View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10481A_low_223 (Length: 292)
Name: NF10481A_low_223
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10481A_low_223 |
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Alignment Details
Target: chr8 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 12 - 286
Target Start/End: Complemental strand, 31524217 - 31523943
Alignment:
| Q |
12 |
agaaggagggagggttaagtttgtgagtgcggatttgatgaaaggtatggagtggcgcattgttagaaagatgcgggtgcagacggtggcggagacgggg |
111 |
Q |
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|||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31524217 |
agaaggagggagggttaagtttgtgagtgcagatttgatggaaggtatggaatggcgcattgttagaaagatgcgggtgcagacggtggcggagacgggg |
31524118 |
T |
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| Q |
112 |
aggagggaggaaatgtttggtgatgggatttggatgatgttgtagagtgaggggttggtggctgatttgagaatatgagattcagtgtgtgaggtttgag |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31524117 |
aggagggaggaaatgtttggtgatgggatttggatgatgttgtagagtgaggggttggtggctgatttgagaatatgagattcagtgtgtgaggtttgag |
31524018 |
T |
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| Q |
212 |
aagtgatggcgaggattgtgagtttgaaattgtggtggatttggaagcgtttagctagctcgatgataggcatga |
286 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31524017 |
aagtgatggcgaggattgtgagtttgaaattgtggtggatttggaagcgtttagctagctcgatgataggcatga |
31523943 |
T |
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