View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10481A_low_255 (Length: 283)
Name: NF10481A_low_255
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10481A_low_255 |
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Alignment Details
Target: chr7 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 15961442 - 15961708
Alignment:
| Q |
1 |
tcaaattaagttcttgaattttaagtggcagacatgaggcattcaaattttcttttgcttatgcacttgccttgttttgttttagcttatttctttaatg |
100 |
Q |
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| T |
15961442 |
tcaaattaagttcttgaattttaagtggcagacatgaggcatttaaattttcttttgcttatgcacttgccttgttttgttttagcttatttctttaatg |
15961541 |
T |
|
| Q |
101 |
gtttgttcagaagtgtattgcttggtgctccgttagatgaggatttttctcccatcttactattatttttctctttggccaaactagtattagtttgaca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15961542 |
gtttgttcagaagtgtattgcttggtgctccgttagatgaggatttttctcccatcttactattatttttctctttggccaaactagtattagtttgaca |
15961641 |
T |
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| Q |
201 |
agagaagattgatcatcatgaaagagcattgaattatgatggttgagaaagaaatgaccaatttgca |
267 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15961642 |
agagaagattgatcatcatgtaagagcattgaattatgatggttgagaaagaaatgaccaatttgca |
15961708 |
T |
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