View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10481A_low_132 (Length: 348)

Name: NF10481A_low_132
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10481A_low_132
NF10481A_low_132
[»] chr7 (48 HSPs)
chr7 (26-226)||(13256281-13256481)
chr7 (26-203)||(37380469-37380647)
chr7 (38-203)||(17467668-17467834)
chr7 (38-203)||(17585380-17585546)
chr7 (21-278)||(13866341-13866599)
chr7 (18-177)||(3048995-3049154)
chr7 (64-226)||(48274108-48274270)
chr7 (54-226)||(3289021-3289193)
chr7 (64-220)||(19486233-19486389)
chr7 (64-196)||(4280750-4280881)
chr7 (68-196)||(21734710-21734841)
chr7 (80-196)||(21734151-21734269)
chr7 (37-185)||(11054311-11054458)
chr7 (71-162)||(28720332-28720423)
chr7 (37-272)||(42056883-42057117)
chr7 (67-179)||(370704-370815)
chr7 (64-163)||(10063205-10063304)
chr7 (61-196)||(40554808-40554942)
chr7 (64-174)||(37784671-37784781)
chr7 (67-179)||(13757987-13758098)
chr7 (67-179)||(14251426-14251537)
chr7 (62-280)||(16383369-16383588)
chr7 (61-152)||(8756483-8756574)
chr7 (67-165)||(2190876-2190974)
chr7 (62-179)||(15951319-15951435)
chr7 (62-281)||(32494630-32494850)
chr7 (71-174)||(3170734-3170836)
chr7 (59-158)||(13698971-13699070)
chr7 (69-179)||(15927186-15927296)
chr7 (61-159)||(13898098-13898196)
chr7 (67-177)||(26070944-26071054)
chr7 (67-177)||(26094731-26094841)
chr7 (62-281)||(27102065-27102285)
chr7 (62-281)||(27109413-27109633)
chr7 (61-158)||(29004694-29004791)
chr7 (67-179)||(18980548-18980659)
chr7 (66-177)||(111955-112066)
chr7 (67-272)||(15525159-15525364)
chr7 (67-177)||(2028378-2028488)
chr7 (61-162)||(33001787-33001886)
chr7 (62-179)||(7822336-7822452)
chr7 (62-179)||(7829647-7829763)
chr7 (62-179)||(27176041-27176157)
chr7 (62-179)||(38784261-38784377)
chr7 (113-158)||(48744207-48744252)
chr7 (66-165)||(3894492-3894591)
chr7 (37-166)||(25123885-25124013)
chr7 (209-272)||(25124043-25124107)
[»] chr3 (62 HSPs)
chr3 (26-226)||(12536240-12536440)
chr3 (21-226)||(15517237-15517442)
chr3 (26-226)||(34851562-34851761)
chr3 (26-203)||(17547753-17547930)
chr3 (38-209)||(11849872-11850043)
chr3 (28-185)||(23395317-23395474)
chr3 (26-203)||(20188314-20188493)
chr3 (64-203)||(29172136-29172275)
chr3 (26-177)||(38167327-38167478)
chr3 (64-220)||(37641765-37641921)
chr3 (64-220)||(36167156-36167312)
chr3 (64-278)||(8604463-8604678)
chr3 (64-226)||(22147021-22147183)
chr3 (64-185)||(13511691-13511812)
chr3 (21-177)||(23491785-23491941)
chr3 (64-220)||(21619007-21619163)
chr3 (87-196)||(24340236-24340345)
chr3 (64-185)||(12158908-12159028)
chr3 (64-203)||(52338237-52338376)
chr3 (64-226)||(10550929-10551091)
chr3 (64-194)||(13968093-13968222)
chr3 (64-194)||(13973568-13973697)
chr3 (113-210)||(13667362-13667459)
chr3 (37-272)||(53770468-53770702)
chr3 (62-162)||(50351148-50351248)
chr3 (61-162)||(9511245-9511346)
chr3 (61-162)||(9519220-9519321)
chr3 (62-179)||(16820749-16820865)
chr3 (64-196)||(14818710-14818842)
chr3 (67-179)||(18910610-18910721)
chr3 (59-159)||(37038669-37038769)
chr3 (65-185)||(45530910-45531030)
chr3 (64-278)||(13326952-13327166)
chr3 (61-159)||(3394083-3394181)
chr3 (64-182)||(17100106-17100224)
chr3 (64-278)||(11061587-11061802)
chr3 (62-162)||(17956530-17956630)
chr3 (62-162)||(28557657-28557757)
chr3 (100-196)||(52212722-52212818)
chr3 (71-281)||(54038706-54038917)
chr3 (61-159)||(13025897-13025995)
chr3 (61-159)||(13029489-13029587)
chr3 (61-159)||(42324303-42324400)
chr3 (37-278)||(54423440-54423682)
chr3 (61-158)||(18366841-18366938)
chr3 (62-179)||(30206849-30206965)
chr3 (62-162)||(40039441-40039541)
chr3 (37-272)||(16260889-16261123)
chr3 (107-179)||(17758759-17758830)
chr3 (107-179)||(19060079-19060150)
chr3 (37-272)||(51961555-51961788)
chr3 (64-278)||(11882630-11882844)
chr3 (71-154)||(19430553-19430636)
chr3 (61-159)||(178810-178908)
chr3 (61-159)||(17513452-17513550)
chr3 (62-281)||(1468167-1468387)
chr3 (62-179)||(16934513-16934629)
chr3 (61-156)||(12276422-12276517)
chr3 (62-179)||(49232045-49232161)
chr3 (63-176)||(2843646-2843758)
chr3 (64-142)||(20417784-20417862)
chr3 (113-174)||(15045662-15045723)
[»] scaffold0004 (4 HSPs)
scaffold0004 (21-226)||(75374-75579)
scaffold0004 (26-196)||(60016-60186)
scaffold0004 (21-226)||(72524-72732)
scaffold0004 (37-110)||(187619-187691)
[»] chr2 (38 HSPs)
chr2 (21-226)||(22703559-22703764)
chr2 (21-226)||(24087831-24088036)
chr2 (26-203)||(6477518-6477695)
chr2 (82-335)||(33127684-33127936)
chr2 (32-203)||(45617893-45618064)
chr2 (65-185)||(19358513-19358633)
chr2 (62-165)||(20273231-20273334)
chr2 (37-278)||(9653472-9653712)
chr2 (64-194)||(27366844-27366973)
chr2 (71-179)||(34877461-34877569)
chr2 (37-168)||(19659475-19659605)
chr2 (62-162)||(16935047-16935147)
chr2 (62-162)||(17005707-17005807)
chr2 (66-179)||(42178489-42178601)
chr2 (67-179)||(12642170-12642281)
chr2 (37-272)||(21274641-21274875)
chr2 (67-278)||(36891263-36891474)
chr2 (70-179)||(12636396-12636504)
chr2 (62-281)||(12727998-12728218)
chr2 (113-226)||(24383329-24383442)
chr2 (62-281)||(34824057-34824277)
chr2 (67-179)||(3799131-3799242)
chr2 (70-179)||(8943466-8943574)
chr2 (61-158)||(28349790-28349887)
chr2 (62-281)||(28776235-28776455)
chr2 (64-168)||(23822251-23822355)
chr2 (64-168)||(23831330-23831434)
chr2 (61-156)||(21245307-21245402)
chr2 (61-159)||(43707372-43707464)
chr2 (61-159)||(24273362-24273460)
chr2 (62-281)||(11231766-11231986)
chr2 (62-179)||(24686313-24686429)
chr2 (62-162)||(22775717-22775817)
chr2 (62-162)||(22781095-22781195)
chr2 (62-179)||(22283565-22283681)
chr2 (62-179)||(22513717-22513833)
chr2 (62-179)||(22274332-22274448)
chr2 (210-278)||(19659645-19659714)
[»] scaffold0021 (2 HSPs)
scaffold0021 (26-226)||(147212-147412)
scaffold0021 (66-176)||(87752-87862)
[»] chr4 (43 HSPs)
chr4 (26-226)||(2584407-2584607)
chr4 (26-226)||(4830420-4830620)
chr4 (26-226)||(4833715-4833915)
chr4 (28-226)||(18230331-18230529)
chr4 (39-195)||(13447132-13447288)
chr4 (38-194)||(14931418-14931573)
chr4 (70-196)||(6512256-6512382)
chr4 (64-226)||(14280875-14281037)
chr4 (64-226)||(22354305-22354467)
chr4 (64-203)||(54798192-54798331)
chr4 (55-196)||(4615344-4615485)
chr4 (87-191)||(15368180-15368284)
chr4 (65-196)||(16224007-16224138)
chr4 (64-203)||(20899032-20899171)
chr4 (64-196)||(27028376-27028505)
chr4 (64-278)||(52266107-52266322)
chr4 (64-196)||(16157422-16157553)
chr4 (87-191)||(15403193-15403296)
chr4 (37-278)||(30233095-30233336)
chr4 (61-158)||(10705357-10705454)
chr4 (61-158)||(10919127-10919224)
chr4 (71-160)||(15214137-15214226)
chr4 (62-162)||(5683073-5683173)
chr4 (64-196)||(15373958-15374090)
chr4 (69-177)||(26921778-26921886)
chr4 (80-220)||(19622552-19622693)
chr4 (67-179)||(7132593-7132704)
chr4 (113-185)||(15371714-15371786)
chr4 (64-278)||(15851942-15852157)
chr4 (67-179)||(20000340-20000451)
chr4 (71-175)||(13043280-13043384)
chr4 (62-162)||(18293406-18293506)
chr4 (78-162)||(45314416-45314500)
chr4 (62-179)||(17375789-17375906)
chr4 (62-179)||(18168580-18168696)
chr4 (62-179)||(54363791-54363907)
chr4 (61-159)||(3337994-3338092)
chr4 (61-159)||(9870777-9870875)
chr4 (61-159)||(15990891-15990989)
chr4 (62-162)||(25119754-25119854)
chr4 (64-108)||(8574316-8574360)
chr4 (113-272)||(15272906-15273065)
chr4 (209-278)||(12837775-12837846)
[»] chr6 (46 HSPs)
chr6 (26-196)||(24267434-24267604)
chr6 (26-196)||(5110004-5110174)
chr6 (26-209)||(5289353-5289533)
chr6 (26-196)||(29415846-29416018)
chr6 (64-226)||(18259436-18259598)
chr6 (64-226)||(8226993-8227155)
chr6 (64-226)||(16448037-16448199)
chr6 (64-226)||(23532149-23532311)
chr6 (113-278)||(31467987-31468153)
chr6 (87-196)||(24441309-24441418)
chr6 (64-278)||(25650688-25650903)
chr6 (64-194)||(24563069-24563198)
chr6 (64-197)||(13750567-13750699)
chr6 (21-272)||(26089148-26089399)
chr6 (62-176)||(19174794-19174907)
chr6 (67-179)||(16231509-16231620)
chr6 (67-179)||(18087350-18087461)
chr6 (62-177)||(16135917-16136031)
chr6 (61-196)||(29847569-29847703)
chr6 (37-165)||(15735453-15735580)
chr6 (37-165)||(23994350-23994477)
chr6 (72-159)||(25753072-25753159)
chr6 (72-159)||(25755242-25755329)
chr6 (62-281)||(22226166-22226387)
chr6 (67-179)||(23977386-23977497)
chr6 (63-278)||(18776608-18776824)
chr6 (67-165)||(18003194-18003292)
chr6 (73-179)||(28948208-28948313)
chr6 (61-158)||(18659059-18659156)
chr6 (62-281)||(33314635-33314855)
chr6 (71-179)||(19983821-19983928)
chr6 (61-159)||(19443363-19443461)
chr6 (62-281)||(16376801-16377021)
chr6 (62-281)||(16384125-16384345)
chr6 (62-179)||(16556673-16556789)
chr6 (62-179)||(16633229-16633345)
chr6 (62-179)||(35015687-35015803)
chr6 (70-165)||(13621334-13621429)
chr6 (61-159)||(16132753-16132850)
chr6 (113-159)||(25348031-25348077)
chr6 (62-179)||(10488307-10488423)
chr6 (62-179)||(16649903-16650019)
chr6 (127-179)||(7366138-7366190)
chr6 (62-179)||(25904753-25904869)
chr6 (21-73)||(31468149-31468201)
chr6 (160-226)||(19102745-19102811)
[»] chr1 (28 HSPs)
chr1 (21-203)||(20058067-20058249)
chr1 (21-226)||(7320858-7321062)
chr1 (26-203)||(13527996-13528173)
chr1 (26-196)||(18270913-18271083)
chr1 (26-196)||(18275567-18275737)
chr1 (206-335)||(18853057-18853186)
chr1 (64-196)||(18824246-18824378)
chr1 (87-196)||(21473441-21473550)
chr1 (64-196)||(52983852-52983984)
chr1 (65-185)||(51476618-51476738)
chr1 (61-162)||(51324127-51324228)
chr1 (37-165)||(20825451-20825578)
chr1 (71-162)||(39060977-39061068)
chr1 (61-161)||(21239374-21239474)
chr1 (62-179)||(21858901-21859017)
chr1 (67-179)||(17148185-17148296)
chr1 (64-278)||(27330330-27330545)
chr1 (62-281)||(44035399-44035619)
chr1 (61-159)||(21659996-21660094)
chr1 (62-162)||(16656271-16656371)
chr1 (62-179)||(18060290-18060406)
chr1 (62-177)||(17004245-17004359)
chr1 (113-159)||(7791888-7791934)
chr1 (113-159)||(20030972-20031018)
chr1 (69-278)||(35054239-35054449)
chr1 (62-281)||(38055518-38055738)
chr1 (61-144)||(7791949-7792032)
chr1 (113-179)||(21650572-21650637)
[»] chr5 (33 HSPs)
chr5 (82-335)||(432105-432357)
chr5 (26-203)||(10817399-10817576)
chr5 (82-342)||(23981860-23982120)
chr5 (26-226)||(22357163-22357362)
chr5 (56-278)||(21297566-21297789)
chr5 (26-226)||(23539355-23539555)
chr5 (56-226)||(21311162-21311332)
chr5 (38-196)||(8952330-8952487)
chr5 (43-196)||(22777359-22777512)
chr5 (64-226)||(40726317-40726479)
chr5 (64-226)||(18318467-18318629)
chr5 (64-226)||(20765516-20765678)
chr5 (21-163)||(21405932-21406074)
chr5 (64-278)||(21109349-21109564)
chr5 (64-196)||(22007179-22007310)
chr5 (71-162)||(21399129-21399220)
chr5 (62-162)||(20197664-20197764)
chr5 (70-179)||(9730912-9731020)
chr5 (62-281)||(35581643-35581864)
chr5 (62-281)||(36990198-36990419)
chr5 (70-177)||(20711537-20711644)
chr5 (67-272)||(21204384-21204589)
chr5 (62-179)||(1220050-1220166)
chr5 (62-179)||(10778498-10778614)
chr5 (62-281)||(21932809-21933029)
chr5 (62-281)||(21938979-21939199)
chr5 (62-162)||(28901824-28901924)
chr5 (62-162)||(28938219-28938319)
chr5 (72-179)||(23514179-23514285)
chr5 (62-179)||(22883616-22883732)
chr5 (66-164)||(21650155-21650253)
chr5 (64-176)||(22111598-22111710)
chr5 (61-156)||(22470453-22470548)
[»] scaffold1276 (1 HSPs)
scaffold1276 (26-225)||(729-928)
[»] scaffold0117 (2 HSPs)
scaffold0117 (21-196)||(25717-25892)
scaffold0117 (64-220)||(40480-40636)
[»] chr8 (40 HSPs)
chr8 (26-196)||(17611580-17611750)
chr8 (64-185)||(23451097-23451218)
chr8 (64-226)||(26220177-26220339)
chr8 (66-185)||(34302177-34302296)
chr8 (64-226)||(26222546-26222708)
chr8 (73-181)||(24496237-24496345)
chr8 (64-185)||(3273513-3273634)
chr8 (93-196)||(24979771-24979874)
chr8 (63-272)||(20481056-20481266)
chr8 (64-197)||(22583948-22584081)
chr8 (64-177)||(30766220-30766333)
chr8 (62-215)||(39114725-39114878)
chr8 (62-179)||(17501798-17501914)
chr8 (59-156)||(22532466-22532563)
chr8 (59-156)||(22537151-22537248)
chr8 (64-197)||(23889431-23889563)
chr8 (62-158)||(4233514-4233610)
chr8 (67-179)||(13721456-13721567)
chr8 (62-281)||(271788-272009)
chr8 (62-281)||(829646-829867)
chr8 (62-281)||(13662692-13662912)
chr8 (67-179)||(16873579-16873690)
chr8 (66-177)||(273896-274007)
chr8 (66-177)||(641842-641953)
chr8 (66-177)||(827648-827759)
chr8 (67-165)||(16039581-16039679)
chr8 (70-272)||(24386337-24386539)
chr8 (61-157)||(39694611-39694707)
chr8 (77-179)||(24717395-24717496)
chr8 (70-179)||(3431810-3431918)
chr8 (62-281)||(22006688-22006908)
chr8 (61-158)||(39364396-39364493)
chr8 (71-167)||(23809455-23809551)
chr8 (62-179)||(15319690-15319807)
chr8 (62-179)||(15500059-15500176)
chr8 (61-159)||(32950525-32950624)
chr8 (61-159)||(44522508-44522606)
chr8 (62-179)||(643912-644028)
chr8 (64-151)||(24624430-24624517)
chr8 (62-203)||(24239270-24239412)
[»] scaffold1957 (1 HSPs)
scaffold1957 (21-203)||(99-273)
[»] scaffold0025 (1 HSPs)
scaffold0025 (26-281)||(146015-146272)
[»] scaffold0065 (1 HSPs)
scaffold0065 (206-342)||(68226-68362)
[»] scaffold0181 (1 HSPs)
scaffold0181 (55-203)||(25804-25952)
[»] scaffold0447 (4 HSPs)
scaffold0447 (21-278)||(3978-4237)
scaffold0447 (21-278)||(8592-8851)
scaffold0447 (61-159)||(7476-7574)
scaffold0447 (61-159)||(12090-12188)
[»] scaffold0383 (2 HSPs)
scaffold0383 (21-278)||(6586-6845)
scaffold0383 (61-159)||(10085-10183)
[»] scaffold0023 (2 HSPs)
scaffold0023 (82-335)||(61589-61841)
scaffold0023 (62-281)||(154434-154654)
[»] scaffold0018 (1 HSPs)
scaffold0018 (113-335)||(51538-51759)
[»] scaffold0273 (1 HSPs)
scaffold0273 (63-196)||(7304-7437)
[»] scaffold0720 (1 HSPs)
scaffold0720 (64-197)||(733-866)
[»] scaffold0149 (1 HSPs)
scaffold0149 (65-196)||(35833-35964)
[»] scaffold0234 (1 HSPs)
scaffold0234 (26-176)||(18080-18230)
[»] scaffold0303 (1 HSPs)
scaffold0303 (21-272)||(592-843)
[»] scaffold0342 (2 HSPs)
scaffold0342 (21-278)||(5352-5610)
scaffold0342 (62-281)||(876-1096)
[»] scaffold0377 (1 HSPs)
scaffold0377 (64-185)||(16405-16526)
[»] scaffold0962 (1 HSPs)
scaffold0962 (64-196)||(906-1038)
[»] scaffold0429 (1 HSPs)
scaffold0429 (38-226)||(2260-2447)
[»] scaffold0008 (1 HSPs)
scaffold0008 (64-220)||(72283-72439)
[»] scaffold0107 (2 HSPs)
scaffold0107 (64-190)||(3519-3645)
scaffold0107 (62-281)||(30917-31137)
[»] scaffold0244 (1 HSPs)
scaffold0244 (21-272)||(23096-23348)
[»] scaffold0017 (3 HSPs)
scaffold0017 (64-185)||(817-938)
scaffold0017 (64-166)||(7586-7688)
scaffold0017 (61-162)||(26364-26465)
[»] scaffold0706 (1 HSPs)
scaffold0706 (21-165)||(7238-7382)
[»] scaffold0174 (4 HSPs)
scaffold0174 (21-137)||(15991-16107)
scaffold0174 (134-226)||(19402-19494)
scaffold0174 (26-90)||(4944-5008)
scaffold0174 (28-90)||(11066-11128)
[»] scaffold0175 (1 HSPs)
scaffold0175 (64-203)||(18474-18613)
[»] scaffold0123 (2 HSPs)
scaffold0123 (37-196)||(1560-1717)
scaffold0123 (61-158)||(6898-6995)
[»] scaffold0022 (1 HSPs)
scaffold0022 (64-226)||(117054-117216)
[»] scaffold0037 (4 HSPs)
scaffold0037 (37-226)||(118066-118254)
scaffold0037 (67-226)||(113232-113391)
scaffold0037 (28-177)||(94393-94542)
scaffold0037 (66-124)||(25433-25491)
[»] scaffold0309 (2 HSPs)
scaffold0309 (64-196)||(8765-8896)
scaffold0309 (64-110)||(6613-6659)
[»] scaffold0371 (1 HSPs)
scaffold0371 (64-185)||(3503-3624)
[»] scaffold0331 (1 HSPs)
scaffold0331 (64-203)||(4333-4469)
[»] scaffold0003 (1 HSPs)
scaffold0003 (21-125)||(146982-147086)
[»] scaffold2046 (1 HSPs)
scaffold2046 (64-197)||(817-949)
[»] scaffold0490 (1 HSPs)
scaffold0490 (64-196)||(5510-5641)
[»] scaffold0247 (1 HSPs)
scaffold0247 (64-196)||(17541-17672)
[»] scaffold0453 (1 HSPs)
scaffold0453 (37-196)||(3716-3874)
[»] scaffold0077 (2 HSPs)
scaffold0077 (28-105)||(14741-14818)
scaffold0077 (113-281)||(16048-16217)
[»] scaffold0521 (1 HSPs)
scaffold0521 (62-226)||(8379-8543)
[»] scaffold0251 (1 HSPs)
scaffold0251 (37-272)||(13980-14214)
[»] scaffold0047 (1 HSPs)
scaffold0047 (37-182)||(76788-76932)
[»] scaffold0269 (1 HSPs)
scaffold0269 (62-281)||(16068-16288)
[»] scaffold0574 (1 HSPs)
scaffold0574 (37-165)||(10207-10334)
[»] scaffold0034 (3 HSPs)
scaffold0034 (71-281)||(79321-79532)
scaffold0034 (62-179)||(40134-40250)
scaffold0034 (62-179)||(45617-45733)
[»] scaffold0016 (1 HSPs)
scaffold0016 (62-179)||(166773-166890)
[»] scaffold0042 (1 HSPs)
scaffold0042 (61-156)||(51831-51926)
[»] scaffold0126 (1 HSPs)
scaffold0126 (61-159)||(6672-6770)
[»] scaffold0083 (3 HSPs)
scaffold0083 (61-162)||(11082-11184)
scaffold0083 (62-162)||(60-160)
scaffold0083 (62-162)||(5364-5464)
[»] scaffold0261 (1 HSPs)
scaffold0261 (64-177)||(6690-6803)
[»] scaffold0080 (2 HSPs)
scaffold0080 (61-162)||(29605-29706)
scaffold0080 (61-162)||(35070-35171)
[»] scaffold0825 (1 HSPs)
scaffold0825 (61-159)||(716-814)
[»] scaffold0125 (1 HSPs)
scaffold0125 (62-160)||(28173-28271)
[»] scaffold0184 (1 HSPs)
scaffold0184 (62-179)||(31810-31926)
[»] scaffold0113 (1 HSPs)
scaffold0113 (61-162)||(35113-35214)
[»] scaffold0078 (1 HSPs)
scaffold0078 (62-179)||(40918-41034)
[»] scaffold0039 (1 HSPs)
scaffold0039 (62-179)||(19589-19705)
[»] scaffold0597 (1 HSPs)
scaffold0597 (63-177)||(1666-1780)
[»] scaffold0686 (1 HSPs)
scaffold0686 (62-179)||(6613-6730)
[»] scaffold0256 (1 HSPs)
scaffold0256 (78-159)||(2175-2256)
[»] scaffold0106 (1 HSPs)
scaffold0106 (61-158)||(21606-21703)
[»] scaffold0076 (1 HSPs)
scaffold0076 (62-281)||(38711-38931)
[»] scaffold0103 (1 HSPs)
scaffold0103 (71-179)||(33125-33232)
[»] scaffold0456 (2 HSPs)
scaffold0456 (113-179)||(2060-2125)
scaffold0456 (113-179)||(9205-9270)
[»] scaffold0452 (1 HSPs)
scaffold0452 (62-215)||(3248-3401)
[»] scaffold0465 (1 HSPs)
scaffold0465 (66-177)||(10652-10763)
[»] scaffold0409 (2 HSPs)
scaffold0409 (62-179)||(1839-1954)
scaffold0409 (62-179)||(10094-10209)
[»] scaffold0205 (1 HSPs)
scaffold0205 (78-174)||(1543-1639)


Alignment Details
Target: chr7 (Bit Score: 145; Significance: 3e-76; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 26 - 226
Target Start/End: Original strand, 13256281 - 13256481
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||  ||||||||||| ||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  13256281 cgatttctgctcgacagacaacatcagattttctaattttcacgttttcgcgcgtaaaatctaaaccgttaacccgttttcgatgttgttttcgcctaca 13256380  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||  ||||| |||| |||| ||||    
T  13256381 cgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccaccaaaaaatcgatttccagaacctcacataatcacttatttgcaaa 13256480  T
Q  226 a 226  Q
    |    
T  13256481 a 13256481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 26 - 203
Target Start/End: Original strand, 37380469 - 37380647
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||  ||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||     
T  37380469 cgatttctgctcgacagacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcaatgtcgttttcgcctacg 37380568  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattc-aggtttcaaccacccaaatatcgatttccagaacct 203  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||  ||||||||||||||||    
T  37380569 cgctcctgacacttagctctatcataatctacagaaaaattcaagttttcaaccacccaaaactcgatttccagaacct 37380647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 38 - 203
Target Start/End: Complemental strand, 17467834 - 17467668
Alignment:
Q  38 gacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacac 137  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  17467834 gacagacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacac 17467735  T
Q  138 ttagctctatcataatctacagaaaaattc-aggtttcaaccacccaaatatcgatttccagaacct 203  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||  ||||||||||||||||    
T  17467734 ttagctctatcataatctacagaaaaattcaagttttcaaccacccaaaactcgatttccagaacct 17467668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 38 - 203
Target Start/End: Original strand, 17585380 - 17585546
Alignment:
Q  38 gacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacac 137  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  17585380 gacagacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacac 17585479  T
Q  138 ttagctctatcataatctacagaaaaattc-aggtttcaaccacccaaatatcgatttccagaacct 203  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||  ||||||||||||||||    
T  17585480 ttagctctatcataatctacagaaaaattcaagttttcaaccacccaaaactcgatttccagaacct 17585546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 21 - 278
Target Start/End: Complemental strand, 13866599 - 13866341
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| ||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||| ||||||||    
T  13866599 tagtccgatttctgcctgacagaccacatcagattttccaattttcacgttttcgcgcgtaaaaaccaaaccgttaaactgttttcgatgtcgttttcgc 13866500  T
Q  121 ctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattt 220  Q
    |||||||||||||||||||||||||||| |||  ||| |||||||||  | |||||| |||| ||  ||  |||||| | |||| || ||||||||||||    
T  13866499 ctacacgctcctgacacttagctctatcttaaagtaccgaaaaattccag-ttcaacaaccccaaattcattttccaaagccttacacaaacactcattt 13866401  T
Q  221 t--caaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaacgactc 278  Q
    |  ||||| |||| | ||| ||| |||||| ||||||||||| |||||||||||||||||    
T  13866400 ttccaaaacggttaacaattgaattttcacccgaaactctcgatttctcccaaacgactc 13866341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 3048995 - 3049154
Alignment:
Q  18 tcatagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgtttt 117  Q
    |||||| |||||||||| ||||||||||||| ||| |||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||  |||||    
T  3048995 tcatagcacgatttctgtctgacagacaacatcagattttccaattttcacgttttcgcgagtaaaaaccaaaccgttaacctgttttcgatgccgtttt 3049094  T
Q  118 cgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaac 177  Q
    ||||||||||||||||||||||||| ||||| |||| |||||||||||||| ||||||||    
T  3049095 cgcctacacgctcctgacacttagccctatcttaatgtacagaaaaattcaagtttcaac 3049154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 48274108 - 48274270
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||||  |||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  48274108 ttcacgttttcgcgcctaaaaaccaaaccattaacccgttttcgatgccgttttcgcctacgcgctcctgacacatagctctatcacaatctacagaaaa 48274207  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    ||||  |||||||||||||||| |||| |||||| |||||  ||||| ||||||||| |||||    
T  48274208 attccagtttcaaccacccaaaaatcggtttccaaaacctcacataatcactcatttgcaaaa 48274270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 54 - 226
Target Start/End: Complemental strand, 3289193 - 3289021
Alignment:
Q  54 ttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataat 153  Q
    ||||| || |||||| ||||||||| |||||||||||  |||||||| |||||||||  ||||| ||||||||| |||||||||||||||||||||||||    
T  3289193 ttttctaactttcacattttcgcgcataaaatccaaattgttaacccattttcgatgccgtttttgcctacacgttcctgacacttagctctatcataat 3289094  T
Q  154 ctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    |||||||||| |||| |||||||||||||||| |||||||| ||||||||  ||||| |||| |||| |||||    
T  3289093 ctacagaaaatttcaagtttcaaccacccaaaaatcgattttcagaacctcacataatcacttatttgcaaaa 3289021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 64 - 220
Target Start/End: Complemental strand, 19486389 - 19486233
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||| | ||||| |||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19486389 ttcacgttttcgctcataaaaaccaatccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctatagaaaa 19486290  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattt 220  Q
    ||||| |||| ||||||||||| |||| |||||| |||||  ||||| |||| ||||    
T  19486289 attcaagtttaaaccacccaaaaatcggtttccaaaacctcacataatcacttattt 19486233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 64 - 196
Target Start/End: Original strand, 4280750 - 4280881
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||  |||||||||||||||||| ||| || ||||||||||||||||||| |||||    
T  4280750 ttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatagctctatcataatctaccgaaaa 4280849  T
Q  164 attcaggtttcaaccacccaaatatcgatttcc 196  Q
    | | | |||||||| | ||||| ||||||||||    
T  4280850 actaaagtttcaacta-ccaaaaatcgatttcc 4280881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 68 - 196
Target Start/End: Complemental strand, 21734841 - 21734710
Alignment:
Q  68 cgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctac----agaaaa 163  Q
    ||||||| ||| ||||| |||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||||||||||||||||||    | ||||    
T  21734841 cgttttcacgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgagacttagctctatcataatctaccgaaaaaaaa 21734742  T
Q  164 attcaggtttcaaccacccaaatatcgatttcc 196  Q
    ||||| |||||||||| ||||| ||||||||||    
T  21734741 attcaagtttcaaccaaccaaa-atcgatttcc 21734710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 80 - 196
Target Start/End: Complemental strand, 21734269 - 21734151
Alignment:
Q  80 taaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctac---agaaaaattcaggtttcaa 176  Q
    ||||| |||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||||||||||||||||||   | ||||||||| |||||||    
T  21734269 taaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgagacttagctctatcataatctaccgaaaaaaaattcaagtttcaa 21734170  T
Q  177 ccacccaaatatcgatttcc 196  Q
    ||| ||||| ||||||||||    
T  21734169 ccaaccaaa-atcgatttcc 21734151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 37 - 185
Target Start/End: Original strand, 11054311 - 11054458
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgaca 136  Q
    |||||||||||| ||| ||||| ||  ||||||||||||||| |||||  ||||||||||| | ||||||||||  |||||| |||| | | ||||||||    
T  11054311 tgacagacaacatcagattttc-aaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctatatgttcctgaca 11054409  T
Q  137 cttagctctatcataatctacagaaaaattcaggtttcaaccacccaaa 185  Q
    |||||| |||||||||| || ||||||||||| ||||||||||||||||    
T  11054410 cttagccctatcataatatatagaaaaattcaagtttcaaccacccaaa 11054458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 28720332 - 28720423
Alignment:
Q  71 tttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaa 162  Q
    ||||||||||||||| ||||||||||| | | ||| ||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28720332 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcctgacacttggctctatcataatctacagaaa 28720423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 272
Target Start/End: Complemental strand, 42057117 - 42056883
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgaca 136  Q
    |||||||||||| ||| ||||| | || | |||||||||||| |||||  ||||||||||| ||||||||||||| |||||| |||||| |||||| |||    
T  42057117 tgacagacaacatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgtcgttttcacctacatgctcctaaca 42057019  T
Q  137 cttagctctatcataatctacagaaaaattcaggtttcaaccacc-caaatatcgatttccagaaccttgcataaacactcatttt-caaaatggttcat 234  Q
    |||||| ||||||||||  |||||||||| |  |||| ||| ||| ||||| ||  ||| || |||||  || ||||||||||||| ||||| |||| |     
T  42057018 cttagcactatcataatgcacagaaaaatcctagttttaacaacctcaaat-tcattttaca-aacctcacacaaacactcattttccaaaacggttaac 42056921  T
Q  235 aatcgaagtttcacacgaaactctcgttttctcccaaa 272  Q
    ||| ||| ||||| ||||||||| |||||||| |||||    
T  42056920 aattgaattttcaaacgaaactcccgttttcttccaaa 42056883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 67 - 179
Target Start/End: Original strand, 370704 - 370815
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||  ||||||||||| ||||||||||||  ||||||||||||| |||||| |||||| || ||||||||||||||| |||| ||    
T  370704 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatctaca-aaaattt 370802  T
Q  167 caggtttcaacca 179  Q
    || ||||||||||    
T  370803 catgtttcaacca 370815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 64 - 163
Target Start/End: Complemental strand, 10063304 - 10063205
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||  | ||||||||||||||||||||||  |||||| ||||| | |||||||||||||||||||||| |||||||| ||||    
T  10063304 ttcacgttttcgcgcctaaaaatcgaaccgttaacccgttttcgatgccgttttcacctacgcactcctgacacttagctctatcacaatctacataaaa 10063205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 61 - 196
Target Start/End: Complemental strand, 40554942 - 40554808
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacaga 160  Q
    ||||||||  |||||| |||||||| ||||||||||| | | ||| |||| ||||||||||||||| |||||||||||| |||||||||||||||||||     
T  40554942 attttcaccatttcgcacgtaaaattcaaaccgttaatcggattttgatgctgttttcgcctacactctcctgacacttggctctatcataatctacag- 40554844  T
Q  161 aaaattcaggtttcaaccacccaaatatcgatttcc 196  Q
      | |||| || |||||||||| || ||||||||||    
T  40554843 ctatttcaagtctcaaccaccccaaaatcgatttcc 40554808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 174
Target Start/End: Complemental strand, 37784781 - 37784671
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||| ||||||| | |||||  ||||||||||| | ||||||||||  |||||| |||||| | |||||||||||||| ||||||||||||||||||||    
T  37784781 ttcacattttcgctcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgacacttagccctatcataatctacagaaaa 37784682  T
Q  164 attcaggtttc 174  Q
    ||||| |||||    
T  37784681 attcaagtttc 37784671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 179
Target Start/End: Original strand, 13757987 - 13758098
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||  ||||||||||| ||||||||||||  ||||||||||||| |||||| |||||| || |||||||||| |||| |||| ||    
T  13757987 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatttaca-aaaattt 13758085  T
Q  167 caggtttcaacca 179  Q
    || ||||||||||    
T  13758086 catgtttcaacca 13758098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 14251537 - 14251426
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||  ||||||||||| ||||||||||||  ||||||||||||| |||||| |||||| || |||| |||||||||| |||| ||    
T  14251537 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactattataatctaca-aaaattt 14251439  T
Q  167 caggtttcaacca 179  Q
    || ||||||||||    
T  14251438 catgtttcaacca 14251426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 280
Target Start/End: Original strand, 16383369 - 16383588
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||||||| |||||| |||||| |||| | | ||| ||||| ||||||||||||||| |||| ||||| | ||||||||||||||||| ||    
T  16383369 ttttcaccatttcgcgcataaaattcaaaccattaatcggattttgatgtcgttttcgcctacacgttcctaacactaaactctatcataatctaca-aa 16383467  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || || | |||||||||| |||||| |||  |||||| |||||  ||||| |||| |||  | |||||| || |  |||||  ||||||||||||  | |    
T  16383468 aatttaaagtttcaaccatcccaaaaatcattttccaaaacctcacataatcacttattgacgaaaatgcttaaacatcgacatttcacacgaaaaaccc 16383567  T
Q  260 gttttctcccaaacgactcaa 280  Q
    |||||||||||||||||||||    
T  16383568 gttttctcccaaacgactcaa 16383588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 61 - 152
Target Start/End: Complemental strand, 8756574 - 8756483
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataa 152  Q
    ||||||||  ||||||||||||||| ||||||||||| | | ||| ||||| |||||||||||||| |||||||||||| ||||||||||||    
T  8756574 attttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacactctcctgacacttggctctatcataa 8756483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 2190974 - 2190876
