View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10481A_low_313 (Length: 265)

Name: NF10481A_low_313
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10481A_low_313
NF10481A_low_313
[»] chr3 (48 HSPs)
chr3 (140-248)||(25093477-25093585)
chr3 (127-215)||(45451561-45451649)
chr3 (135-215)||(55401083-55401163)
chr3 (140-216)||(32804520-32804592)
chr3 (170-248)||(11658790-11658868)
chr3 (106-203)||(40993277-40993374)
chr3 (158-215)||(49505148-49505205)
chr3 (172-216)||(16192758-16192802)
chr3 (159-215)||(20691327-20691383)
chr3 (171-215)||(48202276-48202320)
chr3 (172-215)||(11313808-11313851)
chr3 (155-213)||(8789541-8789599)
chr3 (169-215)||(9789126-9789172)
chr3 (179-217)||(17568698-17568736)
chr3 (177-243)||(47362542-47362608)
chr3 (158-215)||(7928458-7928515)
chr3 (182-222)||(5339109-5339149)
chr3 (175-215)||(9624649-9624689)
chr3 (135-215)||(10954960-10955040)
chr3 (172-248)||(23184080-23184156)
chr3 (172-215)||(3587341-3587384)
chr3 (169-248)||(11665919-11665998)
chr3 (184-227)||(19730229-19730272)
chr3 (170-225)||(21161505-21161560)
chr3 (160-215)||(40150567-40150622)
chr3 (169-215)||(8039840-8039886)
chr3 (150-204)||(8842348-8842402)
chr3 (164-234)||(13807158-13807228)
chr3 (172-250)||(25652039-25652117)
chr3 (169-215)||(28576724-28576770)
chr3 (155-205)||(35222956-35223006)
chr3 (172-237)||(37991495-37991560)
chr3 (179-248)||(3610608-3610677)
chr3 (158-215)||(8383265-8383322)
chr3 (159-216)||(10268481-10268538)
chr3 (159-215)||(11251986-11252040)
chr3 (172-217)||(15314884-15314929)
chr3 (158-247)||(16000010-16000099)
chr3 (155-216)||(24633392-24633453)
chr3 (178-215)||(27277852-27277889)
chr3 (159-215)||(33331938-33331995)
chr3 (170-215)||(41319316-41319361)
chr3 (176-213)||(51138316-51138353)
chr3 (170-215)||(52369783-52369828)
chr3 (169-209)||(17052378-17052418)
chr3 (176-216)||(21419467-21419507)
chr3 (135-248)||(28917976-28918091)
chr3 (171-215)||(37077366-37077410)
[»] chr7 (59 HSPs)
chr7 (143-258)||(14077413-14077528)
chr7 (143-258)||(14387441-14387556)
chr7 (169-247)||(7328696-7328774)
chr7 (118-215)||(27093367-27093464)
chr7 (118-215)||(27184837-27184934)
chr7 (179-256)||(6028592-6028669)
chr7 (135-215)||(20549799-20549879)
chr7 (149-215)||(5835255-5835321)
chr7 (159-216)||(38143230-38143287)
chr7 (143-215)||(21880160-21880232)
chr7 (118-213)||(3554460-3554555)
chr7 (169-248)||(15902797-15902876)
chr7 (169-248)||(26329387-26329466)
chr7 (143-256)||(598175-598288)
chr7 (158-215)||(3721101-3721158)
chr7 (158-215)||(13579468-13579525)
chr7 (146-255)||(26733272-26733381)
chr7 (135-215)||(8234154-8234234)
chr7 (144-244)||(22484004-22484104)
chr7 (169-215)||(38134411-38134457)
chr7 (156-205)||(18213025-18213074)
chr7 (169-250)||(19206023-19206104)
chr7 (143-216)||(27732223-27732291)
chr7 (154-215)||(42720880-42720941)
chr7 (172-216)||(5233636-5233680)
chr7 (176-248)||(5235961-5236033)
chr7 (172-212)||(17307904-17307944)
chr7 (170-214)||(19930947-19930991)
chr7 (158-258)||(21826238-21826338)
chr7 (168-212)||(41360921-41360965)
chr7 (169-216)||(1433461-1433508)
chr7 (172-215)||(8160424-8160467)
chr7 (169-243)||(21139001-21139072)
chr7 (160-215)||(24146824-24146879)
chr7 (169-248)||(27945016-27945095)
chr7 (176-247)||(48246825-48246896)
chr7 (169-215)||(3520347-3520393)
chr7 (155-213)||(9482944-9483002)
chr7 (173-215)||(16341504-16341546)
chr7 (169-247)||(22602715-22602793)
chr7 (154-215)||(1401033-1401094)
chr7 (169-258)||(4008569-4008658)
chr7 (169-258)||(4013961-4014050)
chr7 (158-215)||(11061070-11061127)
chr7 (170-215)||(12278843-12278888)
chr7 (171-248)||(22868017-22868094)
chr7 (126-215)||(25481910-25481999)
chr7 (134-215)||(32287433-32287514)
chr7 (106-163)||(32308191-32308248)
chr7 (172-217)||(35297680-35297725)
chr7 (169-213)||(2948693-2948737)
chr7 (171-215)||(4909159-4909203)
chr7 (164-216)||(7438713-7438765)
chr7 (144-217)||(7973103-7973178)
chr7 (169-217)||(9408339-9408387)
chr7 (160-248)||(17285039-17285127)
chr7 (171-215)||(17851439-17851483)
chr7 (151-247)||(26022536-26022632)
chr7 (171-215)||(32308128-32308172)
[»] chr5 (39 HSPs)
chr5 (136-215)||(30502360-30502439)
chr5 (136-215)||(30542703-30542782)
chr5 (118-215)||(32630689-32630786)
chr5 (143-215)||(23012387-23012459)
chr5 (147-213)||(18421824-18421890)
chr5 (172-258)||(19293431-19293517)
chr5 (169-215)||(36838551-36838597)
chr5 (106-215)||(28588616-28588725)
chr5 (169-242)||(32444747-32444820)
chr5 (155-215)||(16203786-16203846)
chr5 (173-236)||(41600885-41600948)
chr5 (143-212)||(15086482-15086552)
chr5 (164-213)||(14873527-14873576)
chr5 (170-215)||(18607103-18607148)
chr5 (155-215)||(12927662-12927722)
chr5 (171-215)||(27144471-27144515)
chr5 (175-215)||(35017045-35017085)
chr5 (149-205)||(42029770-42029826)
chr5 (170-225)||(5616218-5616273)
chr5 (172-215)||(6471897-6471940)
chr5 (169-240)||(16374347-16374418)
chr5 (159-210)||(17482473-17482524)
chr5 (177-216)||(30098333-30098372)
chr5 (172-215)||(38749571-38749614)
chr5 (169-215)||(3966511-3966557)
chr5 (169-215)||(8420035-8420081)
chr5 (169-215)||(11685947-11685993)
chr5 (169-215)||(17925177-17925223)
chr5 (169-215)||(19737487-19737533)
chr5 (169-215)||(22423817-22423863)
chr5 (170-248)||(25863179-25863257)
chr5 (174-215)||(2577190-2577231)
chr5 (174-215)||(16881144-16881185)
chr5 (170-215)||(41091263-41091308)
chr5 (171-215)||(9449477-9449521)
chr5 (169-209)||(15874207-15874247)
chr5 (135-215)||(21576716-21576796)
chr5 (171-211)||(41558661-41558701)
chr5 (143-215)||(42893368-42893440)
[»] scaffold0022 (2 HSPs)
scaffold0022 (143-248)||(90818-90923)
scaffold0022 (172-215)||(99901-99944)
[»] chr8 (47 HSPs)
