    
T  50630909 gca 50630911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 16888870 - 16888971
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    ||||||||||||  || | ||||||||||||  || |||||||||||||| | ||||||||||||||||||||||||||||   |||||||||||| |||    
T  16888870 cttacccaaaaccgtaagacaatgagtttataggttctcttacttataaggtattcaacctttacttttctatccgatgtgggacatataactcacactt 16888969  T
Q  127 gc 128  Q
    ||    
T  16888970 gc 16888971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 2741173 - 2741069
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| |||||||   ||||| ||||||||||||||||| | ||||||||||||| ||||||| ||||||   |||||||||||| |||    
T  2741173 cttacccaaaaccttaaggcaatggagttatgggtcctcttacttataaggtattcaacctttactattctatctgatgtgggacatataactcacactt 2741074  T
Q  127 gcaca 131  Q
    |||||    
T  2741073 gcaca 2741069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 23556920 - 23557024
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||| ||||||||||| |||||||| ||||||  | |||||| |||||| |||||||||||  ||||||||||||||||| || ||| |||||||| |||    
T  23556920 cttatccaaaactttaaggcaatgattttatggattctcttatttataaaatgttcaacctccacttttctatccgatgtaaaacatttaactcacactt 23557019  T
Q  127 gcaca 131  Q
    |||||    
T  23557020 gcaca 23557024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 43174609 - 43174501
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact-tttctatccgatgtgaagcatataactcaccct 125  Q
    ||||||||| |||||| ||  ||  ||||||||||||||||||||||||| ||||||||||||||| ||| |||| ||||||  ||||||||||||| ||    
T  43174609 cttacccaacactttaaggtcataggtttatgtgtcctcttacttataaggtgttcaacctttactctttttatctgatgtgtggcatataactcacact 43174510  T
Q  126 tgcacacaa 134  Q
    || ||||||    
T  43174509 tgtacacaa 43174501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 54109014 - 54108935
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    |||||||||||||| ||| ||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  54109014 cttacccaaaacttaagg-caatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtg 54108935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 22028015 - 22028122
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||  ||||||| ||||||||||||||||| ||||||||||||  | || |||||||||||   ||||||| |||| |||    
T  22028015 cttacccaaaaccttaaggcaatatgtttatgggtcctcttacttataaggtgttcaacctttcgtattttatccgatgtgggacatataagtcacactt 22028114  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  22028115 gcacacaa 22028122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 134
Target Start/End: Original strand, 49076510 - 49076609
Alignment:
Q  35 aaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    |||||||| | ||||| ||||||  ||||||||||||||||| ||||||||||||||| || |||||||| ||   |||||||||||| |||||||||||    
T  49076510 aaactttaagacaatgggtttataggtcctcttacttataaggtgttcaacctttactgttttatccgatatggtacatataactcacacttgcacacaa 49076609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 49303008 - 49302902
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttactt--ataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccc 124  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||  |||||||||||||||||||||||| |||  ||||||   |||||||||||| |    
T  49303008 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttttataagatgttcaacctttacttttttatttgatgtgggacatataactcacac 49302909  T
Q  125 ttgcaca 131  Q
    || ||||    
T  49302908 ttacaca 49302902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 50002528 - 50002421
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| | |||||  |||||| ||||||||||||| ||  ||||||||||||||| || ||||||||||||  |||||||||||| |||    
T  50002528 cttacccaaaaccttaagacaatggatttatgggtcctcttacttaaaaagtgttcaacctttactcttttatccgatgtgagacatataactcacactt 50002429  T
Q  127 gcacacaa 134  Q
    ||| ||||    
T  50002428 gcaaacaa 50002421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 50459803 - 50459728
Alignment:
Q  47 aatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||| || || |||||||| | ||||||||||||    
T  50459803 aatgggtttatgagtcctcttacttataagatgttcaacctttactcttttaaccgatgtggaacatataactcac 50459728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 52884793 - 52884690
Alignment:
Q  31 cccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcac 130  Q
    |||||||| ||| ||||||| ||||||   || ||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| |||||||    
T  52884793 cccaaaaccttaaggcaatgggtttatcgatcatcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcac 52884694  T
Q  131 acaa 134  Q
    ||||    
T  52884693 acaa 52884690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 47 - 137
Target Start/End: Original strand, 34004658 - 34004747
Alignment:
Q  47 aatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaatag 137  Q
    |||||||||||| ||||||||||||||||| ||||||||||||| |||| ||||  |||||   |||||||||||| ||||||||||||||    
T  34004658 aatgagtttatgggtcctcttacttataagttgttcaacctttagtttt-tatcatatgtgtgacatataactcacacttgcacacaatag 34004747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 49880262 - 49880160
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| |||| || ||||||| ||||||||||||||||| ||||||||||||||| || ||| | |||||   |||||||||||| |||    
T  49880262 cttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgttcaacctttactattttattcaatgtgggacatataactcacactt 49880163  T
Q  127 gca 129  Q
    |||    
T  49880162 gca 49880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 120
Target Start/End: Complemental strand, 44620455 - 44620362
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactc 120  Q
    |||||||||||| ||| ||||||| ||||||| |  |||||| ||||||| ||||||||||||||| || ||||||||||| | ||||||||||    
T  44620455 cttacccaaaaccttaaggcaatgggtttatgggctctcttatttataaggtgttcaacctttactgttttatccgatgtggaacatataactc 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 45496907 - 45496827
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    |||||||||||| ||| | ||||||||||||  ||||||||||||||||| ||||||||||||||  || |||||||||||    
T  45496907 cttacccaaaaccttaagacaatgagtttataggtcctcttacttataaggtgttcaacctttacgattttatccgatgtg 45496827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 54936298 - 54936218
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||| ||| ||||||||||||||| || |||| ||||||    
T  54936298 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtg 54936218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 3340909 - 3340802
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| |||| || ||||||| ||||||||||||||||| || |||||||||||| ||  ||| |||| |   |||||||||||| |||    
T  3340909 cttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgctcaacctttactctttcatctgatgcgggacatataactcacactt 3340810  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  3340809 gcacacaa 3340802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 22183318 - 22183425
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||| ||||||| ||| ||||||| ||||||| ||||| ||||||||||  |||||||| |||||| || |||||||||||    ||||||||||| |||    
T  22183318 cttatccaaaaccttaaggcaatgggtttatgggtccttttacttataaattgttcaacatttactcttttatccgatgtgggatatataactcacactt 22183417  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  22183418 gcacacaa 22183425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 134
Target Start/End: Complemental strand, 10246424 - 10246342
Alignment:
Q  52 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||| ||||||| ||||||||||||||||||||||||| || |||||||| |||  ||||||||  || |||||||||||    
T  10246424 gtttatgggtcctctaacttataagatgttcaacctttactcttttatccgatttgagacatataacagacacttgcacacaa 10246342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 41707523 - 41707625
Alignment:
Q  32 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 131  Q
    ||||||| ||| | ||||||||||||| || || ||||||||| | ||||||||||||||| || |||||||||||   |||||||||||| |||| |||    
T  41707523 ccaaaaccttaagacaatgagtttatgggttcttttacttatatggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtaca 41707622  T
Q  132 caa 134  Q
    |||    
T  41707623 caa 41707625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 6975536 - 6975605
Alignment:
Q  53 tttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||| ||||||||||||||||||| ||||||||||||| || |||| |||||||  ||||||||||||    
T  6975536 tttatgagtcctcttacttataagatattcaacctttactattttatcggatgtgagacatataactcac 6975605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 22028423 - 22028491
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttactttt 95  Q
    |||||||||||| ||| | ||||||||||||| ||||||||||| ||||| ||||||||||||| ||||    
T  22028423 cttacccaaaacattaagacaatgagtttatgggtcctcttactaataaggtgttcaacctttattttt 22028491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 134
Target Start/End: Complemental strand, 36572118 - 36572014
Alignment:
Q  30 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 129  Q
    ||||||||| ||| |||||||  |||||| ||| ||||||||||||| |||||||| |||||| || ||| |||||||   |||||||||||| |||| |    
T  36572118 acccaaaaccttaaggcaatggatttatgggtcttcttacttataaggtgttcaacatttactcttttattcgatgtgggacatataactcacacttgta 36572019  T
Q  130 cacaa 134  Q
    |||||    
T  36572018 cacaa 36572014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 18932803 - 18932882
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 106  Q
    |||||| ||||| ||| ||||||| ||||||| ||||||||| ||||||| | ||||||||||||| || ||||||||||    
T  18932803 cttacctaaaaccttaaggcaatgggtttatgggtcctcttatttataaggtattcaacctttactattttatccgatgt 18932882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 20825938 - 20825843
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||||||||| ||| ||| |   ||||||| || |||||| ||||||| ||||||||||||||| || ||||||||||| | ||||||||||||    
T  20825938 cttacccaaaaccttaaggctaaaggtttatgggtgctcttatttataaggtgttcaacctttactcttttatccgatgtggaacatataactcac 20825843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 36608715 - 36608822
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| | |||||  ||||||  ||||||||||||| || |||||||| |||||| || ||||||||||    |||||||||||| |||    
T  36608715 cttacccaaaaccttaagacaatggatttatggatcctcttacttatgaggtgttcaacttttactcttttatccgatgttggacatataactcacactt 36608814  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  36608815 gcacacaa 36608822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 39404120 - 39404013
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| |||  || ||||||||||| ||||||||||||||||  ||||||||||||||| || ||| | ||||    |||||||||||| |||    
T  39404120 cttacccaaaaccttaatgctatgagtttatgagtcctcttacttataaagtgttcaacctttactcttttattcaatgtaggacatataactcacactt 39404021  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  39404020 gtacacaa 39404013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 39404496 - 39404393
Alignment:
Q  31 cccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcac 130  Q
    |||||||| ||| ||| ||  ||||||| ||||||||||||||||| ||||| ||||||||| || |||| ||||||   |||||||||||| |||| ||    
T  39404496 cccaaaaccttaaggctataggtttatgggtcctcttacttataaggtgttccacctttactcttttatctgatgtgggacatataactcacacttgtac 39404397  T
Q  131 acaa 134  Q
    ||||    
T  39404396 acaa 39404393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 44620761 - 44620655
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||  ||| ||||||| ||||||||||||||||  |||||||||| |||| ||  ||||||||||   |||||||||||| |||    
T  44620761 cttacccaaaaccttaaggttatg-gtttatgggtcctcttacttataaagtgttcaacctctactatttcatccgatgtgggacatataactcacactt 44620663  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  44620662 gcacacaa 44620655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 51768115 - 51768221
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||||||||| ||| | ||||||||||||| ||||||||| ||||||| |||||||| |||||| || ||| |||| |    ||||||||||||  |||    
T  51768115 ttacccaaaaccttaagacaatgagtttatgagtcctcttatttataaggtgttcaacatttactcttatattcgatataggacatataactcacatttg 51768214  T
Q  128 cacacaa 134  Q
    |||||||    
T  51768215 cacacaa 51768221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 31691254 - 31691205
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataag 76  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  31691254 cttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataag 31691205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 3341203 - 3341123
Alignment:
Q  54 ttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||| ||||||||||||||||  |||| |||||||||| || ||||| |||||   |||||||||||| |||||||||||    
T  3341203 ttatgggtcctcttacttataaagtgtttaacctttactcttttatccaatgtgggacatataactcacacttgcacacaa 3341123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 54017784 - 54017836
Alignment:
Q  55 tatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    |||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  54017784 tatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtg 54017836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 28034331 - 28034224
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||| ||||| |||  ||||| |||||||| || |||| ||||||||  ||||||||||  |||||||||||||||| |   ||||||| |||| |||    
T  28034331 cttacctaaaaccttaaagcaataagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgcgggacatataattcacactt 28034232  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  28034231 gcacacaa 28034224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 134
Target Start/End: Original strand, 45489421 - 45489492
Alignment:
Q  63 ctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    |||||||||||| | ||||||||||||||| || ||||||||||||  ||||||| |||| |||| ||||||    
T  45489421 ctcttacttatatggtgttcaacctttactcttttatccgatgtgagacatataattcacacttgtacacaa 45489492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 54343088 - 54343135
Alignment:
Q  60 gtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  54343088 gtcctcttacttataaggtgttcaacctttactattttatccgatgtg 54343135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 134
Target Start/End: Complemental strand, 3700434 - 3700360
Alignment:
Q  60 gtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||| ||||||||||| |||||||| |||||| || ||||||||||    |||||||||||| |||||||||||    
T  3700434 gtccttttacttataaggtgttcaacatttactcttttatccgatgtaggacatataactcacacttgcacacaa 3700360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 4390189 - 4390262
Alignment:
Q  61 tcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    |||||||||||||||| ||||||||||||||| || |||| ||||||    || |||||||| |||||||||||    
T  4390189 tcctcttacttataaggtgttcaacctttactcttttatctgatgtgggatatgtaactcacacttgcacacaa 4390262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 23817735 - 23817783
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataa 75  Q
    |||||||||||| ||| |||||||||||||||  |||||||||||||||    
T  23817735 cttacccaaaaccttaaggcaatgagtttatgaatcctcttacttataa 23817783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 134
Target Start/End: Original strand, 49076888 - 49076991
Alignment:
Q  30 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 129  Q
    ||||||||| ||| ||  ||| ||||||| || |||||||| ||||| ||||||||||||||| || || || || || | |||||||||||| ||||||    
T  49076888 acccaaaaccttaaggttatgggtttatgggttctcttact-ataaggtgttcaacctttactattttagccaatatggaacatataactcacacttgca 49076986  T
Q  130 cacaa 134  Q
    |||||    
T  49076987 cacaa 49076991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 20826319 - 20826224
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||| ||||  ||| ||| ||| ||||||| || |||||||||||||  |||||||| |||||| || |||||||||||   ||||||||||||    
T  20826319 cttacctaaaatgttaaggctatgggtttatgggttctcttacttataacgtgttcaacttttactattttatccgatgtgggacatataactcac 20826224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 104
Target Start/End: Original strand, 39699034 - 39699077
Alignment:
Q  61 tcctcttacttataagatgttcaacctttacttttctatccgat 104  Q
    |||||||||||| || ||||||||||||||||||| ||||||||    
T  39699034 tcctcttacttagaatatgttcaacctttacttttatatccgat 39699077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 134
Target Start/End: Complemental strand, 44621492 - 44621421
Alignment:
Q  63 ctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    |||||||||||||| |||| |||||||||| || ||||| ||||    |||||||||||| |||||||||||    
T  44621492 ctcttacttataaggtgtttaacctttactgttttatcccatgttggacatataactcacacttgcacacaa 44621421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 54108639 - 54108564
Alignment:
Q  27 cttacccaaaactttagggcaatgagttt-atgtgtcctcttacttataagatgttcaacctttacttttctatcc 101  Q
    |||| ||||||| ||| |||||||| ||| ||| ||||| ||||||||||| ||||||||||||||| || |||||    
T  54108639 cttagccaaaaccttaaggcaatgaattttatgggtccttttacttataaggtgttcaacctttactattttatcc 54108564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 760274 - 760196
Alignment:
Q  44 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    ||||||||||||||| ||||||| ||||||||  |  |||||||| | |||||||| |||||||   ||||||||||||    
T  760274 ggcaatgagtttatgggtcctctcacttataaagttctcaaccttcatttttctattcgatgtgggacatataactcac 760196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 3271889 - 3271805