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaat 165  Q
    |||||||||||| |||||  |||||||||||  |||||||||||  ||||||||||||| |||||| ||||||||| ||||||||||  ||||||||||    
T  2190974 acgttttcgcgcataaaaatcaaaccgttaattcgttttcgatgccgttttcgcctacatgctcctaacacttagcactatcataatgcacagaaaaat 2190876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 15951435 - 15951319
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||||| |||||||| ||||||||||| | | ||| ||||| |||||||||||||||||| ||||||||  ||||| ||||||||||| ||    
T  15951435 ttttcaccatttcgcacgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacacgctcttgacacttgactctaacataatctaca-aa 15951337  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  15951336 aatttcatgtttcaacca 15951319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 32494850 - 32494630
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||||||||||||||| ||||||||  ||||| ||||||||||| ||    
T  32494850 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcatgacacttgactctaacataatctaca-aa 32494752  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || | || |||||||||| ||||||  ||  |||||| |||||  |||||||||| |||  | |||  | || |  |||||  ||||||||||||  | |    
T  32494751 aattccatgtttcaaccatcccaaaagtcattttccaaaacctcacataaacacttattggcgaaagcgcttaaacatcgacatttcacacgaaaaaccc 32494652  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  32494651 gttttctcccaaacgactcaac 32494630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 3170836 - 3170734
Alignment:
Q  71 tttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcagg 170  Q
    ||||||||||||||| ||||| |||||  ||||||||||  |||||||||||||||| |||| | |||||||||||||| | |||||| ||||||||| |    
T  3170836 tttcgcgcgtaaaattcaaactgttaattcgttttcgattctgttttcgcctacacgttccttaaacttagctctatcacattctaca-aaaaattcatg 3170738  T
Q  171 tttc 174  Q
    ||||    
T  3170737 tttc 3170734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 59 - 158
Target Start/End: Complemental strand, 13699070 - 13698971
Alignment:
Q  59 caattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctaca 158  Q
    ||||||||||  ||||| ||||||||| |||||||||||   | ||| ||||  |||||||||||||| |||||||||||| || |||||||||||||||    
T  13699070 caattttcaccatttcgtgcgtaaaattcaaaccgttaattggattttgatgccgttttcgcctacactctcctgacacttggcgctatcataatctaca 13698971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 69 - 179
Target Start/End: Original strand, 15927186 - 15927296
Alignment:
Q  69 gttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttg-ttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattc 167  Q
    |||||||||| |||||  ||||||||||| ||||||||||||  | |||||||||||| |||||| | |||| || ||||||||||||||| |||| |||    
T  15927186 gttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgtttttcgcctacatgctcctaatacttggcactatcataatctaca-aaaatttc 15927284  T
Q  168 aggtttcaacca 179  Q
    | ||||||||||    
T  15927285 atgtttcaacca 15927296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 159
Target Start/End: Original strand, 13898098 - 13898196
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||||||||||||| | ||||||||| |   ||| ||||  |||||| ||||||| |||||||||||| |||||||||||||||||||    
T  13898098 attttcaccatttcgcgcgtaaaattccaaccgttaatcgaattttgatgccgttttctcctacactctcctgacacttggctctatcataatctacag 13898196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 177
Target Start/End: Complemental strand, 26071054 - 26070944
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||  ||||||||||| | ||||||||||   ||||| |||||  | || ||||||||||| ||||| |||| ||||||||||||    
T  26071054 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccattttcacctacgtgttcatgacacttagccctatcttaatgtacagaaaaatt 26070955  T
Q  167 caggtttcaac 177  Q
    || ||||||||    
T  26070954 caagtttcaac 26070944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 177
Target Start/End: Complemental strand, 26094841 - 26094731
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||  ||||||||||| | ||||||||||   ||||| |||||  | || ||||||||||| ||||| |||| ||||||||||||    
T  26094841 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccattttcacctacgtgttcatgacacttagccctatcttaatgtacagaaaaatt 26094742  T
Q  167 caggtttcaac 177  Q
    || ||||||||    
T  26094741 caagtttcaac 26094731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 27102285 - 27102065
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||| | |||||||||||  ||||| ||||||||| | ||    
T  27102285 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcctgacacttgactctaacataatctata-aa 27102187  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  | |    
T  27102186 aatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataatcacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 27102087  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  27102086 gttttctcccaaacgactcaac 27102065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 27109633 - 27109413
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||| | |||||||||||  ||||| ||||||||| | ||    
T  27109633 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcctgacacttgactctaacataatctata-aa 27109535  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  | |    
T  27109534 aatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataatcacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 27109435  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  27109434 gttttctcccaaacgactcaac 27109413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 29004694 - 29004791
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctaca 158  Q
    ||||||||  ||||||||| ||||| ||||||||||| | | ||| | ||  |||||||||||||||||||| |||||| |||||||| |||||||||    
T  29004694 attttcaccatttcgcgcgaaaaattcaaaccgttaatcggattttggtgccgttttcgcctacacgctcctaacactttgctctatcttaatctaca 29004791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 18980659 - 18980548
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| | |||  ||||||||||| || |||||||||  |||||| |||||| |||||| |||||| || ||||||||||||||| |||| ||    
T  18980659 acgttttcgcgcattaaaatcaaaccgttaatccattttcgatgcagttttcacctacatgctcctaacacttggcactatcataatctaca-aaaattt 18980561  T
Q  167 caggtttcaacca 179  Q
    || ||| ||||||    
T  18980560 catgttccaacca 18980548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 112066 - 111955
Alignment:
Q  66 cacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaat 165  Q
    ||||||||||||| ||| |  ||||||||||| |||||||| |||  |||||| |||||  | || ||||||||||| ||||| || | |||||||||||    
T  112066 cacgttttcgcgcataataatcaaaccgttaatccgttttcaatgccgttttcacctacgtgttcatgacacttagccctatcttagtgtacagaaaaat 111967  T
Q  166 tcaggtttcaac 177  Q
    ||| ||||||||    
T  111966 tcaagtttcaac 111955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 272
Target Start/End: Complemental strand, 15525364 - 15525159
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||  ||||||||||| |||||| | |||  |||||||||||||  ||||| ||||||||  ||||||||||  ||||||||||     
T  15525364 acgttttcgcgcataaaaatcaaaccgttaatccgtttgcaatgccgttttcgcctacattctcctaacacttagtactatcataatgcacagaaaaatc 15525265  T
Q  167 caggtttcaaccacc-caaatatcgatttccagaaccttgcataaacactcatttt-caaaatggttcataatcgaagtttcacacgaaactctcgtttt 264  Q
    |  |||||||| ||| ||||| ||  ||| || | |||  || ||||||||||||| ||||| |||| | ||  ||| ||||| ||||||||| ||||||    
T  15525264 ccagtttcaacaacctcaaat-tcattttaca-agcctcacacaaacactcattttccaaaacggttaacaaatgaattttcaaacgaaactcccgtttt 15525167  T
Q  265 ctcccaaa 272  Q
    ||||||||    
T  15525166 ctcccaaa 15525159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 177
Target Start/End: Original strand, 2028378 - 2028488
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||  ||||||||||| | ||||||||||  |||||| |||||  | |  ||||||||||| ||||| |||| |||||||||| |    
T  2028378 acgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacttgtttatgacacttagccctatcttaatgtacagaaaaagt 2028477  T
Q  167 caggtttcaac 177  Q
    || ||||||||    
T  2028478 caagtttcaac 2028488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 33001787 - 33001886
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacaga 160  Q
    ||||||||  ||||||||||||||| ||| ||||||| | | ||| ||||  |||||||||||||| ||||||||||   |||||||||||||||| |||    
T  33001787 attttcaccatttcgcgcgtaaaattcaagccgttaatcggattttgatgccgttttcgcctacactctcctgacac--ggctctatcataatctataga 33001884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 7822336 - 7822452
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||| | |||||||||||  ||||| ||||||||| | ||    
T  7822336 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcctgacacttgactctaacataatctata-aa 7822434  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  7822435 aatttcatgtttcaacca 7822452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 7829647 - 7829763
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||| | |||||||||||  ||||| ||||||||| | ||    
T  7829647 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcctgacacttgactctaacataatctata-aa 7829745  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  7829746 aatttcatgtttcaacca 7829763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 27176041 - 27176157
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||| | |||||||||||  ||||| ||||||||| | ||    
T  27176041 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcctgacacttgactctaacataatctata-aa 27176139  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  27176140 aatttcatgtttcaacca 27176157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 38784377 - 38784261
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||| | |||||||||||  ||||| ||||||||| | ||    
T  38784377 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcctgacacttgactctaacataatctata-aa 38784279  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  38784278 aatttcatgtttcaacca 38784261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 48744207 - 48744252
Alignment:
Q  113 gttttcgcctacacgctcctgacacttagctctatcataatctaca 158  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||    
T  48744207 gttttcgcctacacgctcctgacagttagctctatcttaatctaca 48744252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 3894492 - 3894591
Alignment:
Q  66 cacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaat 165  Q
    ||||||||||||| |||||  ||||||||||| ||||||||||||  |||||| |||||  |  | ||||| ||||| ||||| |||| |||||||||||    
T  3894492 cacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacgtgtccatgacatttagccctatcttaatgtacagaaaaat 3894591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 166
Target Start/End: Original strand, 25123885 - 25124013
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgaca 136  Q
    |||||||||||| ||| ||||| | || | |||||||||||| |||||  ||||||||||| |||||||||| |  |||||| |  ||| |||||| ||     
T  25123885 tgacagacaacatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatccgttttcgacgccgttttcactcacatgctcctaact 25123983  T
Q  137 cttagctctatcataatctacagaaaaatt 166  Q
    |||| | ||||||||||  |||||||||||    
T  25123984 cttaacactatcataatgcacagaaaaatt 25124013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 272
Target Start/End: Original strand, 25124043 - 25124107
Alignment:
Q  209 aaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaa 272  Q
    |||||||||||||| ||||||||| | ||| ||| ||||| |||||||||||||||||| |||||    
T  25124043 aaacactcattttccaaaatggttaacaattgaattttcaaacgaaactctcgttttcttccaaa 25124107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 141; Significance: 7e-74; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 26 - 226
Target Start/End: Original strand, 12536240 - 12536440
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12536240 cgatttctgcctgacagacaacatcagattttcaaattttcacgttttctcgcgtaaaatccaaaccgttaacccgttttcgatgtcgttttcgcctaca 12536339  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| || | ||||||||||||  ||||| |||| |||| ||||    
T  12536340 cgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccatccaaaaattggtttccagaacctcacataatcacttatttgcaaa 12536439  T
Q  226 a 226  Q
    |    
T  12536440 a 12536440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 21 - 226
Target Start/End: Original strand, 15517237 - 15517442
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||    
T  15517237 tagtccgatttctgcctgacagacaacatcagattttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgtttttgatgccgttttcgc 15517336  T
Q  121 ctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattt 220  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| |||||||| ||||||| ||| |||| || |||||  ||||| |||| ||||    
T  15517337 ctacacgctcctaactcttagctctatcataatctacagaaaaattcaagtttcaactacccaaaaatcaattttcaaaacctcacataatcacttattt 15517436  T
Q  221 tcaaaa 226  Q
     |||||    
T  15517437 gcaaaa 15517442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 26 - 226
Target Start/End: Complemental strand, 34851761 - 34851562
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||  ||||||||||| ||| ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||    
T  34851761 cgatttctgctcgacagacaacatcagattttctaattt-cacgttttcacgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctaca 34851663  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||  ||||| |||| |||| ||||    
T  34851662 cgctcctgacacttagctctatcataatctacagaaaaatttaagtttcaaccacccaaatatcgatttccaaaacctcacataatcacttatttgcaaa 34851563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 26 - 203
Target Start/End: Complemental strand, 17547930 - 17547753
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||  ||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  17547930 cgatttctgctcgacagacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccattttcgatgtcgttttcgcctaca 17547831  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaacct 203  Q
    |||||||||||||||||  |||||| ||||||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  17547830 cgctcctgacacttagccttatcattatctacagaaaaattcaagtttcaaccacccaaaaatcgatttccaaaacct 17547753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 38 - 209
Target Start/End: Complemental strand, 11850043 - 11849872
Alignment:
Q  38 gacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacac 137  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||   |||||||||||| |||| |||||||    
T  11850043 gacagacaacatcagattttctaattttcacgttttcgcgcgtaagatccaaaccgttaacccgttttcgataccgttttcgcctacgcgcttctgacac 11849944  T
Q  138 ttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcata 209  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||| |||||    
T  11849943 ttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaactcgatttccagaacctcgcata 11849872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 28 - 185
Target Start/End: Complemental strand, 23395474 - 23395317
Alignment:
Q  28 atttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacg 127  Q
    ||||||||  ||||||||||| ||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||    
T  23395474 atttctgctcgacagacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaactgttaacccgttttcgatgccgttttcgcctacacg 23395375  T
Q  128 ctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaa 185  Q
    ||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  23395374 ctcctgacacttagctctatcataatctacaaaaagattcaagtttcaaccacccaaa 23395317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 26 - 203
Target Start/End: Original strand, 20188314 - 20188493
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttcc-aattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctac 124  Q
    ||||||||||  ||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||    
T  20188314 cgatttctgctcgacagacaacatcagattttcctaattttcacgttttcgcgcgtaaaatccaaaccattaacccgttttcgatgccgttttcgcctac 20188413  T
Q  125 acgctcctgacacttagctctatcataatctacagaaaaattc-aggtttcaaccacccaaatatcgatttccagaacct 203  Q
     || ||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||  ||||||||||||||||    
T  20188414 gcgttcctgacacttagctctatcataatctacagaaaaattcaagttttcaaccaccccaaactcgatttccagaacct 20188493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 64 - 203
Target Start/End: Complemental strand, 29172275 - 29172136
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||| | |||||  ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29172275 ttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagctctatcataatctacagaaaa 29172176  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaacct 203  Q
    ||||| |||||||||||||||| ||||||||||| |||||    
T  29172175 attcaagtttcaaccacccaaaaatcgatttccaaaacct 29172136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 26 - 177
Target Start/End: Original strand, 38167327 - 38167478
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    |||||||| | |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||| ||||||    
T  38167327 cgatttctacttgacagacaacatcagattttccaattttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcacctaca 38167426  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaac 177  Q
    | ||||||||||||||| ||||| |||| |||||||||||||| ||||||||    
T  38167427 cactcctgacacttagccctatcttaatgtacagaaaaattcaagtttcaac 38167478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 64 - 220
Target Start/End: Complemental strand, 37641921 - 37641765
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||| | ||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37641921 ttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctatagaaaa 37641822  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattt 220  Q
    ||||| |||| ||||||||||| |||| |||||| |||||  ||||| |||| ||||    
T  37641821 attcaagtttaaaccacccaaaaatcggtttccaaaacctcacataatcacttattt 37641765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 64 - 220
Target Start/End: Original strand, 36167156 - 36167312
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||| ||||||||||||     
T  36167156 ttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacttagctctatcacaatctacagaaag 36167255  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattt 220  Q
    ||||  |||||||||||||||| |||| |||||| |||||  ||||| |||||||||    
T  36167256 attccagtttcaaccacccaaaaatcggtttccaaaacctcacataatcactcattt 36167312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 64 - 278
Target Start/End: Original strand, 8604463 - 8604678
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||  ||||||||||| | ||||||||||  |||||| |||||| | |||||||||||||| |||||||||| |||||||||    
T  8604463 ttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgacacttagccctatcataatgtacagaaaa 8604562  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcatttt-caaaatggttcataatcgaagtttcacacgaaactctcgtt 262  Q
    ||||| |||||||| |||| ||  ||  |||||| |||||| || ||||||||||||| ||||| |||| | ||| ||| ||||||||||||||| ||||    
T  8604563 attcaagtttcaacaaccccaaattcattttccaaaaccttacacaaacactcattttccaaaacggttaacaattgaattttcacacgaaactcccgtt 8604662  T
Q  263 ttctcccaaacgactc 278  Q
    |||||||||| |||||    
T  8604663 ttctcccaaatgactc 8604678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 22147183 - 22147021
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||| | ||||| |||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  22147183 ttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagccctatcataatctatagaaaa 22147084  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    ||||| |||| ||||||||||| |||| |||||| |||||  ||||| |||| |||| |||||    
T  22147083 attcaagtttaaaccacccaaaaatcggtttccaaaacctcacataatcacttatttgcaaaa 22147021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 13511691 - 13511812
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||||||  |||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  13511691 ttcacgttttcccgcataaaaaccaaaccgttaacccgttttcgatgccgttttctcctacacgctcctgaaacttagctctatcataatctacagaaaa 13511790  T
Q  164 attcaggtttcaaccacccaaa 185  Q
    ||||| ||||||||||||||||    
T  13511791 attcaagtttcaaccacccaaa 13511812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 21 - 177
Target Start/End: Original strand, 23491785 - 23491941
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||  |||||| |    
T  23491785 tagtccgatttctgcctgacagacaacatcagattttccaattttcacgttttcgcgcgtaaaaaccaaaccgttaatccgttttcggtgccgttttcac 23491884  T
Q  121 ctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaac 177  Q
    ||||  | || ||||||||||| ||||| |||| |||||||||||||| ||||||||    
T  23491885 ctacttgttcatgacacttagccctatcttaatgtacagaaaaattcaagtttcaac 23491941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 64 - 220
Target Start/End: Original strand, 21619007 - 21619163
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||  |||||||||||| ||||||||||||||| |||||||| |||||||||||||    
T  21619007 ttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacttaactctatcacaatctacagaaaa 21619106  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattt 220  Q
    |||   |||||||||||||||| |||| |||||| |||||  ||||| | |||||||    
T  21619107 attacagtttcaaccacccaaaaatcggtttccaaaacctcacataatccctcattt 21619163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 24340345 - 24340236
Alignment:
Q  87 caaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaat 186  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||||     
T  24340345 caaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagccctatcataatctacaaaaagattcaagtttcaaccacccaaaa 24340246  T
Q  187 atcgatttcc 196  Q
    ||||||||||    
T  24340245 atcgatttcc 24340236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 12158908 - 12159028
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||   |||||||||||||||| |||||||||| |||||||||||| |||||||||    
T  12158908 ttcacgttttcgcgcataaaaatcaaaccgttaacccgttttcgatgccattttcgcctacacgct-ctgacacttaactctatcataatttacagaaaa 12159006  T
Q  164 attcaggtttcaaccacccaaa 185  Q
    ||||| ||||||||||||||||    
T  12159007 attcaagtttcaaccacccaaa 12159028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 64 - 203
Target Start/End: Complemental strand, 52338376 - 52338237
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||| | |||||  ||||||||||||||||||||||||  ||||| ||||| || |||||||||||||||||||||||||||||||| |||    
T  52338376 ttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccgtttttgcctaaactctcctgacacttagctctatcataatctacaggaaa 52338277  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaacct 203  Q
    ||||| |||| |||| |||||| |||||| |||| |||||    
T  52338276 attcaagttttaaccgcccaaaaatcgatctccaaaacct 52338237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 10550929 - 10551091
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||   |||||||||| ||||||||||||  |||||||||||| ||||||| |||||||||||||||| ||| |||| ||||    
T  10550929 ttcacgttttcgcgcctaaaaataaaaccgttaatccgttttcgatgccgttttcgcctacgcgctcctaacacttagctctatcacaatatacaaaaaa 10551028  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    | ||  |||||||||||||||| |||| |||||| |||||  ||||| ||||||||| |||||    
T  10551029 aatccagtttcaaccacccaaaaatcggtttccaaaacctcacataatcactcatttgcaaaa 10551091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 64 - 194
Target Start/End: Complemental strand, 13968222 - 13968093
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||  |||||||||||||||||| ||| || ||||||||||||||||||| |||||    
T  13968222 ttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatagctctatcataatctaccgaaaa 13968123  T
Q  164 attcaggtttcaaccacccaaatatcgattt 194  Q
    | | | |||||||| | ||||| ||||||||    
T  13968122 actaaagtttcaacta-ccaaaaatcgattt 13968093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 64 - 194
Target Start/End: Complemental strand, 13973697 - 13973568
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||  |||||||||||||||||| ||| || ||||||||||||||||||| |||||    
T  13973697 ttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatagctctatcataatctaccgaaaa 13973598  T
Q  164 attcaggtttcaaccacccaaatatcgattt 194  Q
    | | | |||||||| | ||||| ||||||||    
T  13973597 actaaagtttcaacta-ccaaaaatcgattt 13973568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 13667459 - 13667362
Alignment:
Q  113 gttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataa 210  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| | ||| |||||||||||| ||| ||||||||||  ||||| ||||||    
T  13667459 gttttcgcctacacgctcctgacacttaactctatcataatctacagaaagactcaagtttcaaccacctaaaaatcgatttcccaaacctcgcataa 13667362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 37 - 272
Target Start/End: Original strand, 53770468 - 53770702
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgaca 136  Q
    |||||||||||| ||| ||||| | || | |||||||||||| |||||  ||||||||||| ||||||||||||  ||||||||||||| |||||| |||    
T  53770468 tgacagacaacatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaaca 53770566  T
Q  137 cttagctctatcataatctacagaaaaattcaggtttcaaccacc-caaatatcgatttccagaaccttgcataaacactcatttt-caaaatggttcat 234  Q
    |||||| ||||||||||  |||||||||| |  |||||||| ||| ||||| ||  ||| || |||||  || ||||||||||||| ||||| |||| |     
T  53770567 cttagcactatcataatgcacagaaaaatcccagtttcaacaacctcaaat-tcattttaca-aacctcacacaaacactcattttccaaaacggttaac 53770664  T
Q  235 aatcgaagtttcacacgaaactctcgttttctcccaaa 272  Q
    ||| ||| ||||| ||||||||| |||||||| |||||    
T  53770665 aattgaattttcaaacgaaactcccgttttcttccaaa 53770702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 50351248 - 50351148
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  50351248 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacacggtcctgacacttaactctatcataatctacagaa 50351149  T
Q  162 a 162  Q
    |    
T  50351148 a 50351148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 162
Target Start/End: Complemental strand, 9511346 - 9511245
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacaga 160  Q
    ||||||||  |||||||||||||||  |||||||||| | | ||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9511346 attttcaccatttcgcgcgtaaaattgaaaccgttaatcggattttgattccgttttcgcctacacgctcctgacacttagctctatcataatctacaga 9511247  T
Q  161 aa 162  Q
    ||    
T  9511246 aa 9511245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 162
Target Start/End: Complemental strand, 9519321 - 9519220
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacaga 160  Q
    ||||||||  |||||||||||||||  |||||||||| | | ||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9519321 attttcaccatttcgcgcgtaaaattgaaaccgttaatcggattttgattccgttttcgcctacacgctcctgacacttagctctatcataatctacaga 9519222  T
Q  161 aa 162  Q
    ||    
T  9519221 aa 9519220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 16820749 - 16820865
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||||||||||||||| | | ||| ||||| |||||||||||||||||| ||||||||  ||||| ||||||||||| ||    
T  16820749 ttttcaccatttcgcgcgtaaaatccaaaccgttaatcggattttgatgtcgttttcgcctacacgctcttgacacttgactctaacataatctaca-aa 16820847  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  16820848 aatttcatgtttcaacca 16820865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 64 - 196
Target Start/End: Original strand, 14818710 - 14818842
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||  ||||||||||| | ||||||||||   ||||| |||||| | |||||||||||||| |||||||||| |||| |||     
T  14818710 ttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccattttcacctacatgttcctgacacttagccctatcataatatacataaag 14818809  T
Q  164 attcaggtttcaaccacccaaatatcgatttcc 196  Q
    ||||| ||||||||||||| || ||| ||||||    
T  14818810 attcaagtttcaaccaccccaaaatctatttcc 14818842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 67 - 179
Target Start/End: Original strand, 18910610 - 18910721
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||  ||||||||||| ||||||||||||  ||||||||||||| |||||| |||||| || ||||||||||||||| |||| ||    
T  18910610 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatctaca-aaaattt 18910708  T
Q  167 caggtttcaacca 179  Q
    || ||||||||||    
T  18910709 catgtttcaacca 18910721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 59 - 159
Target Start/End: Original strand, 37038669 - 37038769
Alignment:
Q  59 caattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctaca 158  Q
    ||||||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||||||||||||||||||| |||| ||||||||||||||||||    
T  37038669 caattttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcctgaaacttggctctatcataatctaca 37038768  T
Q  159 g 159  Q
    |    
T  37038769 g 37038769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 65 - 185
Target Start/End: Complemental strand, 45531030 - 45530910
Alignment:
Q  65 tcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaa 164  Q
    |||||||||||| | |||||  ||||||||||| | |||||||||   |||||| |||||| | ||||||||||| || |||||||||||||||||||||    
T  45531030 tcacgttttcgctcataaaaatcaaaccgttaatctgttttcgataccgttttcacctacatgttcctgacacttggccctatcataatctacagaaaaa 45530931  T
Q  165 ttcaggtttcaaccacccaaa 185  Q
    |||| ||| ||||||||||||    
T  45530930 ttcaagttccaaccacccaaa 45530910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 64 - 278
Target Start/End: Complemental strand, 13327166 - 13326952
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||| | |||||  ||||||||||| | ||||||||||  |||||| |||||  | |||||||||||||  ||||||||||  | | ||||    
T  13327166 ttcacgttttcgcacataaaaatcaaaccgttaaactgttttcgatgccgttttcacctacttgttcctgacacttagacctatcataatgcataaaaaa 13327067  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctcgtt 262  Q
    ||||| |||| ||| |||| ||  ||  ||| || |||||  || |||||||||||||| ||||||||| | ||| ||| ||||||||||||||| | ||    
T  13327066 attcaagttttaacaaccccaaattcattttaca-aacctcacacaaacactcattttccaaaatggttaacaattgaattttcacacgaaactcccatt 13326968  T
Q  263 ttctcccaaacgactc 278  Q
    ||||||||||||||||    
T  13326967 ttctcccaaacgactc 13326952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 159
Target Start/End: Complemental strand, 3394181 - 3394083
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||||||||||||| |||||| |||| | | ||| ||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  3394181 attttcaccatttcgcgcgtaaaattcaaacccttaatcggattttgatgtcgttttcgcctacactctcctgacacttggctctatcataatctacag 3394083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 182
Target Start/End: Original strand, 17100106 - 17100224
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||  ||| ||||||| ||||||||||||  |||||| |||||  | || ||||||||||||||||| |||| |||||||||    
T  17100106 ttcacgttttcgcgcataaaaatcaatccgttaatccgttttcgatgccgttttcacctacgtgttcatgacacttagctctatcttaatgtacagaaaa 17100205  T
Q  164 attcaggtttcaaccaccc 182  Q
    ||||| |||||||| ||||    
T  17100206 attcaagtttcaacaaccc 17100224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 64 - 278
Target Start/End: Complemental strand, 11061802 - 11061587
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||  ||||||||||| ||||||||||    |||||| |||||| | || ||||||||||||||||| |||| |||||||||    
T  11061802 ttcacgttttcgcgcataaaaatcaaaccgttaatccgttttcgacaccgttttcacctacatgttcatgacacttagctctatcttaatgtacagaaaa 11061703  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcatttt--caaaatggttcataatcgaagtttcacacgaaactctcgt 261  Q