chr8 (143-216)||(33405363-33405436)
chr8 (162-248)||(4298884-4298970)
chr8 (155-243)||(14134679-14134767)
chr8 (160-215)||(12606825-12606880)
chr8 (175-249)||(13018255-13018329)
chr8 (169-215)||(31236582-31236628)
chr8 (171-216)||(8798838-8798883)
chr8 (135-248)||(20873044-20873157)
chr8 (135-215)||(3025559-3025639)
chr8 (176-248)||(13203616-13203688)
chr8 (159-215)||(13844591-13844647)
chr8 (171-215)||(20785472-20785516)
chr8 (172-215)||(3508060-3508103)
chr8 (154-217)||(4786328-4786391)
chr8 (172-215)||(14731720-14731763)
chr8 (169-215)||(4611542-4611588)
chr8 (169-215)||(25172703-25172749)
chr8 (173-215)||(39954288-39954330)
chr8 (143-248)||(926767-926872)
chr8 (182-235)||(14227210-14227263)
chr8 (179-248)||(22197757-22197826)
chr8 (143-216)||(31557004-31557076)
chr8 (174-215)||(34201056-34201097)
chr8 (170-215)||(34897093-34897138)
chr8 (174-215)||(37225753-37225794)
chr8 (159-215)||(12985400-12985456)
chr8 (143-215)||(20679374-20679446)
chr8 (169-252)||(3677757-3677840)
chr8 (169-216)||(11927091-11927138)
chr8 (169-256)||(11944632-11944719)
chr8 (176-255)||(26529709-26529788)
chr8 (168-215)||(27213555-27213602)
chr8 (172-247)||(36934646-36934721)
chr8 (169-215)||(7658471-7658517)
chr8 (169-215)||(15816134-15816180)
chr8 (169-243)||(18964157-18964231)
chr8 (169-258)||(29357941-29358031)
chr8 (169-215)||(44505138-44505184)
chr8 (185-230)||(2648269-2648314)
chr8 (148-216)||(25886978-25887046)
chr8 (172-213)||(30133160-30133201)
chr8 (171-211)||(8917247-8917287)
chr8 (172-216)||(11803266-11803310)
chr8 (169-209)||(22430949-22430989)
chr8 (171-215)||(24362209-24362253)
chr8 (175-215)||(29198490-29198530)
chr8 (164-236)||(33697141-33697213)
[»] chr6 (60 HSPs)
chr6 (169-250)||(7086768-7086849)
chr6 (135-212)||(13360344-13360420)
chr6 (135-215)||(17841560-17841640)
chr6 (154-211)||(7377991-7378048)
chr6 (143-215)||(7265572-7265644)
chr6 (155-215)||(33001280-33001340)
chr6 (168-215)||(30866148-30866195)
chr6 (158-216)||(5732504-5732562)
chr6 (169-215)||(9195759-9195805)
chr6 (169-215)||(9617442-9617488)
chr6 (169-214)||(9629392-9629437)
chr6 (170-247)||(13851712-13851789)
chr6 (150-215)||(19040360-19040425)
chr6 (106-215)||(32298549-32298658)
chr6 (178-250)||(8805586-8805658)
chr6 (176-236)||(15443682-15443742)
chr6 (144-215)||(7977810-7977881)
chr6 (155-250)||(9658852-9658947)
chr6 (158-248)||(426508-426598)
chr6 (169-215)||(9025499-9025545)
chr6 (155-248)||(16833283-16833376)
chr6 (172-237)||(17168880-17168945)
chr6 (148-216)||(31579211-31579277)
chr6 (135-215)||(12627548-12627628)
chr6 (135-215)||(24614418-24614498)
chr6 (177-256)||(7625089-7625168)
chr6 (169-248)||(15489737-15489816)
chr6 (172-215)||(21885800-21885843)
chr6 (155-214)||(26314625-26314684)
chr6 (144-215)||(32511646-32511717)
chr6 (169-248)||(34073352-34073431)
chr6 (159-213)||(4864073-4864127)
chr6 (171-213)||(9024183-9024225)
chr6 (170-248)||(17168469-17168547)
chr6 (169-215)||(20371115-20371161)
chr6 (179-245)||(25038086-25038152)
chr6 (169-215)||(26178686-26178732)
chr6 (169-215)||(32299283-32299329)
chr6 (134-248)||(34595109-34595223)
chr6 (171-212)||(7112789-7112830)
chr6 (171-212)||(8781315-8781356)
chr6 (170-211)||(8931608-8931649)
chr6 (170-215)||(10842540-10842585)
chr6 (170-211)||(11591876-11591917)
chr6 (181-230)||(13211298-13211347)
chr6 (170-215)||(24832596-24832641)
chr6 (170-211)||(26562701-26562742)
chr6 (155-215)||(30851610-30851668)
chr6 (143-215)||(32978878-32978951)
chr6 (135-215)||(33340915-33340996)
chr6 (135-215)||(35125102-35125183)
chr6 (135-215)||(853830-853910)
chr6 (171-203)||(2769107-2769139)
chr6 (176-216)||(5462693-5462733)
chr6 (159-215)||(7938124-7938180)
chr6 (171-215)||(17302355-17302399)
chr6 (159-215)||(21924930-21924986)
chr6 (155-215)||(28715303-28715363)
chr6 (159-215)||(33419181-33419237)
chr6 (171-215)||(33468389-33468433)
[»] chr4 (55 HSPs)
chr4 (159-215)||(33950144-33950200)
chr4 (143-230)||(48139257-48139344)
chr4 (171-247)||(28157984-28158060)
chr4 (164-215)||(7214522-7214573)
chr4 (144-214)||(30103337-30103406)
chr4 (118-215)||(4157158-4157254)
chr4 (164-217)||(5775358-5775411)
chr4 (171-248)||(14126118-14126195)
chr4 (170-215)||(19230315-19230360)
chr4 (143-215)||(8423697-8423769)
chr4 (172-248)||(36635299-36635375)
chr4 (143-243)||(40179615-40179715)
chr4 (144-215)||(12895254-12895325)
chr4 (157-239)||(21345526-21345608)
chr4 (134-215)||(2361945-2362026)
chr4 (171-244)||(9299062-9299134)
chr4 (141-214)||(9996849-9996922)
chr4 (169-210)||(17344513-17344554)
chr4 (179-256)||(27706192-27706269)
chr4 (106-215)||(28964190-28964299)
chr4 (171-215)||(35723391-35723436)
chr4 (171-216)||(44081584-44081629)
chr4 (173-214)||(44796971-44797012)
chr4 (103-203)||(4157456-4157556)
chr4 (171-215)||(18513248-18513292)
chr4 (143-215)||(21945511-21945583)
chr4 (143-215)||(29205452-29205524)
chr4 (155-215)||(54580014-54580074)
chr4 (172-215)||(10013912-10013955)
chr4 (172-215)||(10021053-10021096)
chr4 (170-213)||(13134460-13134503)
chr4 (168-215)||(14465298-14465345)
chr4 (173-216)||(22440609-22440652)
chr4 (168-215)||(40613458-40613505)
chr4 (170-217)||(40742597-40742644)
chr4 (174-216)||(903929-903971)
chr4 (169-203)||(5555137-5555171)
chr4 (143-209)||(8402721-8402787)
chr4 (182-236)||(12077815-12077869)
chr4 (169-207)||(40224503-40224541)
chr4 (155-209)||(44362680-44362734)
chr4 (172-214)||(46180944-46180986)
chr4 (170-215)||(999354-999399)
chr4 (171-208)||(10499277-10499314)
chr4 (106-215)||(16073403-16073511)
chr4 (170-215)||(24343515-24343560)
chr4 (170-215)||(43300624-43300669)
chr4 (175-215)||(3634909-3634949)
chr4 (171-215)||(3712516-3712560)