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttactt---ataagatgttcaacctttacttttctatccgatgtga 108  Q
    |||||||||||| ||| ||||||  ||||||| || |||||||||   ||||| |||| ||| |||||||||||||| |||||||    
T  3271889 cttacccaaaaccttaaggcaataggtttatgggttctcttacttataataaggtgtttaacttttacttttctatctgatgtga 3271805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 34544201 - 34544127
Alignment:
Q  34 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 108  Q
    ||||| ||| ||||||||||||||| ||||||| | ||||||  || |||||||  |||||||||| ||||||||    
T  34544201 aaaaccttaaggcaatgagtttatgggtcctctcatttataaagtgatcaacctccacttttctattcgatgtga 34544127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 44620362 - 44620304
Alignment:
Q  63 ctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactca 121  Q
    |||||||||||||| ||||||||||||||| || ||||| |||||   |||||||||||    
T  44620362 ctcttacttataaggtgttcaacctttactattttatcccatgtgggacatataactca 44620304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 15841422 - 15841503
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 108  Q
    |||||||||||| ||| ||||||| |||||||  |||||| ||||| ||  ||||||||||  ||||||||||  |||||||    
T  15841422 cttacccaaaaccttaaggcaatgtgtttatgaatcctctcacttacaaagtgttcaacctccacttttctatttgatgtga 15841503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 28254293 - 28254400
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||| ||     
T  28254293 cttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtgggacatataagtcacactg 28254392  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  28254393 gcacacaa 28254400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 15880365 - 15880258
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||||||||||| | |||||||||||| |||    
T  15880365 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtggaacatataactcacactt 15880266  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  15880265 gtacacaa 15880258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 28531370 - 28531477
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||  ||| ||||||||||||||| | ||||||||||||||| |||||||||||| |||||||||||||||||   |||||||||||| |||    
T  28531370 cttacccaaaatcttaaggcaatgagtttatgggacctcttacttataaggtgttcaacctttgcttttctatccgatgtgggacatataactcacactt 28531469  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  28531470 gcacacaa 28531477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 962700 - 962593
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| | ||||| ||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||   |||||||||||| |||    
T  962700 cttacccaaaaccttaagacaatgggtttatgggtcctctcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactcacactt 962601  T
Q  127 gcacacaa 134  Q
    ||| ||||    
T  962600 gcatacaa 962593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 36178661 - 36178763
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| |||    
T  36178661 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacactt 36178760  T
Q  127 gca 129  Q
    |||    
T  36178761 gca 36178763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 6421487 - 6421387
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| | | ||||||||||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| |||    
T  6421487 cttacccaaaacctcaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacactt 6421388  T
Q  127 g 127  Q
    |    
T  6421387 g 6421387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 14745723 - 14745825
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||||| |||||   |||||||||||| |||    
T  14745723 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataactcacactt 14745822  T
Q  127 gca 129  Q
    |||    
T  14745823 gca 14745825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 31899499 - 31899589
Alignment:
Q  44 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||||||||||| ||||||||||||||||| |||||||| |||||| || ||||||||||| | |||||||||||| ||| |||||||    
T  31899499 ggcaatgagtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactcacactttcacacaa 31899589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 36005937 - 36006042
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||||||||| ||| ||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||| |||||||   |||||||||||| ||||    
T  36005937 ttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacttttac-tttctattcgatgtgggacatataactcacacttg 36006035  T
Q  128 cacacaa 134  Q
     ||||||    
T  36006036 tacacaa 36006042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 37106290 - 37106188
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| || |||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| |||    
T  37106290 cttacccaaaaccttaaggaaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacactt 37106191  T
Q  127 gca 129  Q
    |||    
T  37106190 gca 37106188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 41283531 - 41283633
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||| ||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| || |||||||| ||   |||||||||||| |||    
T  41283531 cttacctaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatatgggacatataactcacactt 41283630  T
Q  127 gca 129  Q
    |||    
T  41283631 gca 41283633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 7598330 - 7598225
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||| ||||||||||| ||||||||| ||||||| |||| ||||||||||||||||| ||||||  | ||||||| |||| |||    
T  7598330 cttacccaaaaccttaaggctatgagtttatgggtcctcttatttataaggtgttgaacctttacttttctattcgatgtagaacatataattcacactt 7598231  T
Q  127 gcacac 132  Q
    ||||||    
T  7598230 gcacac 7598225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 28254168 - 28254249
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 108  Q
    ||||||| |||||||| ||||| | ||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  28254168 cttaccctaaactttaaggcaaagtgtttatgagtcctcttacttataaagtgttcaacctttacttttctatccgatgtga 28254249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 30313279 - 30313173
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||  ||| |||||||||||| || ||||||| ||||||||| ||||||||||  |||||||||||||||||||  |||||||| ||| |||    
T  30313279 cttacccaaaatcttaaggcaatgagtttttgggtcctctcacttataag-tgttcaacctccacttttctatccgatgtgagacatataacacacgctt 30313181  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  30313180 gcacacaa 30313173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 33561507 - 33561614
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| | ||||||||||||| ||||||| ||||||||  |||| |||||  ||||||||||| |||||| | |||||||||||| |||    
T  33561507 cttacccaaaaccttaagacaatgagtttatgggtcctctcacttataaagtgtttaacctccacttttctatctgatgtggaacatataactcacactt 33561606  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  33561607 gcacacaa 33561614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 42514751 - 42514644
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||  ||| ||| ||| ||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||    |||||||||||| |||    
T  42514751 cttacccaaaatcttaaggcgatgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatctgatgtaggacatataactcacactt 42514652  T
Q  127 gcacacaa 134  Q
    ||| ||||    
T  42514651 gcatacaa 42514644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 31468806 - 31468909
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||||||||||| |||||||||    |||||| ||||||||||||| || |||||||||||   |||||||||||| |||    
T  31468806 cttacccaaaaccttaaggcaatgagtttatgggtcctctta----taagatattcaacctttactattttatccgatgtgggacatataactcacactt 31468901  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  31468902 gcacacaa 31468909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 37106026 - 37105924
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||  ||| ||||||||||||||| |||| |||||||||||| ||||||||||||||| || ||| |||||||   |||||||||||| |||    
T  37106026 cttacccaaaatcttaaggcaatgagtttatgggtccccttacttataaggtgttcaacctttactattttattcgatgtgggacatataactcacactt 37105927  T
Q  127 gca 129  Q
    |||    
T  37105926 gca 37105924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 48 - 132
Target Start/End: Complemental strand, 1769973 - 1769889
Alignment:
Q  48 atgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacac 132  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||| || |||||||||||   |||||||||||| |||||||||    
T  1769973 atgagtttatgagtcctcttacttataaggtgttcaacttttactcttttatccgatgtgtgacatataactcacacttgcacac 1769889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 16542551 - 16542444
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    ||||| |||||  ||| ||||||||||||||  ||||||||| ||||||| ||||||||||||||| || |||||||||||   | |||||||||| |||    
T  16542551 cttactcaaaatcttaaggcaatgagtttataagtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacttataactcacactt 16542452  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  16542451 gcacacaa 16542444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 29873593 - 29873700
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    ||||| |||||| ||| ||||||||||||||| ||||||  |||||||| |||||||||||  ||||||||||| ||||||   ||| |||| |||||||    
T  29873593 cttactcaaaaccttaaggcaatgagtttatgagtcctcccacttataaaatgttcaacctccacttttctatctgatgtgggacatgtaacacaccctt 29873692  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  29873693 gcacacaa 29873700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 35580780 - 35580886
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||||||| ||||||||| |||||||| |||| | || |||||||||||   |||||||||||| |||    
T  35580780 cttacccaaaaccttaaggcaatgggtttatg-gtcctctcacttataaggtgttcaacatttattgttttatccgatgtgggacatataactcacactt 35580878  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  35580879 gcacacaa 35580886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 38796676 - 38796783
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| |||| |  ||||||| ||||||||||||||||| ||||||||||||| | || |||| ||||||   |||||||||||| |||    
T  38796676 cttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacctttattgttttatcagatgtgggacatataactcacactt 38796775  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  38796776 gcacacaa 38796783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 40679685 - 40679792
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||  ||| ||| ||| ||||||| || |||||||||||||| ||||||||| ||||||||||||||||| ||   ||||||||||||  ||    
T  40679685 cttacccaaaatcttaaggcgatgggtttatgggttctcttacttataaggtgttcaacccttacttttctatccgatatgggacatataactcacattt 40679784  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  40679785 gcacacaa 40679792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 7598684 - 7598606
Alignment:
Q  54 ttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacac 132  Q
    ||||| ||||||||||||||||| |||||||||||||||||| |||| ||||||   |||||||||||| |||||||||    
T  7598684 ttatgggtcctcttacttataaggtgttcaacctttacttttttatctgatgtgggacatataactcacacttgcacac 7598606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 40733619 - 40733510
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||||||| ||   |  ||||||| ||||||||||||||||| |||||||| ||||||||| |||| ||||||   |||||||||||| |||    
T  40733619 cttacccaaaactttaaggttgtaggtttatgggtcctcttacttataaggtgttcaacatttacttttttatctgatgtgggacatataactcacactt 40733520  T
Q  127 gcacacaata 136  Q
    | ||||||||    
T  40733519 gtacacaata 40733510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 6713053 - 6712978
Alignment:
Q  52 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||||| ||||||||||||||||| |||||||| |||||| || ||||||||||||  |||||||||||| ||||    
T  6713053 gtttatgggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgagacatataactcacacttg 6712978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 14745350 - 14745445
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||||||||| ||| ||||||| ||||||| |||||| |||||| ||||||||||||| ||||| || ||| |||||||   ||||||||||||    
T  14745350 cttacccaaaaccttaaggcaatgggtttatgggtcctcatacttacaagatgttcaaccattactattttattcgatgtgggacatataactcac 14745445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 33731750 - 33731655
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||||||||| ||| ||||||  |||||||  |||||||||||||||| || |||||||||||| || ||||||||||||   |||||||||||    
T  33731750 cttacccaaaaccttaaggcaataggtttatggatcctcttacttataaggtgctcaacctttactcttttatccgatgtgagatatataactcac 33731655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 37895117 - 37895224
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| |||||||||| || |||||| |||| | |||||| |||| ||||||||||||||||   |||||||||||  ||     
T  37895117 cttacccaaaaccttaaggcaatgggtttatgtgttcttttacttttaaggttttcaacttttatttttctatccgatgtgggacatataactcaaactc 37895216  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  37895217 gcacacaa 37895224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 5542681 - 5542783
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||| ||||| ||| ||||||  ||||||| ||||||||||||||||| ||||||||||||||| || ||| |||| ||   |||||||||||| |||    
T  5542681 cttaccaaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattttattcgatatgggacatataactcacactt 5542780  T
Q  127 gca 129  Q
    |||    
T  5542781 gca 5542783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 5543054 - 5543156
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||  ||| ||||||  |||||||  |||||||||||||||| ||||||||||||||| || |||| ||||||   |||||||||||| |||    
T  5543054 cttacccaaaatcttaaggcaataggtttatggatcctcttacttataaggtgttcaacctttactattttatcggatgtgggacatataactcacactt 5543153  T
Q  127 gca 129  Q
    |||    
T  5543154 gca 5543156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 36178325 - 36178427
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| | ||||| ||||||| |||| |||||||||||| ||||| ||||||||| || ||||||| |||   |||||||||||| |||    
T  36178325 cttacccaaaaccttaagacaatgggtttatgagtccccttacttataaggtgttccacctttactattttatccgaagtgggacatataactcacactt 36178424  T
Q  127 gca 129  Q
    |||    
T  36178425 gca 36178427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 134
Target Start/End: Original strand, 38796307 - 38796381
Alignment:
Q  60 gtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||||||||||||| |||||||| |||||| || |||||||||||   |||||||||||| |||||||||||    
T  38796307 gtcctcttacttataaggtgttcaacatttactgttttatccgatgtgggacatataactcacacttgcacacaa 38796381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 134
Target Start/End: Original strand, 12529091 - 12529191
Alignment:
Q  34 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacaca 133  Q
    ||||||||| ||||||||||||||| ||||||||||||||| | ||||||| ||||||| || |||  |||||    |||||||||||| |||||| |||    
T  12529091 aaaactttaaggcaatgagtttatgagtcctcttacttatacggtgttcaatctttactgttttatttgatgtaggacatataactcacacttgcataca 12529190  T
Q  134 a 134  Q
    |    
T  12529191 a 12529191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 15511551 - 15511656
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||  ||| | ||||| ||||||| ||||||||||||||||  ||||||||||||||| || |||||| ||||   |||||||||||  |||    
T  15511551 cttacccaaaatcttaagacaatgggtttatgggtcctcttacttataacgtgttcaacctttactcttttatccgttgtgtgacatataactca--ctt 15511648  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  15511649 gcacacaa 15511656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 36178227 - 36178307
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    |||||||||||  ||| ||||||| ||||||| || | |||||||||||| ||||||||||||||| || |||||||||||    
T  36178227 cttacccaaaatcttaaggcaatgggtttatgggttcccttacttataaggtgttcaacctttactattttatccgatgtg 36178307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 9231351 - 9231244
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||| ||||||||||| |||  || ||| |||  |||||||| |||||| |||||||||||||||||||||||| ||| |||  |||||||||||  |||    
T  9231351 cttaaccaaaactttaaggcggtgggttgatggatcctcttatttataatatgttcaacctttacttttctatctgatatgagacatataactcatactt 9231252  T
Q  127 gcacacaa 134  Q
     |||||||    
T  9231251 acacacaa 9231244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 37632653 - 37632760
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| |||  |  ||| ||||||| |||||||||||||||| ||||  |||||||||| || ||||||||||    |||||||||||| |||    
T  37632653 cttacccaaaaccttaaagttatgggtttatgggtcctcttacttataaaatgtcaaacctttactattttatccgatgtaggacatataactcacactt 37632752  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  37632753 gcacacaa 37632760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 107
Target Start/End: Original strand, 40163466 - 40163509
Alignment:
Q  64 tcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  40163466 tcttacttataaggtgttcaacctttacttttctatccgatgtg 40163509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 6422212 - 6422132
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    |||||| ||||| ||| ||| ||| ||||||| ||||||||| ||||||  |||||||||||||||||| |||| ||||||    