    ||||| | |||||| |||| ||  ||  |||||| | |||| || ||| | |||||||  ||||  |||| | ||| ||| |||||| |||||||| ||     
T  11061702 attcaag-ttcaacaaccccaaattcattttccaaagccttacacaaaaaatcatttttccaaagcggttaacaattgaattttcacccgaaactcccga 11061604  T
Q  262 tttctcccaaacgactc 278  Q
    |||||||||||||||||    
T  11061603 tttctcccaaacgactc 11061587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 17956630 - 17956530
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||| ||||||||| ||||||||||| | | ||| ||||| |||||||||||||||||||||||||||  ||||| ||||||||||||||    
T  17956630 ttttcaccatttcgtgcgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacacgctcctgacacttgcctctaacataatctacagaa 17956531  T
Q  162 a 162  Q
    |    
T  17956530 a 17956530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 28557657 - 28557757
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||||||||||||||||||||||||  ||||| ||||||||||||||    
T  28557657 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcctgacacttgactctaacataatctacagaa 28557756  T
Q  162 a 162  Q
    |    
T  28557757 a 28557757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 196
Target Start/End: Complemental strand, 52212818 - 52212722
Alignment:
Q  100 cgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttcc 196  Q
    |||||||||||  ||||||  ||||| | |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||| || ||||||||||    
T  52212818 cgttttcgatgccgttttcatctacatgttcctgacacttagccctatcataatctacagaaagattcaagtttcaaccaccccaaaatcgatttcc 52212722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 281
Target Start/End: Complemental strand, 54038917 - 54038706
Alignment:
Q  71 tttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcagg 170  Q
    ||||||||||||||| ||||||||||| | | ||| ||||  |||||||||||||||||||||||||||  ||||| ||||||||||| |||| | || |    
T  54038917 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcctgacacttgactctaacataatctaca-aaaattccatg 54038819  T
Q  171 tttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctcgttttctcc 268  Q
    ||||||||| |||||| |||  |||||| |||||   |||| |||| |||  | |||| | || |  |||||  ||||||||||||  | ||||||||||    
T  54038818 tttcaaccatcccaaaaatcattttccaaaacctcatataatcacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaacccgttttctcc 54038719  T
Q  269 caaacgactcaac 281  Q
    |||||||||||||    
T  54038718 caaacgactcaac 54038706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 61 - 159
Target Start/End: Complemental strand, 13025995 - 13025897
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||||||||||||| | ||||||||| | | ||| ||||  |||||||||||||| |||||||||||| |||||||||||||||||||    
T  13025995 attttcaccatttcgcgcgtaaaattccaaccgttaatcggattttgatgccgttttcgcctacactctcctgacacttggctctatcataatctacag 13025897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 61 - 159
Target Start/End: Complemental strand, 13029587 - 13029489
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||||||||||||| | ||||||||| | | ||| ||||  |||||||||||||| |||||||||||| |||||||||||||||||||    
T  13029587 attttcaccatttcgcgcgtaaaattccaaccgttaatcggattttgatgccgttttcgcctacactctcctgacacttggctctatcataatctacag 13029489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 61 - 159
Target Start/End: Complemental strand, 42324400 - 42324303
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||||||||||| |||||||||||| |||||||||||||||||||    
T  42324400 attttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgc-gttttcgcctacactctcctgacacttggctctatcataatctacag 42324303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 278
Target Start/End: Original strand, 54423440 - 54423682
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgaca 136  Q
    |||||||||||| ||| ||||| ||  ||||| ||||||||| |||||  | ||  ||||| ||||||||||||| |||||| |||||  | || |||||    
T  54423440 tgacagacaacaccagattttc-aaccttcacattttcgcgcataaaaatcgaattgttaatccgttttcgatgtcgttttcacctacgtgttcatgaca 54423538  T
Q  137 cttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcatttt---caaaatggttca 233  Q
    |||||| |||||  ||| |||||||||||||| |||||||| |||| ||  ||  |||||| | |||| ||  ||||||||||||   ||||| |||| |    
T  54423539 cttagccctatctgaatgtacagaaaaattcaagtttcaacaaccctaaattcattttccaaagccttaca-caacactcattttttccaaaacggttaa 54423637  T
Q  234 taatcgaagtttcacacgaaactctcgttttctcccaaacgactc 278  Q
     ||| ||| |||||| |||||| |||| |||||||||||||||||    
T  54423638 caattgaattttcacccgaaaccctcgatttctcccaaacgactc 54423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 158
Target Start/End: Complemental strand, 18366938 - 18366841
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctaca 158  Q
    ||||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||||||||||| || ||||||||| ||||||||||||||||||    
T  18366938 attttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacactcttctgacacttggctctatcataatctaca 18366841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 30206849 - 30206965
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| |||  ||||||||||||||||||||||||||||  ||||| |||||| ||||| |    
T  30206849 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatactgttttcgcctacacgctcctgacacttgactctaacataatttacag-a 30206947  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  30206948 aatttcatgtttcaacca 30206965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 40039541 - 40039441
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||||||| |||||| ||||||||||| |   ||| ||||  | ||||||| |||||||||||||||||||||||||||||||||||||||    
T  40039541 ttttcactatttcgcgcataaaattcaaaccgttaatcaaattttgatgccgctttcgcccacacgctcctgacacttagctctatcataatctacagaa 40039442  T
Q  162 a 162  Q
    |    
T  40039441 a 40039441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 37 - 272
Target Start/End: Original strand, 16260889 - 16261123
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgaca 136  Q
    |||||||||||| ||| ||||| | || | |||||||||||| |||||  |||| |||||| ||||||||||||   ||||| |||||| |||||| |||    
T  16260889 tgacagacaacatcagattttcaacttct-acgttttcgcgcataaaaatcaaatcgttaatccgttttcgatgccattttcacctacatgctcctaaca 16260987  T
Q  137 cttagctctatcataatctacagaaaaattcaggtttcaaccacc-caaatatcgatttccagaaccttgcataaacactcatttt-caaaatggttcat 234  Q
     ||||| ||||||||||  |||||||||| |  |||||||| ||| ||||| ||  ||| || |||||  || ||||||||||||| ||||| |||| |     
T  16260988 attagcactatcataatgcacagaaaaatcccagtttcaacaacctcaaat-tcattttaca-aacctcacacaaacactcattttccaaaacggttaac 16261085  T
Q  235 aatcgaagtttcacacgaaactctcgttttctcccaaa 272  Q
    ||  ||| ||||| ||||||||| ||||||||||||||    
T  16261086 aaatgaattttcaaacgaaactcccgttttctcccaaa 16261123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 17758830 - 17758759
Alignment:
Q  107 gatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaacca 179  Q
    |||| ||||||||||||||| ||||| |||||||||||||||||||||||||| ||| |||| ||||||||||    
T  17758830 gatgctgttttcgcctacacactcctaacacttagctctatcataatctacag-aaatttcaagtttcaacca 17758759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 19060150 - 19060079
Alignment:
Q  107 gatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaacca 179  Q
    |||| ||||||||||||||| ||||| |||||||||||||||||||||||||| ||| |||| ||||||||||    
T  19060150 gatgctgttttcgcctacacactcctaacacttagctctatcataatctacag-aaatttcaagtttcaacca 19060079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 272
Target Start/End: Complemental strand, 51961788 - 51961555
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgaca 136  Q
    |||||||||||| ||| ||||| | || | |||||||||||| |||||  ||||||||||| |||||||||| |  |||||| |  ||| |||||| ||     
T  51961788 tgacagacaacatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatccgttttcgacgccgttttcactcacatgctcctaact 51961690  T
Q  137 cttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcata 235  Q
    |||| | ||||||||||  |||||||||| |   ||||||| |||| ||| ||  ||| || |||||  || |||||||||||||| |||| |||| | |    
T  51961689 cttaacactatcataatgcacagaaaaatcccaatttcaacaaccccaat-tcattttaca-aacctcacacaaacactcattttccaaaacggttaaca 51961592  T
Q  236 atcgaagtttcacacgaaactctcgttttctcccaaa 272  Q
    || ||| ||||| ||||||||||||||||||||||||    
T  51961591 attgaattttcaaacgaaactctcgttttctcccaaa 51961555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 278
Target Start/End: Complemental strand, 11882844 - 11882630
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||  ||||||||||| | |||||| |||  |||||| |||||  | |||||||||||| | ||||||||||  ||||||||    
T  11882844 ttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcaatgccgttttcacctacttgttcctgacacttacccctatcataatgcacagaaaa 11882745  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcatttt-caaaatggttcataatcgaagtttcacacgaaactctcgtt 262  Q
    ||||| |||| ||| ||||  | ||  ||||    |||||  |  ||||||||||||| ||||| |||| | ||| ||| ||| ||||||||||| || |    
T  11882744 attcaagttttaacaacccccaaattcattttataaacctcactcaaacactcattttccaaaacggtt-acaattgaattttaacacgaaactcccgat 11882646  T
Q  263 ttctcccaaacgactc 278  Q
    ||||||||||||||||    
T  11882645 ttctcccaaacgactc 11882630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 71 - 154
Target Start/End: Original strand, 19430553 - 19430636
Alignment:
Q  71 tttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatc 154  Q
    ||||||||||||||| |||||||||||   ||||||||||  |||||||| |||||||||||| ||||||| |||||| |||||    
T  19430553 tttcgcgcgtaaaattcaaaccgttaatttgttttcgatgccgttttcgcgtacacgctcctgccacttagttctatcctaatc 19430636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 159
Target Start/End: Complemental strand, 178908 - 178810
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  |||||||| ||||||   ||||||||| | | ||| ||||  |||||||||||||| |||||||||||| |||||||||||||||||||    
T  178908 attttcaccatttcgcgcataaaatttcaaccgttaatcggattttgatgccgttttcgcctacactctcctgacacttggctctatcataatctacag 178810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 159
Target Start/End: Original strand, 17513452 - 17513550
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||||||||||||| | ||||||||| | | ||| | ||  ||||||||||||||||||||||||||| |||||||| |||| |||||    
T  17513452 attttcaccatttcgcgcgtaaaattccaaccgttaatcggattttggtgccgttttcgcctacacgctcctgacacttggctctatcttaatttacag 17513550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 1468387 - 1468167
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||| | |||||||||||  ||||| ||||||||| | ||    
T  1468387 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcctgacacttgactctaacataatctata-aa 1468289  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  | |    
T  1468288 aatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataatcacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 1468189  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  1468188 gttttctcccaaacgactcaac 1468167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 16934629 - 16934513
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||||||  |||||| ||||||||||| | | ||| || |  |||||||||||||||||||||||||||  ||||| ||||||||||| ||    
T  16934629 ttttcaccatttcgcgaataaaattcaaaccgttaatcggattttgacgccgttttcgcctacacgctcctgacacttgactctaacataatctaca-aa 16934531  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  16934530 aatttcatgtttcaacca 16934513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 12276422 - 12276517
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatcta 156  Q
    ||||||||  |||||||| ||| || ||||||||||| | | ||| ||||| ||||| |||||||| ||||| |||||| ||||||||||||||||    
T  12276422 attttcaccatttcgcgcataacattcaaaccgttaatcggattttgatgtcgtttttgcctacactctcctaacacttggctctatcataatcta 12276517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 49232045 - 49232161
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||| ||||||||||| ||||||||||| | | ||| ||||  |||||| |||||||| |||||||||||  ||||| ||||||||| | ||    
T  49232045 ttttcaccattttgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacacgatcctgacacttgactctaacataatctata-aa 49232143  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  49232144 aatttcatgtttcaacca 49232161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 176
Target Start/End: Original strand, 2843646 - 2843758
Alignment:
Q  63 tttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaa 162  Q
    |||| ||||||||||| |||||  |||||| |||| ||||||||||||  |||||| |||||  | || ||||||||| | ||||| |||| ||||| ||    
T  2843646 tttcgcgttttcgcgcataaaaatcaaaccattaatccgttttcgatgccgttttcacctacgtgttcatgacacttaaccctatcttaatgtacag-aa 2843744  T
Q  163 aattcaggtttcaa 176  Q
    |||||| |||||||    
T  2843745 aattcaagtttcaa 2843758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 20417784 - 20417862
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagc 142  Q
    ||||||||||||||| |||||  ||||| ||||| |  |||||||||  |||||| |||||| | ||||||||||||||    
T  20417784 ttcacgttttcgcgcataaaaatcaaactgttaatctattttcgatgccgttttcacctacatgttcctgacacttagc 20417862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 15045723 - 15045662
Alignment:
Q  113 gttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttc 174  Q
    |||||||||||| || |||| |||||||| ||| ||| | |||||||||||||||| |||||    
T  15045723 gttttcgcctacgcgttccttacacttagttctttcacattctacagaaaaattcatgtttc 15045662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 138; Significance: 4e-72; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 21 - 226
Target Start/End: Original strand, 75374 - 75579
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||    
T  75374 tagtccgatttctgcctgacagacaacatcagattttccaattttcacgttttcgcgcgtaaaatccaaactgttaacccgttttcgatgccgttttcgc 75473  T
Q  121 ctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattt 220  Q
    |||| ||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||| |||| ||||||||||||  ||||| |||| ||||    
T  75474 ctacgcgctcctgacatttagctctataataatctacagaaaaattcaagtttcaaccacccaaaaatcggtttccagaacctcacataatcacttattt 75573  T
Q  221 tcaaaa 226  Q
     |||||    
T  75574 gcaaaa 75579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 26 - 196
Target Start/End: Original strand, 60016 - 60186
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||  ||||||||||| ||| ||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||  |||||||||||||    
T  60016 cgatttctgctcgacagacaacatcagattttctaattttcacgttttcgcgagtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaca 60115  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttcc 196  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  60116 cgctcctgacacttagcactatcataatctacaaaaagattcaagtttcaaccacccaaaaatcgatttcc 60186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 21 - 226
Target Start/End: Original strand, 72524 - 72732
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| |||||||||||| ||| |||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||   ||||||||    
T  72524 tagtccgatttctgcctcacaaacaacatcagattttccaattttcacgttttcgcgcgtaaaatccaaactgttaacccgttttcaataccgttttcgc 72623  T
Q  121 ctacacgctcctgacacttagctctatcataatctacag---aaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactca 217  Q
    ||||||||||||||||||||||||||| |||||||||||   ||||| ||| |||||||||||||||| |||| ||||||||||||  ||||| |||| |    
T  72624 ctacacgctcctgacacttagctctataataatctacagaaaaaaaaatcaagtttcaaccacccaaaaatcggtttccagaacctcacataatcactta 72723  T
Q  218 ttttcaaaa 226  Q
    ||| |||||    
T  72724 tttgcaaaa 72732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 187691 - 187619
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatg 110  Q
    |||||||||||| ||| ||||||||||| |||||||||||| ||||||  ||||||||||| ||||||||||||    
T  187691 tgacagacaacaccagattttccaattt-cacgttttcgcgtgtaaaaatcaaaccgttaatccgttttcgatg 187619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 134; Significance: 1e-69; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 21 - 226
Target Start/End: Original strand, 22703559 - 22703764
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| ||||||||||  ||||||||||| ||| ||||| ||| ||||||||||||||||||||||||||| ||||||||| |||||||||  ||||||||    
T  22703559 tagtccgatttctgctcgacagacaacatcagattttctaatcttcacgttttcgcgcgtaaaatccaaatcgttaacccattttcgatgccgttttcgc 22703658  T
Q  121 ctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattt 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||  ||||| |||| ||||    
T  22703659 ctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaaatcgatttccagaacctcacataatcacttattt 22703758  T
Q  221 tcaaaa 226  Q
     |||||    
T  22703759 gcaaaa 22703764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 21 - 226
Target Start/End: Complemental strand, 24088036 - 24087831
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| |||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||    
T  24088036 tagtccgatttctgcctgacagacaacataagattttccaattttcacgttttcgcgcgtaaaatccaaatcgtcaacccgttttcgatgccgttttcgc 24087937  T
Q  121 ctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattt 220  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||| ||| ||||||| |||||  ||||| |||| ||||    
T  24087936 ctacacgctcctgacacttagctctatcataatctacagaaacattcaagtttcaactacccaaaaatctatttccaaaacctcacataatcacttattt 24087837  T
Q  221 tcaaaa 226  Q
     |||||    
T  24087836 gcaaaa 24087831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 26 - 203
Target Start/End: Complemental strand, 6477695 - 6477518
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||  |||| |||||| ||| ||||| || |||||||||||||||||||||||||||||||||||||| |||| ||||  |||||||||||||    
T  6477695 cgatttctgctcgacaaacaacatcagattttctaactttcacgttttcgcgcgtaaaatccaaaccgttaacccatttttgatgccgttttcgcctaca 6477596  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaacct 203  Q
    |||||||||||||||||  |||||| ||||||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  6477595 cgctcctgacacttagccttatcattatctacagaaaaattcaagtttcaaccacccaaaaatcgatttccaaaacct 6477518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 82 - 335
Target Start/End: Original strand, 33127684 - 33127936
Alignment:
Q  82 aaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacc 181  Q
    |||| ||||||||||| ||| ||| ||| | ||||||| |||| || |||| ||||||| ||||||| || || |||||||| |||| ||| |||||| |    
T  33127684 aaattcaaaccgttaatccgattttgatttcgttttcgtctacgcgttccttacacttaactctatcttattccacagaaaa-ttcatgttccaaccatc 33127782  T
Q  182 caaatatcgatttccagaaccttgcataaacactcattttcaaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaacgactcaac 281  Q
    | || |   ||| ||  |||||  |||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||    
T  33127783 ccaaaacaaattacccaaacctcacataaacacttattttcaaaatagttcacaatcgaagtttcacacgaaactctcgttttcttccaaaagactcaac 33127882  T
Q  282 aaccattttcttaacgtcaaaacaaaaaattcaatttgtctaactcacccaaaa 335  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  33127883 aaccattttcttaaagtcaaaacagaaaattcaatttgtctaactcacccaaaa 33127936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 32 - 203
Target Start/End: Complemental strand, 45618064 - 45617893
Alignment:
Q  32 ctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcc 131  Q
    |||||||||||| || | ||| |||||||||||||||||||||||||||||||||||||| ||||| | |||||||| |  |||||||||||||||||||    
T  45618064 ctgcctgacagataagatcagattttccaattttcacgttttcgcgcgtaaaatccaaactgttaatctgttttcgacgccgttttcgcctacacgctcc 45617965  T
Q  132 tgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaacct 203  Q
    ||  |||||| | || |||||||||  |||||||||| |||||| |||||| || |||||||||||||||||    
T  45617964 tggaacttagatataccataatctattgaaaaattcaagtttcacccaccctaaaatcgatttccagaacct 45617893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 65 - 185
Target Start/End: Original strand, 19358513 - 19358633
Alignment:
Q  65 tcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaa 164  Q
    |||||||||||| | |||||  ||||||||||| | |||||||||||||||||| |||||| | |||||||||||| |||||||||||| ||||||||||    
T  19358513 tcacgttttcgctcataaaaatcaaaccgttaatctgttttcgatgttgttttcacctacatgttcctgacacttaactctatcataatatacagaaaaa 19358612  T
Q  165 ttcaggtttcaaccacccaaa 185  Q
    |||| ||||||||||||||||    
T  19358613 ttcaagtttcaaccacccaaa 19358633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 62 - 165
Target Start/End: Original strand, 20273231 - 20273334
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||    
T  20273231 ttttcaccatttcgcgcgtaaaattcaaaccattaacccgttttcaatgttgttttcgcctacgcgctcctgacacttaactctatcataacctacagaa 20273330  T
Q  162 aaat 165  Q
    ||||    
T  20273331 aaat 20273334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 37 - 278
Target Start/End: Complemental strand, 9653712 - 9653472
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgaca 136  Q
    |||||||||||  ||| ||||||||||| |||||||||||||||||||  ||||||||||| ||||||||||||| |||||| |||||  | || |||||    
T  9653712 tgacagacaacgccagattttccaattt-cacgttttcgcgcgtaaaaatcaaaccgttaatccgttttcgatgtcgttttcacctacgtgttcatgaca 9653614  T
Q  137 cttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcatttt-caaaatggttcata 235  Q
    ||||| |||||| |||| || ||||||||||| |||||||| |||| ||  ||  |||| | | |||| ||  |||||||||||| ||||| |||| | |    
T  9653613 cttagttctatcttaatgtatagaaaaattcaagtttcaacaaccccaaattcattttcaaaagccttaca-caacactcattttccaaaacggttaaca 9653515  T
Q  236 atcgaagtttcacacgaaactctcgttttctcccaaacgactc 278  Q
    |  ||| |||||| |||||||| ||||||| ||||||||||||    
T  9653514 aatgaattttcacccgaaactcccgttttcccccaaacgactc 9653472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 64 - 194
Target Start/End: Complemental strand, 27366973 - 27366844
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||  |||||||||||||||||| ||| || ||||||||||||||||||| |||||    
T  27366973 ttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatagctctatcataatctaccgaaaa 27366874  T
Q  164 attcaggtttcaaccacccaaatatcgattt 194  Q
    | | | |||||||| | ||||| ||||||||    
T  27366873 actaaagtttcaacta-ccaaaaatcgattt 27366844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 71 - 179
Target Start/End: Original strand, 34877461 - 34877569
Alignment:
Q  71 tttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcagg 170  Q
    ||||||||||||||| |||||| |||| | ||||||||||  ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||| |    
T  34877461 tttcgcgcgtaaaattcaaaccattaatctgttttcgatgccgttttcgccaacacgctcctgacacttagctctatcatattctacagagaaattcaag 34877560  T
Q  171 tttcaacca 179  Q
    |||||||||    
T  34877561 tttcaacca 34877569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 37 - 168
Target Start/End: Original strand, 19659475 - 19659605
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgaca 136  Q
    |||||||||||| ||| ||||| || || ||||||||||||| |||||  ||||||||||| | ||||||||||  |||||| |||||| | ||||||||    
T  19659475 tgacagacaacatcagattttcaaactt-cacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgaca 19659573  T
Q  137 cttagctctatcataatctacagaaaaattca 168  Q
    |||||| |||||||||| ||||||||||||||    
T  19659574 cttagccctatcataatgtacagaaaaattca 19659605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 16935047 - 16935147
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||||||| |||||| ||||||||||| | | ||| || |  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16935047 ttttcaccatttcgcgcataaaattcaaaccgttaatcggattttgacgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 16935146  T
Q  162 a 162  Q
    |    
T  16935147 a 16935147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 17005707 - 17005807
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||||||| |||||| ||||||||||| | | ||| || |  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17005707 ttttcaccatttcgcgcataaaattcaaaccgttaatcggattttgacgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 17005806  T
Q  162 a 162  Q
    |    
T  17005807 a 17005807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 66 - 179
Target Start/End: Complemental strand, 42178601 - 42178489
Alignment:
Q  66 cacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaat 165  Q
    ||||||||||||| |||||  ||||||||||| ||||||||||||  ||||||||||||| |||||| |||||| || ||||||||||||||| | || |    
T  42178601 cacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatctaca-agaatt 42178503  T
Q  166 tcaggtttcaacca 179  Q
    ||| ||||||||||    
T  42178502 tcatgtttcaacca 42178489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 12642281 - 12642170
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||  ||||||||||| ||||||||||||  ||||||||||||| |||||| |||||| || |||||||||| |||| |||| ||    
T  12642281 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatttaca-aaaattt 12642183  T
Q  167 caggtttcaacca 179  Q
    || ||||||||||    
T  12642182 catgtttcaacca 12642170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 272
Target Start/End: Complemental strand, 21274875 - 21274641
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgaca 136  Q
    |||||||||||| ||| ||||| | || | |||||||||||| |||||  ||||||||||| || |||||||||  ||||||||||||| |||||| |||    
T  21274875 tgacagacaacatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatccattttcgatgccgttttcgcctacatgctcctaaca 21274777  T
Q  137 cttagctctatcataatctacagaaaaat-tcaggtttcaaccacc-caaatatcgatttccagaaccttgcataaacactcatttt-caaaatggttca 233  Q
    |||||| |||||| |||  |||||||||| ||| |||||||| ||| ||||| ||  ||| || |||||  || ||||||| ||||| ||||| |||| |    
T  21274776 cttagcactatcacaatgcacagaaaaatctca-gtttcaacaacctcaaat-tcattttaca-aacctcacacaaacacttattttccaaaacggttaa 21274680  T
Q  234 taatcgaagtttcacacgaaactctcgttttctcccaaa 272  Q
     ||  ||| ||||||||||||||| ||||||||||||||    
T  21274679 caaatgaattttcacacgaaactcccgttttctcccaaa 21274641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 67 - 278
Target Start/End: Complemental strand, 36891474 - 36891263
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||  ||||||||||| || |||||||||  |||||| |||||  | || ||||||||||| ||||| |||| ||||||||||||    
T  36891474 acgttttcgcgcataaaactcaaaccgttaatccattttcgatgccgttttcacctacgtgttcatgacacttagccctatcttaatgtacagaaaaatt 36891375  T
Q  167 caggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcatttt--caaaatggttcataatcgaagtttcacacgaaactctcgtttt 264  Q
    || |||||||| |||| ||| ||  ||||||   |||| ||  ||||||||||||  ||||| |||| | ||| ||| |||||| |||||| || | |||    
T  36891374 caagtttcaacaaccccaatttcattttccaaggccttaca-caacactcatttttccaaaacggttaacaattgaattttcacccgaaaccct-gattt 36891277  T
Q  265 ctcccaaacgactc 278  Q
    ||||||||||||||    
T  36891276 ctcccaaacgactc 36891263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 179
Target Start/End: Complemental strand, 12636504 - 12636396
Alignment:
Q  70 ttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcag 169  Q
    ||||||||| |||||  ||||||||||| ||||||||||||  |||| |||||||| |||||| |||||| || ||||||||||||||| |||| ||||     
T  12636504 ttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgtttccgcctacatgctcctaacacttggcactatcataatctaca-aaaatttcat 12636406  T
Q  170 gtttcaacca 179  Q
    ||||||||||    
T  12636405 gtttcaacca 12636396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 281
Target Start/End: Original strand, 12727998 - 12728218
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||||||||||||||||||||||||  ||||| ||| ||||||| ||    
T  12727998 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcctgacacttgactctaacatgatctaca-aa 12728096  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||| ||||| ||||||  ||  |||||| |||||  ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  | |    
T  12728097 aatttcatgttttaaccatcccaaaagtcattttccaaaacctcacataatcacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 12728196  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  12728197 gttttctcccaaacgactcaac 12728218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 226
Target Start/End: Original strand, 24383329 - 24383442
Alignment:
Q  113 gttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaac 212  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||| ||||||| |||||||| | || || ||   ||||||||||||  ||||| |    
T  24383329 gttttcgcctacacgctcctaacacttagctctatcatattctacagagaaattcaagtttcaactatcccaaaataattttccagaacctcacataatc 24383428  T
Q  213 actcattttcaaaa 226  Q
    ||| |||| |||||    
T  24383429 acttatttgcaaaa 24383442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 281
Target Start/End: Original strand, 34824057 - 34824277
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| |||||||||||   | ||| ||||  |||||||||||||||||||||||||||  ||||| ||||||||| | ||    
T  34824057 ttttcaccatttcgcgcgtaaaattcaaaccgttaattggattttgatgccgttttcgcctacacgctcctgacacttgactctaacataatctata-aa 34824155  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||| ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  | |    
T  34824156 aatttcatgtttcaaccatcccaaaagtcattttccaaaaccttacataatcacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 34824255  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||| ||||||||    
T  34824256 gttttctcccaaaggactcaac 34824277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 3799242 - 3799131
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||  ||||||||||| ||||||||||||  ||||||||||||| |||||| |||||| || |||||||| | |||| |||| ||    
T  3799242 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcatattttaca-aaaattt 3799144  T
Q  167 caggtttcaacca 179  Q
    || ||||||||||    
T  3799143 catgtttcaacca 3799131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 179
Target Start/End: Original strand, 8943466 - 8943574
Alignment:
Q  70 ttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcag 169  Q
    ||||||||| |||||  ||||||||||  || |||||||||| |||| |||||||| |||||| |||||| || ||||||||||||||| |||| ||||     
T  8943466 ttttcgcgcataaaaatcaaaccgttactccattttcgatgtcgtttccgcctacatgctcctaacacttggcactatcataatctaca-aaaatttcat 8943564  T
Q  170 gtttcaacca 179  Q
    ||||||||||    
T  8943565 gtttcaacca 8943574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 28349790 - 28349887
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctaca 158  Q
    ||||||||  |||||||| |||||| | ||||||||| | | ||| ||||  |||||||||||||| |||||||||||| ||||||||||||||||||    
T  28349790 attttcaccatttcgcgcataaaattccaaccgttaatcggattttgatgccgttttcgcctacactctcctgacacttggctctatcataatctaca 28349887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 28776455 - 28776235
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||||| |||||||||||  ||||| ||||||||| | ||    
T  28776455 ttttcactatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacacgatcctgacacttgactctaacataatctata-aa 28776357  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  | |    
T  28776356 aatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataatcacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 28776257  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  28776256 gttttctcccaaacgactcaac 28776235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 23822355 - 23822251
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    |||||||||||| || ||| |  ||||||||||| ||||||||||||  |||||| |||||| | || ||||||||||| ||||| |||| |||||||||    
T  23822355 ttcacgttttcgagcataacaatcaaaccgttaatccgttttcgatgccgttttcacctacatgttcatgacacttagccctatcttaatgtacagaaaa 23822256  T