chr4 (176-224)||(5176983-5177031)
chr4 (169-217)||(6485616-6485664)
chr4 (170-242)||(8820389-8820461)
chr4 (170-214)||(11110212-11110256)
chr4 (143-215)||(23292965-23293037)
chr4 (171-215)||(23915137-23915181)
[»] chr2 (42 HSPs)
chr2 (178-256)||(28412317-28412395)
chr2 (134-215)||(18840983-18841064)
chr2 (155-218)||(40361745-40361808)
chr2 (145-215)||(5367200-5367270)
chr2 (173-255)||(35455154-35455236)
chr2 (169-215)||(44605144-44605190)
chr2 (143-216)||(30404829-30404902)
chr2 (143-247)||(35449489-35449587)
chr2 (169-254)||(36756349-36756434)
chr2 (135-215)||(2415325-2415405)
chr2 (106-198)||(34993924-34994016)
chr2 (172-215)||(19613621-19613664)
chr2 (169-256)||(30471005-30471092)
chr2 (169-216)||(30527600-30527647)
chr2 (145-255)||(15972841-15972951)
chr2 (159-209)||(37491850-37491900)
chr2 (143-215)||(2438698-2438770)
chr2 (171-215)||(18570980-18571024)
chr2 (179-251)||(30335389-30335461)
chr2 (135-215)||(37411215-37411295)
chr2 (182-241)||(3103540-3103599)
chr2 (172-215)||(21616770-21616813)
chr2 (173-215)||(2665897-2665939)
chr2 (171-213)||(13204035-13204077)
chr2 (169-215)||(18420439-18420485)
chr2 (178-248)||(21782832-21782902)
chr2 (169-215)||(23718034-23718080)
chr2 (170-248)||(24011012-24011089)
chr2 (169-215)||(24105706-24105752)
chr2 (134-216)||(29176463-29176545)
chr2 (174-216)||(36281692-36281734)
chr2 (169-215)||(44860328-44860374)
chr2 (186-215)||(4690298-4690327)
chr2 (169-242)||(12668428-12668501)
chr2 (158-215)||(18255974-18256031)
chr2 (162-215)||(18276529-18276582)
chr2 (172-217)||(28121557-28121602)
chr2 (158-215)||(34691799-34691856)
chr2 (158-215)||(34714211-34714268)
chr2 (169-250)||(34784987-34785068)
chr2 (159-215)||(896219-896275)
chr2 (159-215)||(37497128-37497184)
[»] scaffold0050 (1 HSPs)
scaffold0050 (143-216)||(70285-70358)
[»] chr1 (64 HSPs)
chr1 (135-216)||(28674807-28674888)
chr1 (158-258)||(9709785-9709885)
chr1 (135-215)||(22515858-22515938)
chr1 (171-215)||(34712390-34712434)
chr1 (143-215)||(36878469-36878541)
chr1 (171-258)||(7918218-7918305)
chr1 (156-215)||(14332634-14332693)
chr1 (142-216)||(21530696-21530770)
chr1 (143-217)||(40258912-40258986)
chr1 (176-230)||(41017416-41017470)
chr1 (146-215)||(2896103-2896172)
chr1 (171-216)||(32724105-32724150)
chr1 (144-248)||(5927320-5927424)
chr1 (172-248)||(6427325-6427401)
chr1 (171-215)||(16164322-16164366)
chr1 (135-215)||(46348354-46348434)
chr1 (168-248)||(48450591-48450671)
chr1 (169-216)||(1864885-1864932)
chr1 (159-218)||(39130762-39130821)
chr1 (157-255)||(16927178-16927276)
chr1 (127-216)||(2784563-2784652)
chr1 (181-230)||(3921660-3921709)
chr1 (162-215)||(9900713-9900766)
chr1 (170-215)||(11634130-11634175)
chr1 (171-216)||(23804435-23804480)
chr1 (169-254)||(25272451-25272536)
chr1 (150-215)||(38078647-38078712)
chr1 (170-215)||(39101188-39101233)
chr1 (158-215)||(41877464-41877521)
chr1 (143-212)||(43492473-43492542)
chr1 (178-254)||(2288181-2288257)
chr1 (155-215)||(5898257-5898317)
chr1 (181-213)||(10799680-10799712)
chr1 (143-215)||(19637776-19637848)
chr1 (155-215)||(22881607-22881667)
chr1 (159-211)||(23636044-23636096)
chr1 (159-215)||(40181879-40181935)
chr1 (171-215)||(40747780-40747824)
chr1 (171-215)||(43609825-43609869)
chr1 (169-213)||(44482240-44482284)
chr1 (169-248)||(5376505-5376584)
chr1 (172-215)||(17425101-17425144)
chr1 (169-216)||(33230732-33230779)
chr1 (181-215)||(17080898-17080932)
chr1 (136-214)||(18337338-18337416)
chr1 (142-216)||(22907317-22907391)
chr1 (171-213)||(25361896-25361938)
chr1 (155-212)||(8842705-8842762)
chr1 (174-215)||(12713337-12713378)
chr1 (174-215)||(12717428-12717469)
chr1 (134-215)||(18190078-18190159)
chr1 (170-215)||(24176373-24176418)
chr1 (172-213)||(25098563-25098604)
chr1 (155-204)||(29163372-29163421)
chr1 (143-203)||(1815277-1815337)
chr1 (171-215)||(10233261-10233305)
chr1 (173-213)||(19324572-19324612)
chr1 (171-215)||(26238120-26238163)
chr1 (175-215)||(26837753-26837793)
chr1 (171-215)||(30847727-30847771)
chr1 (179-215)||(32461478-32461514)
chr1 (179-215)||(37055871-37055907)
chr1 (171-215)||(39828279-39828323)
chr1 (177-209)||(46914052-46914084)
[»] scaffold0697 (1 HSPs)
scaffold0697 (142-216)||(1651-1725)
[»] scaffold0011 (1 HSPs)
scaffold0011 (164-215)||(240021-240072)
[»] scaffold0085 (1 HSPs)
scaffold0085 (170-243)||(26373-26446)
[»] scaffold0053 (1 HSPs)
scaffold0053 (135-248)||(8773-8886)
[»] scaffold0020 (1 HSPs)
scaffold0020 (169-245)||(135317-135393)
[»] scaffold0110 (1 HSPs)
scaffold0110 (169-236)||(28837-28904)
[»] scaffold0376 (1 HSPs)
scaffold0376 (169-215)||(6320-6366)
[»] scaffold0123 (1 HSPs)
scaffold0123 (169-211)||(44530-44572)
[»] scaffold0036 (1 HSPs)
scaffold0036 (169-215)||(9752-9798)
[»] scaffold0008 (1 HSPs)
scaffold0008 (171-245)||(263379-263453)
[»] scaffold0007 (1 HSPs)
scaffold0007 (170-248)||(225274-225352)
[»] scaffold0044 (1 HSPs)
scaffold0044 (169-214)||(53189-53234)
[»] scaffold0320 (1 HSPs)
scaffold0320 (172-216)||(17044-17088)
[»] scaffold0049 (1 HSPs)
scaffold0049 (159-215)||(63781-63837)


Alignment Details
Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 248
Target Start/End: Complemental strand, 25093585 - 25093477
Alignment:
Q  140 tcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctg 239  Q
    |||||||||||||| ||| ||||| ||| |||||||||||||||||| | |||| ||| |||||||||||| ||||| | ||| | |||||||||||| |    
T  25093585 tcagtgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtcag 25093486  T
Q  240 tgtcgtgtc 248  Q
    |||||||||    
T  25093485 tgtcgtgtc 25093477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 45451649 - 45451561
