View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10481A_low_249 (Length: 284)
Name: NF10481A_low_249
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10481A_low_249 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 5739126 - 5739419
Alignment:
| Q |
1 |
ggttatctttgtactatcactctattttatactttgaaaccaattgagtgaccaagtatttgatagattacatgacaattcttttttaggggaagaaatt |
100 |
Q |
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| T |
5739126 |
ggttatctttgtactatcactctattttatactttgaaaccaattgagtgaccaagtatttgatagattacatgacaattcttttttaggggaagaaact |
5739225 |
T |
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| Q |
101 |
caaatcattccattagataaatagtgagagatataaggtggtacatcaataaacaatt----------gagttagtttttaatggattgtctgtcctaaa |
190 |
Q |
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| T |
5739226 |
caaatcattccattagataaatagtgagagatataaggtggtacatcaataaacaattgagagattgagagttagtttttaatgggttgtctgtcctaac |
5739325 |
T |
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| Q |
191 |
tcataagcgacctcaattgtttaccttcggttaaactcaaccaaagagttgttaaatgacaaacctaacaattgtatacgttgctaaataatga |
284 |
Q |
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| T |
5739326 |
tcataagcgacctcaattgcttgccttcggttaaactcaaccaaagagttgttaaatgacaaacctaacaattgtatacgttgttaaataatga |
5739419 |
T |
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