Q  164 attca 168  Q
    |||||    
T  23822255 attca 23822251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 23831434 - 23831330
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    |||||||||||| || ||| |  ||||||||||| ||||||||||||  |||||| |||||| | || ||||||||||| ||||| |||| |||||||||    
T  23831434 ttcacgttttcgagcataacaatcaaaccgttaatccgttttcgatgccgttttcacctacatgttcatgacacttagccctatcttaatgtacagaaaa 23831335  T
Q  164 attca 168  Q
    |||||    
T  23831334 attca 23831330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 21245307 - 21245402
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatcta 156  Q
    ||||||||  ||||||||||||||| | ||||||||| | | ||| | ||  |||||||||||||| |||||||||||| ||||||||||||||||    
T  21245307 attttcaccatttcgcgcgtaaaattccaaccgttaatcggattttggtgccgttttcgcctacactctcctgacacttggctctatcataatcta 21245402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 61 - 159
Target Start/End: Complemental strand, 43707464 - 43707372
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||||||||||||| |||||||||||      || ||||| ||||||||||||||||| ||||||||| |||||||| ||||||||||    
T  43707464 attttcaccatttcgcgcgtaaaattcaaaccgttaa------tttgatgtcgttttcgcctacacgcttctgacacttggctctatcttaatctacag 43707372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 159
Target Start/End: Complemental strand, 24273460 - 24273362
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||| ||||||||| | ||||||||| | | ||| ||||  |||||||||||||| || ||||||||| |||||||||||||||||||    
T  24273460 attttcaccatttcgtgcgtaaaattccaaccgttaatcggattttgatgccgttttcgcctacactcttctgacacttggctctatcataatctacag 24273362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 11231986 - 11231766
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||| | |||||||||||  ||||| ||||||||| | ||    
T  11231986 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcctgacacttgactctaacataatctata-aa 11231888  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  | |    
T  11231887 aatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataatcacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 11231788  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  11231787 gttttctcccaaacgactcaac 11231766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 24686429 - 24686313
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||||| |||||||||||  ||||| ||||||||| | ||    
T  24686429 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacacgatcctgacacttgactctaacataatctata-aa 24686331  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  24686330 aatttcatgtttcaacca 24686313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 22775817 - 22775717
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||| ||| |||||| |||| |   ||| ||||  |||||||||||||||||||||||||||| |||||  |||||||||||||    
T  22775817 ttttcaccatttcgcgcgtataattcaaaccattaatcgaattttgatgccgttttcgcctacacgctcctgacacttaactctaagataatctacagaa 22775718  T
Q  162 a 162  Q
    |    
T  22775717 a 22775717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 22781195 - 22781095
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||| ||| |||||| |||| |   ||| ||||  |||||||||||||||||||||||||||| |||||  |||||||||||||    
T  22781195 ttttcaccatttcgcgcgtataattcaaaccattaatcgaattttgatgccgttttcgcctacacgctcctgacacttaactctaagataatctacagaa 22781096  T
Q  162 a 162  Q
    |    
T  22781095 a 22781095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 22283565 - 22283681
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||||||||||||||  |||||||||| | | ||| ||||  ||||||||||| ||||||| |||||||  ||||| ||||||||||| ||    
T  22283565 ttttcaccatttcgcgcgtaaaatttaaaccgttaatcggattttgatgccgttttcgcctatacgctccggacacttgactctaacataatctaca-aa 22283663  T
Q  162 aaattcaggtttcaacca 179  Q
    |  |||| ||||||||||    
T  22283664 agtttcatgtttcaacca 22283681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 22513833 - 22513717
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||| | |||||||||||  ||||| ||||||||| | ||    
T  22513833 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcctgacacttgactctaacataatctata-aa 22513735  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  22513734 aatttcatgtttcaacca 22513717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 22274332 - 22274448
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||| |||||||||| ||||||||||| | | ||| |||| |||||||||||| ||||||| ||| |||  || || ||||||||||| ||    
T  22274332 ttttcaccatttcacgcgtaaaattcaaaccgttaatcggattttgatgctgttttcgcctatacgctccggacccttgactgtaacataatctaca-aa 22274430  T
Q  162 aaattcaggtttcaacca 179  Q
    |  |||| ||||||||||    
T  22274431 agtttcatgtttcaacca 22274448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 278
Target Start/End: Original strand, 19659645 - 19659714
Alignment:
Q  210 aacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaacgactc 278  Q
    ||||||||||||| |||| |||| | |||  || ||||||||||||||| || |||||||||||||||||    
T  19659645 aacactcattttccaaaacggttaacaattcaattttcacacgaaactcccgatttctcccaaacgactc 19659714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 133; Significance: 4e-69; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 26 - 226
Target Start/End: Original strand, 147212 - 147412
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||  ||||||||||| ||| ||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||    
T  147212 cgatttctgctcgacagacaacatcagattttctaatcttcacgttttcgcgcataaaatccaaaccgttaacccgttttcgatgccgttttcgcctaca 147311  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||  ||||| |||| |||| ||||    
T  147312 cgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaacaatcgatttccagaacctcacataatcacttatttgcaaa 147411  T
Q  226 a 226  Q
    |    
T  147412 a 147412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 66 - 176
Target Start/End: Original strand, 87752 - 87862
Alignment:
Q  66 cacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaat 165  Q
    ||||||||||||| |||||  ||||||||||| ||||||||||||  |||||| |||||  | || ||||||||||| ||||| |||| |||||||||||    
T  87752 cacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacgtgttcatgacacttagccctatcttaatgtacagaaaaat 87851  T
Q  166 tcaggtttcaa 176  Q
    ||| |||||||    
T  87852 tcaagtttcaa 87862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 4e-69; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 26 - 226
Target Start/End: Complemental strand, 2584607 - 2584407
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||  ||| ||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||  |||||||||||||    
T  2584607 cgatttctgctcgactgacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccatttacgatgccgttttcgcctaca 2584508  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||  ||||| |||| |||| ||||    
T  2584507 cgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaaatcgatttccagaacctcacataatcacttatttgcaaa 2584408  T
Q  226 a 226  Q
    |    
T  2584407 a 2584407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 26 - 226
Target Start/End: Complemental strand, 4830620 - 4830420
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||  ||||||||||| ||| ||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||    
T  4830620 cgatttctgctcgacagacaacatcagattttctaatcttcacgttttcgcgcataaaatccaaaccgttaacccgttttcgatgccgttttcgcctaca 4830521  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||  ||||| |||| |||| ||||    
T  4830520 cgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaaattgatttccagaacctcacataatcacttatttgcaaa 4830421  T
Q  226 a 226  Q
    |    
T  4830420 a 4830420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 26 - 226
Target Start/End: Complemental strand, 4833915 - 4833715
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||  ||||||||||| ||| ||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||    
T  4833915 cgatttctgctcgacagacaacatcagattttctaatcttcacgttttcgcgcataaaatccaaaccgttaacccgttttcgatgccgttttcgcctaca 4833816  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||  ||||| |||| |||| ||||    
T  4833815 cgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaaattgatttccagaacctcacataatcacttatttgcaaa 4833716  T
Q  226 a 226  Q
    |    
T  4833715 a 4833715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 28 - 226
Target Start/End: Original strand, 18230331 - 18230529
Alignment:
Q  28 atttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacg 127  Q
    ||||||||  ||||||||||| ||| ||||  ||||||||||||||||| | ||||||||||  |||||||||||||||||||| ||||||||||| |||    
T  18230331 atttctgctcgacagacaacatcagattttttaattttcacgttttcgcacttaaaatccaatgcgttaacccgttttcgatgtcgttttcgcctaaacg 18230430  T
Q  128 ctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||| |||||||||||||  ||||| |||| |||| |||||    
T  18230431 ctcctgacacttagctctatcgtaatctacagaaaaattcaagtttcaaccacccaaaaatcaatttccagaacctcacataatcacttatttgcaaaa 18230529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 39 - 195
Target Start/End: Original strand, 13447132 - 13447288
Alignment:
Q  39 acagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacact 138  Q
    |||||||||| ||| ||||| |||||||||||||||||||||||||||||||| |||||||| |||| ||||  ||||||||||||||||||||||||||    
T  13447132 acagacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaactgttaacccatttttgatgccgttttcgcctacacgctcctgacact 13447231  T
Q  139 tagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttc 195  Q
    || ||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  13447232 tatctctatcataatctacagaaaaattcaagtttcaaccacccaaaaatcgatttc 13447288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 38 - 194
Target Start/End: Complemental strand, 14931573 - 14931418
Alignment:
Q  38 gacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacac 137  Q
    ||||||||||| ||| ||| ||||  ||||||||||| ||||||||| |||||||||||||||||||| ||||  |||||||||||| ||||||||||||    
T  14931573 gacagacaacatcagattt-ccaaccttcacgttttcacgcgtaaaaaccaaaccgttaacccgtttttgatgccgttttcgcctacccgctcctgacac 14931475  T
Q  138 ttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgattt 194  Q
    || |||||||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  14931474 ttggctctatcataatctatagaaaaattcaagtttcaaccacccaaaaatcgattt 14931418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 70 - 196
Target Start/End: Original strand, 6512256 - 6512382
Alignment:
Q  70 ttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcag 169  Q
    ||||| |||||| ||||||||||||||||||||||||||||  ||||||||||| | |||||||| |||||||||||||||||||||||||||||||||     
T  6512256 ttttcacgcgtagaatccaaaccgttaacccgttttcgatgccgttttcgcctatatgctcctgaaacttagctctatcataatctacagaaaaattcaa 6512355  T
Q  170 gtttcaaccacccaaatatcgatttcc 196  Q
    |||||||||||||||| ||||||||||    
T  6512356 gtttcaaccacccaaaaatcgatttcc 6512382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 14280875 - 14281037
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||  |||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  14280875 ttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacatagctctatcacaatctacagaaaa 14280974  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    |||   |||||||||||||||| |||| |||||| |||||  ||||| ||||||||| |||||    
T  14280975 atttcagtttcaaccacccaaaaatcggtttccaaaacctcacataatcactcatttgcaaaa 14281037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 22354305 - 22354467
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||| | ||||| |||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  22354305 ttcacgttttcgctcttaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagccctatcataatctatagaaaa 22354404  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    ||||| |||| ||||||||||| |||| |||||| |||||  ||||| |||| |||| |||||    
T  22354405 attcaagtttaaaccacccaaaaatcggtttccaaaacctcacataatcacttatttgcaaaa 22354467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 64 - 203
Target Start/End: Complemental strand, 54798331 - 54798192
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||  |||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  54798331 ttcacgttttcgcgcctaaaaaacaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacatagctctatcacaatctacagaaaa 54798232  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaacct 203  Q
    ||||  |||||||||||||||| |||| |||||| |||||    
T  54798231 attccagtttcaaccacccaaaaatcggtttccaaaacct 54798192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 4615485 - 4615344
Alignment:
Q  55 tttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatc 154  Q
    |||||||  ||||||||||||||| ||||| ||||||||||||| ||| |||||||  |||||||||||||||| |||||||||||||||||||||||||    
T  4615485 tttccaaccttcacgttttcgcgcataaaaaccaaaccgttaactcgtcttcgatgccgttttcgcctacacgcacctgacacttagctctatcataatc 4615386  T
Q  155 tacagaaaaattcaggtttcaaccacccaaatatcgatttcc 196  Q
    |||||||||||| | |||||||||||| ||| || |||||||    
T  4615385 tacagaaaaattgaagtttcaaccacctaaaaattgatttcc 4615344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 87 - 191
Target Start/End: Original strand, 15368180 - 15368284
Alignment:
Q  87 caaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaat 186  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||||     
T  15368180 caaaccgttaacccgttttcgatgtcgttttcgcctacacgctcctgacacttagccctatcataatctacaaaaagattcaagtttcaaccacccaaaa 15368279  T
Q  187 atcga 191  Q
    |||||    
T  15368280 atcga 15368284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 65 - 196
Target Start/End: Original strand, 16224007 - 16224138
Alignment:
Q  65 tcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaa 164  Q
    |||||||||||  | |||||  ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||| ||| |    
T  16224007 tcacgttttcggacataaaaatcaaaccgttaacccgttttcgatgtcgttttcgtctacacgctcctgacacttagccctatcataatctacaaaaaga 16224106  T
Q  165 ttcaggtttcaaccacccaaatatcgatttcc 196  Q
    |||| ||||||||||||||||  |||||||||    
T  16224107 ttcaagtttcaaccacccaaaactcgatttcc 16224138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 64 - 203
Target Start/End: Complemental strand, 20899171 - 20899032
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||| | |||||  ||||||||||||||||||||||||  ||||||||||| |||||| ||| ||||||||||||||||||||| ||||||    
T  20899171 ttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcatgaaacttagctctatcataatctatagaaaa 20899072  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaacct 203  Q
    ||||| | |||||||||||||| |||||| |||| |||||    
T  20899071 attcaagcttcaaccacccaaaaatcgatctccaaaacct 20899032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 64 - 196
Target Start/End: Original strand, 27028376 - 27028505
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||| | |||||  |||||||   ||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27028376 ttcacgttttcgcacataaaaatcaaaccg---acccgttttcgatgccgttttcgcctaaacgctcctgacacttagctctatcataatctacagaaaa 27028472  T
Q  164 attcaggtttcaaccacccaaatatcgatttcc 196  Q
    ||||| |||||||||||||||| || |||||||    
T  27028473 attcaagtttcaaccacccaaaaattgatttcc 27028505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 64 - 278
Target Start/End: Complemental strand, 52266322 - 52266107
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||  ||||||||||| ||||||||||||| |||||| |||||| | || ||||||||||| ||||| |||| ||||| |||    
T  52266322 ttcacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgtcgttttcacctacatgttcatgacacttagccctatcttaatgtacag-aaa 52266224  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcatttt--caaaatggttcataatcgaagtttcacacgaaactctcgt 261  Q
    ||||| |||||||| |||| ||  ||  |||||| | |||| || |||||||||||||  ||||| |||| | ||| ||| |||||| |||||||| ||     
T  52266223 attcaagtttcaacaaccccaaattcattttccaaagccttacacaaacactcatttttccaaaacggttaacaattgaattttcacccgaaactcccga 52266124  T
Q  262 tttctcccaaacgactc 278  Q
    |||||||||||||||||    
T  52266123 tttctcccaaacgactc 52266107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 64 - 196
Target Start/End: Original strand, 16157422 - 16157553
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||  |||||||||||||||||| ||| || |||| |||||||||||||| |||||    
T  16157422 ttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatagcactatcataatctaccgaaaa 16157521  T
Q  164 attcaggtttcaaccacccaaatatcgatttcc 196  Q
    | ||| |||||||| | ||||| ||||||||||    
T  16157522 actcaagtttcaacta-ccaaaaatcgatttcc 16157553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 87 - 191
Target Start/End: Original strand, 15403193 - 15403296
Alignment:
Q  87 caaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaat 186  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| |||||| |||||||||     
T  15403193 caaaccgtta-cccgttttcgatgtcgttttcgcctacacgctcctgacacttagccctatcataatctacaaaaagattcaagtttcacccacccaaaa 15403291  T
Q  187 atcga 191  Q
    |||||    
T  15403292 atcga 15403296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 37 - 278
Target Start/End: Complemental strand, 30233336 - 30233095
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgaca 136  Q
    ||||||||| || ||| ||||| ||| ||||||||||||||| |||||  ||||||||||| ||||||||||||  |||||| |||||| | || |||||    
T  30233336 tgacagacagcaccagattttc-aatcttcacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgttcttgaca 30233238  T
Q  137 cttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcatttt--caaaatggttcat 234  Q
    |||||| ||||| |||| |||||||||||||| | |||||| |||| ||  ||  |||||| | |||| || |||||||||||||  ||||| |||| |     
T  30233237 cttagccctatcttaatgtacagaaaaattcaag-ttcaacaaccccaaattcattttccaaagccttacacaaacactcatttttccaaaacggttaac 30233139  T
Q  235 aatcgaagtttcacacgaaactctcgttttctcccaaacgactc 278  Q
    ||| ||| ||||||  ||||||| || |||||||||||||||||    
T  30233138 aattgaattttcacctgaaactcccgatttctcccaaacgactc 30233095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 10705357 - 10705454
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctaca 158  Q
    ||||||||  ||||||||||||||| ||||||||||| | | ||| ||||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  10705357 attttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacactctcctgacacttggctctatcataatctaca 10705454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 10919127 - 10919224
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctaca 158  Q
    ||||||||  ||||||||||||||| ||||||||||| | | ||| ||||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  10919127 attttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacactctcctgacacttggctctatcataatctaca 10919224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 15214226 - 15214137
Alignment:
Q  71 tttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacaga 160  Q
    ||||||||||||||| ||||||||||| | | ||| ||||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15214226 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcctgacacttggctctatcataatctacaga 15214137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 5683173 - 5683073
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||||||| |||||| ||||||||||| | | ||| || |  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5683173 ttttcaccatttcgcgcataaaattcaaaccgttaatcggattttgacgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 5683074  T
Q  162 a 162  Q
    |    
T  5683073 a 5683073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 64 - 196
Target Start/End: Original strand, 15373958 - 15374090
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||  | |||||  ||||  ||||||||||||||||||  |||||| |||||||| ||||||||||||||  |||||||||||| | |||     
T  15373958 ttcacgttttcggacataaaaatcaaatggttaacccgttttcgatgccgttttcacctacacgttcctgacacttagccttatcataatctataaaaag 15374057  T
Q  164 attcaggtttcaaccacccaaatatcgatttcc 196  Q
    ||||| |||||||||||||||| || |||||||    
T  15374058 attcaagtttcaaccacccaaaaattgatttcc 15374090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 26921886 - 26921778
Alignment:
Q  69 gttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattca 168  Q
    |||||||||| |||||  ||||||||||| | ||||||||||| |||||| |||||| | |||||||||||||| |||||||| | ||||||||||||||    
T  26921886 gttttcgcgcataaaaatcaaaccgttaatctgttttcgatgtcgttttcacctacatgttcctgacacttagcactatcatattgtacagaaaaattca 26921787  T
Q  169 ggtttcaac 177  Q
     ||||||||    
T  26921786 agtttcaac 26921778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 80 - 220
Target Start/End: Complemental strand, 19622693 - 19622552
Alignment:
Q  80 taaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaacca 179  Q
    |||||| ||||||||||| | | ||| ||||| |||||||||||||||||| | ||||||| ||||||||||||||| ||||||||| | ||||||||||    
T  19622693 taaaattcaaaccgttaatcggattttgatgtcgttttcgcctacacgctcttaacacttaactctatcataatctatagaaaaattgaagtttcaacca 19622594  T
Q  180 -cccaaatatcgatttccagaaccttgcataaacactcattt 220  Q
     |||||| |||  |||||| |||||  ||||| |||| ||||    
T  19622593 tcccaaaaatcattttccaaaacctcacataatcacttattt 19622552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 7132704 - 7132593
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||  ||||||||||| |||||||||||   ||||||||||||| |||||| |||||| || ||||||||||||||| |||| ||    
T  7132704 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgataccgttttcgcctacatgctcctaacacttggcactatcataatctaca-aaaattt 7132606  T
Q  167 caggtttcaacca 179  Q
    || ||||||||||    
T  7132605 catgtttcaacca 7132593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 113 - 185
Target Start/End: Original strand, 15371714 - 15371786
Alignment:
Q  113 gttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaa 185  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| |||||||| |||||||    
T  15371714 gttttcgcctacacgctcctgacacttagccctatcataatctacaaaaagattcaagtttcaactacccaaa 15371786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 278
Target Start/End: Complemental strand, 15852157 - 15851942
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||| |||| |||| |||||  ||||  ||||| ||||||||||||  |||||| |||||| | || ||||||||||| ||||| |||| |||| ||||    
T  15852157 ttcacatttttgcgcataaaaatcaaattgttaatccgttttcgatgccgttttcacctacatgttcatgacacttagccctatcttaatgtacataaaa 15852058  T
Q  164 attcaggtttcaaccacccaaatatcga-tttccagaaccttgcataaacactcatttt-caaaatggttcataatcgaagtttcacacgaaactctcgt 261  Q
    | ||| |||||||| |||| || ||| | |||||| | |||| || ||||||||||||| |||||||||| | ||| ||| ||||||  ||||||| |||    
T  15852057 aatcaagtttcaacaaccccaa-atccattttccaaagccttacacaaacactcattttccaaaatggttaacaattgaattttcacctgaaactcccgt 15851959  T
Q  262 tttctcccaaacgactc 278  Q
    ||||| |||||||||||    
T  15851958 tttcttccaaacgactc 15851942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 179
Target Start/End: Original strand, 20000340 - 20000451
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||  ||||||||||| ||||||||||||  ||||||||||||| |||||| |||||| || |||||||||| |||| |||| ||    
T  20000340 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatttaca-aaaattt 20000438  T
Q  167 caggtttcaacca 179  Q
    || ||||||||||    
T  20000439 catgtttcaacca 20000451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 13043384 - 13043280
Alignment:
Q  71 tttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcagg 170  Q
    ||||| |||||||||||||||  |||| ||||||||||||  ||||| |||||| ||||| | ||||||| ||||||||||||||||||| || |||| |    
T  13043384 tttcgtgcgtaaaatccaaactattaatccgttttcgatgccgtttttgcctacgcgctcttaacacttaactctatcataatctacagagaatttcaag 13043285  T
Q  171 tttca 175  Q
    |||||    
T  13043284 tttca 13043280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 18293506 - 18293406
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||||||||||||||||||||||||  ||||| ||||||||| ||||    
T  18293506 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcctgacacttgactctaacataatctatagaa 18293407  T
Q  162 a 162  Q
    |    
T  18293406 a 18293406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 45314500 - 45314416
Alignment:
Q  78 cgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaa 162  Q
    |||||||| ||||||||||| | | ||| ||||| ||||||||||||||| |||||| ||||| |||||||||||||||||||||    
T  45314500 cgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacacgatcctgatacttaactctatcataatctacagaaa 45314416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 17375906 - 17375789
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||||||| |||||| ||| ||||||| |   ||| ||||| ||||| ||||||| |||||||  | ||||||||||||||| ||||||||    
T  17375906 ttttcaccatttcgcgcataaaattcaatccgttaatcgaattttgatgtcgtttttgcctacatgctcctggaatttagctctatcataacctacagaa 17375807  T
Q  162 aaattcaggtttcaacca 179  Q
    ||||||| ||||||||||    
T  17375806 aaattcaagtttcaacca 17375789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 18168580 - 18168696
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||||||||||||||| |   ||| |||   |||||||||||||||||| ||||||||  ||||| ||||||||||| ||    
T  18168580 ttttcaccatttcgcgcgtaaaatccaaaccgttaatcaaattttgataccgttttcgcctacacgctcttgacacttgactctaacataatctaca-aa 18168678  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  18168679 aatttcatgtttcaacca 18168696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 54363907 - 54363791
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||| |||| |||||| |||||||||||   | ||| ||||  |||||||||||||||||| ||||||||||||||||||||||||| || |    
T  54363907 ttttcaccattttgcgcataaaattcaaaccgttaattggattttgatgccgttttcgcctacacgctcgtgacacttagctctatcataatctatag-a 54363809  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  54363808 aatttcaagtttcaacca 54363791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 159
Target Start/End: Original strand, 3337994 - 3338092
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||||||||||||| | ||||||||| | | ||| | ||  |||||||| |||||||||||||||||| |||||||| ||||||||||    
T  3337994 attttcaccatttcgcgcgtaaaattccaaccgttaatcggattttggtgccgttttcgcttacacgctcctgacacttggctctatcttaatctacag 3338092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 159
Target Start/End: Complemental strand, 9870875 - 9870777
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||||||| ||| ||||||||||||  || |||||||||||||||    
T  9870875 attttcaccatttcgcgcgtaaaattcaaaccgttaatcagattttgatgccgttttcgcctccactctcctgacacttgactatatcataatctacag 9870777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 159
Target Start/End: Original strand, 15990891 - 15990989
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||| ||||||||| | ||||||||| | | ||| ||||  ||||||| |||||| |||||||||||| |||||||||||||||||||    
T  15990891 attttcaccatttcgtgcgtaaaattccaaccgttaatcggattttgatgccgttttcggctacactctcctgacacttggctctatcataatctacag 15990989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 25119854 - 25119754
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||||||||||||||  |||||||||| | | ||| ||||  |||||||||||||||||||||||||||  |||||  |||||||| ||||    
T  25119854 ttttcaccatttcgcgcgtaaaatttaaaccgttaatcggattttgatgcagttttcgcctacacgctcctgacacttgactctaaaataatctatagaa 25119755  T
Q  162 a 162  Q
    |    
T  25119754 a 25119754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 8574360 - 8574316
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcga 108  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||    
T  8574360 ttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcga 8574316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 272
Target Start/End: Complemental strand, 15273065 - 15272906
Alignment:
Q  113 gttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacc-caaatatcgatttccagaaccttgcataaa 211  Q
    ||||||||||||| |||||| ||||||||| | ||||||||  |||||||||| |  |||| ||| ||| ||||| ||  ||| || |||||  || |||    
T  15273065 gttttcgcctacatgctcctaacacttagcacgatcataatgcacagaaaaatcccagttttaacaacctcaaat-tcattttaca-aacctcacacaaa 15272968  T
Q  212 cactcatttt-caaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaa 272  Q
    |||||||||| ||||| |||| | ||| ||| ||||| ||||||||| |||||||| |||||    
T  15272967 cactcattttccaaaacggttaacaattgaattttcaaacgaaactcccgttttcttccaaa 15272906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 12837846 - 12837775
Alignment:
Q  209 aaacactcatttt--caaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaacgactc 278  Q
    |||||||||||||  ||||| |||| | ||| ||| |||||| |||||||| || |||||||||||||||||    
T  12837846 aaacactcatttttccaaaacggttaacaattgaattttcacccgaaactcccgatttctcccaaacgactc 12837775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 131; Significance: 6e-68; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 26 - 196
Target Start/End: Original strand, 24267434 - 24267604
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||  |||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  24267434 cgatttctgctcgacagataacatcagattttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctaca 24267533  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttcc 196  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||    
T  24267534 cgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccagccaaacatcgatttcc 24267604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 26 - 196
Target Start/End: Complemental strand, 5110174 - 5110004
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||  ||||||||||| ||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  5110174 cgatttctgctcgacagacaacatcagattttctaatcttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctaca 5110075  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttcc 196  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||| ||||||||||    
T  5110074 cgctcctgacacttagctctatcataatctacagaaaaactcaagtttcaaccaaccaaaaatcgatttcc 5110004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 26 - 209
Target Start/End: Complemental strand, 5289533 - 5289353
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||  ||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||     
T  5289533 cgatttctgctcgacagacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctacg 5289434  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcata 209  Q
    | ||||||||||||||||||||||||||||||||   |||||| ||||||||||||||||  |||||||||||||||| |||||    
T  5289433 cactcctgacacttagctctatcataatctacag---aattcaagtttcaaccacccaaaactcgatttccagaacctcgcata 5289353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 26 - 196
Target Start/End: Complemental strand, 29416018 - 29415846
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||  |||| |||||| ||| ||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||    
T  29416018 cgatttctgctcgacatacaacatcagattttctaattttcacgttttcgcgcataaaatccaaaccgttaacccattttcgatgtcgttttcgcctaca 29415919  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaa--attcaggtttcaaccacccaaatatcgatttcc 196  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||| || |||||||    
T  29415918 cgctcctgacacttagctctatcataatctacagaaaaagattcaagtttcaaccacccaaaaattgatttcc 29415846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 18259598 - 18259436