T  6422212 cttacctaaaaccttaaggctatgggtttatgggtcctcttaattataatgtgttcaacctttacttttttatctgatgtg 6422132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 12910330 - 12910223
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| | |||||| |||||  ||| | | |||||||||  ||||||||| |||||||| |||||||||| | |||||||||||  |||    
T  12910330 cttacccaaaaccttaagacaatgaatttataagtcatttcacttataaggggttcaacctgtacttttccatccgatgtggaacatataactcaaactt 12910231  T
Q  127 gcacacaa 134  Q
     |||||||    
T  12910230 acacacaa 12910223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 30323566 - 30323459
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||||||||||  ||||||| |||| |||  ||||||||||  | ||||||||| ||| ||   |||||||| ||| |||    
T  30323566 cttacccaaaaccttaaggcaatgagtttataggtcctctcacttctaaagtgttcaacctccaattttctatctgatttgggacatataacacacactt 30323467  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  30323466 gcacacaa 30323459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 23346338 - 23346230
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagc--atataactcaccc 124  Q
    |||||| ||||| ||| ||| ||| ||||||| | ||||||| ||||||| |||| ||||||||||||||||| ||||||||  |  ||||||||||| |    
T  23346338 cttaccgaaaaccttaaggctatgggtttatgggccctctta-ttataaggtgtttaacctttacttttctatacgatgtgagacatatataactcacac 23346240  T
Q  125 ttgcacacaa 134  Q
    | ||||||||    
T  23346239 tcgcacacaa 23346230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 134
Target Start/End: Original strand, 36785664 - 36785726
Alignment:
Q  72 ataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||| ||||||||||||||| || |||||||||||   |||||||||||| |||||||||||    
T  36785664 ataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaa 36785726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 29676620 - 29676543
Alignment:
Q  44 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactca 121  Q
    ||||||||||||||| || |||| ||||||||  ||||||| ||||||| || ||||| ||||||  |||||||||||    
T  29676620 ggcaatgagtttatgggttctctcacttataatgtgttcaatctttactcttttatccaatgtgagacatataactca 29676543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 40733984 - 40733876
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||||||| |||  | || ||||| | ||||||||||||||| |||| || ||||||| || ||| |||||||   |||||||||||| |||    
T  40733984 cttacccaaaactttaaggctgt-aggttatgagccctcttacttataaggtgttaaatctttactcttttattcgatgtgggacatataactcacactt 40733886  T
Q  127 gcacacaata 136  Q
    | ||||||||    
T  40733885 gtacacaata 40733876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 37894765 - 37894857
Alignment:
Q  44 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaata 136  Q
    |||||||  |||||| ||| ||||||||||||| | || | ||||||||||||||| | |||||   ||||||||||||  ||||||||||||    
T  37894765 ggcaatggatttatgagtcttcttacttataaggtttttagcctttacttttctattcaatgtgggacatataactcacatttgcacacaata 37894857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 42515078 - 42515038
Alignment:
Q  67 tacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    |||||||||| |||| |||||||||||||||||||||||||    
T  42515078 tacttataaggtgtttaacctttacttttctatccgatgtg 42515038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 33953827 - 33953934
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    ||||||||||| |||| |||||   ||||||| ||||||| |||||||   ||||||||||  ||||||||||| ||||||   | ||||||||||  ||    
T  33953827 cttacccaaaattttaaggcaacaggtttatgggtcctctcacttatatagtgttcaacctccacttttctatctgatgtgggacttataactcacattt 33953926  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  33953927 gcacacaa 33953934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 29874079 - 29874185
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||| ||||||| ||| ||||||| ||||||| ||||||  | ||||||  ||||||||||  ||||||||||| ||||||   |||||||| ||| |||    
T  29874079 cttatccaaaaccttaaggcaatgggtttatgggtcctcccaattataaagtgttcaacctccacttttctatctgatgtgggacatataacacacactt 29874178  T
Q  127 gcacaca 133  Q
    | |||||    
T  29874179 gtacaca 29874185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 31259672 - 31259750
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatg 105  Q
    |||||||||||| ||| ||  ||  ||||||| ||| ||||||||||||| |||| |||||||||| || |||||||||    
T  31259672 cttacccaaaaccttaaggtgataggtttatgggtcatcttacttataaggtgttgaacctttactcttttatccgatg 31259750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 29676971 - 29676898
Alignment:
Q  61 tcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    |||||| || |||||| |||| |||||||||| || |||||||||||   |||||||||||| | |||||||||    
T  29676971 tcctctcacctataaggtgttaaacctttactcttttatccgatgtgggacatataactcacacctgcacacaa 29676898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 10074419 - 10074526
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||   | | |||||||| |||    
T  10074419 cttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgggacctctaactcacactt 10074518  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  10074519 gcacacaa 10074526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 10074048 - 10074154
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||||||||| ||| ||||||| ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||    ||||||||||||||||    
T  10074048 ttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacgtttacttttctatccgatgtgggatatataactcacccttg 10074147  T
Q  128 cacacaa 134  Q
    |||||||    
T  10074148 cacacaa 10074154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 16107780 - 16107673
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||||||  |||||||||||| |||    
T  16107780 cttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtttaacctttacttttttatccgatgtgacacatataactcacactt 16107681  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  16107680 gtacacaa 16107673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 3409361 - 3409259
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| || |||| ||||||   |||||||||||| |||    
T  3409361 cttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacactt 3409262  T
Q  127 gca 129  Q
    |||    
T  3409261 gca 3409259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 35210306 - 35210204
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| |||||||  |||||| ||||||||||||||||| ||||||||||||||| || ||||||||||||  |||||||||||| |||    
T  35210306 cttacccaaaaccttaaggcaatggttttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacactt 35210207  T
Q  127 gca 129  Q
    |||    
T  35210206 gca 35210204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 9062407 - 9062500
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    ||||||||||||| ||  ||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||   ||||||||||||    
T  9062407 ttacccaaaacttaaga-caatgagtttatgagtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcac 9062500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 14748394 - 14748496
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| |||  |||||||||||||| ||||||||| ||||||| ||||||||||||||| || |||||||||||   |||||||||||| |||    
T  14748394 cttacccaaaaccttaacgcaatgagtttatgggtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacatataactcacactt 14748493  T
Q  127 gca 129  Q
    |||    
T  14748494 gca 14748496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 29518605 - 29518503
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| || |||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| |||    
T  29518605 cttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacactt 29518506  T
Q  127 gca 129  Q
    |||    
T  29518505 gca 29518503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 29519022 - 29518920
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| || |||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| |||    
T  29519022 cttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacactt 29518923  T
Q  127 gca 129  Q
    |||    
T  29518922 gca 29518920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 32741281 - 32741179
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| || |||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| |||    
T  32741281 cttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacactt 32741182  T
Q  127 gca 129  Q
    |||    
T  32741181 gca 32741179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 2377856 - 2377756
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || || ||||||||   |||||||||||| |||    
T  2377856 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatataactcacactt 2377757  T
Q  127 g 127  Q
    |    
T  2377756 g 2377756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 2843657 - 2843561
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtg-tcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||||||||| ||| ||||||||||||||| | |||||||||||||||| |||||||| |||| | || ||||||||||||| ||||||||||||    
T  2843657 cttacccaaaaccttaaggcaatgagtttatggggtcctcttacttataaggtgttcaacttttattattttatccgatgtgaaacatataactcac 2843561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 2579928 - 2580035
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| |||  || ||||||| ||||||||||||||||  ||||||||||||||| || |||||||||||   |||||||||||| |||    
T  2579928 cttacccaaaaccttaaggctgtgggtttatgggtcctcttacttataatgtgttcaacctttactcttttatccgatgtgggacatataactcacactt 2580027  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  2580028 gcacacaa 2580035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 32460636 - 32460731
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||| |||||||   ||||||||||||    
T  32460636 cttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatacgatgtgggacatataactcac 32460731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 2378228 - 2378126
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||| ||||| ||| || |||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| |||    
T  2378228 cttacctaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacactt 2378129  T
Q  127 gca 129  Q
    |||    
T  2378128 gca 2378126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 10911662 - 10911600
Alignment:
Q  33 caaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttactttt 95  Q
    |||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  10911662 caaaactttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactttt 10911600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 5958663 - 5958764
Alignment:
Q  31 cccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcac 130  Q
    |||||||||||| | ||||||||||||| || |||||| ||||||| ||||||||||||||| || |||||||||| |  ||||||||||||  ||||||    
T  5958663 cccaaaactttaagacaatgagtttatgagttctcttatttataaggtgttcaacctttactgttttatccgatgtaacacatataactcacaattgcac 5958762  T
Q  131 ac 132  Q
    ||    
T  5958763 ac 5958764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 10073672 - 10073777
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||  ||| | |||||||||||||  |||||||||||||||| |||||||||||||||||||  |||||||||   ||||||||| || |||    
T  10073672 cttacccaaaatcttaagccaatgagtttatggatcctcttacttataaggtgttcaacctttacttttc--tccgatgtgggacatataactaacactt 10073769  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  10073770 gcacacaa 10073777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 593766 - 593868
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||||||||| ||| |||| |  ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||| ||||||| ||||    
T  593766 ttacccaaaaccttaaggcagtcggtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatacaactcacacttg 593865  T
Q  128 cac 130  Q
    |||    
T  593866 cac 593868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 3058328 - 3058226
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| |||||||  ||||| |||||||||| ||||||||||||||| || |||||||||||   ||||||||| || |||    
T  3058328 cttacccaaaaccttaaggcaatgggtttatggatcctcatacttataaggtgttcaacctttactattttatccgatgtgggacatataactaacactt 3058229  T
Q  127 gca 129  Q
    |||    
T  3058228 gca 3058226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 3409762 - 3409660
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||  | | ||||||| ||||||| |||||||||||||||||||||||||| |||||| || |||| ||||||   |||||||||||| |||    
T  3409762 cttacccaaaaaataaaggcaatgggtttatgggtcctcttacttataagatgttcaacttttactattttatctgatgtggtacatataactcacactt 3409663  T
Q  127 gca 129  Q
    |||    
T  3409662 gca 3409660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 16108148 - 16108058
Alignment:
Q  44 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||| ||||||| ||||||||||||||||| |||||||| |||||| || |||| |||||| | |||||||||||| |||| ||||||    
T  16108148 ggcaatgggtttatgggtcctcttacttataaggtgttcaacatttactcttttatctgatgtggaacatataactcacacttgtacacaa 16108058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 1127462 - 1127382
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    |||||||||||| ||| || |||| ||||||| ||||||||||||||||| ||||||||||||||| || || ||||||||    
T  1127462 cttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttacccgatgtg 1127382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 2578499 - 2578605
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||| ||| ||||||| ||||||||||||||||  ||||||||||||||| || |||||| ||||   |||||||||||| |||    
T  2578499 cttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatccg-tgtgggacatataactcacactt 2578597  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  2578598 gtacacaa 2578605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 12092538 - 12092645
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    ||||| |||||| ||| |||||||||||||||  |||||| ||||||||  || |||||||  ||||||||||||||||||   ||| |||| |||||||    
T  12092538 cttactcaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgctcaacctccacttttctatccgatgtgggacatctaacacaccctt 12092637  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  12092638 gcacacaa 12092645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 1846850 - 1846748
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||| ||||||| ||| |||||||  |||||| || |||||||||||||| ||||||||||||||| || ||||||||||||  |||| || |||| |||    
T  1846850 cttatccaaaaccttaaggcaatggatttatgggtgctcttacttataaggtgttcaacctttactattttatccgatgtgagacatagaattcacactt 1846751  T
Q  127 gca 129  Q
    |||    
T  1846750 gca 1846748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 2579549 - 2579643
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    ||||||||||| ||| ||||||||||||||| | ||||||||||||||| | | | |||||||||||| | |||||||||   ||||||||||||    
T  2579549 ttacccaaaaccttaaggcaatgagtttatgggccctcttacttataaggtatccgacctttacttttttgtccgatgtgggacatataactcac 2579643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 26544151 - 26544049
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    ||||| |||||| ||| |||  || ||||||| ||||||||||||||||  ||||||||||||||| || |||||||||||   |||||||||||| |||    
T  26544151 cttactcaaaaccttaaggcggtgggtttatgggtcctcttacttataacgtgttcaacctttactattttatccgatgtgggacatataactcacactt 26544052  T
Q  127 gca 129  Q
    |||    
T  26544051 gca 26544049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 16455009 - 16454929
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    |||||||||||| ||| ||||||  ||||||| ||||| ||||||||||| ||||||||||||||| || |||| ||||||    
T  16455009 cttacccaaaaccttaaggcaataggtttatgggtcctattacttataaggtgttcaacctttactcttttatctgatgtg 16454929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 3415560 - 3415465
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||| ||||| ||| ||||||| ||||||| ||||||||||||||| | ||||||||||||||| || |||  ||||||   ||||||||||||    
T  3415560 cttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttatatggtgttcaacctttactattttatgtgatgtgggacatataactcac 3415465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 8482028 - 8481922
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||  ||| ||||||||||||||| ||| ||| | ||||||  ||||||||||  |||||| |||| |||||| | |||||||||||| |||    
T  8482028 cttacccaaaatcttaaggcaatgagtttatgagtcatctcatttataaagtgttcaacctccacttttatatctgatgtgga-catataactcacactt 8481930  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  8481929 gcacacaa 8481922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 122
Target Start/End: Original strand, 17135144 - 17135220
Alignment:
Q  46 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||||||||||  ||||||| |||||||| | || ||| ||||||| ||||||||||||||  ||||||||||||    
T  17135144 caatgagtttatgaatcctcttgcttataaggtattaaacatttacttctctatccgatgtgagacatataactcac 17135220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 2578891 - 2578997
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| || ||||||||||||  |||||||| ||||||| | |||||| ||||||||| ||||||||| |   ||||||| |||| |||    
T  2578891 cttacccaaaaccttaaggtaatgagtttatggatcctcttatttataaggtattcaacatttactttt-tatccgatgagggacatataaatcacactt 2578989  T
Q  127 gcacacaa 134  Q
    || |||||    
T  2578990 gctcacaa 2578997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 6071234 - 6071127
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||| ||||||  ||| |||||||||||||||  || ||| ||||||||  ||||||||||  |||||||||| | |||||   |||||||||||| |||    