Alignment:
Q  127 aattaattgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||| |||||||||| ||||||||||| ||||||||| ||| ||||||||||| |||| | | || ||||| |||||||||||||||||    
T  45451649 aattgattgtgtctcggtgtcggacatgtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattatta 45451561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 55401163 - 55401083
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||| ||||||||||  ||||||||| ||| ||||||| | |||||||| |||||||||| ||||| |||||||||||    
T  55401163 gtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 55401083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 32804520 - 32804592
Alignment:
Q  140 tcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    |||||| ||||||| ||||||||| ||    |||||||||||||||| |||||||||| ||||||||||||||||||    
T  32804520 tcagtggcggacatgtgtcgtgtccga----gacacatataattacactaaattatgtgattttctcaaattattaa 32804592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 11658868 - 11658790
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    ||||||||||||| ||| | |||||||  ||||||||||||||||||  ||||||  |||| |||||||||||||||||    
T  11658868 cgacacatataatcacactgaattatgcgattttctcaaattattaacgatgttggtgtgtcagtgtctgtgtcgtgtc 11658790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 40993277 - 40993374
Alignment:
Q  106 atgaagcatgaccactcatcgaattaattgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttatttt 203  Q
    ||||||||||  ||||| ||| ||||   ||||| | ||||||||||| ||||||||| ||| |||||||||||||||||| | |||||||| |||||    
T  40993277 atgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttt 40993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 49505148 - 49505205
Alignment:
Q  158 cgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| ||| | |||||||||||||||| |||||||||| |||||||||||||||||    
T  49505148 cgtgtccgacactgacacatataattacactaaattatgtgattttctcaaattatta 49505205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 16192758 - 16192802
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattattaa 216  Q
    ||||||||||||||| | |||||||||||||||||||||||||||    
T  16192758 acacatataattacactgaattatgttattttctcaaattattaa 16192802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 20691383 - 20691327
Alignment:
Q  159 gtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| ||||||||||| |||||| | |||||||| |||||||||||||||||    
T  20691383 gtgtctgacaccgacacatatgattacactgaattatgtcattttctcaaattatta 20691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 48202276 - 48202320
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||    
T  48202276 gacacatataattacattaaattatgtgattttctcaaactatta 48202320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 11313808 - 11313851
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||| |||||||||| |||||||||||||||||    
T  11313808 acacatataattacactaaattatgtgattttctcaaattatta 11313851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 8789541 - 8789599
Alignment:
Q  155 tgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattat 213  Q
    ||||||||| ||| ||||||||||||||||||   |||||||| |||||||||||||||    
T  8789541 tgtcgtgtccgacaccgacacatataattacacggaattatgtgattttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 9789172 - 9789126
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||||||||||||||| ||||||| | |||||||||    
T  9789172 ccgacacatataattacattaaattatattattttataaaattatta 9789126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 17568698 - 17568736
Alignment:
Q  179 taattacattaaattatgttattttctcaaattattaat 217  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  17568698 taattacattaaattatgtaattttctcaaattattaat 17568736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 47362608 - 47362542
Alignment:
Q  177 tataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtc 243  Q
    |||||||||||| |||||||| ||||||| ||||||||| | ||||||||||||  ||||| |||||    
T  47362608 tataattacattcaattatgtaattttcttaaattattactgatgttgacgtgtcggtgtcggtgtc 47362542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 7928515 - 7928458
Alignment:
Q  158 cgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| ||| |||||||||||||||||| | |||||||| ||||| |||||||||||    
T  7928515 cgtgtccgacaccgacacatataattacactgaattatgtgattttttcaaattatta 7928458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 5339149 - 5339109
Alignment:
Q  182 ttacattaaattatgttattttctcaaattattaataatgt 222  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  5339149 ttacattaaattatgtgattttctcaaattattaacaatgt 5339109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 9624689 - 9624649
Alignment:
Q  175 catataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||| |||||||| |||||||||||||||||    
T  9624689 catataattacattgaattatgtgattttctcaaattatta 9624649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 10955040 - 10954960
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||| ||||||||||||  ||||||||| ||| ||||||| | | |||||| | |||||||| ||||| |||||||||||    
T  10955040 gtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaattatta 10954960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 248
Target Start/End: Original strand, 23184080 - 23184156
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    ||||||||||||||||  |||||| | ||||| |||||||||||  ||| ||||||||| ||||| ||| |||||||    
T  23184080 acacatataattacatagaattatatgattttgtcaaattattatcaatattgacgtgtcagtgtttgtatcgtgtc 23184156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 3587341 - 3587384
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||||||||||| ||||||| | |||||||||    