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||| | ||| |  ||||||||||||||||||||||||  ||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  18259598 ttcacgttttcgcacataataatcaaaccgttaacccgttttcgatgccgtttttgcctaaacgctcctgacacttagctctatcataatctacagaaaa 18259499  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    ||||| |||||||||||||||| ||||||||||| |||||  ||||| |||| |||| |||||    
T  18259498 attcaagtttcaaccacccaaaaatcgatttccaaaacctcacataatcacttatttgcaaaa 18259436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 8227155 - 8226993
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||| | ||||| |||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  8227155 ttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagccctatcataatctatagaaaa 8227056  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    ||||| |||| ||||||||||| |||| |||||| |||||  ||||| |||| |||| |||||    
T  8227055 attcaagtttaaaccacccaaaaatcggtttccaaaacctcacataatcacttatttgcaaaa 8226993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 16448199 - 16448037
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||  ||||||||||||| ||||||||||  |||||| ||||| |||||||||||| ||||||||||| || ||| ||||||    
T  16448199 ttcacgttttcgcgcctaaaaatcaaaccgttaaccagttttcgatgccgttttcacctacgcgctcctgacacatagctctatcacaaactaaagaaaa 16448100  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    |||   |||||||||||||||| ||||||||||| |||||  ||||| ||||||||| |||||    
T  16448099 attacagtttcaaccacccaaaaatcgatttccaaaacctcacataatcactcatttgcaaaa 16448037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 23532311 - 23532149
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||| | ||||| |||||||||||||||||||||||||  ||||||||||| |||| ||||||||||||| ||||||||||||| ||||||    
T  23532311 ttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgcacctgacacttagccctatcataatctatagaaaa 23532212  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    | ||| |||| ||||||||||| |||| |||||| ||| |  ||||| |||| |||| |||||    
T  23532211 aatcaagtttaaaccacccaaaaatcggtttccaaaacttcacataatcacttatttgcaaaa 23532149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 113 - 278
Target Start/End: Complemental strand, 31468153 - 31467987
Alignment:
Q  113 gttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaac 212  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||  ||||| |    
T  31468153 gtttttgcctacacgctcctgacacttaactctatcataatctacagaaaaattcaagtttcaaccacccaaaaatcgatttccagaacctcacataatc 31468054  T
Q  213 actcattttcaaaatggttcata-atcgaagtttcacacgaaactctcgttttctcccaaacgactc 278  Q
    ||| |||| |||||  ||| | | | |||  |||||  ||||| || ||||||||||||||||||||    
T  31468053 acttatttgcaaaaacgtttagacaccgacttttcaagcgaaaatcccgttttctcccaaacgactc 31467987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 24441309 - 24441418
Alignment:
Q  87 caaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaat 186  Q
    ||||||||||||||||||||||||  ||||| |||||||||||||||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||||     
T  24441309 caaaccgttaacccgttttcgatgccgtttttgcctacacgctcctgacacttagccctatcataatctacaaaaatattcaagtttcaaccacccaaaa 24441408  T
Q  187 atcgatttcc 196  Q
    ||||||||||    
T  24441409 atcgatttcc 24441418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 64 - 278
Target Start/End: Original strand, 25650688 - 25650903
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||  ||||| ||||| |   ||||||||  |||||| |||||| | ||||||||||||||  |||| |||| |||||||||    
T  25650688 ttcacgttttcgcgcataaaaatcaaactgttaatctaatttcgatgccgttttcacctacatgttcctgacacttagccttatcttaatgtacagaaaa 25650787  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcatttt-caaaatggttcataatcgaagtttcacacgaaactctcgtt 262  Q
    ||||| |||||||| |||| ||  ||  |||||| |||||| || ||||||||||||| ||||| |||| | ||| ||| |||||||||||||| || ||    
T  25650788 attcaagtttcaacaaccccaacttcattttccaaaaccttacacaaacactcattttacaaaacggttaacaattgaattttcacacgaaactttcatt 25650887  T
Q  263 ttctcccaaacgactc 278  Q
    ||||||||||||||||    
T  25650888 ttctcccaaacgactc 25650903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 64 - 194
Target Start/End: Original strand, 24563069 - 24563198
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||  |||||||||||||||||| ||| || ||||||||||||||||||| |||||    
T  24563069 ttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatagctctatcataatctaccgaaaa 24563168  T
Q  164 attcaggtttcaaccacccaaatatcgattt 194  Q
    | | | |||||||| | ||||| ||||||||    
T  24563169 actaaagtttcaacta-ccaaaaatcgattt 24563198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 64 - 197
Target Start/End: Complemental strand, 13750699 - 13750567
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||  ||||| ||||| | ||||||||||   ||||| |||||| |||||||||||||||| |||||||||||||||||||     
T  13750699 ttcacgttttcgcgcataaaaatcaaactgttaatctgttttcgatgcc-ttttcacctacatgctcctgacacttagccctatcataatctacagaaag 13750601  T
Q  164 attcaggtttcaaccacccaaatatcgatttcca 197  Q
    ||||| |||||||||||||||| |||||||||||    
T  13750600 attcaagtttcaaccacccaaaaatcgatttcca 13750567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 21 - 272
Target Start/End: Original strand, 26089148 - 26089399
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| ||||||||||||||||||||| | ||| |||||||||||||||||||||||  |||||| |||||| ||||| ||||||||| || |||||||      
T  26089148 tagtccgatttctgcctgacagacaatatcagattttccaattttcacgttttcgcatgtaaaaaccaaactgttaatccgttttcggtgctgttttcct 26089247  T
Q  121 ctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaac-cacccaaatatcgatttccagaaccttgcataaacactcatt 219  Q
    ||||  | || ||||||||||| ||||| |||| | ||||||| |||| ||||||||   ||||||| ||  |||||| |||| | ||  ||||||||||    
T  26089248 ctacttgttcatgacacttagccctatcttaatatgcagaaaatttcaagtttcaacattcccaaat-tcattttccaaaaccctaca-caacactcatt 26089345  T
Q  220 tt-caaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaa 272  Q
    || ||||| |||| | ||| ||| |||||| |||||||| |||||||| |||||    
T  26089346 ttccaaaacggttaacaattgaattttcacccgaaactcccgttttcttccaaa 26089399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 19174794 - 19174907
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||||||| |||||| ||||  |||||||||||||| |||| |||||||||||| ||||||||||||||| |||||||||||||||||  |    
T  19174794 ttttcaccatttcgcgcataaaattcaaattgttaacccgttttcaatgtcgttttcgcctacgcgctcctgacacttaactctatcataatctaca-ta 19174892  T
Q  162 aaattcaggtttcaa 176  Q
    ||||||| |||||||    
T  19174893 aaattcaagtttcaa 19174907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 67 - 179
Target Start/End: Original strand, 16231509 - 16231620
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||  ||||||||||| ||||||||||||  ||||||||||||| |||||| |||||| || ||||||||||||||| |||| ||    
T  16231509 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatctaca-aaaattt 16231607  T
Q  167 caggtttcaacca 179  Q
    || ||||||||||    
T  16231608 catgtttcaacca 16231620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 18087461 - 18087350
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||  ||||||||||| ||||||||||||  ||||||||||||| |||||| |||||| || ||||||||||||||| |||| ||    
T  18087461 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgcagttttcgcctacatgctcctaacacttggcactatcataatctaca-aaaattt 18087363  T
Q  167 caggtttcaacca 179  Q
    || ||||||||||    
T  18087362 catgtttcaacca 18087350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 62 - 177
Target Start/End: Original strand, 16135917 - 16136031
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||| ||||||||||| |||||||||||||||||||| |||  |||||||||||  |||||||||||| || |||||||||||||||||  |    
T  16135917 ttttcaccattttgcgcgtaaaattcaaaccgttaacccgttttcaatgccgttttcgcctatgcgctcctgacacataactctatcataatctaca-ta 16136015  T
Q  162 aaattcaggtttcaac 177  Q
    ||||||| ||||||||    
T  16136016 aaattcaagtttcaac 16136031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 61 - 196
Target Start/End: Complemental strand, 29847703 - 29847569
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacaga 160  Q
    ||||||||  ||||||||||||||| | ||||||||| | | ||| ||||| |||||||||||||| |||||||||||| |||||||||||||||||| |    
T  29847703 attttcaccatttcgcgcgtaaaattccaaccgttaatcggattttgatgtcgttttcgcctacactctcctgacacttggctctatcataatctaca-a 29847605  T
Q  161 aaaattcaggtttcaaccacccaaatatcgatttcc 196  Q
      | |||| || |||||||||| || ||||||||||    
T  29847604 ctatttcaagtctcaaccaccccaaaatcgatttcc 29847569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 165
Target Start/End: Complemental strand, 15735580 - 15735453
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgaca 136  Q
    |||||||||||| ||| ||||||||||| |||||||||| ||||||||  ||||| ||||| ||||||| ||||  |||||| |||||| |||||| |||    
T  15735580 tgacagacaacaccagattttccaattt-cacgttttcgtgcgtaaaaatcaaactgttaatccgtttttgatgccgttttcacctacatgctcctaaca 15735482  T
Q  137 cttagctctatcataatctacagaaaaat 165  Q
     ||||| ||||||||||  ||||||||||    
T  15735481 attagcactatcataatgcacagaaaaat 15735453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 165
Target Start/End: Original strand, 23994350 - 23994477
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgaca 136  Q
    |||||||||||| ||| ||||| | || | |||||||||||| |||||  ||||| ||||| ||||||||||||  ||||||||||||| |||||| |||    
T  23994350 tgacagacaacatcagattttcaacttct-acgttttcgcgcataaaaatcaaactgttaatccgttttcgatgccgttttcgcctacatgctcctaaca 23994448  T
Q  137 cttagctctatcataatctacagaaaaat 165  Q
    |||||| ||||||||||  ||||||||||    
T  23994449 cttagcactatcataatgcacagaaaaat 23994477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 72 - 159
Target Start/End: Original strand, 25753072 - 25753159
Alignment:
Q  72 ttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    |||||||||||||| ||||||||||| | | ||| ||||  |||||||||||||| |||||||||||| |||||||||||||||||||    
T  25753072 ttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcgcctacactctcctgacacttggctctatcataatctacag 25753159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 72 - 159
Target Start/End: Original strand, 25755242 - 25755329
Alignment:
Q  72 ttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    |||||||||||||| ||||||||||| | | ||| ||||  |||||||||||||| |||||||||||| |||||||||||||||||||    
T  25755242 ttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcgcctacactctcctgacacttggctctatcataatctacag 25755329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 22226387 - 22226166
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||| |||||| |||||||| ||||||||| |  ||||| ||||||||| | ||    
T  22226387 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgtcgttttcacctacacgatcctgacacatgactctaacataatctataaaa 22226288  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  | |    
T  22226287 aatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataatcacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 22226188  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  22226187 gttttctcccaaacgactcaac 22226166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 67 - 179
Target Start/End: Original strand, 23977386 - 23977497
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||  ||||||||||| ||||||||||||  |||| |||||||| |||||| |||||| || |||||||||| |||| |||| ||    
T  23977386 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgtttccgcctacatgctcctaacacttggcactatcataatttaca-aaaattt 23977484  T
Q  167 caggtttcaacca 179  Q
    || ||||||||||    
T  23977485 catgtttcaacca 23977497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 278
Target Start/End: Original strand, 18776608 - 18776824
Alignment:
Q  63 tttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaa 162  Q
    |||||||||||| ||| |||||  ||||||||||| | ||||||||||  |||||| |||||  | || ||||||||||| ||||| |||| ||||||||    
T  18776608 tttcacgttttcacgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacgtgttcatgacacttagccctatcttaatgtacagaaa 18776707  T
Q  163 aattcaggtttcaac-cacccaaatatcgatttccagaaccttgcataaacactcatttt--caaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    |||||| ||||||||   ||||||| ||  |||||| | |||| ||  ||||||||||||  ||||| |||| | ||| ||| |||||| |||||| | |    
T  18776708 aattcaagtttcaacattcccaaat-tcattttccaaagccttaca-caacactcatttttccaaaacggttaacaattgaattttcacccgaaaccccc 18776805  T
Q  260 gttttctcccaaacgactc 278  Q
    | |||||||||||||||||    
T  18776806 gatttctcccaaacgactc 18776824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 18003292 - 18003194
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaat 165  Q
    |||||||||||| |||||  |||||||||||  |||||||||||  |||||| |||||| |||||| ||||||||| ||||||||||  ||||||||||    
T  18003292 acgttttcgcgcataaaaatcaaaccgttaattcgttttcgatgccgttttcacctacatgctccttacacttagcactatcataatgcacagaaaaat 18003194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 73 - 179
Target Start/End: Original strand, 28948208 - 28948313
Alignment:
Q  73 tcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtt 172  Q
    ||||||||||| | ||||||||||| | | ||| ||||  ||||||||||| | ||||||||||||| ||||||||||||||||||| ||| |||| |||    
T  28948208 tcgcgcgtaaagttcaaaccgttaatcggattttgatgccgttttcgcctatatgctcctgacacttggctctatcataatctacag-aaatttcaagtt 28948306  T
Q  173 tcaacca 179  Q
    |||||||    
T  28948307 tcaacca 28948313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 18659059 - 18659156
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctaca 158  Q
    ||||||||  ||||||||||||||  ||||||||||| | | ||| ||||| |||||||||||||| ||||||| |||| | ||||||||||||||||    
T  18659059 attttcaccatttcgcgcgtaaaagtcaaaccgttaatcggattttgatgtcgttttcgcctacactctcctgaaacttggatctatcataatctaca 18659156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 33314855 - 33314635
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||||||| |||||| ||||||||||| | | ||| ||||  |||||| |||||||| |||||||||||  ||||| ||||||||| | ||    
T  33314855 ttttcaccatttcgcgcataaaatgcaaaccgttaatcggattttgatgccgttttcacctacacgatcctgacacttgactctaacataatctata-aa 33314757  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| |||| |||  | |||||| || |  |||||  ||||||||||||  | |    
T  33314756 aatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataagcacttattggcgaaaatgcttaaacatcgacatttcacacgaaaaaccc 33314657  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  33314656 gttttctcccaaacgactcaac 33314635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 179
Target Start/End: Complemental strand, 19983928 - 19983821
Alignment:
Q  71 tttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcagg 170  Q
    ||||||||||||||| ||||||||||| | | ||| ||||| ||||||||||| ||||||| |||||||  ||||| ||||||||| || ||| |||| |    
T  19983928 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctatacgctccggacacttgactctaacataatctatag-aaatttcatg 19983830  T
Q  171 tttcaacca 179  Q
    |||||||||    
T  19983829 tttcaacca 19983821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 159
Target Start/End: Complemental strand, 19443461 - 19443363
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||||||||||||| | ||||||||| | | ||| ||||  |||||||||||||  |||||||||||| ||||||||| |||||||||    
T  19443461 attttcaccatttcgcgcgtaaaattccaaccgttaatcggattttgatgccgttttcgcctacattctcctgacacttggctctatcaaaatctacag 19443363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 16377021 - 16376801
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||| | |||||||||||  ||||| ||||||||| | ||    
T  16377021 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcctgacacttgactctaacataatctata-aa 16376923  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  | |    
T  16376922 aatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataatcacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 16376823  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  16376822 gttttctcccaaacgactcaac 16376801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 16384345 - 16384125
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||| | |||||||||||  ||||| ||||||||| | ||    
T  16384345 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcctgacacttgactctaacataatctata-aa 16384247  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  | |    
T  16384246 aatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataatcacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 16384147  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  16384146 gttttctcccaaacgactcaac 16384125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 16556789 - 16556673
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||| |||||||||| ||||||||||| | | ||| ||||| |||||| |||||||| |||||||||||  ||||| ||||||||| | ||    
T  16556789 ttttcaccatttcacgcgtaaaatgcaaaccgttaatcggattttgatgtcgttttcacctacacgatcctgacacttgactctaacataatctata-aa 16556691  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  16556690 aatttcatgtttcaacca 16556673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 16633345 - 16633229
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||| |||||||||| ||||||||||| | | ||| ||||| |||||| |||||||| |||||||||||  ||||| ||||||||| | ||    
T  16633345 ttttcaccatttcacgcgtaaaatgcaaaccgttaatcggattttgatgtcgttttcacctacacgatcctgacacttgactctaacataatctata-aa 16633247  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  16633246 aatttcatgtttcaacca 16633229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 35015803 - 35015687
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||| | ||||| ||||| | | ||| ||||| ||||||||||| |||||| ||||||||  ||||| ||||||||||| ||    
T  35015803 ttttcaccatttcgcgcgtaaatttcaaactgttaatcggattttgatgtcgttttcgcctatacgctcatgacacttgactctaacataatctaca-aa 35015705  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  35015704 aatttcatgtttcaacca 35015687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 165
Target Start/End: Complemental strand, 13621429 - 13621334
Alignment:
Q  70 ttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaat 165  Q
    |||| |||| |||||  ||||||||||| ||||||||||||  |||||| |||||| |||||| ||| ||||| ||||||||||  ||||||||||    
T  13621429 tttttgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacaattagcactatcataatgcacagaaaaat 13621334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 159
Target Start/End: Complemental strand, 16132850 - 16132753
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||||||||||| ||||| ||||||| | | ||| ||||  ||||||||| |||| || ||||||||| |||||||||||||||||||    
T  16132850 attttcaccatttcgcgcgtaaattccaa-ccgttaatcggattttgatgccgttttcgcccacactcttctgacacttggctctatcataatctacag 16132753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 25348031 - 25348077
Alignment:
Q  113 gttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||    
T  25348031 gttttcgcctacacgctcctgacacttggctctatcttaatctacag 25348077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 10488307 - 10488423
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||| | |||||||||||  ||||| ||||||||| | ||    
T  10488307 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcctgacacttgactctaacataatctata-aa 10488405  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  10488406 aatttcatgtttcaacca 10488423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 16650019 - 16649903
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| ||||||||  ||||||||||  ||||| ||||||||| | ||    
T  16650019 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacacgaccctgacacttgactctaacataatctata-aa 16649921  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  16649920 aatttcatgtttcaacca 16649903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 7366190 - 7366138
Alignment:
Q  127 gctcctgacacttagctctatcataatctacagaaaaattcaggtttcaacca 179  Q
    ||||||||||||||||||||||||| | |||||| ||||||| ||||||||||    
T  7366190 gctcctgacacttagctctatcatattttacagagaaattcaagtttcaacca 7366138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 25904753 - 25904869
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| |||||| |||| | | ||| ||||  |||||| |||||||| || ||||||||  ||||| ||||||||| | ||    
T  25904753 ttttcaccatttcgcgcgtaaaatgcaaaccattaatcggattttgatgccgttttcacctacacgatcttgacacttgactctaacataatctata-aa 25904851  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  25904852 aatttcatgtttcaacca 25904869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 31468201 - 31468149
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgtttt 73  Q
    |||| |||||||||||| |||||||||| ||  ||||||||||||||||||||    
T  31468201 tagtccgatttctgcctaacagacaacatcaaattttccaattttcacgtttt 31468149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 19102811 - 19102745
Alignment:
Q  160 aaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    ||||||||  |||||||||||||||| |||| |||||| |||||  ||||| ||||||||| |||||    
T  19102811 aaaaattccagtttcaaccacccaaaaatcggtttccaaaacctcacataatcactcatttgcaaaa 19102745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 6e-68; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 21 - 203
Target Start/End: Original strand, 20058067 - 20058249
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| ||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||  ||||||||    
T  20058067 tagtccgatttctgcctgacagacaacatcagattttccaattttcacgttttcgtgcgtaaaatccaaaccattaacccgttttcgatgccgttttcgc 20058166  T
Q  121 ctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaacct 203  Q
    |||||||||||||||| ||||||||||||||||||||| ||||| ||| |||||||||||||||| |||| ||||||||||||    
T  20058167 ctacacgctcctgacagttagctctatcataatctacaaaaaaaatcaagtttcaaccacccaaaaatcggtttccagaacct 20058249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 21 - 226
Target Start/End: Complemental strand, 7321062 - 7320858
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| |||||| |||||||||||||||| ||| |||||||||||  | ||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  7321062 tagtccgatttttgcctgacagacaacatcagattttccaatttcaatgttttcgcgcgtaaaatccaaaccgttaatccgttttcgatgtcgttttcgc 7320963  T
Q  121 ctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattt 220  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| |||| ||||||||||| |||||||||||||||||  ||||| |||| ||||    
T  7320962 ctacacgctcctgacacttagctctatcataatctgcag-aaaattcaagttttaaccacccaaaaatcgatttccagaacctcacataatcacttattt 7320864  T
Q  221 tcaaaa 226  Q
     |||||    
T  7320863 gcaaaa 7320858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 26 - 203
Target Start/End: Complemental strand, 13528173 - 13527996
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||  ||||||||||| ||| ||||| || |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  13528173 cgatttctgctcgacagacaacatcagattttctaactttcacgttttcgcgcgtaaaatccaaaccgttaacccattttcgatgtcgttttcgcctaca 13528074  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaacct 203  Q
    |||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  13528073 cgctcctgacacttagccttatcataatctacagaaaaattcaagtttcaaccacccaaaaatcgatttccaaaacct 13527996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 26 - 196
Target Start/End: Original strand, 18270913 - 18271083
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||  ||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||    
T  18270913 cgatttctgctcgacagacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacctgttttcgatgccgttttcgcctaca 18271012  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttcc 196  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  18271013 cgctcctgacacttagctctatcataatctacaaaaagattcaagtttcaaccacccaaaaatcgatttcc 18271083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 26 - 196
Target Start/End: Original strand, 18275567 - 18275737
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||  ||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||    
T  18275567 cgatttctgctcgacagacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaacctgttttcgatgccgttttcgcctaca 18275666  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttcc 196  Q
    ||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  18275667 cgctcctgacacttagctctatcataatctacaaaaagattcaagtttcaaccacccaaaaatcgatttcc 18275737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 206 - 335
Target Start/End: Complemental strand, 18853186 - 18853057
Alignment:
Q  206 cataaacactcattttcaaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaacgactcaacaaccattttcttaacgtcaaaaca 305  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  18853186 cataaacactcattttcaaaatggttcacaatcgaagtttcacacgaaactctcgttttctcccaaacggctcaacaaccattttcttaacatcaaaaca 18853087  T
Q  306 aaaaattcaatttgtctaactcacccaaaa 335  Q
     |||||||||||||||||||||||||||||    
T  18853086 gaaaattcaatttgtctaactcacccaaaa 18853057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 64 - 196
Target Start/End: Original strand, 18824246 - 18824378
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||| | |||||  ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18824246 ttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccattttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 18824345  T
Q  164 attcaggtttcaaccacccaaatatcgatttcc 196  Q
    ||||| |||||||||||| ||| || |||||||    
T  18824346 attcaagtttcaaccacctaaaaattgatttcc 18824378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 21473441 - 21473550
Alignment:
Q  87 caaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaat 186  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||||     
T  21473441 caaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagccctatcataatctacaaaaagattcaagtttcaaccacccaaaa 21473540  T
Q  187 atcgatttcc 196  Q
    ||||||||||    
T  21473541 atcgatttcc 21473550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 64 - 196
Target Start/End: Original strand, 52983852 - 52983984
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    |||||||||| |||| |||||  ||||||||||| | ||||||||||  |||||| |||||| | |||||| ||||||| |||||||||||||||||||     
T  52983852 ttcacgtttttgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgaaacttagccctatcataatctacagaaat 52983951  T
Q  164 attcaggtttcaaccacccaaatatcgatttcc 196  Q
    ||||| |||||||||||||||| ||||||||||    
T  52983952 attcaagtttcaaccacccaaaaatcgatttcc 52983984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 65 - 185
Target Start/End: Original strand, 51476618 - 51476738
Alignment:
Q  65 tcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaa 164  Q
    |||||||||||| | |||||  ||||||||||| | ||||||||||  |||||| |||||| | |||||| ||||||| |||||||||||||||||||||    
T  51476618 tcacgttttcgctcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctgaaacttagccctatcataatctacagaaaaa 51476717  T
Q  165 ttcaggtttcaaccacccaaa 185  Q
    |||| ||||||||||||||||    
T  51476718 ttcaagtttcaaccacccaaa 51476738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 51324127 - 51324228
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacaga 160  Q
    ||||||||  ||||||||||||||| ||||||||||| | | ||| ||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  51324127 attttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacatgctcctgacacttggctctatcataatctacaga 51324226  T
Q  161 aa 162  Q
    ||    
T  51324227 aa 51324228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 37 - 165
Target Start/End: Complemental strand, 20825578 - 20825451
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgaca 136  Q
    |||||||||||| ||| ||||| | || | |||||||||||| |||||  ||||||||||| ||||||||||||| ||||||||||||| |||||| |||    
T  20825578 tgacagacaacatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgtcgttttcgcctacatgctcctaaca 20825480  T
Q  137 cttagctctatcataatctacagaaaaat 165  Q
    |||||| ||||||||||  ||||||||||    
T  20825479 cttagcactatcataatgcacagaaaaat 20825451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 39060977 - 39061068
Alignment:
Q  71 tttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaa 162  Q
    ||||||||||||||| ||||| ||||| | | ||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39060977 tttcgcgcgtaaaattcaaactgttaatcagattttgatgtcgttttcgcctacacgctcctgacacttaactctatcataatctacagaaa 39061068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 61 - 161
Target Start/End: Complemental strand, 21239474 - 21239374
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacaga 160  Q
    ||||||||  ||||||||||||||| ||||||||||| | | ||| ||||  ||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  21239474 attttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgtttttgcctacacgctcctgacacttggctctatcataatctacaga 21239375  T
Q  161 a 161  Q
    |    
T  21239374 a 21239374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 21858901 - 21859017
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||| |||||||||||||||||||||||||||  ||||| ||||||||||| ||    
T  21858901 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacacgctcctgacacttgactctaacataatctaca-aa 21858999  T
Q  162 aaattcaggtttcaacca 179  Q
    || ||||  |||||||||    
T  21859000 aatttcatttttcaacca 21859017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 179
Target Start/End: Original strand, 17148185 - 17148296
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||  |||| |||||| ||||||||||||  ||||||||||||| |||||| |||||| || ||||||||||||||| |||| ||    
T  17148185 acgttttcgcgcataaaaatcaaatcgttaatccgttttcgatgcagttttcgcctacatgctcctaacacttggcactatcataatctaca-aaaattt 17148283  T
Q  167 caggtttcaacca 179  Q
    || ||||||||||    
T  17148284 catgtttcaacca 17148296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 64 - 278
Target Start/End: Complemental strand, 27330545 - 27330330
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||  ||||| ||||| |||||||||||   |||||| |||||  | || ||||||||||| ||||| |||| |||||||||    
T  27330545 ttcacgttttcgcgcataaaaatcaaactgttaatccgttttcgataccgttttcacctacgtgttcatgacacttagccctatcttaatgtacagaaaa 27330446  T
Q  164 attcaggtttcaac-cacccaaatatcgatttccagaaccttgcataaacactcatttt--caaaatggttcataatcgaagtttcacacgaaactctcg 260  Q
    ||||| ||||||||   ||||||| ||  |||||| | |||| ||  ||||||||||||  ||||||| || | ||| ||| |||||| |||||| ||||    
T  27330445 attcaagtttcaacattcccaaat-tcattttccacagccttaca-caacactcatttttccaaaatgattaacaattgaattttcacccgaaaccctcg 27330348  T
Q  261 ttttctcccaaacgactc 278  Q
     |||||||||||||||||    
T  27330347 atttctcccaaacgactc 27330330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 44035619 - 44035399
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||| ||| | | ||| ||||| |||||| ||||||||||||||||||||  ||||| ||||||||||| ||    
T  44035619 ttttcaccatttcgcgcgtaaaattcaaaccgctaatcggattttgatgtcgttttcacctacacgctcctgacacttgactctaacataatctaca-aa 44035521  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    |  |||| |||||||||| ||||||  ||   ||||| |||||  ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  |||    
T  44035520 attttcatgtttcaaccatcccaaaagtcatattccaaaacctcacataatcacttattgacgaaaacgcttaaacatcgatatttcacacgaaaaactc 44035421  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  44035420 gttttctcccaaacgactcaac 44035399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 61 - 159
Target Start/End: Original strand, 21659996 - 21660094
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||||||||||||| | ||||||||| |   ||| ||||| |||||||||||||| |||||| ||||| |||||||||||||||||||    
