View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10481A_low_305 (Length: 267)
Name: NF10481A_low_305
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10481A_low_305 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 27315666 - 27315932
Alignment:
| Q |
1 |
aaataacaaaaagtaaccccatttgcttctacaccttcaaaacacatcctagcgtaaaatccaagcaactcttcaacttccacacaacccatttcacaaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27315666 |
aaataacaaaaagtaaccccatttgcttctacaccttcaaaacacatcctagcgtaaaatccaagcaactcttcaacttccacacaacccatttcacaaa |
27315765 |
T |
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| Q |
101 |
acccacgaaacatcacattccacacacccaaatttctctctgacaactcatcaaacaacttcagtgcaaccccacttagcccaagattcatatagaaccc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27315766 |
acccacgaaacatcacattccacacacccaaatttctctctgacaactcatcaaacaacttcagtgcaaccccacttagcccaagattcatatagaaccc |
27315865 |
T |
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| Q |
201 |
aacaagtgcaccaccaacaaacacattattcaaaaatccaaactttacaaccctagaatgaacctga |
267 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27315866 |
aacaagtgcaccaccaacaaacacattattcaaaaatccaaactttacaaccctagaatgaacctga |
27315932 |
T |
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