T  3587341 acacatataattacattaaattatattattttgtaaaattatta 3587384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 11665998 - 11665919
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    |||||||||||||||||| |||||| ||| ||||| |||||||||||    ||| |  |||||||||| |||||||||||    
T  11665998 ccgacacatataattacactaaattgtgtgattttatcaaattattagcgttgtcggtgtgttagtgtgtgtgtcgtgtc 11665919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 19730229 - 19730272
Alignment:
Q  184 acattaaattatgttattttctcaaattattaataatgttgacg 227  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||    
T  19730229 acattcaattatgtcattttctcaaattattaacaatgttgacg 19730272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 21161505 - 21161560
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattattaataatgttga 225  Q
    ||||||||||||||||||| || ||| ||||||| ||||||||||| | |||||||    
T  21161505 cgacacatataattacattcaactatattattttttcaaattattatttatgttga 21161560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 40150567 - 40150622
Alignment:
Q  160 tgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||| ||| ||||||||||| |||||||| |||||| | |||||||||||||||||    
T  40150567 tgtcagacaccgacacatatgattacattgaattatatcattttctcaaattatta 40150622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 8039840 - 8039886
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||||| | |||||| | |||||||||||||||||    
T  8039840 ccgacacatataattacactgaattatataattttctcaaattatta 8039886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 8842402 - 8842348
Alignment:
Q  150 acatatgtcgtgtctgactccgacacatataattacattaaattatgttattttc 204  Q
    |||| ||||||||||||| |||||| |||||||||||  ||||||||| ||||||    
T  8842402 acatgtgtcgtgtctgacaccgacatatataattacaccaaattatgtgattttc 8842348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 13807228 - 13807158
Alignment:
Q  164 tgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagt 234  Q
    |||| ||||||||||| |||| ||| |||||||| ||||||||||||| |||  | ||||| |||||||||    
T  13807228 tgacaccgacacatattattatattgaattatgtgattttctcaaattgttatcagtgttggcgtgttagt 13807158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 250
Target Start/End: Original strand, 25652039 - 25652117
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctg 250  Q
    |||| ||||| |||| | |||||| | |||||||||||||||||    ||||| |||||||||||| ||||||||||||    
T  25652039 acacctataactacactgaattatatcattttctcaaattattatccgtgttggcgtgttagtgtccgtgtcgtgtctg 25652117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 28576770 - 28576724
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| |||||||||| |||| ||| |||||||||||||||||    
T  28576770 ccgacacatgtaattacattcaattttgtcattttctcaaattatta 28576724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 205
Target Start/End: Complemental strand, 35223006 - 35222956
Alignment:
Q  155 tgtcgtgtctgactccgacacatataattacattaaattatgttattttct 205  Q
    |||| |||| ||| |||||||||||||||||||| |||||||| |||||||    
T  35223006 tgtcatgtccgacaccgacacatataattacattgaattatgtgattttct 35222956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 37991560 - 37991495
Alignment:
Q  172 acacatataattacattaaattatg-ttattttctcaaattattaataatgttgacgtgttagtgtc 237  Q
    ||||||||||||||||| ||||||  ||||||| |||||||||||  |||||||| |||||||||||    
T  37991560 acacatataattacattgaattataattatttt-tcaaattattagaaatgttgatgtgttagtgtc 37991495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 3610677 - 3610608
Alignment:
Q  179 taattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    |||||||| | | |||||||||||| | ||||||||||   ||||| ||||| |||||||||||||||||    
T  3610677 taattacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtctgtgtcgtgtc 3610608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 8383322 - 8383265
Alignment:
Q  158 cgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| ||| ||||||| |||||||||| | |||||| | |||||||||||||||||    
T  8383322 cgtgtccgacaccgacacttataattacactgaattatatgattttctcaaattatta 8383265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 10268481 - 10268538
Alignment:
Q  159 gtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    ||||||||| | ||||| | |||||||| |||||||||| ||||| ||||||||||||    
T  10268481 gtgtctgacactgacacttgtaattacactaaattatgtgattttttcaaattattaa 10268538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 11252040 - 11251986
Alignment:
Q  159 gtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| ||||||||||  |||||| | |||||||| |||||||||||||||||    
T  11252040 gtgtctgacaccgacacata--attacactgaattatgtgattttctcaaattatta 11251986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 15314884 - 15314929
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattattaat 217  Q
    ||||||||||||||| |||||||||| ||||| |||||||| ||||    
T  15314884 acacatataattacactaaattatgtgattttttcaaattaataat 15314929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 247
Target Start/End: Original strand, 16000010 - 16000099
Alignment:
Q  158 cgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgt 247  Q
    |||||| ||| ||||||| | || ||||| | |||||||||||||| | ||||||||| |  ||| | ||||| ||||||||||||||||    
T  16000010 cgtgtccgacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgt 16000099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 24633392 - 24633453
Alignment:
Q  155 tgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    |||||||||  || |||||||||||||||||||| ||||| || |||||  |||||||||||    
T  24633392 tgtcgtgtccaacaccgacacatataattacattgaattacgtgatttttccaaattattaa 24633453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 27277852 - 27277889
Alignment:
Q  178 ataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  27277852 ataattacactaaattatgtgattttctcaaattatta 27277889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 33331938 - 33331995
Alignment:
Q  159 gtgtctgactccgacacatataattacattaaatta-tgttattttctcaaattatta 215  Q
    ||||||||| ||||||||| |||||||||| ||| | | |||||||||||||||||||    
T  33331938 gtgtctgacaccgacacatgtaattacatttaatcacttttattttctcaaattatta 33331995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 41319316 - 41319361
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| ||||||||| |||||||| ||||| |||||||||||    
T  41319316 cgacacatacaattacattgaattatgtcattttttcaaattatta 41319361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 51138316 - 51138353
Alignment:
Q  176 atataattacattaaattatgttattttctcaaattat 213  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  51138316 atataattaccctaaattatgttattttctcaaattat 51138353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 52369828 - 52369783
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| ||| |||||||| |||||||| |||||||||||||||||    
T  52369828 cgacacctatgattacattgaattatgtaattttctcaaattatta 52369783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 17052418 - 17052378
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaa 209  Q
    ||||||| |||| |||||||||||||| |||||||||||||    
T  17052418 ccgacacttatagttacattaaattatattattttctcaaa 17052378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 21419467 - 21419507
Alignment:
Q  176 atataattacattaaattatgttattttctcaaattattaa 216  Q
    ||||||||||||| |||||| ||||||||| ||||||||||    
T  21419467 atataattacattgaattatattattttcttaaattattaa 21419507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 28918091 - 28917976
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcgtgtct--gactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgtta 232  Q
    ||||| ||||||||||||  |||||||||   ||| ||||||| | |||||||| | |||||||| ||||| |||||||||||   |||| | ||||| |    
T  28918091 gtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtca 28917992  T
Q  233 gtgtctgtgtcgtgtc 248  Q
    || || ||||||||||    
T  28917991 gtttccgtgtcgtgtc 28917976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 37077410 - 37077366
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| ||| |||| ||||||||||| ||||||||||||||    
T  37077410 gacacatatgattccattgaattatgttatattctcaaattatta 37077366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 7e-21; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 14077413 - 14077528
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgt 242  Q
    |||||||||||  ||||||||| |||||||||| |||||||| |||||||||||||||||| |||||| ||||    | | ||||||| |||||| ||||    
T  14077413 gtgtcggacatgcgtcgtgtctaactccgacacttataattatattaaattatgttattttttcaaataattaggggtatcgacgtgtaagtgtccgtgt 14077512  T
Q  243 cgtgtctgatgtccat 258  Q
    ||||| ||||||||||    
T  14077513 cgtgtttgatgtccat 14077528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 143 - 258
Target Start/End: Original strand, 14387441 - 14387556
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgt 242  Q
    |||||||||||  ||||||||| |||||||||| |||||||| |||||||||||||||||| |||||| ||||    | | ||||||| |||||| ||||    
T  14387441 gtgtcggacatgcgtcgtgtctaactccgacacttataattatattaaattatgttattttttcaaataattaggggtatcgacgtgtaagtgtccgtgt 14387540  T
Q  243 cgtgtctgatgtccat 258  Q
    ||||| ||||||||||    
T  14387541 cgtgtttgatgtccat 14387556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 7328696 - 7328774
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgt 247  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||  | | | ||||||||| ||||||||||||||    
T  7328696 ccgacacatataattacactaaattatgttattttctcaaattattagcagtatcgacgtgttaatgtctgtgtcgtgt 7328774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 215
Target Start/End: Original strand, 27093367 - 27093464
Alignment:
Q  118 cactcatcgaattaattgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| ||||  ||||||  ||||||||||| ||||||||||| || ||||| |||||||||||| |||||||||| ||||||| |||||||||    
T  27093367 cactcatcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattatta 27093464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 215
Target Start/End: Complemental strand, 27184934 - 27184837
Alignment:
Q  118 cactcatcgaattaattgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| ||||  ||||||  ||||||||||| ||||||||||| || ||||| |||||||||||| |||||||||| ||||||| |||||||||    
T  27184934 cactcatcggattaggtgtgtcctagtgtcggacacatgtcgtgtctaacaccgacgcatataattacactaaattatgtgattttcttaaattatta 27184837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 179 - 256
Target Start/End: Complemental strand, 6028669 - 6028592
Alignment:
Q  179 taattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctgatgtcc 256  Q
    |||||||||||||||||||||| || ||||||||||||  || | || |||| |||||||||||||||||||||||||    
T  6028669 taattacattaaattatgttatattttcaaattattaaccatatcgatgtgtcagtgtctgtgtcgtgtctgatgtcc 6028592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 20549879 - 20549799
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||| |||||||||| ||| ||||| ||| |||||||||||||||||| | ||||| || |||||||||||||||||    
T  20549879 gtgtctcattgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattacgtgattttctcaaattatta 20549799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 5835321 - 5835255
Alignment:
Q  149 gacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||| ||||| |||||||| |||||||||||||||||| | |||||||||||||||||||| |||||    
T  5835321 gacacatgtcatgtctgacaccgacacatataattacactgaattatgttattttctcaaactatta 5835255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 216