T  21659996 attttcaccatttcgcgcgtaaaattccaaccgttaatcgaattttgatgtcgttttcgcctacactctcctggcacttggctctatcataatctacag 21660094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 16656271 - 16656371
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||  ||||| |||||||||||||||||| ||||||||  ||||| | ||||||||||||    
T  16656271 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcggattatgatgtcgttttcgcctacacgctcatgacacttgactctaacttaatctacagaa 16656370  T
Q  162 a 162  Q
    |    
T  16656371 a 16656371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 18060406 - 18060290
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||||| |||||||||||  ||||| ||||||||| | ||    
T  18060406 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacacgatcctgacacttgactctaacataatctata-aa 18060308  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  18060307 aatttcatgtttcaacca 18060290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 177
Target Start/End: Original strand, 17004245 - 17004359
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||||| |||||||||||  ||||| ||||||||| | ||    
T  17004245 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacacgatcctgacacttgactctaacataatctata-aa 17004343  T
Q  162 aaattcaggtttcaac 177  Q
    || |||| ||||||||    
T  17004344 aatttcatgtttcaac 17004359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 7791934 - 7791888
Alignment:
Q  113 gttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||    
T  7791934 gttttcgcctacacgctcctgacacttggctctatcttaatctacag 7791888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 20031018 - 20030972
Alignment:
Q  113 gttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||    
T  20031018 gttttcgcctacacgctcctgacacttggctctatcttaatctacag 20030972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 278
Target Start/End: Original strand, 35054239 - 35054449
Alignment:
Q  69 gttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattca 168  Q
    |||||||||| |||||  ||||||||||| ||||||||||||  |||||| |||||  | ||  ||||| |||| ||||| |||| || |||||||||||    
T  35054239 gttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacgtgttcaagacacctagccctatcttaatgtaaagaaaaattca 35054338  T
Q  169 ggtttcaac-cacccaaatatcgatttccagaaccttgcataaacactcatttt--caaaatggttcataatcgaagtttcacacgaaactctcgttttc 265  Q
     ||||||||   ||||||| ||  |||||| | |||| ||  ||||||||||||  ||||| |||| | ||| ||| ||||||  ||||| |||| ||||    
T  35054339 agtttcaacattcccaaat-tcattttccaaagccttaca-caacactcatttttccaaaacggttaacaattgaattttcacctgaaaccctcgatttc 35054436  T
Q  266 tcccaaacgactc 278  Q
    |||||||||||||    
T  35054437 tcccaaacgactc 35054449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 38055738 - 38055518
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||| | || ||||||||  ||||| ||||||||| | ||    
T  38055738 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcttgacacttgactctaacataatctata-aa 38055640  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  | |    
T  38055639 aatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataatcacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 38055540  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  38055539 gttttctcccaaacgactcaac 38055518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 7792032 - 7791949
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctc 144  Q
    ||||||||  ||||||||||||||| | ||||||||| | | ||| | ||  ||||||||||||||||||||||||||| ||||    
T  7792032 attttcaccatttcgcgcgtaaaattccaaccgttaatcggattttggtgccgttttcgcctacacgctcctgacacttggctc 7791949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 21650637 - 21650572
Alignment:
Q  113 gttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaacca 179  Q
    |||||||||||||||||||| ||||||  ||||| | ||||||||| |||| |||| ||||||||||    
T  21650637 gttttcgcctacacgctcctcacacttgactctaacgtaatctaca-aaaatttcatgtttcaacca 21650572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 3e-67; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 82 - 335
Target Start/End: Original strand, 432105 - 432357
Alignment:
Q  82 aaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacc 181  Q
    |||||||||||||||| |||  ||||||   ||||||| |||| || |||| ||||||||||||||| || || ||| ||||||||| ||| |||||| |    
T  432105 aaatccaaaccgttaatccgacttcgattccgttttcgtctacgcgttccttacacttagctctatcttattccaca-aaaaattcatgttccaaccatc 432203  T
Q  182 caaatatcgatttccagaaccttgcataaacactcattttcaaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaacgactcaac 281  Q
    | || |  |||| ||  ||| |  || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  432204 ccaaaacagattgcccaaacatcacacaaacactcattttcaaaatggttcacaatcgaagtttcacacgaaactctcgttttctcccaaacgactcaac 432303  T
Q  282 aaccattttcttaacgtcaaaacaaaaaattcaatttgtctaactcacccaaaa 335  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  432304 aaccattttcttaacgtcaaaacataaaattcaatttgtctaactcacccaaaa 432357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 26 - 203
Target Start/End: Original strand, 10817399 - 10817576
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||| ||||||||||| ||| ||||| ||| ||||||||||| ||||||||||||||||||||||||| |||||||||   ||||||||||||    
T  10817399 cgatttctgcccgacagacaacatcagattttctaatcttcacgttttcacgcgtaaaatccaaaccgttaacccattttcgatgcccttttcgcctaca 10817498  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaacct 203  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    
T  10817499 cgctcctgacacttagctctatcataatctatagaaaaattcaagtttcaaccacccaaaaatcgatttccagaacct 10817576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 82 - 342
Target Start/End: Complemental strand, 23982120 - 23981860
Alignment:
Q  82 aaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacc 181  Q
    |||| ||||||||||| ||  |||||||   ||||||| |||| || |||| ||||||||||||||| || || |||||||| |||| ||| |||||| |    
T  23982120 aaattcaaaccgttaatccaatttcgattccgttttcgtctacgcgatccttacacttagctctatcttattccacagaaaa-ttcatgttccaaccatc 23982022  T
Q  182 caaatatcgatttccagaaccttgcataaacactcattttcaaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaacgactcaac 281  Q
    | |  |   ||| ||  |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23982021 ccacaaaaaattgcccaaacctcacataaacactcattttcaaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaacgactcaac 23981922  T
Q  282 aaccattttcttaacgtcaaaacaaaaaattcaatttgtctaactcacccaaa-acaccaaa 342  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||    
T  23981921 aaccattttcttaacgtcaaaatagaaaattcaatttgtctaactcacccaaatacaccaaa 23981860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 26 - 226
Target Start/End: Complemental strand, 22357362 - 22357163
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||  ||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  22357362 cgatttctgctcgacagacaacatcagattttctaattttcacgttttcgcgcgtaaaatccaaaccgttaactcgttttcgatgccgttttcgcctaca 22357263  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaa 225  Q
    ||||||||||||||| |||||||| | |||||||||||||||| |||||||||||||||| |||||||||||||||||  ||||| |||| |||| ||||    
T  22357262 cgctcctgacacttaactctatca-attctacagaaaaattcaagtttcaaccacccaaaaatcgatttccagaacctcacataatcacttatttgcaaa 22357164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 56 - 278
Target Start/End: Complemental strand, 21297789 - 21297566
Alignment:
Q  56 ttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatct 155  Q
    |||||||||||| |||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21297789 ttccaattttcatgttttcgcgcataaaatccaaactgttaacccgttttcgatgtcgttttcgcctacacgctcctgacacttagctctatcataatct 21297690  T
Q  156 acagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaatggttcata-atcgaagtttcacacgaaa 254  Q
     |||||||||| | |||||||||||||||| |||||||||||||||||| ||||| |||| |||| |||||  ||| | | | |||  |||||  |||||    
T  21297689 ccagaaaaattaaagtttcaaccacccaaaaatcgatttccagaaccttacataatcacttatttgcaaaaacgtttagacagcgacttttcaagcgaaa 21297590  T
Q  255 ctctcgttttctcccaaacgactc 278  Q
     || ||||||||||||||||||||    
T  21297589 atcccgttttctcccaaacgactc 21297566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 26 - 226
Target Start/End: Original strand, 23539355 - 23539555
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||  ||||||||||| ||| ||||| ||| | |||||||| |||||||||||||||||||||| ||| |||||||||  |||||||||||||    
T  23539355 cgatttctgctcgacagacaacatcagattttctaatctacacgtttttgcgcgtaaaatccaaaccgttatcccattttcgatgccgttttcgcctaca 23539454  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaa 225  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| || ||||||||||||||  ||||| |||| |||| ||||    
T  23539455 cgctcctgacacttagctctatcataatctacagataaattcaagtttcaaccacccaaaaattgatttccagaacctcacataatcacttatttgcaaa 23539554  T
Q  226 a 226  Q
    |    
T  23539555 a 23539555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 56 - 226
Target Start/End: Complemental strand, 21311332 - 21311162
Alignment:
Q  56 ttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatct 155  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  21311332 ttccaattttcatgttttcgcgcataaaatccaaaccgttaacccgttttcgatgccgttttcgcctatacgctcctgacacttagctctatcataatct 21311233  T
Q  156 acagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    ||||||||||| | ||||| |||||||||| |||||||||||||||||  ||||| |||| |||| |||||    
T  21311232 acagaaaaattaaagtttcgaccacccaaaaatcgatttccagaacctcacataatcacttatttgcaaaa 21311162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 8952487 - 8952330
Alignment:
Q  38 gacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacac 137  Q
    ||||||||||| ||| ||| ||||  ||||||||||||||| ||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  8952487 gacagacaacatcagattt-ccaaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacac 8952389  T
Q  138 ttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttcc 196  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||    
T  8952388 ttagctctatcataatctacagaaaaattcaagtttcaaccacctaaaaatcgatttcc 8952330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 43 - 196
Target Start/End: Complemental strand, 22777512 - 22777359
Alignment:
Q  43 acaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagc 142  Q
    |||||| ||| ||||| ||||||||||||||||||| |||||| ||||| |||| |||||||||||||  |||||||||||||||||| ||||||||| |    
T  22777512 acaacatcagattttctaattttcacgttttcgcgcataaaattcaaactgttatcccgttttcgatgccgttttcgcctacacgctcatgacacttaac 22777413  T
Q  143 tctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttcc 196  Q
    |||||||||||||||||||| ||||| ||||||||| |||||| ||||||||||    
T  22777412 tctatcataatctacagaaagattcaagtttcaaccgcccaaaaatcgatttcc 22777359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 40726317 - 40726479
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||| | ||||| |||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  40726317 ttcacgttttcgctcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagccctatcataatctatagaaaa 40726416  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    ||||| |||| ||||||||||| |||| |||||| |||||  ||||| |||| |||| |||||    
T  40726417 attcaagtttaaaccacccaaaaatcggtttccaaaacctcacataatcacttatttgcaaaa 40726479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 18318629 - 18318467
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||  ||||||||||||| ||||||||||  |||||||||||| |||||||||||||||||||||||| ||||||  |||||    
T  18318629 ttcacgttttcgcgcctaaaaatcaaaccgttaacctgttttcgatgccgttttcgcctacgcgctcctgacacttagctctatcacaatctaaggaaaa 18318530  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    ||||  |||||||||||||||| |||| |||||| |||||  ||||| ||||||||| |||||    
T  18318529 attccagtttcaaccacccaaaaatcggtttccaaaacctcacataatcactcatttgcaaaa 18318467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 20765678 - 20765516
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||| ||| |||||  |||||||||||||| |||||||||  |||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  20765678 ttcacgttttcacgcctaaaaatcaaaccgttaaccccttttcgatgccgttttcgcctacgcgctcctgacacttagctctatcacaatctacagaaaa 20765579  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    ||||  |||||||||||||||| || | |||||| |||||  ||||| ||||||||| |||||    
T  20765578 attccagtttcaaccacccaaaaataggtttccaaaacctcacataatcactcatttgcaaaa 20765516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 21 - 163
Target Start/End: Complemental strand, 21406074 - 21405932
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| |||||||| |||||||||||||| ||| |||||||||| ||||||||||||||||| |||| |||  |||||||||||||| || | ||||||||    
T  21406074 tagtccgatttctccctgacagacaacatcagattttccaattgtcacgttttcgcgcgtagaatctaaattgttaacccgttttcaatttcgttttcgc 21405975  T
Q  121 ctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    |||||| ||||||||||||||||||||||||||||||| ||||    
T  21405974 ctacacactcctgacacttagctctatcataatctacataaaa 21405932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 64 - 278
Target Start/End: Original strand, 21109349 - 21109564
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| ||||   ||||||||||| | ||||||||||| |||||| |||||| | |||||||||||||| |||||| ||| |||||||||    
T  21109349 ttcacgttttcgcgcataaatatcaaaccgttaatctgttttcgatgtcgttttcacctacatgttcctgacacttagccctatcacaatgtacagaaaa 21109448  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcatttt-caaaatggttcataatcgaagtttcacacgaaactctcgtt 262  Q
    ||| | |||||||| |||| ||  ||  |||||| |||||  || ||||||||||||| ||||| |||| | ||| ||| ||||||| ||||||  ||||    
T  21109449 attgaagtttcaacaaccccaaattcattttccaaaacctcacacaaacactcattttccaaaacggttaacaattgaattttcacatgaaacttccgtt 21109548  T
Q  263 ttctcccaaacgactc 278  Q
    ||||||||||||||||    
T  21109549 ttctcccaaacgactc 21109564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 64 - 196
Target Start/End: Complemental strand, 22007310 - 22007179
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||  |||||||||||||||||| ||| || |||| |||||||||||||| |||||    
T  22007310 ttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcatgagacatagcactatcataatctaccgaaaa 22007211  T
Q  164 attcaggtttcaaccacccaaatatcgatttcc 196  Q
    | ||| |||||||| | ||||| ||||||||||    
T  22007210 actcaagtttcaacta-ccaaaaatcgatttcc 22007179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 21399220 - 21399129
Alignment:
Q  71 tttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaa 162  Q
    ||||||||||||||| ||||||||||| | | ||| ||||| ||||||||||||||||||||||||||||  | ||||||||||||||||||    
T  21399220 tttcgcgcgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacacgctcctgacacttaagtttatcataatctacagaaa 21399129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 20197764 - 20197664
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||||||||||||||  |||||||||| | | ||| | ||  |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20197764 ttttcaccatttcgcgcgtaaaatttaaaccgttaatcggattttgttgccgttttcgcctacacgctcctgacacttaactctatcataatctacagaa 20197665  T
Q  162 a 162  Q
    |    
T  20197664 a 20197664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 179
Target Start/End: Complemental strand, 9731020 - 9730912
Alignment:
Q  70 ttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcag 169  Q
    ||||||||| |||||  ||||||||||| |||||||||| |  ||||||||||||| |||||| |||||| || ||||||||||||||| |||| ||||     
T  9731020 ttttcgcgcataaaaatcaaaccgttaatccgttttcgacgccgttttcgcctacatgctcctaacacttggcactatcataatctaca-aaaatttcat 9730922  T
Q  170 gtttcaacca 179  Q
    ||||||||||    
T  9730921 gtttcaacca 9730912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 281
Target Start/End: Original strand, 35581643 - 35581864
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||||| |||||||||||  ||||| ||||||||| | ||    
T  35581643 ttttcactatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacacgatcctgacacttgactctaacataatctataaaa 35581742  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  | |    
T  35581743 aatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataatcacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 35581842  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  35581843 gttttctcccaaacgactcaac 35581864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 36990419 - 36990198
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||||| |||||||||||  ||||| ||||||||| | ||    
T  36990419 ttttcactatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacacgatcctgacacttgactctaacataatctataaaa 36990320  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  | |    
T  36990319 aatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataatcacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 36990220  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  36990219 gttttctcccaaacgactcaac 36990198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 177
Target Start/End: Original strand, 20711537 - 20711644
Alignment:
Q  70 ttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcag 169  Q
    ||||| ||| |||||  ||||||||||| | ||||||||||| |||||| |||||| | || ||||||||||| ||||| |||| ||||||||||||||     
T  20711537 ttttcacgcataaaaatcaaaccgttaatctgttttcgatgtcgttttcacctacatgttcatgacacttagccctatcttaatgtacagaaaaattcaa 20711636  T
Q  170 gtttcaac 177  Q
    ||||||||    
T  20711637 gtttcaac 20711644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 272
Target Start/End: Original strand, 21204384 - 21204589
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||  ||||||||||| ||||||||||||  |||||| |||||| |||||| ||||||||| ||||||||||  | ||||||||     
T  21204384 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacacttagcactatcataatgcatagaaaaatc 21204483  T
Q  167 caggtttcaaccacc-caaatatcgatttccagaaccttgcataaacactcatttt-caaaatggttcataatcgaagtttcacacgaaactctcgtttt 264  Q
    |  |||||||| ||| ||||| || ||||    |||||  || ||||||||||||| ||||| |||| | ||  ||| ||||| ||||||||| ||||||    
T  21204484 ccagtttcaacaacctcaaat-tc-attttataaacctcacacaaacactcattttccaaaacggttaacaaatgaattttcaaacgaaactcccgtttt 21204581  T
Q  265 ctcccaaa 272  Q
    ||||||||    
T  21204582 ctcccaaa 21204589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 1220166 - 1220050
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||||||||||||||| ||||||||  ||||| ||||||||||| ||    
T  1220166 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcttgacacttgactctaacataatctaca-aa 1220068  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| |||| |||||    
T  1220067 aatttcatgttttaacca 1220050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 10778614 - 10778498
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||||||||||||||| ||||||||  ||||| ||||||||||| ||    
T  10778614 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcttgacacttgactctaacataatctaca-aa 10778516  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| || |||||||    
T  10778515 aatttcatgtctcaacca 10778498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 21933029 - 21932809
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| |||| ||||||| |||||| | |||||||||||  ||||| ||||||||| | ||    
T  21933029 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgctgttttcacctacatgatcctgacacttgactctaacataatctata-aa 21932931  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  | |    
T  21932930 aatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataatcacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 21932831  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  21932830 gttttctcccaaacgactcaac 21932809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 21939199 - 21938979
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| |||| ||||||| |||||| | |||||||||||  ||||| ||||||||| | ||    
T  21939199 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgctgttttcacctacatgatcctgacacttgactctaacataatctata-aa 21939101  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  | |    
T  21939100 aatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataatcacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 21939001  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  21939000 gttttctcccaaacgactcaac 21938979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 28901824 - 28901924
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||  ||||| |||||||||||||||||| ||||||||  ||||| | ||||||||||||    
T  28901824 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcggattatgatgtcgttttcgcctacacgctcatgacacttgactctaacttaatctacagaa 28901923  T
Q  162 a 162  Q
    |    
T  28901924 a 28901924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 28938219 - 28938319
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||  ||||| |||||||||||||||||| ||||||||  ||||| | ||||||||||||    
T  28938219 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcggattatgatgtcgttttcgcctacacgctcatgacacttgactctaacttaatctacagaa 28938318  T
Q  162 a 162  Q
    |    
T  28938319 a 28938319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 72 - 179
Target Start/End: Original strand, 23514179 - 23514285
Alignment:
Q  72 ttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggt 171  Q
    ||||| |||||||| ||||||||||| | | ||| ||||  |||||||||||||||||||||||||||  |||||  |||||||||| |||| |||| ||    
T  23514179 ttcgcacgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcctgacacttgactctaagataatctaca-aaaatttcatgt 23514277  T
Q  172 ttcaacca 179  Q
    ||||||||    
T  23514278 ttcaacca 23514285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 22883732 - 22883616
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||||| |||||||||||  ||||| ||||||||| | ||    
T  22883732 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacacgatcctgacacttgactctaacataatctata-aa 22883634  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  22883633 aatttcatgtttcaacca 22883616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 21650155 - 21650253
Alignment:
Q  66 cacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaa 164  Q
    ||||||||||||| |||||  ||||||||||| ||||||| ||||| |||||| |||||  | ||  |||||||||| ||||| |||| ||||||||||    
T  21650155 cacgttttcgcgcataaaaatcaaaccgttaatccgtttttgatgtcgttttcacctacttgttcacgacacttagccctatcttaatgtacagaaaaa 21650253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 176
Target Start/End: Original strand, 22111598 - 22111710
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||| | |||||  ||| ||||||| | ||||||||||  |||||| || ||| | | ||| |||||||| |||||||||| || ||||||    
T  22111598 ttcacgttttcgcacataaaaatcaatccgttaatctgttttcgatgccgttttcacccacatgtttctggcacttagcactatcataatgtatagaaaa 22111697  T
Q  164 attcaggtttcaa 176  Q
    ||||| |||||||    
T  22111698 attcaagtttcaa 22111710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 22470453 - 22470548
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatcta 156  Q
    ||||||||  ||||||  ||||||| | |||| |||| | | ||||||||| |||||| ||||||| |||||||||||| | ||||||||||||||    
T  22470453 attttcaccatttcgcaggtaaaattccaaccattaatcggatttcgatgtcgttttctcctacactctcctgacacttggttctatcataatcta 22470548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 26 - 225
Target Start/End: Original strand, 729 - 928
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    |||||||||| |||||||||||| ||  ||||| |||||||||||||| |||||||||| |||||||| || |||||||||||||| |||||||||||||    
T  729 cgatttctgcttgacagacaacatcaaattttctaattttcacgtttttgcgcgtaaaagccaaaccgctagcccgttttcgatgtcgttttcgcctaca 828  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaa 225  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||  ||||| |||| |||| ||||    
T  829 cgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaacaatcgatttccagaacctcacataatcacttatttgcaaa 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 21 - 196
Target Start/End: Original strand, 25717 - 25892
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| ||||||||| ||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||   ||||||||    
T  25717 tagtccgatttctgtctgacagacaataacagattttccaattttcactttttcgtgcgtaaaatccaaaccattaacccgttttcgataccgttttcgc 25816  T
Q  121 ctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttcc 196  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||| ||||||||||    
T  25817 ctacacgctcctgacacttagctctatcatattctatagaaaaattcaagtttcaaccacccaaaaatcgatttcc 25892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 64 - 220
Target Start/End: Complemental strand, 40636 - 40480
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||| | |||||  ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||| |||     
T  40636 ttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctaaacgctcctgacacttagctctatcataatctacaaaaag 40537  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattt 220  Q
    ||||| |||||||||||||||| ||||||||||| |||||  ||||| |||| ||||    
T  40536 attcaagtttcaaccacccaaaaatcgatttccaaaacctcacataatcacttattt 40480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 9e-61; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 26 - 196
Target Start/End: Complemental strand, 17611750 - 17611580
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||  ||||||||||| ||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  17611750 cgatttctgctcgacagacaacatcagattttctaattttcacgttttcgcgtgtaaaatccaaaccgttaacccgttttcgatgccgttttcgcctaca 17611651  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttcc 196  Q
    ||||||||||||||| ||||||||||||||||| ||| ||||| |||||||||||||||| ||||||||||    
T  17611650 cgctcctgacacttaactctatcataatctacaaaaagattcaagtttcaaccacccaaaaatcgatttcc 17611580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 23451097 - 23451218
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    |||||||||||||||||||||  |||||||||||| |||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23451097 ttcacgttttcgcgcgtaaaaatcaaaccgttaactcgttttcgatgccgttttcgcctacacgctcctgacacttaactctatcataatctacagaaaa 23451196  T
Q  164 attcaggtttcaaccacccaaa 185  Q
    ||||| ||||||||||||||||    
T  23451197 attcaagtttcaaccacccaaa 23451218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 26220177 - 26220339
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||  ||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  26220177 ttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgtttttgcctacgcgctcctgacacttagctctatcataatctacagaaaa 26220276  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    |||   |||||||||||||||| || | |||||| |||||  ||||| ||||||||| |||||    
T  26220277 atttcagtttcaaccacccaaaaattggtttccaaaacctcacataatcactcatttgcaaaa 26220339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 66 - 185
Target Start/End: Original strand, 34302177 - 34302296
Alignment:
Q  66 cacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaat 165  Q
    ||||||||||||| ||||| |||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  34302177 cacgttttcgcgcataaaaaccaagccgttaacccgttttcgatgccgttttcgcctacacgctcctaacacttagctctatcataatctacggaaaaat 34302276  T
Q  166 tcaggtttcaaccacccaaa 185  Q
    ||| ||||||||||||||||    
T  34302277 tcaagtttcaaccacccaaa 34302296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 26222708 - 26222546
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    |||| |||||||||| |||||  ||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  26222708 ttcatgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacgcgctcctgacacttagctctatcacaatctacagaaaa 26222609  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    |||   |||||||||||||||| || | |||||| |||||  ||||| ||||||||| |||||    
T  26222608 atttcagtttcaaccacccaaaaattggtttccaaaacctcacataatcactcatttgcaaaa 26222546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 73 - 181
Target Start/End: Original strand, 24496237 - 24496345
Alignment:
Q  73 tcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtt 172  Q
    |||||| ||||| || ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  24496237 tcgcgcataaaaacctaaccgttaacccgttttcgatggcgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtt 24496336  T
Q  173 tcaaccacc 181  Q
    |||||||||    
T  24496337 tcaaccacc 24496345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 3273513 - 3273634
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||| ||||| ||||| ||||| |||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  3273513 ttcacgtttccgcgcataaaaaccaaatcgttaacccgtttttgatgccgttttcgcctacacgctcctgacacttagctctatcatattctacagataa 3273612  T
Q  164 attcaggtttcaaccacccaaa 185  Q
    ||||| ||||||||||||||||    
T  3273613 attcaagtttcaaccacccaaa 3273634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 24979771 - 24979874
Alignment:
Q  93 gttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgat 192  Q
    |||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||    
T  24979771 gttaacccattttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaagtttcaaccacccaaaaattgat 24979870  T
Q  193 ttcc 196  Q
    ||||    
T  24979871 ttcc 24979874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 63 - 272
Target Start/End: Original strand, 20481056 - 20481266
Alignment:
Q  63 tttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaa 162  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||| |||||||||||||| | ||||| |||| ||||||||    
T  20481056 tttcaagttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacatgctcctgacacttaaccctatcttaatgtacagaaa 20481155  T
Q  163 aattcaggtttcaac-cacccaaatatcgatttccagaaccttgcataaacactcatttt--caaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    |||||| ||||||||   ||||||| ||  |||||| | |||| ||  ||||||||||||  ||||| |||| | ||| ||| |||||| |||||||| |    
T  20481156 aattcaagtttcaacattcccaaat-tcattttccaaagccttaca-caacactcatttttccaaaacggttaacaattgaattttcacccgaaactccc 20481253  T
Q  260 gttttctcccaaa 272  Q
    |||||||||||||    
T  20481254 gttttctcccaaa 20481266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 64 - 197
Target Start/End: Complemental strand, 22584081 - 22583948
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    |||||||||| |||| |||||  ||||||||||| |  |||||||||  |||||| |||||| | |||||||||||||| ||||||||||||||| ||||    
T  22584081 ttcacgtttttgcgcataaaaaacaaaccgttaatctattttcgatgccgttttcacctacatgttcctgacacttagccctatcataatctacaaaaaa 22583982  T
Q  164 attcaggtttcaaccacccaaatatcgatttcca 197  Q
    ||||| |||||||||||||||| |||||||||||    
T  22583981 attcaagtttcaaccacccaaaaatcgatttcca 22583948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 30766333 - 30766220
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||||||||| || |||||||||||||||||| |||  |||||||||||||||||| ||| || ||||||||||||||||||| |||||    
T  30766333 ttcacgttttcgcgcgtaaaaacccaaccgttaacccgttttcaatgccgttttcgcctacacgctcatgagacatagctctatcataatctaccgaaaa 30766234  T
Q  164 attcaggtttcaac 177  Q
    | | | ||||||||    
T  30766233 actaaagtttcaac 30766220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 62 - 215
Target Start/End: Original strand, 39114725 - 39114878
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| |||| |||||| | | ||| |||||||||||||||||||||||||||||||||  ||||| ||||||||||| ||    
T  39114725 ttttcaccatttcgcgcgtaaaattcaaatcgttaatcggattttgatgttgttttcgcctacacgctcctgacacttgactctaacataatctaca-aa 39114823  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacact 215  Q