T  6071234 cttatccaaaatcttaaggcaatgagtttatggatcatctcacttataaagtgttcaacctccacttttctattcaatgtgggacatataactcacactt 6071135  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  6071134 gcacacaa 6071127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 16454677 - 16454570
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||| ||||||  ||| ||||||| ||||||| ||||||||||||||||| |||||||| |||| | || |||| ||||||   || ||||||||| |||    
T  16454677 cttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttattcttttatctgatgtgggacacataactcacactt 16454578  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  16454577 gtacacaa 16454570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 107
Target Start/End: Original strand, 5832108 - 5832162
Alignment:
Q  53 tttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    |||||| ||||||||||||||||| ||||||||||||||| || ||||| |||||    
T  5832108 tttatgggtcctcttacttataaggtgttcaacctttactcttttatccaatgtg 5832162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 1950275 - 1950336
Alignment:
Q  61 tcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    ||||||||||| |||| ||||||||||||||| || |||||||||||   ||||||||||||    
T  1950275 tcctcttacttgtaaggtgttcaacctttactcttttatccgatgtgggacatataactcac 1950336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 14789285 - 14789327
Alignment:
Q  52 gtttatgtgtcctcttacttataagatgttcaacctttacttt 94  Q
    ||||||| |||||||||||| |||| |||||||||||||||||    
T  14789285 gtttatgggtcctcttacttgtaaggtgttcaacctttacttt 14789327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 33605705 - 33605649
Alignment:
Q  78 tgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||||||  ||||||||||| |||||||  |||||| ||||| |||||||||||    
T  33605705 tgttcaacctccacttttctatctgatgtgagacatatagctcacacttgcacacaa 33605649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 1e-29; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 34835311 - 34835205
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| || |||| ||||||   ||||||||||||||||    
T  34835311 cttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatcggatgtgggacatataactcaccctt 34835212  T
Q  127 gcacaca 133  Q
    | |||||    
T  34835211 gtacaca 34835205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 33 - 134
Target Start/End: Complemental strand, 41972254 - 41972153
Alignment:
Q  33 caaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacac 132  Q
    |||||||||| ||||||| ||||||| ||||| | ||||||||| ||||||||||||||||||||||||||||||   |||||||||||| |||||||||    
T  41972254 caaaactttatggcaatgggtttatgggtcctatcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcacac 41972155  T
Q  133 aa 134  Q
    ||    
T  41972154 aa 41972153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 27 - 135
Target Start/End: Original strand, 45122113 - 45122221
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| |  |||||||||||| || |||||||||||||| ||||||||||||||| || ||||||||||||  |||||||||||| |||    
T  45122113 cttacccaaaaccttaagaaaatgagtttatgggttctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacactt 45122212  T
Q  127 gcacacaat 135  Q
    |||||||||    
T  45122213 gcacacaat 45122221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 3669789 - 3669687
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| || |||| ||||||   |||||||||||| |||    
T  3669789 cttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacactt 3669690  T
Q  127 gca 129  Q
    |||    
T  3669689 gca 3669687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 139
Target Start/End: Complemental strand, 9608845 - 9608735
Alignment:
Q  29 tacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgc 128  Q
    |||||||||| ||| ||  ||| ||||||| ||| ||||||||||||| ||||||||||||||||||||||||||| ||   |||||||||||| |||||    
T  9608845 tacccaaaaccttaaggtgatgggtttatgggtcatcttacttataaggtgttcaacctttacttttctatccgatatgggacatataactcacacttgc 9608746  T
Q  129 acacaatagaa 139  Q
    |||||| ||||    
T  9608745 acacaacagaa 9608735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 5420746 - 5420673
Alignment:
Q  34 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    ||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5420746 aaaaccttaaggcaatgggtttatgagtcctcttacttataagatgttcaacctttactattctatccgatgtg 5420673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 40518684 - 40518575
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| | || || ||||||| ||||||||| ||||||| ||||||||||||||||||||||| ||||||   |||||||||||| |||    
T  40518684 cttacccaaaaccttaagtcattgggtttatgggtcctcttatttataaggtgttcaacctttacttttctatctgatgtgggacatataactcacactt 40518585  T
Q  127 gcacacaata 136  Q
    | ||||||||    
T  40518584 gaacacaata 40518575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 147553 - 147458
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||||||||||||| ||||||  ||||||| ||||||||| ||||||| ||||||||||||||| || |||||||||||   ||||||||||||    
T  147553 cttacccaaaactttaaggcaataggtttatgggtcctcttatttataaggtgttcaacctttactcttttatccgatgtgggacatataactcac 147458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 3038346 - 3038453
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||||| ||||||||||  ||||||||||||||| || |||||||||||   |||||||||||| |||    
T  3038346 cttacccaaaaccttaaggcaatgggtttatgggtccttttacttataaagtgttcaacctttactattttatccgatgtgggacatataactcacactt 3038445  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  3038446 gtacacaa 3038453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 4154722 - 4154829
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| || |||||||||||||||| ||||| | ||||||||  ||||||||||  ||||||||||| ||||||   |||||||||||| |||    
T  4154722 cttacccaaaaccttggggcaatgagtttatgggtcctttcacttataaagtgttcaacctccacttttctatcagatgtgggacatataactcacactt 4154821  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  4154822 gcacacaa 4154829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 9309457 - 9309350
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    ||||||| | || ||| ||||||||||||| | ||||||||||||||||| |||||||| |||||| || |||||||||||   |||||||||||| |||    
T  9309457 cttacccgacaccttaaggcaatgagtttaagggtcctcttacttataaggtgttcaacatttactcttttatccgatgtgggacatataactcacactt 9309358  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  9309357 gcacacaa 9309350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 30359373 - 30359266
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||| ||| ||||||| |||||||| |||||||| |||||||| |||||| || ||||||||||||  |||||||||||| |||    
T  30359373 cttacccaaaaccttaaggctatgggtttatgggtcctcttgcttataaggtgttcaacatttactcttttatccgatgtgagacatataactcacactt 30359274  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  30359273 gtacacaa 30359266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 33113423 - 33113502
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 106  Q
    |||||||||||  ||| ||||||||||||||| |||||||||||||||||| |||||||||||||| || ||||||||||    
T  33113423 cttacccaaaatcttaaggcaatgagtttatgggtcctcttacttataagacgttcaacctttactattttatccgatgt 33113502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 34834978 - 34834871
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||||||||||| ||| ||||||||||||| |||| |||||||||| || ||||| |||||   |||||||||||| |||    
T  34834978 cttacccaaaaccttaaggcaatgagtttatgagtcatcttacttataaggtgtttaacctttactattttatccaatgtgggacatataactcacactt 34834879  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  34834878 gtacacaa 34834871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 34835577 - 34835470
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatc-cgatgtgaagcatataactcaccct 125  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||| |||| |||||||||| || ||||  || |||   |||||||||||||||    
T  34835577 cttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacctttactattttatcgggacgtgggacatataactcaccct 34835478  T
Q  126 tgcacaca 133  Q
    || |||||    
T  34835477 tgtacaca 34835470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 34835843 - 34835736
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatc-cgatgtgaagcatataactcaccct 125  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||| |||| |||||||||| || ||||  || |||   |||||||||||||||    
T  34835843 cttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacctttactattttatcgggacgtgggacatataactcaccct 34835744  T
Q  126 tgcacaca 133  Q
    || |||||    
T  34835743 tgtacaca 34835736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 45121967 - 45122070
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||||||||  ||| ||||||||||||||| ||||||||||||||||  ||||||||||||||| || ||| |||||||   |||||||||||| ||||    
T  45121967 ttacccaaaatcttaaggcaatgagtttatgagtcctcttacttataaagtgttcaacctttactattttatgcgatgtgggacatataactcacacttg 45122066  T
Q  128 caca 131  Q
    ||||    
T  45122067 caca 45122070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 31 - 127
Target Start/End: Original strand, 25561876 - 25561972
Alignment:
Q  31 cccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    |||||||| ||| | ||||||||||||| ||||||||||||||||| |||||||| |||||| || |||||||||||   |||||||||||| ||||    
T  25561876 cccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacgtttactcttttatccgatgtgggacatataactcacacttg 25561972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 45122724 - 45122648
Alignment:
Q  29 tacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatg 105  Q
    |||||||||| ||| | ||||||||||||| ||||||||||||||||| ||||||||||||||| || |||||||||    
T  45122724 tacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatg 45122648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 70330 - 70425
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||| ||||| ||| |||| || ||||||| |||||||||||||||||||||||||| |||||| || |||||||||||   ||||||||||||    
T  70330 cttacctaaaaccttaaggcagtgggtttatgggtcctcttacttataagatgttcaacatttactcttttatccgatgtgggacatataactcac 70425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 9609187 - 9609108
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 106  Q
    |||||| ||||| ||| ||| ||| ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||    
T  9609187 cttaccgaaaacattaaggcgatgggtttatgggtcatcttacttataagatgttcaacctttacttttctatctgatgt 9609108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 1013927 - 1014029
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    ||||| ||||||| || ||||||| ||||||  ||||||||||||||| | |||||||| |||||| || ||||||||||| | |||||||||||| |||    
T  1013927 cttactcaaaactctaaggcaatgggtttattggtcctcttacttatagggtgttcaacttttactattttatccgatgtggaacatataactcacactt 1014026  T
Q  127 gca 129  Q
    |||    
T  1014027 gca 1014029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 1014301 - 1014403
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||||||| || || ||||||| | ||||||||||||||||| ||||||||||||||| || |||| |||||    |||||||||||| |||    
T  1014301 cttacccaaaactttaaggtaacgagtttacgggtcctcttacttataaggtgttcaacctttactattttatctgatgtatgacatataactcacactt 1014400  T
Q  127 gca 129  Q
    |||    
T  1014401 gca 1014403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 52 - 134
Target Start/End: Complemental strand, 8794188 - 8794106
Alignment:
Q  52 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||| |||||||||||||||||||||||||| |||| | || ||||||||||||  |||||||||||| |||| ||||||    
T  8794188 gtttatgagtcctcttacttataagatgttcaacatttattcttttatccgatgtgagacatataactcacacttgtacacaa 8794106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 9309077 - 9308972
Alignment:
Q  31 cccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaag--catataactcacccttgc 128  Q
    |||||||| ||  ||||||| ||||||| |||||||||||||||| ||||||||| |||||| || |||| |||||| ||  |||||||||||| |||||    
T  9309077 cccaaaacctttaggcaatgggtttatgggtcctcttacttataacatgttcaacttttactcttttatctgatgtgtaggacatataactcacacttgc 9308978  T
Q  129 acacaa 134  Q
    ||||||    
T  9308977 acacaa 9308972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 9482677 - 9482755
Alignment:
Q  44 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||||| ||||| | ||||||||||||    
T  9482677 ggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatcccatgtggaacatataactcac 9482755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 9483243 - 9483320
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgat 104  Q
    |||||||||||| ||| | ||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||||||||    
T  9483243 cttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgat 9483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 6876918 - 6877026
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt-gaagcatataactcaccct 125  Q
    ||||||||||||  || | |||||||| |||| ||| ||||| ||||||| |||||||||||||||||| |||||||||| | |  ||||||||||| ||    
T  6876918 cttacccaaaaccctaagacaatgagtgtatgggtcatcttatttataaggtgttcaacctttacttttttatccgatgtgggactatataactcacact 6877017  T
Q  126 tgcacacaa 134  Q
    |||||||||    
T  6877018 tgcacacaa 6877026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 40579562 - 40579662
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||| ||||| |||  ||||| |||||||| ||||||||||||||||| ||||||||||||||| || ||||| || |||| ||||||| |||| |||    
T  40579562 cttacctaaaaccttaaagcaataagtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatatgaaacatataattcacactt 40579661  T
Q  127 g 127  Q
    |    
T  40579662 g 40579662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 43398124 - 43398222
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctc---ttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||| ||||||||||| |||||||| |||||| ||||||   ||| ||||||| ||||||||||||||||||||||||||| |||   |||||||||||    
T  43398124 cttatccaaaactttaaggcaatgaatttatgggtcctcctcttatttataaggtgttcaacctttacttttctatccgatatgagatatataactcac 43398222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 8918820 - 8918927
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| | ||||  ||||||| ||||||||||||||||  ||||||||||||||| | ||||| ||||||   ||| |||||||| |||    
T  8918820 cttacccaaaaccttaagtcaataggtttatgggtcctcttacttataaagtgttcaacctttactctgctatctgatgtgggacatgtaactcacactt 8918919  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  8918920 gcacacaa 8918927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 30359711 - 30359604
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||  ||| ||  ||| ||||||| ||||||||||||||||| |||||||| |||||| || |||| |||||||  |||||||||||| |||    
T  30359711 cttacccaaaatcttaaggttatgggtttatgagtcctcttacttataaggtgttcaacttttactcttttatctgatgtgagacatataactcacactt 30359612  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  30359611 gtacacaa 30359604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 43274835 - 43274930
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    ||||| |||||| ||| | ||||  ||||||| |||||||||||||||| || ||||||||||||| || |||| |||||||| ||||||||||||    
T  43274835 cttactcaaaaccttaagacaataggtttatgggtcctcttacttataatatattcaacctttactcttttatctgatgtgaaacatataactcac 43274930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 3670162 - 3670060
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| || |||  ||||||| |||||| |||||||||| |||| |||||||||| || |||||||||||   |||||||||||| |||    
T  3670162 cttacccaaaaccttaaggaaataggtttatgggtcctcatacttataaggtgttaaacctttactattttatccgatgtgggacatataactcacactt 3670063  T
Q  127 gca 129  Q
    |||    
T  3670062 gca 3670060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 9620749 - 9620839
Alignment:
Q  44 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||||||||||| ||||||| ||||||||  || ||||| | |||||||||||| | |||||  |||||||||||| |||||||||||    
T  9620749 ggcaatgagtttatgggtcctctcacttataaagtgatcaacttctacttttctatctgttgtgagacatataactcacacttgcacacaa 9620839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 40518173 - 40518064
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttac--ttttctatccgatgtgaagcatataactcaccc 124  Q
    |||||||||||| ||| |||| || ||||||| ||||  ||||||||||| ||||||||||||||  |||| ||||| ||||| | |||||||||||| |    
T  40518173 cttacccaaaaccttaaggcattgggtttatgggtccatttacttataaggtgttcaacctttacttttttttatccaatgtggaacatataactcacac 40518074  T
Q  125 ttgcacacaa 134  Q
    ||| ||||||    
T  40518073 ttgaacacaa 40518064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 18372050 - 18372115
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 92  Q
    |||||||||||| |||  ||||||||||||||  |||||||||||||||| |||||||||||||||    
T  18372050 cttacccaaaaccttaaagcaatgagtttatggatcctcttacttataaggtgttcaacctttact 18372115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 20870629 - 20870718
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatata 116  Q
    |||| ||||||  ||| |||| || ||||||| ||||||||||||||||||||||||||||||||| || |||| |||||| | ||||||    
T  20870629 cttatccaaaatcttaaggcagtgggtttatgggtcctcttacttataagatgttcaacctttactattttatctgatgtggaacatata 20870718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 1513972 - 1514051