Target Start/End: Complemental strand, 38143287 - 38143230
Alignment:
Q  159 gtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    ||||||||| || |||||||||||||||||||||||||| ||||| ||||||||||||    
T  38143287 gtgtctgacaccaacacatataattacattaaattatgtgattttttcaaattattaa 38143230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 21880232 - 21880160
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||| ||||||||| ||| ||||||| | |||||||| | |||||||| |||||||||||||||||    
T  21880232 gtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaaattatta 21880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 3554460 - 3554555
Alignment:
Q  118 cactcatcgaattaattgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattat 213  Q
    ||||| ||||||||   ||||||||||||  || || ||||||||| ||| ||||||  ||||||||||||||||||||| ||||||| |||||||    
T  3554460 cactcttcgaattagacgtgtctcagtgttagatatgtgtcgtgtccgacaccgacatctataattacattaaattatgtaattttcttaaattat 3554555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 15902876 - 15902797
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    |||||||||||||||||| |||||||||| ||||| ||||||||||| |  ||| | | ||| |||||||||||||||||    
T  15902876 ccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgtgtc 15902797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 26329387 - 26329466
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    |||||||||||||||||| | |||| |||  |||||||||||||||||  |||| | ||||| |||||||||||||||||    
T  26329387 ccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtc 26329466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 256
Target Start/End: Complemental strand, 598288 - 598175
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgt 242  Q
    ||||||||||  ||||||||||||| ||||||| || ||||||||| ||||| || ||||||| |||||||||    ||| || |||| |||||| ||||    
T  598288 gtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgattttcttaaattattagcggtgtcgatgtgtcagtgtccgtgt 598189  T
Q  243 cgtgtctgatgtcc 256  Q
    | |||||| |||||    
T  598188 catgtctggtgtcc 598175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 3721158 - 3721101
Alignment:
Q  158 cgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| ||| |||||||||||||||| | |||||||||| |||||||||||||||||    
T  3721158 cgtgtccgacaccgacacatataattatactaaattatgtgattttctcaaattatta 3721101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 13579468 - 13579525
Alignment:
Q  158 cgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| ||||| ||||||||||||||||||||||||||| |||  ||||||||||||    
T  13579468 cgtgtccgactcagacacatataattacattaaattatgtcattcgctcaaattatta 13579525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 255
Target Start/End: Complemental strand, 26733381 - 26733272
Alignment:
Q  146 tcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgt 245  Q
    ||||||||  |||||||| ||| ||||||||| |||||| | | |||||||| ||||| |||||||||||    ||| ||||||| |||||| |||||||    
T  26733381 tcggacatgcgtcgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgt 26733282  T
Q  246 gtctgatgtc 255  Q
    ||||| ||||    
T  26733281 gtctggtgtc 26733272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 8234234 - 8234154
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||| ||||||||||| ||||||||| ||| ||| ||| | ||| |||| | |||||||||||||| |||||||||||    
T  8234234 gtgtctcggtgtcggacatgtgtcgtgtccgacaccggcacttgtaactacactgaattatgttattttttcaaattatta 8234154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 244
Target Start/End: Complemental strand, 22484104 - 22484004
Alignment:
Q  144 tgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtc 243  Q
    |||||||||| |||| |||||||| |||||||||||||||| | | |||||||  ||||||| |||||||||    ||| | ||||| ||||||||||||    
T  22484104 tgtcggacatgtgtcatgtctgacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgtctgtgtc 22484005  T
Q  244 g 244  Q
    |    
T  22484004 g 22484004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 38134411 - 38134457
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||| |||||||| |||||||| |||||||||||||||||    
T  38134411 ccgacacatatgattacattgaattatgtcattttctcaaattatta 38134457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 18213025 - 18213074
Alignment:
Q  156 gtcgtgtctgactccgacacatataattacattaaattatgttattttct 205  Q
    |||||||| ||| |||||||||||||||||| |||||||||| |||||||    
T  18213025 gtcgtgtccgacaccgacacatataattacactaaattatgtgattttct 18213074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 19206104 - 19206023
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctg 250  Q
    |||||||||||||||| | | |||||||| |||||||||||||||||    ||| | |||||| ||||| ||||||||||||    
T  19206104 ccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtctg 19206023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 27732223 - 27732291
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    ||||||||||||||||||||      |||||||||||||||||| | |||||||| ||||||| ||||||||||    
T  27732223 gtgtcggacatatgtcgtgta-----ccgacacatataattacactgaattatgtaattttcttaaattattaa 27732291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 42720880 - 42720941
Alignment:
Q  154 atgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||| ||||| ||| | |||||||||||||||||| |||||||| ||||| |||||||||||    
T  42720880 atgttgtgtcagacactgacacatataattacatttaattatgtgattttttcaaattatta 42720941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 5233680 - 5233636
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattattaa 216  Q
    ||||||||||||||| || ||||||| ||||||||||||||||||    
