View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10481A_low_251 (Length: 284)
Name: NF10481A_low_251
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10481A_low_251 |
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Alignment Details
Target: chr1 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 7 - 279
Target Start/End: Original strand, 37726066 - 37726338
Alignment:
| Q |
7 |
acttaaaccataaaacactctactgccacctaggatgttaactagagtatctaaatagacaacttacttacaagattacacttgttacccaagtaaatca |
106 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37726066 |
acttaaaccataaaacactctactgccacctaggatgttaactagagtatctaaatagacaacttacttacaagattacacttgttacccaagtaaatca |
37726165 |
T |
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| Q |
107 |
actttgactgacttgttcatttcgaaatcaccttgacagcagaaaattgtgtccttcatataaagacttcattattcaggtgtcttagtattaagatttt |
206 |
Q |
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|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
37726166 |
actttggctgacttgtttatttcgaaatcaccttgacagcagaaaattgtgtccttcatataaagacttcatcattcaggtgtcttagtattaagatttt |
37726265 |
T |
|
| Q |
207 |
cctagtactagaaacactgacacctaaaaactagctaattaggagctgcaagaaaacccaatcaacaccatac |
279 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |
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| T |
37726266 |
cctagtactagaaacactgacacctaaaaactagctaattaggagctgcaagaaaaccgtatcaacacaatac |
37726338 |
T |
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