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    ||||||||||| ||| ||  ||| ||||| | ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  1513972 ttacccaaaaccttaaggttatgggtttaagggtcctcttacttataaggtgttcaacctttactcttttatccgatgtg 1514051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 134
Target Start/End: Original strand, 4154333 - 4154443
Alignment:
Q  23 cacacttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||||||||||||  ||| ||||||||||||||| || |||| ||||||||  ||||||||||  ||||||||||| |||||    ||||||||||||    
T  4154333 cacacttacccaaaatattaaggcaatgagtttatgggt-ctctcacttataaagtgttcaacctccacttttctatctgatgtaggacatataactcac 4154431  T
Q  123 ccttgcacacaa 134  Q
      ||||||||||    
T  4154432 atttgcacacaa 4154443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 18372349 - 18372416
Alignment:
Q  64 tcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 131  Q
    ||||||||||||| ||||||||||||||| || ||||||||||||  |||||||||||| ||| ||||    
T  18372349 tcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacactttcaca 18372416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 18372788 - 18372859
Alignment:
Q  60 gtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 131  Q
    ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||| ||||    
T  18372788 gtcctcttacttataaggtgttcaacctttactattttatccgatgtgtgacatataactcacactttcaca 18372859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 18373004 - 18373063
Alignment:
Q  44 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccga 103  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||||||| || |||||||    
T  18373004 ggcaatgagtttatgagtcctcttatttataaggtgttcaacctttactattttatccga 18373063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 41416252 - 41416322
Alignment:
Q  52 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||||  |||||||||||||||| ||||||||||||||| || |||||||||||   ||||||||||||    
T  41416252 gtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcac 41416322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 9507884 - 9507819
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 92  Q
    |||||||||||| ||| || |||| ||||||| ||||||||||||||||| | |||||||||||||    
T  9507884 cttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtattcaacctttact 9507819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 30441187 - 30441081
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttactta----taagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||||||||| ||| ||||||| ||||||| | |||||||||||    |||| ||||||||||||||| || || ||||||||   ||||||||||||    
T  30441187 cttacccaaaaccttaaggcaatgggtttatgggccctcttacttataattaaggtgttcaacctttactattttagccgatgtgggacatataactcac 30441088  T
Q  123 ccttgca 129  Q
     ||||||    
T  30441087 acttgca 30441081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 18372676 - 18372734
Alignment:
Q  44 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccga 103  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||    
T  18372676 ggcaatgggtttatgagtcctcttacttataag-tgttcaacctttactattttatccga 18372734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 3037783 - 3037853
Alignment:
Q  46 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatata 116  Q
    ||||| ||||||| ||||||||||||||||| |||||||| |||||| ||  |||||||||| | ||||||    
T  3037783 caatgggtttatgagtcctcttacttataaggtgttcaacatttactatttcatccgatgtggaacatata 3037853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 134
Target Start/End: Complemental strand, 12283953 - 12283868
Alignment:
Q  49 tgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    |||||||||||||| | |||||| |||||| |||||| ||||||||| |||| || |||   ||||||||| || |||||||||||    
T  12283953 tgagtttatgtgtcattttacttttaagatattcaacatttacttttttatctgacgtgggacatataacttacacttgcacacaa 12283868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 107
Target Start/End: Original strand, 25561736 - 25561780
Alignment:
Q  63 ctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    |||||||||||||| ||||||||||||||| || |||||||||||    
T  25561736 ctcttacttataaggtgttcaacctttactcttttatccgatgtg 25561780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 37544546 - 37544626
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    |||||||||||| |||  | ||||  |||||| |||||||| |||||||  ||||||||||||||| || |||||||||||    
T  37544546 cttacccaaaaccttaaagtaatggatttatgggtcctctttcttataatgtgttcaacctttactattttatccgatgtg 37544626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 32640588 - 32640678
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||||||||| ||| ||||||| ||||||  |||||||||| |     |||||||||||||||| || ||||||||||||  || |||||||||    
T  32640588 cttacccaaaaccttaaggcaatgggtttatcggtcctcttacct-----atgttcaacctttactcttttatccgatgtgagacagataactcac 32640678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 45121737 - 45121792
Alignment:
Q  52 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    |||||||  |||||||||||||||| || |||||||||||| || |||||||||||    
T  45121737 gtttatggatcctcttacttataaggtgatcaacctttactcttttatccgatgtg 45121792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 45123106 - 45123002
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| |  |||  ||||||| ||| |||||||||  || |||| |||||||||| || |||||||||||   |||||||||||| |||    
T  45123106 cttacccaaaaccttaagaaaataggtttatgggtcatcttactta--aggtgtttaacctttactattttatccgatgtgggacatataactcacactt 45123009  T
Q  127 gcacaca 133  Q
    |||||||    
T  45123008 gcacaca 45123002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 18371717 - 18371807
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||||||||| ||| |||| || ||||||| ||| |||||||||    |||||||||||||||| || |||||||||||   ||||||||||||    
T  18371717 cttacccaaaaccttaaggca-tgggtttatgggtcttcttactta----atgttcaacctttactattttatccgatgtgtgacatataactcac 18371807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 134
Target Start/End: Complemental strand, 33832047 - 33831973
Alignment:
Q  60 gtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||||||||||||  |||||||| | ||||||||| | | | ||||  |||||||||||| |||||||||||    
T  33832047 gtcctcttacttataaagtgttcaacttctacttttctcttcaacgtgagacatataactcacacttgcacacaa 33831973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 5915969 - 5915928
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctctta 68  Q
    |||||||||||| ||| ||||||||||||||| |||||||||    
T  5915969 cttacccaaaaccttaaggcaatgagtttatgggtcctctta 5915928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 147880 - 147824
Alignment:
Q  78 tgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    |||||||| ||||||||| |||| ||||||   |||||||||||| |||||||||||    
T  147880 tgttcaacatttacttttttatcagatgtgggacatataactcacacttgcacacaa 147824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 20995508 - 20995564
Alignment:
Q  78 tgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||||||  |||||| |||| |||||||  |||||||||||| |||||||||||    
T  20995508 tgttcaacctccacttttttatctgatgtgagacatataactcacacttgcacacaa 20995564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 32305559 - 32305503
Alignment:
Q  47 aatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccga 103  Q
    |||| ||||||  ||| ||||||||||||| ||||||||||||||| || |||||||    
T  32305559 aatgggtttataggtcttcttacttataaggtgttcaacctttactattttatccga 32305503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 21832399 - 21832503
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||   |||||||||||| |||    
T  21832399 cttacccaaaaccttaaggctatgagtttatgagtcctcttacttataaggtgttcaacctttacttttctatccaatgtgggacatataactcacactt 21832498  T
Q  127 gcaca 131  Q
    |||||    
T  21832499 gcaca 21832503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 15773294 - 15773187
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||| |||||| || ||| |||||||   |||||||||||| |||    
T  15773294 cttacccaaaactttaaggcaatgagcttatgagtcctcttacttataagatgttcaacttttactcttttattcgatgtgggacatataactcacactt 15773195  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  15773194 gcacacaa 15773187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 37990695 - 37990802
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||||||| |||||||| |||||| || ||||||||||| | |||||||||||| |||    
T  37990695 cttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactcacactt 37990794  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  37990795 gtacacaa 37990802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 12114618 - 12114725
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| | ||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    |||||||| || |||    
T  12114618 cttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgggatatataacttacactt 12114717  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  12114718 gcacacaa 12114725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 25739481 - 25739588
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| | |  |||||||||||||| ||||||||||||||| |||||||||| |||||| || |||||||||||   |||||||||||| |||    
T  25739481 cttacccaaaacctaaaagcaatgagtttatgggtcctcttacttatatgatgttcaacttttactattttatccgatgtgggacatataactcacactt 25739580  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  25739581 gcacacaa 25739588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 37991033 - 37991140
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||| ||||||||||  ||||||||||||||||| ||||||||||||||| || ||||| ||||||  |||||||||||| |||    
T  37991033 cttacccaaaaccttaaggcgatgagtttataggtcctcttacttataaggtgttcaacctttactattttatccaatgtgagacatataactcacactt 37991132  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  37991133 gtacacaa 37991140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 43346847 - 43346954
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||||||||||| || |||||||||||||| ||||||||||||||| || |||| ||||||   |||||||||||| |||    
T  43346847 cttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacactt 43346946  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  43346947 gtacacaa 43346954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 49336743 - 49336850
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||| ||||||| | | ||| ||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||  ||| |||||||| |||    
T  49336743 cttacccagaactttaagactatgggtttatgggtcctcttacttataaggtggtcaacctttacttttctatccgatgtgagacatgtaactcacactt 49336842  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  49336843 gtacacaa 49336850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 134
Target Start/End: Complemental strand, 35946623 - 35946517
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||||||||| ||| ||||| | ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||    
T  35946623 ttacccaaaaccttaaggcaacgggtttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttg 35946524  T
Q  128 cacacaa 134  Q
     ||||||    
T  35946523 tacacaa 35946517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 33175717 - 33175827
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttat---gtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacc 123  Q
    |||||||||||| ||| ||| ||||||||||   | || |||||||||||||| ||||||||||||||||||||||| |||||||  ||||||||||||     
T  33175717 cttacccaaaaccttaaggctatgagtttattatgggttctcttacttataaggtgttcaacctttacttttctatctgatgtgagacatataactcaca 33175816  T
Q  124 cttgcacacaa 134  Q
    |||| ||||||    
T  33175817 cttgtacacaa 33175827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 51886645 - 51886561
Alignment:
Q  45 gcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 129  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||| || ||| ||||||||  |||||||||||| ||||||    
T  51886645 gcaatgagtttatgggtcctcttacttatatgatgttcaacctttactattttattcgatgtgagacatataactcacacttgca 51886561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 29644637 - 29644744
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| | ||||| ||||||| || |||||||||||||| ||||||||||||||| ||  ||||||||||   |||||||||||| |||    
T  29644637 cttacccaaaaccttaagacaatgggtttatgggttctcttacttataaggtgttcaacctttactctttaatccgatgtgggacatataactcacactt 29644736  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  29644737 gcacacaa 29644744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 29644958 - 29645065
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| | ||||| ||||||| ||||||||||||||||| |||| |||||||||| || |||||||||||   ||||||||| || |||    
T  29644958 cttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgtttaacctttactcttttatccgatgtgggacatataacttacactt 29645057  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  29645058 gcacacaa 29645065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 22304671 - 22304569
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| | ||||||||||||| || |||||||||||   |||||| ||||| |||    
T  22304671 cttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtattcaacctttactattttatccgatgtgggacatatagctcacactt 22304572  T
Q  127 gca 129  Q
    |||    
T  22304571 gca 22304569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 134
Target Start/End: Complemental strand, 25755495 - 25755389
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||||| ||||||||| |||||  |||||| ||||||||||||||||| | ||||||||||||| || |||| |||||||  |||||||||||| ||||    
T  25755495 ttacccacaactttaggacaatggatttatgagtcctcttacttataaggtattcaacctttactcttttatctgatgtgagacatataactcacacttg 25755396  T
Q  128 cacacaa 134  Q
     ||||||    
T  25755395 tacacaa 25755389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 9240225 - 9240144
Alignment:
Q  53 tttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    |||||| ||||||||||||||||| |||||| | ||||||| ||||||||||||| | |||||||||||| |||||||||||    
T  9240225 tttatgggtcctcttacttataaggtgttcagcttttacttctctatccgatgtggaacatataactcacacttgcacacaa 9240144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 15772956 - 15772851
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||| ||||||| |||  |||||||||||||| ||||||||||||||||| |||||||| |||||| || |||||||| ||   |||||||||||| |||    
T  15772956 cttatccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacatttactcttttatccgatatgggacatataactcacactt 15772857  T
Q  127 gcacac 132  Q
    ||||||    
T  15772856 gcacac 15772851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 41359821 - 41359901
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| | ||||||||||||| || |||||||||||    
T  41359821 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactattgtatccgatgtg 41359901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 45901816 - 45901708
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttactt-ttctatccgatgtgaagcatataactcaccct 125  Q
    |||||| ||||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||||  || || |||||||||||   |||||||||||| ||    
T  45901816 cttaccaaaaactttaaggccatgagtttatgcgtcctcttacttataaggtgttcaacctttttttcttttatccgatgtgggacatataactcacact 45901717  T
Q  126 tgcacacaa 134  Q
    || ||||||    
T  45901716 tgtacacaa 45901708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 1634370 - 1634477
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacc-tttacttttctatccgatgtgaagcatataactcaccct 125  Q
    |||||||||||| ||| | ||||| ||||||| ||||||||||||||||  |||| |||| |||| ||||||||||||||||   |||||||||||| ||    
T  1634370 cttacccaaaaccttaagccaatgggtttatgggtcctcttacttataatgtgtttaaccttttatttttctatccgatgtgggacatataactcacact 1634469  T
Q  126 tgcacaca 133  Q
    ||||||||    
T  1634470 tgcacaca 1634477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 8328006 - 8327899
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| |||| |  ||||||| || |||||||||||||||| |||| |||||||| || |||||||||||   |||||||||||| |||    
T  8328006 cttacccaaaaccttaaggcattacgtttatgggttctcttacttataagatattcatcctttactcttttatccgatgtgggacatataactcacactt 8327907  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  8327906 gcacacaa 8327899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 33803308 - 33803415
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    ||||||||| || |||  |||||| ||||||| ||||||||||||||| | ||||||||||||||| || |||||||||||   ||||||||||||  ||    
T  33803308 cttacccaataccttaatgcaatgggtttatgggtcctcttacttatatggtgttcaacctttactattttatccgatgtgggacatataactcacaatt 33803407  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  33803408 gcacacaa 33803415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 39935011 - 39935090
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 106  Q
    ||||| |||||||||| ||||||| |||||||  |||||||||||||||| ||||||||||||||| || ||||||||||    
T  39935011 cttactcaaaactttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactcttttatccgatgt 39935090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 42342146 - 42342253
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||||||||   || ||| |||||| || ||||||||||| | ||||| | |||| |||    
T  42342146 cttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggcattgaacatttactcttttatccgatgtggaacatatgaatcacactt 42342245  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  42342246 gcacacaa 42342253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 42342444 - 42342551
