View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10481A_low_285 (Length: 274)
Name: NF10481A_low_285
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10481A_low_285 |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 2 - 268
Target Start/End: Original strand, 9665284 - 9665549
Alignment:
| Q |
2 |
cgagtttggtgttaacatccaagtccaacaacttaatctgcttcattcttactagaaaagaaaagtatactataaaattaaaagacataatcaaaaattg |
101 |
Q |
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||||| || |||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |
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| T |
9665284 |
cgagtatgctgttaacatccaagtccagcaacttagtctgctacattcttactagaaaagaaaagtatactataaaattgaaagacataataaaaaatta |
9665383 |
T |
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| Q |
102 |
aacaacagtaaattttctgaaactccaatttcattccaaaaacagaatcatggaaattgtgactctgttcttacctttcttcctagtgaagcttgttctg |
201 |
Q |
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|||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9665384 |
aacaac-gtaaattttctgaaactccaatttcaatctaaaaacagaatcatggaaattgtgactctgttcttacctttcttcctagtgaagcttgttctg |
9665482 |
T |
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| Q |
202 |
aaattaaagtattcaaattccattattacaagtcgtctctttcaagcaacgttccactactaccatc |
268 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9665483 |
aaattaaagtattcaaattccattattacaagtcgtctctttcaagcaacgttccactactaccatc |
9665549 |
T |
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