    || | || ||||||| || |||||| |||  |||||| ||||| |||||||||||    
T  39114824 aattccatgtttcaatcatcccaaaaatcattttccaaaacctcgcataaacact 39114878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 17501798 - 17501914
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||||||||||||| |||||||||| ||||||||||||||||||| |    
T  17501798 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgcccctgacacttggctctatcataatctacag-a 17501896  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  17501897 aatttcaagtttcaacca 17501914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 22532563 - 22532466
Alignment:
Q  59 caattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatcta 156  Q
    ||||||||||  ||||||| ||||||| ||||||||||| | | ||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  22532563 caattttcaccatttcgcgtgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacacgctcctgacacttggctctatcataatcta 22532466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 22537248 - 22537151
Alignment:
Q  59 caattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatcta 156  Q
    ||||||||||  ||||||| ||||||| ||||||||||| | | ||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  22537248 caattttcaccatttcgcgtgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacacgctcctgacacttggctctatcataatcta 22537151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 197
Target Start/End: Original strand, 23889431 - 23889563
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||| ||||||||| | |||  ||||||||||| | ||||||||||  |||||| |||||| | |||| | | ||||| ||||||||||||||||||||    
T  23889431 ttcacattttcgcgcattaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcctaatatttagccctatcataatctacagaaaa 23889530  T
Q  164 attcaggtttcaaccacccaaatatcgatttcca 197  Q
    ||||| |||||||||||||||| |||||||||||    
T  23889531 attcaagtttcaaccacccaaa-atcgatttcca 23889563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 62 - 158
Target Start/End: Original strand, 4233514 - 4233610
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctaca 158  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||| ||||||||||||||||||||||||||||  ||||||||||||||||    
T  4233514 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacacgctcctgacacttaaatctatcataatctaca 4233610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 13721567 - 13721456
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||  ||||||||||| ||||||||||||  ||||||||||||| |||||| |||||| || ||||||||||||||| |||| ||    
T  13721567 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatctaca-aaaattt 13721469  T
Q  167 caggtttcaacca 179  Q
    || ||||||||||    
T  13721468 catgtttcaacca 13721456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 272009 - 271788
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||||| |||||||||||  ||||| ||||||||| | ||    
T  272009 ttttcactatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacacgatcctgacacttgactctaacataatctataaaa 271910  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| ||||||||  | |||| | || |  |||||  ||||||||||||  | |    
T  271909 aatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataatcactcattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 271810  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  271809 gttttctcccaaacgactcaac 271788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 62 - 281
Target Start/End: Original strand, 829646 - 829867
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||||| |||||||||||  ||||| ||||||||| | ||    
T  829646 ttttcactatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacacgatcctgacacttgactctaacataatctataaaa 829745  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| ||||||||  | |||| | || |  |||||  ||||||||||||  | |    
T  829746 aatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataatcactcattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 829845  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  829846 gttttctcccaaacgactcaac 829867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 13662912 - 13662692
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||||||||||||||||||| ||||  ||||| ||||||||||| ||    
T  13662912 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcctgagacttgactctaacataatctaca-aa 13662814  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  | |    
T  13662813 aatttcatgtttcaaccatcccaaaattcattttccaaaacctcacataatcacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 13662714  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  13662713 gttttctcccaaacgactcaac 13662692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 179
Target Start/End: Complemental strand, 16873690 - 16873579
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||  ||||||||||| ||||||||||||  ||||||||||||| |||||| |||||| || |||||||||| |||| |||| ||    
T  16873690 acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttggcactatcataatttaca-aaaattt 16873592  T
Q  167 caggtttcaacca 179  Q
    || ||||||||||    
T  16873591 catgtttcaacca 16873579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 66 - 177
Target Start/End: Original strand, 273896 - 274007
Alignment:
Q  66 cacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaat 165  Q
    ||||||||||||| |||||  ||||||||||| ||||||||||||  |||||| |||||| |||||| ||||||||  ||||||||||  ||||||||||    
T  273896 cacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacacttagtactatcataatgcacagaaaaat 273995  T
Q  166 tcaggtttcaac 177  Q
     || ||||||||    
T  273996 ccaagtttcaac 274007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 641953 - 641842
Alignment:
Q  66 cacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaat 165  Q
    ||||||||||||| |||||  ||||||||||| ||||||||||||  |||||| |||||| |||||| ||||||||  ||||||||||  ||||||||||    
T  641953 cacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacacttagtactatcataatgcacagaaaaat 641854  T
Q  166 tcaggtttcaac 177  Q
     || ||||||||    
T  641853 ccaagtttcaac 641842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 827759 - 827648
Alignment:
Q  66 cacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaat 165  Q
    ||||||||||||| |||||  ||||||||||| ||||||||||||  |||||| |||||| |||||| ||||||||  ||||||||||  ||||||||||    
T  827759 cacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaacacttagtactatcataatgcacagaaaaat 827660  T
Q  166 tcaggtttcaac 177  Q
     || ||||||||    
T  827659 ccaagtttcaac 827648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 16039679 - 16039581
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaat 165  Q
    |||||||||||| |||||  |||||| |||| ||||||||||||| |||||| |||||| |||||| ||||||||| ||||||||||  ||||||||||    
T  16039679 acgttttcgcgcataaaaatcaaaccattaatccgttttcgatgtcgttttcacctacatgctcctaacacttagcactatcataatgcacagaaaaat 16039581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 272
Target Start/End: Complemental strand, 24386539 - 24386337
Alignment:
Q  70 ttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaat-tca 168  Q
    ||||||||| |||||  ||||||||||| ||||||||||||| |||||| |||||| |||| | ||||||||| ||||||||||  | |||||||| |||    
T  24386539 ttttcgcgcataaaaatcaaaccgttaatccgttttcgatgtcgttttcacctacatgctcttaacacttagcactatcataatgcatagaaaaatctca 24386440  T
Q  169 ggtttcaaccacc-caaatatcgatttccagaaccttgcataaacactcatttt-caaaatggttcataatcgaagtttcacacgaaactctcgttttct 266  Q
     |||||||| ||| ||||| ||  ||| || |||||  || ||||||||||||| |||||||||| | ||  ||| ||||| ||||||||| ||||||||    
T  24386439 -gtttcaacaacctcaaat-tcattttaca-aacctcacacaaacactcattttccaaaatggttaacaaatgaattttcaaacgaaactcccgttttct 24386343  T
Q  267 cccaaa 272  Q
    ||||||    
T  24386342 cccaaa 24386337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 39694707 - 39694611
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctac 157  Q
    ||||||||  ||||||||||||||| ||||||||||| | | ||| ||||| || ||||||||||| |||||||||||| | |||||||||||||||    
T  39694707 attttcaccatttcgcgcgtaaaatacaaaccgttaatcggattttgatgtcgtattcgcctacactctcctgacacttggttctatcataatctac 39694611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 77 - 179
Target Start/End: Complemental strand, 24717496 - 24717395
Alignment:
Q  77 gcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaa 176  Q
    ||||||||| || |||||||| | | ||| ||||  |||||||||||||||||||||||||||| ||||| ||||||||||| |||| |||| |||||||    
T  24717496 gcgtaaaattcataccgttaatcggattttgatgccgttttcgcctacacgctcctgacacttaactctaacataatctaca-aaaatttcatgtttcaa 24717398  T
Q  177 cca 179  Q
    |||    
T  24717397 cca 24717395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 179
Target Start/End: Complemental strand, 3431918 - 3431810
Alignment:
Q  70 ttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcag 169  Q
    |||||| || |||||  ||||||||||| ||||||||||||  ||||||||||||| |||||| ||||||  | ||||||||||||||| |||| ||||     
T  3431918 ttttcgtgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaacacttgacactatcataatctaca-aaaatttcat 3431820  T
Q  170 gtttcaacca 179  Q
    ||||||||||    
T  3431819 gtttcaacca 3431810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 22006908 - 22006688
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||||||||||||||  |||| ||||| | | ||| ||||  |||||||||||||||||| ||||||||  ||||| ||||||||||| ||    
T  22006908 ttttcaccatttcgcgcgtaaaatttaaactgttaatcggattttgatgccgttttcgcctacacgctcttgacacttgactctaacataatctaca-aa 22006810  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  | |    
T  22006809 aatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataatcacttattgacgaaaacgcttaaacatcgacatttcacacgaaaaaccc 22006710  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  22006709 gttttctcccaaacgactcaac 22006688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 39364396 - 39364493
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctaca 158  Q
    ||||||||  ||||||||||||||| | ||||||||| | | ||| | ||  ||||||||||||||||||||||||||| |||||||| |||||||||    
T  39364396 attttcaccatttcgcgcgtaaaattccaaccgttaatcggattttggtgccgttttcgcctacacgctcctgacacttggctctatcttaatctaca 39364493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 23809455 - 23809551
Alignment:
Q  71 tttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattc 167  Q
    ||||||||||||||||||||||||||| |||||||||||    |||||| |||| ||||||||| ||||| |||||||| | | |||| ||||||||    
T  23809455 tttcgcgcgtaaaatccaaaccgttaatccgttttcgattccattttcgtctacgcgctcctgaaacttaactctatcacattgtacataaaaattc 23809551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 15319807 - 15319690
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||| |||||||||| ||||||||||| | | ||| ||||  |||||| |||||||| |||||||||||  ||||| ||||||||| | ||    
T  15319807 ttttcaccatttcacgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacacgatcctgacacttgactctaacataatctataaaa 15319708  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  15319707 aatttcatgtttcaacca 15319690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 15500176 - 15500059
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||| |||||||||| ||||||||||| | | ||| ||||  |||||| |||||||| |||||||||||  ||||| ||||||||| | ||    
T  15500176 ttttcaccatttcacgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacacgatcctgacacttgactctaacataatctataaaa 15500077  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  15500076 aatttcatgtttcaacca 15500059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 159
Target Start/End: Original strand, 32950525 - 32950624
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgt-tttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||||||||||||| | |||||||||  ||  ||| | ||  |||||||||||||| |||||||||||| |||||||||||||||||||    
T  32950525 attttcaccatttcgcgcgtaaaattccaaccgttaattcggattttggtgccgttttcgcctacactctcctgacacttggctctatcataatctacag 32950624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 159
Target Start/End: Complemental strand, 44522606 - 44522508
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  |||||||||||||||   || |||||| | | ||| | || ||||||||||| |||||||||||||||| |||||||| ||||||||||    
T  44522606 attttcaccatttcgcgcgtaaaatttcaatcgttaatcggattttggtgctgttttcgcctccacgctcctgacacttggctctatcttaatctacag 44522508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 643912 - 644028
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||| | |||||||||||  ||||| ||||||||| | ||    
T  643912 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcctgacacttgactctaacataatctata-aa 644010  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  644011 aatttcatgtttcaacca 644028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 64 - 151
Target Start/End: Original strand, 24624430 - 24624517
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcata 151  Q
    |||| |||||||| | || ||| |||| |||||| |||||||| ||   ||||||||||||  |||||| ||||||||||||||||||    
T  24624430 ttcatgttttcgcacttagaattcaaatcgttaatccgttttcaattccgttttcgcctacgtgctccttacacttagctctatcata 24624517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 203
Target Start/End: Original strand, 24239270 - 24239412
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||||||| |||||| |||| |||||| | |  || ||||| |||||||||||| | ||| || || | ||||||||| ||| ||||| ||    
T  24239270 ttttcaccctttcgcgcataaaattcaaatcgttaatcggaatttgatgtcgttttcgcctacgcactcatgtcattcagctctatcgtaacctacataa 24239369  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaacct 203  Q
    ||||||| |||||| ||| |||||| |||  |||||| |||||    
T  24239370 aaattcaagtttcagccatcccaaaaatcattttccaaaacct 24239412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1957 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold1957
Description:

Target: scaffold1957; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 273 - 99
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||        | |||||||||||||||||||||||||| ||||| ||||| ||    
T  273 tagtacgatttctgcctgacagacaacatcagattttccaattttcacg--------cataaaatccaaaccgttaacccgtttttgatgtcgtttttgc 182  T
Q  121 ctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaacct 203  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  181 ctacacgctcctgacacttagctctaacataatctacagaaaaattcaagtttcaaccacccaaagatcgatttccagaacct 99  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 26 - 281
Target Start/End: Original strand, 146015 - 146272
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||    
T  146015 cgatttctgcctgacagacaacatcagattttccaattttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaca 146114  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaac-cacccaaatatcgatttccagaaccttgcataaacactcatttt--c 222  Q
    ||||||||||||||||| ||||| |||| |||||||||||||| ||||||||   ||||||| ||  |||||| | |||| ||  ||||||||||||  |    
T  146115 cgctcctgacacttagccctatcttaatgtacagaaaaattcaagtttcaacattcccaaat-tcattttccacagccttaca-caacactcatttttcc 146212  T
Q  223 aaaatggttcataatcgaagtttcacacgaaactctcgttttctccc-aaacgactcaac 281  Q
    ||||||||| | ||| ||| ||| || ||||||||  |||||||||| ||||||||||||    
T  146213 aaaatggttaacaattgaatttttacccgaaactcctgttttctcccaaaacgactcaac 146272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 206 - 342
Target Start/End: Complemental strand, 68362 - 68226
Alignment:
Q  206 cataaacactcattttcaaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaacgactcaacaaccattttcttaacgtcaaaaca 305  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  68362 cataaacactcattttcaaaatggttcgcaatcgaagtttcacacgaaactctcgttttctcccaaacgactcaacaaccattttcttaacgtcaaaata 68263  T
Q  306 aaaaattcaatttgtctaactcacccaaaacaccaaa 342  Q
     |||||||||||| |||||||||||||||||| ||||    
T  68262 gaaaattcaatttatctaactcacccaaaacaacaaa 68226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 109; Significance: 9e-55; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 55 - 203
Target Start/End: Complemental strand, 25952 - 25804
Alignment:
Q  55 tttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatc 154  Q
    |||||||  ||||||||||||||| ||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  25952 tttccaaccttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatc 25853  T
Q  155 tacagaaaaattcaggtttcaaccacccaaatatcgatttccagaacct 203  Q
    |||||||||||||| |||||||||||| ||| ||||||||||| |||||    
T  25852 tacagaaaaattcaagtttcaaccaccaaaaaatcgatttccaaaacct 25804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 106; Significance: 5e-53; HSPs: 4)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 21 - 278
Target Start/End: Original strand, 3978 - 4237
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| |||||| |||||||||||||| | ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||    
T  3978 tagtccgatttatgcctgacagacaatatcagattttccaattttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgc 4077  T
Q  121 ctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaac-cacccaaatatcgatttccagaaccttgcataaacactcatt 219  Q
    |||||||||| ||||||||||| ||||| |||| |||||||||||||| ||||||||   ||||||| ||  |||||| | |||| || |||| ||||||    
T  4078 ctacacgctcttgacacttagccctatcttaatgtacagaaaaattcaagtttcaacattcccaaat-tcattttccaaagcctttcacaaacgctcatt 4176  T
Q  220 tt--caaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaacgactc 278  Q
    ||  |||||  ||| | ||| ||| |||||| | |||||| || |||||||||||||||||    
T  4177 tttccaaaacagttaacaattgaattttcacccaaaactcccgatttctcccaaacgactc 4237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 21 - 278
Target Start/End: Original strand, 8592 - 8851
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| |||||| |||||||||||||| | ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||    
T  8592 tagtccgatttatgcctgacagacaatatcagattttccaattttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgc 8691  T
Q  121 ctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaac-cacccaaatatcgatttccagaaccttgcataaacactcatt 219  Q
    |||||||||| ||||||||||| ||||| |||| |||||||||||||| ||||||||   ||||||| ||  |||||| | |||| || |||| ||||||    
T  8692 ctacacgctcttgacacttagccctatcttaatgtacagaaaaattcaagtttcaacattcccaaat-tcattttccaaagcctttcacaaacgctcatt 8790  T
Q  220 tt--caaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaacgactc 278  Q
    ||  |||||  ||| | ||| ||| |||||| | |||||| || |||||||||||||||||    
T  8791 tttccaaaacagttaacaattgaattttcacccaaaactcccgatttctcccaaacgactc 8851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 159
Target Start/End: Original strand, 7476 - 7574
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||||  |||||||  |||||||||| | | ||| ||||  |||||||||||||| |||||||||||| |||||||||||||||||||    
T  7476 attttcaccatttcgcatgtaaaatttaaaccgttaatcggattttgatgccgttttcgcctacactctcctgacacttggctctatcataatctacag 7574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 159
Target Start/End: Original strand, 12090 - 12188
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||||  |||||||  |||||||||| | | ||| ||||  |||||||||||||| |||||||||||| |||||||||||||||||||    
T  12090 attttcaccatttcgcatgtaaaatttaaaccgttaatcggattttgatgccgttttcgcctacactctcctgacacttggctctatcataatctacag 12188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 106; Significance: 5e-53; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 21 - 278
Target Start/End: Original strand, 6586 - 6845
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| |||||| |||||||||||||| | ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||    
T  6586 tagtccgatttatgcctgacagacaatatcagattttccaattttcacgttttcgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgc 6685  T
Q  121 ctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaac-cacccaaatatcgatttccagaaccttgcataaacactcatt 219  Q
    |||||||||| ||||||||||| ||||| |||| |||||||||||||| ||||||||   ||||||| ||  |||||| | |||| || |||| ||||||    
T  6686 ctacacgctcttgacacttagccctatcttaatgtacagaaaaattcaagtttcaacattcccaaat-tcattttccaaagcctttcacaaacgctcatt 6784  T
Q  220 tt--caaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaacgactc 278  Q
    ||  |||||  ||| | ||| ||| |||||| | |||||| || |||||||||||||||||    
T  6785 tttccaaaacagttaacaattgaattttcacccaaaactcccgatttctcccaaacgactc 6845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 159
Target Start/End: Original strand, 10085 - 10183
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||||  |||||||  |||||||||| | | ||| ||||  |||||||||||||| |||||||||||| |||||||||||||||||||    
T  10085 attttcaccatttcgcatgtaaaatttaaaccgttaatcggattttgatgccgttttcgcctacactctcctgacacttggctctatcataatctacag 10183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 106; Significance: 5e-53; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 82 - 335
Target Start/End: Complemental strand, 61841 - 61589
Alignment:
Q  82 aaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacc 181  Q
    |||| ||||||||||| ||| ||| ||| | ||||||| |||| || |||| ||||||| ||||||| || || |||||||| |||| ||| |||||| |    
T  61841 aaattcaaaccgttaatccgattttgatttcgttttcgtctacgcgttccttacacttaactctatcttattccacagaaaa-ttcatgttccaaccatc 61743  T
Q  182 caaatatcgatttccagaaccttgcataaacactcattttcaaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaacgactcaac 281  Q
    | || |   ||| ||  |||||  |||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  61742 ccaaaacaaattacccaaacctcacataaacacttattttcaaaatagttcacaatcgaagtttcacacgaaactctcgttttctcccaaaagactcaac 61643  T
Q  282 aaccattttcttaacgtcaaaacaaaaaattcaatttgtctaactcacccaaaa 335  Q
     ||||||||||||| ||||||||| |||||||||||||||||||| ||||||||    
T  61642 gaccattttcttaaagtcaaaacagaaaattcaatttgtctaacttacccaaaa 61589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 154654 - 154434
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| ||||||||||| ||||| ||  ||||| ||||||||||| ||    
T  154654 ttttcacaatttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttctcctacacgctcttgacatttgactctaacataatctaca-aa 154556  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  | |    
T  154555 aatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataatcacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 154456  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  154455 gttttctcccaaacgactcaac 154434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 113 - 335
Target Start/End: Complemental strand, 51759 - 51538
Alignment:
Q  113 gttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaac 212  Q
    ||||||| |||| || |||| ||||||||||||||| || || | |||||| |||| ||| |||||| || || |   ||| ||  |||||  |||||||    
T  51759 gttttcgtctacgcgttccttacacttagctctatcttattccatagaaaa-ttcatgttccaaccatcccaaaacaaattgcccaaacctcacataaac 51661  T
Q  213 actcattttcaaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaacgactcaacaaccattttcttaacgtcaaaacaaaaaatt 312  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||| ||||||||| ||||||    
T  51660 actcattttcaaaatagttcacaatcgaagtttcacacgaaactcttgttttctcccatatgactcaacaaccattttcttaaagtcaaaacagaaaatt 51561  T
Q  313 caatttgtctaactcacccaaaa 335  Q
    |||||||||||||||||||||||    
T  51560 caatttgtctaactcacccaaaa 51538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 63 - 196
Target Start/End: Original strand, 7304 - 7437
Alignment:
Q  63 tttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaa 162  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||  |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  7304 tttcacgttttcgtgcgtaaaatccaaaccattaacccgttttcgatgccgttttcgcctacacgctcttgacacttagatctatcataatctacagaaa 7403  T
Q  163 aattcaggtttcaaccacccaaatatcgatttcc 196  Q
    |||||| |||||||||||||||| ||||||||||    
T  7404 aattcaagtttcaaccacccaaaaatcgatttcc 7437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 64 - 197
Target Start/End: Complemental strand, 866 - 733
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||| | |||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  866 ttcacgttttcgcacataaaaatcaaaccgttaacccgttttcgatgtcgttttcgcctaaacgctcctgacacttagctctatcataatctatagaaaa 767  T
Q  164 attcaggtttcaaccacccaaatatcgatttcca 197  Q
    ||||| |||||||||||||||| |||||||||||    
T  766 attcaagtttcaaccacccaaaaatcgatttcca 733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 65 - 196
Target Start/End: Complemental strand, 35964 - 35833
Alignment:
Q  65 tcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaa 164  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  35964 tcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttatctctatcataatctacagaaata 35865  T
Q  165 ttcaggtttcaaccacccaaatatcgatttcc 196  Q
    |||| |||||||||| | ||||||||||||||    
T  35864 ttcaagtttcaaccatctaaatatcgatttcc 35833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 26 - 176
Target Start/End: Complemental strand, 18230 - 18080
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctaca 125  Q
    ||||||||||||||||||||||| ||| ||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||  |||||||||||||    
T  18230 cgatttctgcctgacagacaacatcagattttctaattttcacgtttacgcgcgtaaaaaccaaaccgttaacccgttttcgatgccgttttcgcctaca 18131  T
Q  126 cgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaa 176  Q
    ||||||||||||||||| | ||| |||| |||| ||||||| | |||||||    
T  18130 cgctcctgacacttagcccaatcttaatgtacataaaaattaaagtttcaa 18080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 21 - 272
Target Start/End: Complemental strand, 843 - 592
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| |||| |||||||||||||||||| ||| |||||||||||| ||||||| || ||||||| |||||| ||||| ||||||| ||||  ||||||||    
T  843 tagtccgatatctgcctgacagacaacatcagattttccaatttttacgtttttgcacgtaaaaaccaaacagttaatccgttttggatgccgttttcgc 744  T
Q  121 ctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaac-cacccaaatatcgatttccagaaccttgcataaacactcatt 219  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||   ||||||| ||  |||||| | |||| ||  ||||||||||    
T  743 ctacacgctcctgacacttagctctatcttaatgtacagaaaaattcaagtttcaacattcccaaat-tcattttccaaagccttaca-caacactcatt 646  T
Q  220 tt-caaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaa 272  Q
    || ||||| |||| | ||  ||| ||||| ||||||||| ||||||||||||||    
T  645 ttccaaaacggttaacaaatgaattttcaaacgaaactcccgttttctcccaaa 592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 21 - 278
Target Start/End: Original strand, 5352 - 5610
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| ||||||||||||||||||||||| ||| |||| |||||||||||||||||||| ||||| ||||||||||||||||||||| |||  ||||| ||    
T  5352 tagttcgatttctgcctgacagacaacatcagatttttcaattttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcaatgccgtttttgc 5451  T
Q  121 ctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattt 220  Q
    ||||| | ||||||||||||||||||||  ||  |||||||||||||  | |||||| |||| ||  ||  |||||| | |||| || ||||||||||||    
T  5452 ctacatgttcctgacacttagctctatctaaaagtacagaaaaattccag-ttcaacaaccccaaattcattttccaaagccttacacaaacactcattt 5550  T
Q  221 t--caaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaacgactc 278  Q
    |  ||||| |||| | ||| ||| |||||| ||||||||  | |||||||||||||||||    
T  5551 ttccaaaacggttaacaattgaattttcacccgaaactcctgatttctcccaaacgactc 5610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 1096 - 876
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  ||||||||| |||| ||||||||||||  ||||| ||||||||||| ||    
T  1096 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcccacacactcctgacacttgactctaacataatctaca-aa 998  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || | || | |||||||| |||||| |||  ||| || |||||  ||||| |||| |||  | |||||| || |  |||||  ||||||||||||  | |    
T  997 aattccatgcttcaaccatcccaaaaatcatttttcaaaacctcacataagcacttattggcgaaaatgcttaaacatcgacatttcacacgaaaaaccc 898  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  897 gttttctcccaaacgactcaac 876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 16526 - 16405
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| ||||| |||||||||||| |||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16526 ttcacgttttcgcgcataaaaaccaaaccgttaatccgttttcgataccgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 16427  T
Q  164 attcaggtttcaaccacccaaa 185  Q
    ||||| ||||||||||| ||||    
T  16426 attcaagtttcaaccacacaaa 16405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 64 - 196
Target Start/End: Complemental strand, 1038 - 906
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1038 ttcacgttttcgcgaataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacactcctgacacttagctctatcataatctacagaaaa 939  T
Q  164 attcaggtttcaaccacccaaatatcgatttcc 196  Q
    ||||| |||||||||| | ||| ||| ||||||    
T  938 attcaagtttcaaccaactaaaaatctatttcc 906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 38 - 226
Target Start/End: Complemental strand, 2447 - 2260
Alignment:
Q  38 gacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacac 137  Q
    ||||||||||| ||| ||| ||||  ||||||||||| ||| ||||| |||||||||||||||||||||||||  ||||||||||||| |||||| ||||    
T  2447 gacagacaacatcagattt-ccaaccttcacgttttctcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacatgctccttacac 2349  T
Q  138 ttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| ||| || |||||||  |||||  ||||| | || ||||||||||    
T  2348 ttagctctatcataatctatagaaaaattcaagtttcaaccacctaaaaattgatttcccaaacctcacataatctcttattttcaaaa 2260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 64 - 220
Target Start/End: Original strand, 72283 - 72439
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  72283 ttcacgttttcgcgcctaaaaatcaaaccgttaacccgttttcgatgccattttcgcctacgcgctcctgacacttagctctatcacaatctacagaaaa 72382  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattt 220  Q
    ||||  |||||||||||||||| |||| |||||| || ||  ||||| |||||||||    
T  72383 attcctgtttcaaccacccaaaaatcggtttccaaaatctcacataatcactcattt 72439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 64 - 190
Target Start/End: Original strand, 3519 - 3645
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||| | |||||  |||||||||||||| |||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3519 ttcacgttttcgcacataaaaatcaaaccgttaacccattttcgatgccgttttcgcctaaacgctcctgacacttagctctatcataatctacagaaaa 3618  T
Q  164 attcaggtttcaaccacccaaatatcg 190  Q
    ||||| |||||||||||||||| ||||    
T  3619 attcaagtttcaaccacccaaaaatcg 3645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 281
Target Start/End: Original strand, 30917 - 31137
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||||| |||||||||||  ||||| ||||||||| | ||    
T  30917 ttttcactatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacacgatcctgacacttgactctaacataatctata-aa 31015  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  | |    
T  31016 aatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataatcacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 31115  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  31116 gttttctcccaaacgactcaac 31137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 21 - 272
Target Start/End: Complemental strand, 23348 - 23096
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| ||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||  |||||| |    
T  23348 tagtccgatttctgcctgacagacaacatcaaattttccaattttcacgttttcgcgcgtaaaaaccaaaccgttaatccgttttcgatgccgttttcac 23249  T