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| | |||||  |||||| ||||||||||||||||| |||| |||||||||| || |||| ||||||   |||||||||||| |||    
T  42342444 cttacccaaaaccttaagacaatggatttatgggtcctcttacttataaggtgttgaacctttactcttttatcggatgtgggacatataactcacactt 42342543  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  42342544 gcacacaa 42342551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 52634777 - 52634671
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||| |||||||||||||  |||||||||||||| || |||||||||||   |||||||||||| |||    
T  52634777 cttacccaaaaccttaaggcaatgggtttatgggtc-tcttacttataaggcgttcaacctttactgttttatccgatgtgggacatataactcacactt 52634679  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  52634678 gtacacaa 52634671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 54017872 - 54017979
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| |||  |  ||||||| ||||||||||||||||| ||||||||||||||| || ||||||||||    |||||||||||| |||    
T  54017872 cttacccaaaaccttaaggcgttaggtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtaggacatataactcacactt 54017971  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  54017972 gcacacaa 54017979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 4823757 - 4823655
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||  ||| ||||||||||||||| |||||| |||||||||| |||| ||| |||||| || ||||||||||||  | |||||||||| |||    
T  4823757 cttacccaaaatcttaaggcaatgagtttatgggtcctcctacttataaggtgtttaacttttactattttatccgatgtgagacttataactcacactt 4823658  T
Q  127 gca 129  Q
    |||    
T  4823657 gca 4823655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 32462956 - 32463064
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacc-tttacttttctatccgatgtgaagcatataactcaccct 125  Q
    ||||| |||||| ||| ||||||| ||||||| ||| ||||||||||||| | ||||||| |||||| ||||||||||||||   |||||||||||| ||    
T  32462956 cttactcaaaaccttaaggcaatgggtttatgagtcttcttacttataaggtattcaaccttttactcttctatccgatgtgggacatataactcacact 32463055  T
Q  126 tgcacacaa 134  Q
    || ||||||    
T  32463056 tgtacacaa 32463064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 32589805 - 32589742
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaaccttta 90  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  32589805 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttta 32589742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 47964971 - 47965078
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||  ||| ||||||| | ||||| | ||||| |||||||  ||||| |||||  ||||||||||||||||| || |||||||||||| |||    
T  47964971 cttacccaaaatcttaaggcaatgggcttatgagccctctcacttatataatgtttaacctccacttttctatccgatgtaaaacatataactcacactt 47965070  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  47965071 gcacacaa 47965078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 53577466 - 53577359
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    ||||||||| || ||| ||||||  |||||||  ||| |||| || |||||||||||||||||||| || |||||||||||   |||||||||||| |||    
T  53577466 cttacccaagaccttaaggcaatatgtttatggatccacttatttttaagatgttcaacctttactgttttatccgatgtgtgacatataactcacactt 53577367  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  53577366 gcacacaa 53577359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 39389172 - 39389070
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| | ||||| ||||||| ||||||||| || |||| ||||||||||||||| || ||||||||||    |||||||||||| |||    
T  39389172 cttacccaaaaccttaagacaatgggtttatgggtcctcttagttttaaggtgttcaacctttactattttatccgatgtaggacatataactcacactt 39389073  T
Q  127 gca 129  Q
    |||    
T  39389072 gca 39389070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 134
Target Start/End: Complemental strand, 39914329 - 39914247
Alignment:
Q  52 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||| ||||||||| ||||||| |||||||||| |||| || |||| |||||||  |||||||||||| |||||||||||    
T  39914329 gtttatgggtcctcttatttataaggtgttcaacctctactgttttatctgatgtgagacatataactcacacttgcacacaa 39914247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 32 - 137
Target Start/End: Original strand, 39336290 - 39336395
Alignment:
Q  32 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 131  Q
    ||||||| |||  ||||||||||||||  |||||| ||||||||  ||||||||||  |  |||||||||||||||   |||||||||||| ||||||||    
T  39336290 ccaaaaccttaaagcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccgatgtgggacatataactcacacttgcaca 39336389  T
Q  132 caatag 137  Q
    ||||||    
T  39336390 caatag 39336395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 50612534 - 50612610
Alignment:
Q  53 tttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 129  Q
    |||||| ||||||||||||||||| ||||||| ||||||| || |||||||||||   |||||||||||| ||||||    
T  50612534 tttatgagtcctcttacttataaggtgttcaatctttactattttatccgatgtgggacatataactcacacttgca 50612610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 121
Target Start/End: Original strand, 7767389 - 7767464
Alignment:
Q  46 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactca 121  Q
    ||||| ||||||| ||||||||| ||||||  ||| ||||||||||||||||||||||||||   |||||||||||    
T  7767389 caatgggtttatgagtcctcttagttataaagtgtccaacctttacttttctatccgatgtgggacatataactca 7767464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 31190091 - 31190012
Alignment:
Q  55 tatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    |||| ||||||| ||||||||| ||||||||||||||| || |||||||||||   ||||| |||||| |||||||||||    
T  31190091 tatgggtcctctaacttataaggtgttcaacctttactcttttatccgatgtgggacatatcactcacacttgcacacaa 31190012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 53118031 - 53118137
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||  ||| ||||||| |||| ||  |||||| ||||||||| ||||||||||||||| || |||||||| || | |||||||||||| |||    
T  53118031 cttacccaaaatcttaaggcaatgggttt-tgaatcctctcacttataaggtgttcaacctttactcttttatccgatatggaacatataactcacactt 53118129  T
Q  127 gcacacaa 134  Q
    || |||||    
T  53118130 gcccacaa 53118137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 3384322 - 3384427
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||||||| |||| | |||||||| |||||||| |||||||  |||| ||||| |||| || ||||  |||||   |||||||||||| |||    
T  3384322 cttacccaaaactttaaggcattaagtttatgggtcctcttccttataaagtgtttaacctatactgttttatcatatgtgggacatataactcacgctt 3384421  T
Q  127 gcacac 132  Q
    ||||||    
T  3384422 gcacac 3384427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 103
Target Start/End: Original strand, 33362345 - 33362425
Alignment:
Q  23 cacacttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccga 103  Q
    |||||||||||||||  ||| || |||| ||||||| ||||||||||||||||| | ||||||||||| | || |||||||    
T  33362345 cacacttacccaaaatcttaaggaaatgggtttatgggtcctcttacttataaggtattcaacctttattattttatccga 33362425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 37726572 - 37726504
Alignment:
Q  61 tcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 129  Q
    |||||||||||||||| | |||||| |||||| || ||||||||||||  |||||||||||| ||||||    
T  37726572 tcctcttacttataaggtattcaacatttactattttatccgatgtgagacatataactcacacttgca 37726504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 54018254 - 54018358
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| |||  |  ||||||| ||||||||||||||||| ||||||| ||||||| || |||||||||     |||||||||||| |||    
T  54018254 cttacccaaaaccttaaggcgttaggtttatgggtcctcttacttataaggtgttcaatctttactcttttatccgatgcaggacatataactcacactt 54018353  T
Q  127 gcaca 131  Q
    |||||    
T  54018354 gcaca 54018358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 3135129 - 3135224
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    ||||| |||||| ||| |||| || ||||||| || || ||||||||||| |||||||| |||||| || |||||||||||   ||||||||||||    
T  3135129 cttactcaaaaccttatggcagtgggtttatgggttcttttacttataaggtgttcaacatttactattttatccgatgtgggacatataactcac 3135224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 11661602 - 11661531
Alignment:
Q  62 cctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacaca 133  Q
    |||||||||||||||||||| |||| ||||| || |||||||||||   |||||||||||| |||| |||||    
T  11661602 cctcttacttataagatgtttaaccgttactattttatccgatgtgggacatataactcacacttgtacaca 11661531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 107
Target Start/End: Original strand, 42584903 - 42584958
Alignment:
Q  52 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    |||||||  |||||||||||||||| ||||||| ||||||| ||||||||||||||    
T  42584903 gtttatggatcctcttacttataaggtgttcaatctttactcttctatccgatgtg 42584958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 45395709 - 45395816
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| | ||||| |||||||  |||||||||||||||  |||| |||||||||| || ||| |||||||    |||||||| || |||    
T  45395709 cttacccaaaacattaagacaatgggtttatggatcctcttacttataacgtgtttaacctttactcttttattcgatgtgggatatataacttacactt 45395808  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  45395809 gcacacaa 45395816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 44160605 - 44160707
Alignment:
Q  32 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 131  Q
    ||||||| ||| | ||||| |||||||  |||||||| ||||||| ||||||||||||| | || ||||| || |||| ||||||||| || |||||| |    
T  44160605 ccaaaaccttaagacaatgggtttatggatcctcttatttataaggtgttcaacctttattgttttatccaatatgaaacatataactgacacttgcata 44160704  T
Q  132 caa 134  Q
    |||    
T  44160705 caa 44160707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 47964574 - 47964681
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||  ||||||| ||||||| |||||||    |||||||||  || ||||||||||||| |   |||| ||||||| |||    
T  47964574 cttacccaaaaccttaaggcaataggtttatgggtcctctcacttatatagcgttcaacctccacatttctatccgatgcgggacatacaactcacactt 47964673  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  47964674 gcacacaa 47964681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 122
Target Start/End: Complemental strand, 11662059 - 11661958
Alignment:
Q  22 tcacacttacccaaaa-ctttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactc 120  Q
    |||| ||||||||||| | ||| ||||||  ||||||| | ||||| |||| |||| ||||||||||||||| || ||||| |||||  |||| ||||||    
T  11662059 tcactcttacccaaaaaccttaaggcaattggtttatgaggcctctcacttttaaggtgttcaacctttactcttttatccaatgtggggcatttaactc 11661960  T
Q  121 ac 122  Q
    ||    
T  11661959 ac 11661958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 43346706 - 43346645
Alignment:
Q  73 taagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    |||| ||||||||||||||| || |||||||||||   |||| ||||||| |||||||||||    
T  43346706 taaggtgttcaacctttactattttatccgatgtgggacatacaactcacacttgcacacaa 43346645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 52635042 - 52634993
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataag 76  Q
    |||||||||||  ||| ||||||||||||||| ||||||||| |||||||    
T  52635042 cttacccaaaatcttaaggcaatgagtttatgggtcctcttatttataag 52634993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 12747871 - 12747915
Alignment:
Q  90 acttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||||||||||||||   |||||||||||| |||||||||||    
T  12747871 acttttctatccgatgtgggacatataactcacacttgcacacaa 12747915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 22303715 - 22303759
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttactt 71  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||    
T  22303715 cttacccaaaaccttaaggcaatgggtttatgggtcctcttactt 22303759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 5459 - 5352
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||| ||||||  ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||| | |||||||||||| |||    
T  5459 cttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactgttctatccgatgtggaacatataactcacactt 5360  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  5359 gcacacaa 5352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 5084 - 4977
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    ||||||||||||  || ||||||||||||||| ||| | ||||||||||||| || |||||||||| |||| ||||||||||  ||||||| |||| |||    
T  5084 cttacccaaaaccataaggcaatgagtttatgggtctttttacttataagatattaaacctttactgttctctccgatgtgagacatataattcacactt 4985  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  4984 gcacacaa 4977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 6e-28; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 7517682 - 7517575
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| |||    
T  7517682 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacactt 7517583  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  7517582 gcacacaa 7517575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 30245179 - 30245072
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||||||||||||| || ||||||||||| | |||||||||||| |||    
T  30245179 cttacccaaaaccttaaggcaatgagtttatgggtcgtcttacttataaggtgttcaacctttactcttttatccgatgtggaacatataactcacactt 30245080  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  30245079 gtacacaa 30245072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 23433 - 23540
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||  ||||||| ||||||||||||||||| ||||||||||||||| || ||||||||||| | ||||||||||||  ||    
T  23433 cttacccaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattgtatccgatgtggaacatataactcacaatt 23532  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  23533 gcacacaa 23540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 1085672 - 1085779
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||  ||||||||||||||| || |||||||||||   |||||||||||| |||    
T  1085672 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgggacatataactcacactt 1085771  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  1085772 gcacacaa 1085779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 16569298 - 16569191
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||| ||||| ||| ||||||| ||||||| ||||||||||||||||| | ||||||||||||| |||||||||||||||  |||||||||||| |||    
T  16569298 cttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcacactt 16569199  T
Q  127 gcacacaa 134  Q
    ||| ||||    
T  16569198 gcatacaa 16569191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 16596364 - 16596471
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||| ||||| ||| ||||||| ||||||| ||||||||||||||||| | ||||||||||||| |||||||||||||||  |||||||||||| |||    
T  16596364 cttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcacactt 16596463  T
Q  127 gcacacaa 134  Q
    ||| ||||    
T  16596464 gcatacaa 16596471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 28301616 - 28301706
Alignment:
Q  44 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||| ||||||| ||||||||||||||||| |||||| | ||||||||||||||||||||||  |||||||||||| |||||||||||    
T  28301616 ggcaatgggtttatgggtcctcttacttataaggtgttcagcttttacttttctatccgatgtgagacatataactcacacttgcacacaa 28301706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 37533067 - 37533168
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| || ||||| |||||   |||||||||||| ||||    
T  37533067 ttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtgggacatataactcacacttg 37533166  T
Q  128 ca 129  Q
    ||    
T  37533167 ca 37533168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 7554127 - 7554020
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||| ||| |||||||  |||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| |||    
T  7554127 cttacccaaaaccttaaggctatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacactt 7554028  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  7554027 gcacacaa 7554020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 22566718 - 22566825
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   ||||| |||||| |||    
T  22566718 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatattactcacactt 22566817  T
Q  127 gcacacaa 134  Q
    ||| ||||    
T  22566818 gcatacaa 22566825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 22567095 - 22567201
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||| ||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| || ||||||||||| | ||||| |||||| |||    
T  22567095 cttaccaaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgga-catattactcacactt 22567193  T
Q  127 gcacacaa 134  Q
    ||| ||||    
T  22567194 gcatacaa 22567201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 30244372 - 30244265
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| | ||||||||||||| || |||||||||||   |||||||||||| |||    
T  30244372 cttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtcttcaacctttactcttttatccgatgtgggacatataactcacactt 30244273  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  30244272 gtacacaa 30244265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 45434738 - 45434631
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| |||| | |||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||   ||||||||| || |||    
