View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10481A_low_292 (Length: 271)
Name: NF10481A_low_292
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10481A_low_292 |
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Alignment Details
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 41778421 - 41778157
Alignment:
| Q |
1 |
aatatcaaatgtatgaaggttcaggttttgtttttacaataatatggttaaaggcatctggttaaactatttgagctatgttttgcaaaaatgtataata |
100 |
Q |
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| T |
41778421 |
aatatcaaatgtatgaaggttcaggttttgtttttacaataatatggttaaaggcatctgtttaaactatttgagctatgttttgcaaaaatgtataata |
41778322 |
T |
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| Q |
101 |
gtacaaaccataaatttgcacatgatcggttcacttaaactcaagctacttcaaaaagaaaatagatgataatttcttcactttgcatagaaacacttta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |
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| T |
41778321 |
gtacaaaccataaatttgcacatgatcggttcacttaaactcaagctacttcaaaaagaaaatagatgataatttcttcactttgcattgaaacacttca |
41778222 |
T |
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| Q |
201 |
agccattagaaatgctgctaataataccattatgttcatttctttgctcattgctttcatttgtt |
265 |
Q |
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| T |
41778221 |
agccattagaaatgctgctaataataccattattttcatttctttgctcattgctttcatttgtt |
41778157 |
T |
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