Q  121 ctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattt 220  Q
    ||||  | || ||||||||||| ||||| |||| | |||||||||||| ||||||||   |||||  ||  |||||| | |||| ||  |||||||||||    
T  23248 ctacgtgttcatgacacttagccctatcttaatgtgcagaaaaattcaagtttcaacattccaaaattcattttccaaagccttaca-caacactcattt 23150  T
Q  221 t-caaaatggttcataatcgaagtttcacacgaaactctcg-ttttctcccaaa 272  Q
    | ||||| |||| | ||  ||| |||||| ||||||||||| ||||||||||||    
T  23149 tccaaaacggttaacaaatgaattttcacccgaaactctcgtttttctcccaaa 23096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 86; Significance: 5e-41; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 64 - 185
Target Start/End: Complemental strand, 938 - 817
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    |||||||||||| || ||||| |||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  938 ttcacgttttcgtgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacactcctgacacttagctctatcataatctacagaaaa 839  T
Q  164 attcaggtttcaaccacccaaa 185  Q
    ||| | |||||||||| |||||    
T  838 attaaagtttcaaccatccaaa 817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 64 - 166
Target Start/End: Complemental strand, 7688 - 7586
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    |||||||||||| || ||||| |||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7688 ttcacgttttcgtgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgcctacacactcctgacacttagctctatcataatctacagaaaa 7589  T
Q  164 att 166  Q
    |||    
T  7588 att 7586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 26364 - 26465
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacaga 160  Q
    ||||||||  ||||||||||||||| ||||||||||| |   ||| ||||  |||||||||||||||||||||||||||| |||||||||||||||||||    
T  26364 attttcaccatttcgcgcgtaaaattcaaaccgttaatcgaattttgatgccgttttcgcctacacgctcctgacacttaactctatcataatctacaga 26463  T
Q  161 aa 162  Q
    ||    
T  26464 aa 26465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 7382 - 7238
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||  |||| || |||||||||| |||||| |    
T  7382 tagtccgatttctgcctgacagacaacatcagattttccaattttcacgttttcgcgcgtaaaaaccaaacttttaatccattttcgatgtcgttttcac 7283  T
Q  121 ctacacgctcctgacacttagctctatcataatctacagaaaaat 165  Q
    ||||| |||||| ||||||||| ||||||||||  ||||||||||    
T  7282 ctacatgctcctaacacttagcactatcataatgcacagaaaaat 7238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 85; Significance: 2e-40; HSPs: 4)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 137
Target Start/End: Original strand, 15991 - 16107
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| |||||||||| |||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||  ||||||||    
T  15991 tagtccgatttctgcatgacagacaacatcagattttccaattttcacgttttctcgcgtaaaatccaaaccgttaacctgttttcgatgccgttttcgc 16090  T
Q  121 ctacacgctcctgacac 137  Q
    |||||||||||||||||    
T  16091 ctacacgctcctgacac 16107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 134 - 226
Target Start/End: Original strand, 19402 - 19494
Alignment:
Q  134 acacttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||| |||||| | ||| |||| |||| |||||    
T  19402 acacttagctctatcataatctacagaaaaattcatgtttcaaccacccaaaaatcggtttccataaccttacgtaatcacttatttgcaaaa 19494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 4944 - 5008
Alignment:
Q  26 cgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaa 90  Q
    |||||||||||| |||||||||| ||| |||||||||||||||||||||| ||||||||||||||    
T  4944 cgatttctgccttacagacaacatcagattttccaattttcacgttttcgagcgtaaaatccaaa 5008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 11066 - 11128
Alignment:
Q  28 atttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaa 90  Q
    |||||||||| |||||||||| ||| |||||||||||||| ||||||||||||||||||||||    
T  11066 atttctgccttacagacaacatcagattttccaattttcatgttttcgcgcgtaaaatccaaa 11128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 64 - 203
Target Start/End: Original strand, 18474 - 18613
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||| | |||||  |||||||||||||| |||||||||  ||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  18474 ttcacgttttcgcacataaaaatcaaaccgttaacccattttcgatgccgttttcgcctaaacactcctgacacttggctctatcataatctacagaaaa 18573  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaacct 203  Q
    ||||| |||||||||||||||| |||||| |||| |||||    
T  18574 attcaagtttcaaccacccaaaaatcgatctccaaaacct 18613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 84; Significance: 7e-40; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 37 - 196
Target Start/End: Complemental strand, 1717 - 1560
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgaca 136  Q
    |||||||||||| ||| ||||| ||  ||||| ||||||||| ||||| |||||||||||||||||||||||||   ||||||||||||||||||||| |    
T  1717 tgacagacaacatcagattttc-aaccttcacattttcgcgcataaaacccaaaccgttaacccgttttcgatgccattttcgcctacacgctcctgaga 1619  T
Q  137 cttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttcc 196  Q
    ||||||||||||||||||||| |||||| ||| |||||||||| ||||| ||||||||||    
T  1618 cttagctctatcataatctaccgaaaaactcaagtttcaacca-ccaaaaatcgatttcc 1560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 6898 - 6995
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctaca 158  Q
    ||||||||  ||||||||||||||| |||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  6898 attttcaccatttcgcgcgtaaaattcaaaccgttaacccattttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatctaca 6995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 117054 - 117216
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    |||||||||| |||| |||||  |||||||||||||||||| ||||| ||||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  117054 ttcacgtttttgcgcctaaaaatcaaaccgttaacccgtttacgatgctgttttcgcctacgcgctcctgacacatagctctatcacaatctacagaaaa 117153  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    ||||  ||||||||||||||||   || |||| | |||||  ||||| ||||||||| |||||    
T  117154 attccagtttcaaccacccaaaatacggtttctaaaacctcacataatcactcatttgcaaaa 117216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 78; Significance: 3e-36; HSPs: 4)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 37 - 226
Target Start/End: Complemental strand, 118254 - 118066
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgaca 136  Q
    |||||||||||| ||| ||||| ||  ||||| ||||||||| |||||  || ||||||||   ||||||||||| |||||| |||||| | |||| |||    
T  118254 tgacagacaacatcagattttc-aaccttcacattttcgcgcataaaaatcataccgttaatttgttttcgatgtcgttttcacctacatgttcctcaca 118156  T
Q  137 cttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||  ||||| |||| |||| |||||    
T  118155 cttagccctatcataatctacagaaaaattcaagtttcaaccacccaaaaatcgatttccaaaacctcacataatcacttatttgcaaaa 118066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 67 - 226
Target Start/End: Complemental strand, 113391 - 113232
Alignment:
Q  67 acgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaatt 166  Q
    |||||||||||| |||||| |||||| ||||   ||||||||||  |||||| |||||| | |||| ||||||||| |||||||||||||||||||||||    
T  113391 acgttttcgcgcataaaattcaaaccattaatttgttttcgatgccgttttcacctacatgttcctcacacttagccctatcataatctacagaaaaatt 113292  T
Q  167 caggtttcaaccacccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    || |||||||||||||||| ||||||||||||||| |  ||||| |||| |||| |||||    
T  113291 caagtttcaaccacccaaaaatcgatttccagaacatcacataatcacttatttgcaaaa 113232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 94393 - 94542
Alignment:
Q  28 atttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacg 127  Q
    ||||||||||||||||||||| ||| ||||||||||||||| ||||||||| ||||| ||||||| |||| ||||||||||||  |||||| |||||  |    
T  94393 atttctgcctgacagacaacatcagattttccaattttcacattttcgcgcataaaaaccaaacctttaatccgttttcgatgccgttttcacctacgtg 94492  T
Q  128 ctcctgacacttagctctatcataatctacagaaaaattcaggtttcaac 177  Q
     || ||||||||||| ||||| |||| | ||| |||||||| ||||||||    
T  94493 ttcatgacacttagccctatcttaatgtgcagcaaaattcaagtttcaac 94542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 124
Target Start/End: Complemental strand, 25491 - 25433
Alignment:
Q  66 cacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctac 124  Q
    ||||||||||||| |||||  ||||||||||| ||||||||||||  |||||| |||||    
T  25491 cacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctac 25433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 64 - 196
Target Start/End: Original strand, 8765 - 8896
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||  ||||||| |||||||||||||| || ||||||||||||||||||| |||||    
T  8765 ttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatgccgttttcgtctacacgctcctgagacatagctctatcataatctactgaaaa 8864  T
Q  164 attcaggtttcaaccacccaaatatcgatttcc 196  Q
    | ||| |||||||| | ||||| ||||||||||    
T  8865 actcaagtttcaacta-ccaaaaatcgatttcc 8896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 6613 - 6659
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatg 110  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||    
T  6613 ttcacgttttcgcgcataaaaaccaaaccgttaacccgttttcgatg 6659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 64 - 185
Target Start/End: Original strand, 3503 - 3624
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    |||| |||||||||  ||||| ||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| | |||||     
T  3503 ttcatgttttcgcgtataaaaaccaaatcgttaacccgttttcgatgccgttttcgcctacacgctcctgacacttagctctatcataatcaaaagaaat 3602  T
Q  164 attcaggtttcaaccacccaaa 185  Q
    ||||| |||||||| |||||||    
T  3603 attcaagtttcaactacccaaa 3624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 74; Significance: 7e-34; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 64 - 203
Target Start/End: Original strand, 4333 - 4469
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||| | |||||  ||||| |||||||||||||| |||  ||||| ||||| |||||   |||||||||||||||||||||||||||||||    
T  4333 ttcacgttttcgcacataaaaatcaaactgttaacccgttttcaatgccgtttttgcctaaacgct---gacacttagctctatcataatctacagaaaa 4429  T
Q  164 attcaggtttcaaccacccaaatatcgatttccagaacct 203  Q
    ||||| |||||||||||||||| ||||||||||| |||||    
T  4430 attcaagtttcaaccacccaaaaatcgatttccaaaacct 4469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 146982 - 147086
Alignment:
Q  21 tagtacgatttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgc 120  Q
    |||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||  |||||| |    
T  146982 tagtccgatttctgcctgacagacaacatcagattttccaattttcacgttttcgcacgtaaaatccaaatcgttaacccgttttcgatgccgttttcac 147081  T
Q  121 ctaca 125  Q
    |||||    
T  147082 ctaca 147086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 64 - 197
Target Start/End: Original strand, 817 - 949
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||||| |||||  ||||| ||||| | ||||||||||   ||||| |||||| |||||||||||||||| |||||||||||||||||||     
T  817 ttcacgttttcgcgcataaaaatcaaactgttaatctgttttcgatgcc-ttttcacctacatgctcctgacacttagccctatcataatctacagaaag 915  T
Q  164 attcaggtttcaaccacccaaatatcgatttcca 197  Q
    ||||| |||||||||||||||| |||||||||||    
T  916 attcaagtttcaaccacccaaaaatcgatttcca 949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 64 - 196
Target Start/End: Original strand, 5510 - 5641
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    |||||||||||| || ||||| |||||||||||||||||||||||||  ||||||| ||||| |||||||| || ||||||||||||||||||| |||||    
T  5510 ttcacgttttcgagcataaaaaccaaaccgttaacccgttttcgatgccgttttcgtctacatgctcctgagacatagctctatcataatctaccgaaaa 5609  T
Q  164 attcaggtttcaaccacccaaatatcgatttcc 196  Q
    | ||| |||||||| | ||||| ||||||||||    
T  5610 actcaagtttcaacta-ccaaaaatcgatttcc 5641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 64 - 196
Target Start/End: Complemental strand, 17672 - 17541
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    ||||||||||||  | |||||  ||||||||||||||||||||||||  |||||||||||||||||||| ||| ||||| ||||||||||||||| |||     
T  17672 ttcacgttttcgaacataaaaatcaaaccgttaacccgttttcgatgccgttttcgcctacacgctcctaaca-ttagccctatcataatctacaaaaag 17574  T
Q  164 attcaggtttcaaccacccaaatatcgatttcc 196  Q
    ||||| |||||||||||||||  ||||||||||    
T  17573 attcaagtttcaaccacccaataatcgatttcc 17541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 37 - 196
Target Start/End: Original strand, 3716 - 3874
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgaca 136  Q
    |||||||||||| ||| ||||| ||  |||| |||||||||| |||||  ||| |||||||   ||||||||||  ||||||||||||| | ||||||||    
T  3716 tgacagacaacatcagattttc-aaccttcatgttttcgcgcataaaaatcaatccgttaatgtgttttcgatgccgttttcgcctacatggtcctgaca 3814  T
Q  137 cttagctctatcataatctacagaaaaattcaggtttcaaccacccaaatatcgatttcc 196  Q
    |||||| ||||||||||||||||||| ||||| ||||||||||||| || ||||||||||    
T  3815 cttagccctatcataatctacagaaagattcaagtttcaaccaccccaaaatcgatttcc 3874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 14741 - 14818
Alignment:
Q  28 atttctgcctgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgtttt 105  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14741 atttctgcctgacagacaacatcatattttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgtttt 14818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 281
Target Start/End: Complemental strand, 16217 - 16048
Alignment:
Q  113 gttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaa 211  Q
    |||||||||||||||||| ||||||||  ||||| |||||||||||| ||| | ||  ||||||||| ||||||  ||  |||||| |||||  ||||||    
T  16217 gttttcgcctacacgctcgtgacacttgactctaacataatctacag-aaattccacatttcaaccatcccaaaagtcattttccaaaacctcacataaa 16119  T
Q  212 cactcatt-ttcaaaatggttcataatcgaagtttcacacgaaactctcgttttctcccaaacgactcaac 281  Q
    |||| |||  | |||| | || |  |||||  ||||||||||||  | |||||||||||||||||||||||    
T  16118 cacttattggtgaaaacgcttaaacatcgacatttcacacgaaaaacccgttttctcccaaacgactcaac 16048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 62 - 226
Target Start/End: Original strand, 8379 - 8543
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||||| |||||  |||  |||||||||||| ||||||||||||||| |||||||||| ||||||| |    
T  8379 ttttcaccatttcgcgcgtaaaattcaaaccgttaacctgttttaaatgccgttttcgcctacgcgctcctgacacttaactctatcatagtctacag-a 8477  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttcaaaa 226  Q
    || |||| |||||||||| |||||| |||  |||||| |||||  ||||| |||| |||| |||||    
T  8478 aatttcatgtttcaaccatcccaaaaatcattttccaaaacctcacataatcacttatttgcaaaa 8543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 37 - 272
Target Start/End: Complemental strand, 14214 - 13980
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgaca 136  Q
    |||||||||||| ||| ||||| | || | |||||||||||| |||||  ||||||||||| ||||||||||||  ||||||||||||| |||||| |||    
T  14214 tgacagacaacatcagattttcaacttct-acgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcgcctacatgctcctaaca 14116  T
Q  137 cttagctctatcataatctacagaaaaattcaggtttcaaccacc-caaatatcgatttccagaaccttgcataaacactcatttt-caaaatggttcat 234  Q
    |||||| ||||||||||  |||||||||| |  |||||||| ||| ||||| ||  ||| || |||||  || ||||||||||||| ||||| |||| |     
T  14115 cttagcactatcataatgcacagaaaaatcccagtttcaacaacctcaaat-tcattttaca-aacctcacacaaacactcattttccaaaacggttaac 14018  T
Q  235 aatcgaagtttcacacgaaactctcgttttctcccaaa 272  Q
    ||  ||| ||||| ||||||||| ||||||||||||||    
T  14017 aaatgaattttcaaacgaaactcccgttttctcccaaa 13980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 37 - 182
Target Start/End: Original strand, 76788 - 76932
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgaca 136  Q
    |||||||||||| ||| ||||| ||  ||||||||||||||| |||||  ||||||||||| | ||||||||||  |||||| |||||| | || |||||    
T  76788 tgacagacaacatcagattttc-aaccttcacgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgccgttttcacctacatgttcttgaca 76886  T
Q  137 cttagctctatcataatctacagaaaaattcaggtttcaaccaccc 182  Q
    |||||| |||||||||| |||||||||||||| |||||||| ||||    
T  76887 cttagccctatcataatgtacagaaaaattcaagtttcaacaaccc 76932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 281
Target Start/End: Original strand, 16068 - 16288
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||| |||||||||||||||||||||||||||  ||||| ||||||||||| ||    
T  16068 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgtcgttttcgcctacacgctcctgacacttgactctaacataatctaca-aa 16166  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || | || |||||||||| ||||||  ||  |||||| |||||  |||||||||| |||  | ||||   || |  |||||  ||||||||||||  | |    
T  16167 aattccatgtttcaaccatcccaaaagtcattttccaaaacctcacataaacacttattggcgaaaacacttaaacatcgacatttcacacgaaaaaccc 16266  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  16267 gttttctcccaaacgactcaac 16288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 37 - 165
Target Start/End: Complemental strand, 10334 - 10207
Alignment:
Q  37 tgacagacaacaacagtttttccaattttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgaca 136  Q
    |||||||||||| ||| ||||||||||| |||||||||  || |||||  ||||||||||| ||||||||||||  |||||| |||||| |||||| |||    
T  10334 tgacagacaacaccagattttccaattt-cacgttttcctgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacatgctcctaaca 10236  T
Q  137 cttagctctatcataatctacagaaaaat 165  Q
    |||||| ||||||||||  ||||||||||    
T  10235 cttagcactatcataatgcacagaaaaat 10207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 57; Significance: 9e-24; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 71 - 281
Target Start/End: Original strand, 79321 - 79532
Alignment:
Q  71 tttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcagg 170  Q
    ||||||||||||||| ||||| ||||| ||| ||| ||||  |||||||||||||||||||| ||||||  ||||| ||||||||||| |||| |||| |    
T  79321 tttcgcgcgtaaaattcaaactgttaatccgattttgatgccgttttcgcctacacgctcctaacacttgactctaacataatctaca-aaaatttcatg 79419  T
Q  171 tttcaacc-acccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctcgttttctcc 268  Q
    |||||||| |||||||  ||  |||||| |||||  |||||||||| |||  | |||| | || |  |||||  ||||||||||||  | ||||||||||    
T  79420 tttcaaccaacccaaaagtcattttccaaaacctcacataaacacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaacccgttttctcc 79519  T
Q  269 caaacgactcaac 281  Q
    |||||||||||||    
T  79520 caaacgactcaac 79532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 40134 - 40250
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| |||| |||||| | | ||| ||||| |||||||||||||||||||||||||||  ||||| ||||||||||| ||    
T  40134 ttttcaccatttcgcgcgtaaaattcaaaacgttaatcggattttgatgtcgttttcgcctacacgctcctgacacttgactctaacataatctaca-aa 40232  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  40233 aatttcatgtttcaacca 40250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 45617 - 45733
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| |||| |||||| | | ||| ||||| |||||||||||||||||||||||||||  ||||| ||||||||||| ||    
T  45617 ttttcaccatttcgcgcgtaaaattcaaatcgttaatcggattttgatgtcgttttcgcctacacgctcctgacacttgactctaacataatctaca-aa 45715  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  45716 aatttcatgtttcaacca 45733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 166890 - 166773
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||| ||||||| | | ||| ||||  |||||||||||||||||||||||||||  ||||| ||||||||||| ||    
T  166890 ttttcaccatttcgcgcgtaaaattcaagccgttaatcagattttgatgccgttttcgcctacacgctcctgacacttgactctaacataatctacaaaa 166791  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  166790 aatttcatgtttcaacca 166773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 51831 - 51926
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatcta 156  Q
    ||||||||  ||||||||||||||| | ||||||||| | | ||||||||  |||||||||||||| |||||||||||| ||||||||||||||||    
T  51831 attttcaccatttcgcgcgtaaaattccaaccgttaatcggatttcgatgccgttttcgcctacactctcctgacacttggctctatcataatcta 51926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 61 - 159
Target Start/End: Original strand, 6672 - 6770
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||||||||||||| ||||||||||| | | ||| ||||   ||||||||||||| |||||||||||| |||||||||||||||||||    
T  6672 attttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgccattttcgcctacactctcctgacacttggctctatcataatctacag 6770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 51; Significance: 4e-20; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 61 - 162
Target Start/End: Complemental strand, 11184 - 11082
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgt-tttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||||||||||||| ||||||||||| | |  ||| ||||  |||||||||||||| |||||||||||| |||||||||||||||||||    
T  11184 attttcaccatttcgcgcgtaaaattcaaaccgttaatcggaattttgatgccgttttcgcctacactctcctgacacttggctctatcataatctacag 11085  T
Q  160 aaa 162  Q
    |||    
T  11084 aaa 11082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 160 - 60
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||| ||||| | | ||| ||||  |||||||||||||| |||||||||| | |||||||||||||||||||||    
T  160 ttttcaccatttcgcgcgtaaaattcaaactgttaatcagattttgatgccgttttcgcctacactctcctgacacatggctctatcataatctacagaa 61  T
Q  162 a 162  Q
    |    
T  60 a 60  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 5464 - 5364
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||| ||||| | | ||| ||||  |||||||||||||| |||||||||| | |||||||||||||||||||||    
T  5464 ttttcaccatttcgcgcgtaaaattcaaactgttaatcagattttgatgccgttttcgcctacactctcctgacacatggctctatcataatctacagaa 5365  T
Q  162 a 162  Q
    |    
T  5364 a 5364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 6803 - 6690
Alignment:
Q  64 ttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaa 163  Q
    |||| |||||||||| |||||  ||||||||||| | ||||||||||| ||||||  ||||| | ||||||||||||||   |||||| |||||||||||    
T  6803 ttcatgttttcgcgcataaaaatcaaaccgttaatctgttttcgatgtcgttttcaactacatgttcctgacacttagcatcatcatattctacagaaaa 6704  T
Q  164 attcaggtttcaac 177  Q
    ||||| ||||||||    
T  6703 attcaagtttcaac 6690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 29605 - 29706
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacaga 160  Q
    ||||||||  ||||||||||||||| | ||||||||| | | ||| | ||| ||||||||||||||||||||||||||  |||||||| |||||||||||    
T  29605 attttcaccatttcgcgcgtaaaattccaaccgttaatcggattttggtgtcgttttcgcctacacgctcctgacactaggctctatcttaatctacaga 29704  T
Q  161 aa 162  Q
    ||    
T  29705 aa 29706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 35070 - 35171
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacaga 160  Q
    ||||||||  ||||||||||||||| | ||||||||| | | ||| | ||| ||||||||||||||||||||||||||  |||||||| |||||||||||    
T  35070 attttcaccatttcgcgcgtaaaattccaaccgttaatcggattttggtgtcgttttcgcctacacgctcctgacactaggctctatcttaatctacaga 35169  T
Q  161 aa 162  Q
    ||    
T  35170 aa 35171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 61 - 159
Target Start/End: Complemental strand, 814 - 716
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    ||||||||  ||||||||||||||| ||||  ||||| | | ||| ||||  |||||||||||||| |||||||||||| |||||||||||||||||||    
T  814 attttcaccatttcgcgcgtaaaattcaaattgttaatcggattttgatgccgttttcgcctacactctcctgacacttggctctatcataatctacag 716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 28173 - 28271
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacaga 160  Q
    |||||||  |||||||| |||||| ||||||||||| | | |||  |||  ||||||||||||| |||||||||||||| |||||||||||||||||||    
T  28173 ttttcaccatttcgcgcataaaattcaaaccgttaatcggattttaatgccgttttcgcctacatgctcctgacacttaactctatcataatctacaga 28271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 31926 - 31810
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||| |||||||||||||| |||||| |||||  ||||| ||||||||||| ||    
T  31926 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcagattttgatgtcgttttcgcctacacactcctgtcacttgactctaacataatctaca-aa 31828  T
Q  162 aaattcaggtttcaacca 179  Q
    |  |||| ||||||||||    
T  31827 attttcatgtttcaacca 31810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 35113 - 35214
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacaga 160  Q
    ||||||||  ||||| ||||||||| ||||||||||| |   ||| ||||  |||||||||||||||| |||||||||| |||||||||||||||| |||    
T  35113 attttcaccatttcgtgcgtaaaattcaaaccgttaatcgaattttgatgccgttttcgcctacacgcccctgacacttggctctatcataatctataga 35212  T
Q  161 aa 162  Q
    ||    
T  35213 aa 35214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 40918 - 41034
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||| |||||||||||||| |||||| |||||  ||||| ||||||||||| ||    
T  40918 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcagattttgatgtcgttttcgcctacacactcctgtcacttgactctaacataatctaca-aa 41016  T
Q  162 aaattcaggtttcaacca 179  Q
    |  |||| ||||||||||    
T  41017 attttcatgtttcaacca 41034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 19705 - 19589
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||| ||||||| ||||||||||| | | ||| ||||  |||||||||||||||||||||||||||  ||||| ||||||||||| ||    
T  19705 ttttcaccatttcgcgtgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgctcctgacacttgactctaacataatctaca-aa 19607  T
Q  162 aaattcaggtttcaacca 179  Q
    || | || ||||||||||    
T  19606 aattccacgtttcaacca 19589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 177
Target Start/End: Complemental strand, 1780 - 1666
Alignment:
Q  63 tttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaa 162  Q
    |||||||||||||||| |||||  ||||||||||| ||||||||||||  |||||| |||||  | || ||||||||||| ||||   | | ||||||||    
T  1780 tttcacgttttcgcgcataaaaatcaaaccgttaatccgttttcgatgccgttttcacctacttgttcatgacacttagccctatatcagtgtacagaaa 1681  T
Q  163 aattcaggtttcaac 177  Q
    |||||| ||||||||    
T  1680 aattcaagtttcaac 1666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 6730 - 6613
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  ||||||||||||||| |||||||||||  ||||| | ||||||||  ||    
T  6730 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttttcgcctacacgttcctgacacttgactctaacttaatctaccaaa 6631  T
Q  162 aaattcaggtttcaacca 179  Q
    |  |||| ||||||||||    
T  6630 attttcatgtttcaacca 6613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 2256 - 2175
Alignment:
Q  78 cgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacag 159  Q
    |||||||| ||||||||||| |   ||| ||||  || |||||||||||||||||||||||| |||||||||||||||||||    
T  2256 cgtaaaattcaaaccgttaatcgaattttgatgccgtcttcgcctacacgctcctgacacttggctctatcataatctacag 2175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 61 - 158
Target Start/End: Original strand, 21606 - 21703
Alignment:
Q  61 attttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctaca 158  Q
    ||||||||  |||| |||||||||| ||||||||||| | | ||| | | | |||||||||| |||||||||||||||| |||||||| |||||||||    
T  21606 attttcaccatttcacgcgtaaaattcaaaccgttaatcggattttggtctcgttttcgcctccacgctcctgacacttggctctatcttaatctaca 21703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 281
Target Start/End: Original strand, 38711 - 38931
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||||| |||||| | |||||||||||  ||||| ||||||||| | ||    
T  38711 ttttcaccatttcgcgcgtaaaatgcaaaccgttaatcggattttgatgccgttttcacctacatgatcctgacacttgactctaacataatctata-aa 38809  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacactcattttc-aaaatggttcataatcgaagtttcacacgaaactctc 259  Q
    || |||| |||||||||| ||||||  ||  |||||| |||||  ||||| |||| |||  | |||| | || |  |||||  ||||||||||||  | |    
T  38810 aatttcatgtttcaaccatcccaaaagtcattttccaaaacctcacataatcacttattggcgaaaacgcttaaacatcgacatttcacacgaaaaaccc 38909  T
Q  260 gttttctcccaaacgactcaac 281  Q
    ||||||||||||||||||||||    
T  38910 gttttctcccaaacgactcaac 38931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 179
Target Start/End: Original strand, 33125 - 33232
Alignment:
Q  71 tttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcagg 170  Q
    |||||||||||||||   ||||||||| | | ||| |||||  ||||||||||||||||||||||||||  ||||| ||||||||||| |||| | || |    
T  33125 tttcgcgcgtaaaattggaaccgttaatcggattttgatgtcattttcgcctacacgctcctgacacttgactctaacataatctaca-aaaattacatg 33223  T
Q  171 tttcaacca 179  Q
    |||||||||    
T  33224 tttcaacca 33232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 2125 - 2060
Alignment:
Q  113 gttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaacca 179  Q
    |||||||||||||||||||||||||||  ||||| |||||||||||| ||| |||| ||||||||||    
T  2125 gttttcgcctacacgctcctgacacttgactctaacataatctacag-aaatttcatgtttcaacca 2060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 9270 - 9205
Alignment:
Q  113 gttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttcaacca 179  Q
    |||||||||||||||||||||||||||  ||||| |||||||||||| ||| |||| ||||||||||    
T  9270 gttttcgcctacacgctcctgacacttgactctaacataatctacag-aaatttcatgtttcaacca 9205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 215
Target Start/End: Complemental strand, 3401 - 3248
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  |||||||||||||||  |||||||||| | | ||| ||||   |||||||||||| ||||||||||||| | | ||||||||||| ||| |    
T  3401 ttttcaccatttcgcgcgtaaaatttaaaccgttaatcggattttgatgccattttcgcctacatgctcctgacacttggatttatcataatcttcag-a 3303  T
Q  162 aaattcaggtttcaacca-cccaaatatcgatttccagaaccttgcataaacact 215  Q
    || |||| |||||||||| |||||  |||  |||||| |||||  ||||||||||    
T  3302 aatttcaagtttcaaccatcccaataatcattttccaaaacctcacataaacact 3248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 10763 - 10652
Alignment:
Q  66 cacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaat 165  Q
    |||||||| |||| |||||  ||||||||||| ||||||| ||||  |||||| |||||  | || ||||||||||| ||||| |||| | ||||||||     
T  10763 cacgtttttgcgcataaaaatcaaaccgttaatccgtttttgatgccgttttcacctacttgttcatgacacttagccctatcttaatgtgcagaaaaag 10664  T
Q  166 tcaggtttcaac 177  Q
    ||| ||||||||    
T  10663 tcaagtttcaac 10652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 1954 - 1839
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||| |||||||||||||||||||||   ||| | ||||||||| || |    
T  1954 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttt-cgcctacacgctcctgacactagactccaacataatctagag-a 1857  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  1856 aatttcatgtttcaacca 1839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 179
Target Start/End: Complemental strand, 10209 - 10094
Alignment:
Q  62 ttttcacgttttcgcgcgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaa 161  Q
    |||||||  ||||||||||||||| ||||||||||| | | ||| ||||  |||| |||||||||||||||||||||   ||| | ||||||||| || |    
T  10209 ttttcaccatttcgcgcgtaaaattcaaaccgttaatcggattttgatgccgttt-cgcctacacgctcctgacactagactccaacataatctagag-a 10112  T
Q  162 aaattcaggtttcaacca 179  Q
    || |||| ||||||||||    
T  10111 aatttcatgtttcaacca 10094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 174
Target Start/End: Complemental strand, 1639 - 1543
Alignment:
Q  78 cgtaaaatccaaaccgttaacccgttttcgatgttgttttcgcctacacgctcctgacacttagctctatcataatctacagaaaaattcaggtttc 174  Q
    |||||||| | ||| ||||| ||||||| |||  ||||||| | ||| || ||||||||||||||||||| | | |||| |||||||| || |||||    
T  1639 cgtaaaattctaactgttaatccgtttttgattctgttttctcttacgcgttcctgacacttagctctataacattctaaagaaaaatccaagtttc 1543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University