T  45434738 cttacccaaaaccttaaggcagtaagtttatgggtcctcttacttataaggtgttcaacctttacttttttatccgatgtgggacatataacttacactt 45434639  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  45434638 gtacacaa 45434631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 134
Target Start/End: Complemental strand, 43241596 - 43241490
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||| ||||| ||| | |||| |||||||| ||||| ||||||||||| ||||||||||||| |||| ||||||||||| | |||||||||||| ||||    
T  43241596 ttacctaaaaccttaagtcaataagtttatgagtccttttacttataaggtgttcaacctttatttttttatccgatgtggaacatataactcacacttg 43241497  T
Q  128 cacacaa 134  Q
    |||||||    
T  43241496 cacacaa 43241490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 6054662 - 6054570
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataact 119  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| |||||||| |||||| || ||||||||||||  |||||||||    
T  6054662 cttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtgagacatataact 6054570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 40230348 - 40230456
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||||||||| ||| | | ||| ||||||| |||||||||||||||||||||||||| ||||||||| ||| |||||||   ||||||||| || ||||    
T  40230348 ttacccaaaaccttaagactatgggtttatgggtcctcttacttataagatgttcaacttttacttttttattcgatgtgggacatataacttacacttg 40230447  T
Q  128 cacacaata 136  Q
    |||||||||    
T  40230448 cacacaata 40230456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 118357 - 118464
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| || |||| |||||||  ||||||||||||| || ||||||||||||||||||||||| ||||||   ||||||||| || |||    
T  118357 cttacccaaaaccttacggtaatgggtttatggatcctcttacttattaggtgttcaacctttacttttctatctgatgtgggacatataacttacactt 118456  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  118457 gcacacaa 118464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 11845293 - 11845198
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||| ||||||| ||| |||||||  |||||| ||||||||||||||||| ||||||||||||||| || ||||||||||| | ||||||||||||    
T  11845293 cttatccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatataactcac 11845198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 24177537 - 24177430
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||| ||||||||| ||||||| ||||||| |||| |||||||||||| |||||| |||||||| || |||||||||||   |||||||||||  |||    
T  24177537 cttaccaaaaactttaaggcaatgggtttatgggtccgcttacttataaggtgttcagcctttactcttttatccgatgtgggacatataactcatactt 24177438  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  24177437 gcacacaa 24177430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 34218090 - 34218185
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||||||||| ||| | ||||| ||||||| ||||||| ||||||||| |||||||| ||||||||| ||||||||||||  ||||||||||||    
T  34218090 cttacccaaaaccttaagacaatgggtttatgagtcctctcacttataaggtgttcaacatttacttttttatccgatgtgagacatataactcac 34218185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 40094830 - 40094937
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| | | ||| ||||||| ||||||||||||||||| |||| |||||||||| || ||| ||||||||  |||||||||||| |||    
T  40094830 cttacccaaaaccttaagacgatgggtttatgggtcctcttacttataaggtgttgaacctttactcttttattcgatgtgagacatataactcacactt 40094929  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  40094930 gcacacaa 40094937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 45433343 - 45433236
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||  ||| ||||||  ||||||| || |||||||||||||| ||||||||||||||| || ||||||||||| | |||||||||||| |||    
T  45433343 cttacccaaaatcttaaggcaataggtttatgagttctcttacttataaggtgttcaacctttactcttttatccgatgtggatcatataactcacactt 45433244  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  45433243 gtacacaa 45433236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 19122833 - 19122740
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactca 121  Q
    |||||||||||| ||| |||||||  |||||| ||||||||||||||||| ||||||||||||||| || ||||||||||| | |||||||||||    
T  19122833 cttacccaaaaccttaaggcaatggatttatgagtcctcttacttataaggtgttcaacctttactattttatccgatgtgga-catataactca 19122740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 47129195 - 47129097
Alignment:
Q  29 tacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    |||||||||| |||  || ||| ||||||| |||||||||||||||||| |||||||||||||| || ||||||||||||  |||||||||||| ||||    
T  47129195 tacccaaaaccttaaagcgatgggtttatgggtcctcttacttataagaggttcaacctttactattttatccgatgtgagacatataactcacacttg 47129097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 8128497 - 8128604
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||| ||||||| ||| ||  ||| ||||||| |||||||||| |||||| ||||||||||||| ||||||||||||| ||   |||||||||||| |||    
T  8128497 cttaaccaaaaccttaaggttatgggtttatgggtcctcttacatataaggtgttcaacctttatttttctatccgatatgggacatataactcacactt 8128596  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  8128597 gcacacaa 8128604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 36623060 - 36622953
Alignment:
Q  29 tacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgc 128  Q
    |||||||||| ||| |||||||  ||||||  ||||| ||||||||| ||||| |||||||||| || |||||||||||   |||||||||||| |||||    
T  36623060 tacccaaaaccttaaggcaatggatttatggatcctcctacttataaaatgtttaacctttactattttatccgatgtgggacatataactcacacttgc 36622961  T
Q  129 acacaata 136  Q
    ||||||||    
T  36622960 acacaata 36622953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 45754817 - 45754711
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||| ||| ||||||| ||| ||||||||||||| |||||||| |||||| || ||||||||||| | |||||||||||| |||    
T  45754817 cttacccaaaaccttaaggctatgggtttatgagtcatcttacttataaggtgttcaacatttactattttatccgatgtgga-catataactcacactt 45754719  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  45754718 gtacacaa 45754711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 29157667 - 29157565
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| |||||||  |||||| ||| ||||||||||||| ||||||||||||||| || |||||| ||||   |||||||||||| |||    
T  29157667 cttacccaaaaccttaaggcaatggatttatgggtcgtcttacttataaggtgttcaacctttactattttatccggtgtgggacatataactcacactt 29157568  T
Q  127 gca 129  Q
    |||    
T  29157567 gca 29157565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 9901745 - 9901638
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| | |||||||||||||  |||||| || |||||||||||||||||||||| || ||||||||||| | |||||||||||| |||    
T  9901745 cttacccaaaaccttaagacaatgagtttatggatcctct-acgtataagatgttcaacctttactgttttatccgatgtgga-catataactcacactt 9901648  T
Q  127 gcacacaata 136  Q
      ||||||||    
T  9901647 atacacaata 9901638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 134
Target Start/End: Original strand, 36109007 - 36109080
Alignment:
Q  61 tcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||   ||||||||||| |||||||||||    
T  36109007 tcctcttacttataaggtgttcaacctttactcttttatccgatgtgagaaatataactcacacttgcacacaa 36109080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 20599416 - 20599321
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||||||||| ||| |||||||||||||| |||||||||| ||||||  |||| | ||||||||||| |||||||| ||   ||||||||||||    
T  20599416 cttacccaaaacgttaaggcaatgagtttatatgtcctcttatttataaagtgtttatcctttacttttttatccgatatgggacatataactcac 20599321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 36939790 - 36939893
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||||||||| ||| |||||||  |||||| ||||||||||||||||| |||||||| |||||| || ||| |||| ||   |||||||||||| ||||    
T  36939790 ttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacttttactattttatacgatttgggacatataactcacacttg 36939889  T
Q  128 caca 131  Q
    ||||    
T  36939890 caca 36939893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 37533420 - 37533515
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||||||||| ||| |||||||  |||||| ||||||||||||||||| ||||||||||||||| || ||| | ||||  | ||||||||||||    
T  37533420 cttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattttattcaatgtagaacatataactcac 37533515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 1085304 - 1085381
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgat 104  Q
    |||||||||||| ||| ||||||||||||||| || ||||||||||| || |||||||| |||||| || ||||||||    
T  1085304 cttacccaaaaccttaaggcaatgagtttatgggttctcttacttatgagttgttcaacttttactattttatccgat 1085381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 134
Target Start/End: Complemental strand, 30245561 - 30245489
Alignment:
Q  62 cctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||||||||||| ||||||||||||||| || |||| ||||||   |||||||||||| |||||||||||    
T  30245561 cctcttacttataaggtgttcaacctttactcttttatctgatgtgggacatataactcacacttgcacacaa 30245489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 134
Target Start/End: Complemental strand, 30255406 - 30255334
Alignment:
Q  62 cctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||   |||||||| ||| |||||||||||    
T  30255406 cctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataacgcacacttgcacacaa 30255334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 14681612 - 14681510
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| | ||||| ||||||| | ||||||||||| ||| ||||||||||||||| || |||| ||||||   ||||||||| || |||    
T  14681612 cttacccaaaaccttaagacaatgggtttatgggccctcttacttacaaggtgttcaacctttactattttatctgatgtgggacatataacttacactt 14681513  T
Q  127 gca 129  Q
    |||    
T  14681512 gca 14681510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 134
Target Start/End: Complemental strand, 30244770 - 30244696
Alignment:
Q  60 gtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||||| ||||||| ||||||||||||||| || ||||| |||||   |||||||||||| |||||||||||    
T  30244770 gtcctcttatttataaggtgttcaacctttactcttttatccaatgtgggacatataactcacacttgcacacaa 30244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 30253594 - 30253534
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacct 87  Q
    |||||||||||| ||| ||||||||||||||| || |||||||||||||| | ||||||||    
T  30253594 cttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtcttcaacct 30253534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 41910669 - 41910757
Alignment:
Q  46 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||| ||||||| ||||||| | ||||||| | ||||||||||||| || |||||||||||   |||||||||||| ||| |||||||    
T  41910669 caatgggtttatgggtcctctcagttataaggtattcaacctttactcttttatccgatgtgggacatataactcacacttacacacaa 41910757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 134
Target Start/End: Original strand, 36534865 - 36534947
Alignment:
Q  52 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||| ||||||||||||||||| |||||||||| |||| || ||||||| |||   ||||||| | || |||||||||||    
T  36534865 gtttatgggtcctcttacttataaggtgttcaacctctactgttttatccgaggtgggacatataagttacacttgcacacaa 36534947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 24838757 - 24838850
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcct-cttacttataagatgttcaacctttacttttctatccgatgtgaagcatataact 119  Q
    |||||||||||| ||| | ||| | |||||||  |||| |||||||||||| ||||||||||||||| || ||| ||||||||  |||||||||    
T  24838757 cttacccaaaaccttaagacaacgggtttatggatccttcttacttataaggtgttcaacctttactcttttattcgatgtgagacatataact 24838850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 37346020 - 37345911
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccg--atgtgaagcatataactcaccc 124  Q
    ||||| |||||||||| ||||||  ||||||| ||| ||| |||||||| ||||| |||||  ||||||||||| |  || |||   ||||||||||| |    
T  37346020 cttactcaaaactttaaggcaatatgtttatgggtcttctcacttataaaatgtttaacctccacttttctatcagatatatgacatatataactcacac 37345921  T
Q  125 ttgcacacaa 134  Q
    ||||||||||    
T  37345920 ttgcacacaa 37345911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 134
Target Start/End: Original strand, 36967344 - 36967392
Alignment:
Q  86 ctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    |||||||||| ||||||||||||  |||||||||||| |||| ||||||    
T  36967344 ctttacttttttatccgatgtgagacatataactcacacttgtacacaa 36967392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 26074714 - 26074607
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||| || | |||||||||||| |||    
T  26074714 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatatggaacatataactcacactt 26074615  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  26074614 gtacacaa 26074607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 122
Target Start/End: Complemental strand, 41170736 - 41170641
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| || |||||||||||   ||||||||||||    
T  41170736 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatataactcac 41170641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 41632884 - 41632777
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||  |||  ||| || ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||| || |||    
T  41632884 cttacccaaaatcttaaagcattgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataacttacactt 41632785  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  41632784 gcacacaa 41632777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 26075219 - 26075325
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||||||||||||  ||||||| |||| ||||    
T  26075219 ttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgagacatataaatcacacttg 26075318  T
Q  128 cacacaa 134  Q
     ||||||    
T  26075319 tacacaa 26075325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 9498710 - 9498805
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||||||||  ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||  ||||||||||||    
T  9498710 cttacccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattctatctgatgtgagacatataactcac 9498805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 26074202 - 26074309
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||| ||| |||||||||| ||| || |||||||||||||||||| |||||||||||   |||||||||||| |||    
T  26074202 cttacccaaaaccttaaggcaatgggttcatgggtcctcttacatatgaggtgttcaacctttacttttttatccgatgtgtgacatataactcacactt 26074301  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  26074302 gcacacaa 26074309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 40296371 - 40296477
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| | | ||||||| ||||||| ||||||||||||||||| |||||||||||| || || |||||||||||   |||||||||||| |||    
T  40296371 cttacccaaaacctcaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttctattttatccgatgtgggacatataactcacactt 40296470  T
Q  127 gcacaca 133  Q
    |||||||    
T  40296471 gcacaca 40296477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 11417033 - 11417138
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    ||||| |||||| ||| ||||||| |||||||  |||||||||||||||| ||||||||||||||| || ||||||||||| | |||||||||||  |||    
T  11417033 cttacacaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatataactca--ctt 11417130  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  11417131 gcacacaa 11417138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 18603176 - 18603276
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||| ||||||   |||||||||||| |||    
T  18603176 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacactt 18603275  T
Q  127 g 127  Q
    |    
T  18603276 g 18603276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 299591 - 299484
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    ||||| |||||| ||| ||| ||||||||||| ||| ||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| |||    
T  299591 cttacacaaaaccttaaggctatgagtttatgggtcatcttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacactt 299492  T
Q  127 gcacacaa 134  Q
    || |||||    
T  299491 gcgcacaa 299484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 6224298 - 6224191
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||| ||||| ||| ||| ||||||||||| ||||||||||||||||| ||||||||||||||| || ||||||| |||   |||||||||||| |||    
T  6224298 cttaccaaaaaccttaaggcgatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgaagtgggacatataactcacactt 6224199  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  6224198 gtacacaa 6224191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 13415816 - 13415923
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| || |||  ||||||| ||||||||||||||||| |||||||||||||||  | |||||||||||   |||||||||||| |||    
T  13415816 cttacccaaaaccttaaggtaataggtttatgggtcctcttacttataaggtgttcaacctttactaatttatccgatgtgggacatataactcacactt 13415915  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  13415916 gcacacaa 13415923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Complemental strand, 15370201 - 15370094
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| |||  ||  |||||| ||||||||||||||||||||||||||||||||| || ||| |||||||   |||||||||||| |||    
T  15370201 cttacccaaaaccttaaggctgtggatttatgggtcctcttacttataagatgttcaacctttactattttattcgatgtgggacatataactcacactt 15370102  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  15370101 gcacacaa 15370094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 36568623 - 36568730
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||| ||||| ||| ||||||| ||||| | ||| ||| ||||||||| |||||||| |||||||||||||||||||||   |||||||||||| |||    
T  36568623 cttaccaaaaaccttaaggcaatgggtttacgggtcatctcacttataaggtgttcaacttttacttttctatccgatgtgggacatataactcacactt 36568722  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  36568723 gcacacaa 36568730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 6500552 - 6500451
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| |||||   ||||||||||||||||| ||||||||||||||| || ||||||||||| | |||||||||||| |||    
T  6500552 cttacccaaaaccttaaggcaatgggtttaaaggtcctcttacttataaggtgttcaacctttactattttatccgatgtgga-catataactcacactt 6500454  T
Q  127 gca 129  Q
    |||    
T  6500453 gca 6500451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 6500924 - 6500823
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||| ||||||| ||| ||||||||||||||| ||||| ||| ||||||| ||||||||||||||| || ||||||||||| | |||||||||||| |||    
T  6500924 cttatccaaaaccttaaggcaatgagtttatgggtccttttatttataaggtgttcaacctttactattttatccgatgtgga-catataactcacactt 6500826  T
Q  127 gca 129  Q
    |||    
T  6500825 gca 6500823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 31509708 - 31509618
Alignment:
Q  44 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||||||||||| ||||||| ||||||||  || |||||||  |||||||||||||||||||  |||||||||||| |||||||||||    
T  31509708 ggcaatgagtttatgagtcctctcacttataaagtgctcaacctccacttttctatccgatgtgagacatataactcacacttgcacacaa 31509618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 32487495 - 32487394
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| |||||||||||||| || ||||||||||||||| || |||||||||||   |||||||||||| |||    
T  32487495 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttat-aggtgttcaacctttactattttatccgatgtgggacatataactcacactt 32487397  T
Q  127 gca 129  Q
    |||    
T  32487396 gca 32487394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 107
Target Start/End: Complemental strand, 42508707 - 42508634
Alignment:
Q  34 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    ||||| ||| ||||||| ||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  42508707 aaaaccttaaggcaatgggtttatgagtcctcttacttattagatgtttaacctttacttttctatccgatgtg 42508634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 52 - 134
Target Start/End: Original strand, 1028598 - 1028680
Alignment:
Q  52 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||| ||||||||||||||||  |||||| |||||||||||||||||||||||   |||||||||||| |||| ||||||    
T  1028598 gtttatgggtcctcttacttataaagtgttcatcctttacttttctatccgatgtgggacatataactcacacttgtacacaa 1028680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 3295405 - 3295506
Alignment:
Q  32 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcaca 131  Q
    ||||||| ||| ||||||  ||||||| ||||||||||||||||| ||||||||||||||| || ||||||||||| | ||||| |||||| ||| ||||    
T  3295405 ccaaaaccttaaggcaattggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatat-actcacacttccaca 3295503  T
Q  132 caa 134  Q
    |||    
T  3295504 caa 3295506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 3295073 - 3295176
Alignment:
Q  29 tacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgc 128  Q
    |||||||||| | | ||||||| ||||||| ||| ||||||||||||| ||||||||||||||| || |||||||||||   ||||| |||||| |||||    
T  3295073 tacccaaaacctcaaggcaatgggtttatgggtcttcttacttataaggtgttcaacctttactattttatccgatgtgggacatat-actcacacttgc 3295171  T
Q  129 acaca 133  Q
    |||||    
T  3295172 acaca 3295176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 34753081 - 34753161
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    |||||||||||| ||| ||||||  ||||||| ||| ||||||||||||| |||||||| ||||||||||||||| |||||    
T  34753081 cttacccaaaaccttaaggcaatcggtttatgggtcttcttacttataaggtgttcaacttttacttttctatccaatgtg 34753161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 35150107 - 35150000
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||||||||| ||| | |||||  |||||| ||| ||||||||||||| ||||||||||| ||| || |||||||||||   |||||||||||| ||||    
T  35150107 ttacccaaaaccttaagacaatggatttatgggtc-tcttacttataaggtgttcaaccttgactcttttatccgatgtgggacatataactcacacttg 35150009  T
Q  128 cacacaata 136  Q
    |||||||||    
T  35150008 cacacaata 35150000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 12662708 - 12662815
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||  ||| | |||||  |||||| ||  |||||||||||| |||||||||||||||| || |||||||||||   |||||||||||| |||    
T  12662708 cttacccaaaaacttaagacaatggatttatgggttttcttacttataaaatgttcaacctttactattttatccgatgtgggacatataactcacactt 12662807  T
Q  127 gcacacaa 134  Q
    ||||||||    
T  12662808 gcacacaa 12662815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 36492293 - 36492380
Alignment:
Q  47 aatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    |||| ||||||  ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| |||||| ||||    
T  36492293 aatgtgtttattggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgcaaacaa 36492380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 2411109 - 2411030
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 106  Q
    ||||| |||||| ||| |||||| |||||||| || |||||||||| |||||||||||| ||||||| ||||||| ||||    
T  2411109 cttactcaaaaccttaaggcaataagtttatgggttctcttacttacaagatgttcaacttttacttctctatccaatgt 2411030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 25328037 - 25327958
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 106  Q
    |||||||||||| ||| |||| |  ||||||| ||||||||||||||||| |||||||| |||||| || ||||||||||    
T  25328037 cttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacttttactgttttatccgatgt 25327958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 26074395 - 26074320
Alignment:
Q  52 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||||| ||||||||||||||||| ||||||| ||||| ||||||||| ||||||   |||||||||||| ||||    
T  26074395 gtttatgggtcctcttacttataaggtgttcaatctttagttttctatctgatgtgggacatataactcacacttg 26074320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 38427610 - 38427555
Alignment:
Q  67 tacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    ||||||||||||||||||||||||||||||||||| |||||   ||||||||||||    
T  38427610 tacttataagatgttcaacctttacttttctatccaatgtgggacatataactcac 38427555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 42405652 - 42405759
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| |||| |  ||||||| ||||| |||||| |||| ||||||||||||||| || ||||||||||    |||||||||||| |||    
T  42405652 cttacccaaaaccttaaggcattaggtttatgagtccttttacttgtaaggtgttcaacctttactattttatccgatgttggacatataactcacactt 42405751  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  42405752 gtacacaa 42405759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 134
Target Start/End: Original strand, 26074839 - 26074945
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||||||||| ||| | ||||  ||||||| |||||| ||||||||   ||||||||||||||| || |||||||||||   |||||||||||| ||||    
T  26074839 ttacccaaaaccttaagacaataggtttatgggtcctcctacttatattgtgttcaacctttactcttttatccgatgtgggacatataactcacacttg 26074938  T
Q  128 cacacaa 134  Q
     ||||||    
T  26074939 tacacaa 26074945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 26590966 - 26591068
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    ||||| |||||| ||| |||| ||| ||||||  |||||||||||||||| ||||||||||||||||||| || |||| || | ||| ||| |||| |||    
T  26590966 cttactcaaaaccttaaggcattgaatttatggatcctcttacttataaggtgttcaacctttacttttcgattcgatatggaacatttaaatcacactt 26591065  T
Q  127 gca 129  Q
    |||    
T  26591066 gca 26591068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 35914939 - 35914857
Alignment:
Q  39 tttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactca 121  Q
    ||||||||||||  |||| | ||| |||||||||||| |||||||||||||||| || |||||||||||   |||||||||||    
T  35914939 tttagggcaatggatttacgggtcttcttacttataaaatgttcaacctttactcttttatccgatgtgtgacatataactca 35914857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 42524792 - 42524719
Alignment:
Q  53 tttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    |||||| ||||||||| | |||||||||||||| ||||||||||||||||||||||  ||||||| |||| ||||    
T  42524792 tttatgagtcctcttattcataagatgttcaac-tttacttttctatccgatgtgagacatataattcacacttg 42524719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 27502117 - 27502194
Alignment:
Q  52 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 129  Q
    ||||||| ||||||||||||||||| |||| |||||||||| || ||||| |||||   |||||||||||| ||||||    
T  27502117 gtttatgggtcctcttacttataaggtgtttaacctttactattttatccaatgtgggacatataactcacacttgca 27502194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 31509816 - 31509752
Alignment:
Q  44 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 108  Q
    ||||||||||||||| ||||||| ||||||||  || |||||||  |||||||||||||||||||    
T  31509816 ggcaatgagtttatgagtcctctcacttataaagtgctcaacctccacttttctatccgatgtga 31509752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 623920 - 623818
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    ||||| |||||| ||| ||| || ||||||||  ||  ||||||| |||  ||||||||||||||| || ||||||||||||  |||||||||||| |||    
T  623920 cttactcaaaaccttaaggctataagtttatggctcaacttacttgtaaagtgttcaacctttactattatatccgatgtgagacatataactcacactt 623821  T
Q  127 gca 129  Q
    |||    
T  623820 gca 623818  T

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Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 624298 - 624196
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| | | ||| ||| ||||||| ||| ||||||||||||  ||||||||||||||| || ||| | |||||   |||||||||||| |||    
T  624298 cttacccaaaacctcaaggctatgggtttatgggtcatcttacttataacgtgttcaacctttactattttatacaatgtgggacatataactcacactt 624199  T
Q  127 gca 129  Q
    |||    
T  624198 gca 624196  T

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Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 129
Target Start/End: Original strand, 29549311 - 29549413
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||| ||||||| ||| || |||| ||||||| ||| ||||||||||| | |||||| |||||||| || |||| ||| || | |||||||||||| |||    
T  29549311 cttatccaaaaccttaaggtaatgtgtttatgggtcttcttacttatatggtgttcatcctttactattttatctgatatggaacatataactcacactt 29549410  T
Q  127 gca 129  Q
    |||    
T  29549411 gca 29549413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 15370504 - 15370439
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 92  Q
    ||||| |||||| ||| ||| ||| ||||||| ||||||||||||||||| |||||||| ||||||    
T  15370504 cttacgcaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaacatttact 15370439  T

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Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 24489262 - 24489367
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    ||||| |||||  ||| ||||||| ||||||| ||  ||||||| ||||| |||| ||||||| |||||||||| ||||||   |||||||||||| |||    
T  24489262 cttacgcaaaatcttaaggcaatgggtttatgggt--tcttactaataaggtgtttaaccttttcttttctatctgatgtgggacatataactcacactt 24489359  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  24489360 gaacacaa 24489367  T

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Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 33747873 - 33747793
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 107  Q
    |||| ||||||  ||| |||||||||||||||  |||||||||||||||  | || |||||||||| || |||||||||||    
T  33747873 cttatccaaaatcttaaggcaatgagtttatggatcctcttacttataaagtatttaacctttactattttatccgatgtg 33747793  T

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Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 36521952 - 36522059
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataaga-tgttcaacctttacttttctatccgatgtgaagcatataactcaccct 125  Q
    |||||||||||| ||| ||||||  ||||||| ||||||| | ||| |||| ||||||||||  ||||||||||| ||||||   |||||||||||| ||    
T  36521952 cttacccaaaaccttaaggcaattggtttatgggtcctctcattta-aagagtgttcaacctcaacttttctatctgatgtgggacatataactcacact 36522050  T
Q  126 tgcacacaa 134  Q
    ||| |||||    
T  36522051 tgcgcacaa 36522059  T

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Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 122
Target Start/End: Original strand, 36522293 - 36522388
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcac 122  Q
    |||||||||||| ||| |  |||| ||||||  ||||||| |||||||| ||||||||| |  | |||||||||| ||||||  ||||||||||||    
T  36522293 cttacccaaaaccttaagataatgggtttattggtcctctcacttataaaatgttcaacttccatttttctatccaatgtgagacatataactcac 36522388  T

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Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 121
Target Start/End: Original strand, 41635247 - 41635341
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactca 121  Q
    |||||| |||| |||| | |||||  ||||||  |||||||| ||||||| |||||||| |||||| || |||| |||| ||| |||||||||||    
T  41635247 cttacctaaaattttaagacaatggatttatggatcctcttatttataaggtgttcaacatttactcttttatctgatgggaaacatataactca 41635341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 19275630 - 19275558
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatc 100  Q
    |||||||||||  ||| | |||||| |||||| ||| |||| |||||||| |||||||||| ||||||||||||    
T  19275630 cttacccaaaatcttaagacaatgaatttatgggtcttcttccttataag-tgttcaacctctacttttctatc 19275558  T

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Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 7768925 - 7768873
Alignment:
Q  54 ttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 106  Q
    ||||| ||||| ||||||||||| ||||||||||||| | || ||||||||||    
T  7768925 ttatgggtccttttacttataaggtgttcaacctttattattttatccgatgt 7768873  T

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Target: scaffold0734 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 5862 - 5772
Alignment:
Q  44 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| |||||||||||    
T  5862 ggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgcgacatataactcacacttgcacacaa 5772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 5491 - 5391
Alignment:
Q  34 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacaca 133  Q
    ||||||||| | ||||  ||||||| | ||||||||||||||| ||||||||||||||| || ||||||||||    |||||||||||| ||||||||||    
T  5491 aaaactttaagacaatatgtttatgggccctcttacttataaggtgttcaacctttactattttatccgatgtaggacatataactcacacttgcacaca 5392  T
Q  134 a 134  Q
    |    
T  5391 a 5391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 127
Target Start/End: Original strand, 570 - 670
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || || ||||||||   |||||||||||| |||    
T  570 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatataactcacactt 669  T
Q  127 g 127  Q
    |    
T  670 g 670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 60 - 129
Target Start/End: Original strand, 231 - 300
Alignment:
Q  60 gtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgca 129  Q
    ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||||||||| ||||||    
T  231 gtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 1162 - 1269
Alignment:
Q  27 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcaccctt 126  Q
    |||||||||||| ||| ||||||| ||||||| ||||| || |||||||| ||||||||||||||| || ||||| |||||   |||||||||||| |||    
T  1162 cttacccaaaaccttaaggcaatgggtttatgagtcctttttcttataaggtgttcaacctttactcttttatccaatgtgggacatataactcacactt 1261  T
Q  127 gcacacaa 134  Q
    | ||||||    
T  1262 gtacacaa 1269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 3091 - 3148
Alignment:
Q  77 atgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacacaa 134  Q
    |||||||||||||||| || |||||||||||   |||||||||||| | |||||||||    
T  3091 atgttcaacctttactcttttatccgatgtgggacatataactcacacctgcacacaa 3148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 47461 - 47356
Alignment:
Q  28 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||||||||||||| ||||||| |||||||  | |||||||||||||| ||||||| ||||||| || |||| |||||||  ||| ||| |||| ||||    
T  47461 ttacccaaaactttaaggcaatgggtttatggattctcttacttataaggtgttcaaactttactattttatcggatgtgagacatttaattcacacttg 47362  T
Q  128 cacaca 133  Q
    ||||||    
T  47361 cacaca 47356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 134
Target Start/End: Original strand, 17519 - 17619
Alignment:
Q  34 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttgcacaca 133  Q
    ||||| ||| ||| ||| ||||||| ||||||||||||| ||| ||||||||||||||| || |||| ||||||   |||||||||||| ||||||||||    
T  17519 aaaaccttaaggctatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtgtgacatataactcacacttgcacaca 17618  T
Q  134 a 134  Q
    |    
T  17619 a 17619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 10192 - 10267
Alignment:
Q  52 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatataactcacccttg 127  Q
    ||||||| ||||||||||||||||| |||||||| |||||  || ||||||||||||  |||||||||||| ||||    
T  10192 gtttatgggtcctcttacttataaggtgttcaacttttaccattttatccgatgtgagacatataactcacacttg 10267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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