T  5233680 acacatataattacactagattatgtgattttctcaaattattaa 5233636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 5236033 - 5235961
Alignment:
Q  176 atataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    ||||||||||| |||||||| | ||||||| |||||||||    ||| ||||||| |||||||||||||||||    
T  5236033 atataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtc 5235961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 17307944 - 17307904
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaatta 212  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  17307944 acacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 19930947 - 19930991
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattatt 214  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||    
T  19930947 cgacacatataattacattgaattatgtcattttatcaaattatt 19930991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 21826338 - 21826238
Alignment:
Q  158 cgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctgatgtcca 257  Q
    |||||| ||| ||||||||||| |||| | | | |||||| ||||| | ||||||||| |  ||| | ||||||||||||| ||||||||||| ||||||    
T  21826338 cgtgtccgacaccgacacatattattagactgagttatgtgatttttttaaattattagtcgtgtcggcgtgttagtgtctatgtcgtgtctggtgtcca 21826239  T
Q  258 t 258  Q
    |    
T  21826238 t 21826238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 41360965 - 41360921
Alignment:
Q  168 tccgacacatataattacattaaattatgttattttctcaaatta 212  Q
    ||||||||||| | ||||||| |||||||||||||||||||||||    
T  41360965 tccgacacatacagttacattgaattatgttattttctcaaatta 41360921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 1433508 - 1433461
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    ||||||||||||||||||  |||| |||| ||||||||||||||||||    
T  1433508 ccgacacatataattacaccaaatgatgtgattttctcaaattattaa 1433461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 8160467 - 8160424
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||    
T  8160467 acacatataattacactaaattatgtaattttcttaaattatta 8160424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 21139001 - 21139072
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtc 243  Q
    |||||||||||||||||| ||| |||||  ||||||||||||||||||   ||||||| ||| ||||||||||||    
T  21139001 ccgacacatataattacagtaa-ttatg--attttctcaaattattaacggtgttgacatgtcagtgtctgtgtc 21139072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 24146879 - 24146824
Alignment:
Q  160 tgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||| ||| |||||||||||||||| ||| |||||||| ||||||| |||||||||    
T  24146879 tgtcagacaccgacacatataattatattgaattatgtgattttctaaaattatta 24146824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 248
Target Start/End: Complemental strand, 27945095 - 27945016
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    ||||||| | |||||||| | |||||||| ||||||||||||||||| |  ||| | ||||| |||||| ||||||||||    
T  27945095 ccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtc 27945016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 48246825 - 48246896
Alignment:
Q  176 atataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgt 247  Q
    ||||||||||||| | || ||| |||||||||||||| ||| | ||| ||||||| | ||||||||||||||    
T  48246825 atataattacattgagttgtgtgattttctcaaattaataacagtgtcgacgtgtcattgtctgtgtcgtgt 48246896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 3520347 - 3520393
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||||||| |||||| | |||||||||||| ||||    
T  3520347 ccgacacatataattacattgaattatatgattttctcaaatgatta 3520393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 213
Target Start/End: Complemental strand, 9483002 - 9482944
Alignment:
Q  155 tgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattat 213  Q
    ||||| ||| ||| |||||||||||||||||| | |||| ||| |||||||||||||||    
T  9483002 tgtcgcgtccgacaccgacacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Complemental strand, 16341546 - 16341504
Alignment:
Q  173 cacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||| | |||||||| |||||||||||||||||    
T  16341546 cacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 22602715 - 22602793
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgt 247  Q
    |||||||||||||||||| | |||||||| |||||||||||| ||| |   ||| | ||||| |||| |||||||||||    
T  22602715 ccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtgcctgtgtcgtgt 22602793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 1401094 - 1401033
Alignment:
Q  154 atgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||| ||| |||| || |||||||||| | |||||||| | |||||||||||||||    
T  1401094 atgtcgtgtcggacaccgatacttataattacactgaattatgtgagtttctcaaattatta 1401033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 4008569 - 4008658
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctgatgtccat 258  Q
    |||||||||| ||||||||| ||| |||| ||||| ||||||||||||   |||   ||||| ||| |||||||| | ||||||||||||    
T  4008569 ccgacacatacaattacattgaatcatgtaattttatcaaattattaaaggtgtctgcgtgtcagtttctgtgtcatatctgatgtccat 4008658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 258
Target Start/End: Original strand, 4013961 - 4014050
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctgatgtccat 258  Q
    |||||||||| ||||||||| ||| |||| ||||| ||||||||||||   |||   ||||| ||| |||||||| | ||||||||||||    
T  4013961 ccgacacatacaattacattgaatcatgtaattttatcaaattattaaaggtgtctgcgtgtcagtttctgtgtcatatctgatgtccat 4014050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 11061070 - 11061127
Alignment:
Q  158 cgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||| ||||||| | |||||| | |||||||||| ||||| |||||||||||    
T  11061070 cgtgtctgacaccgacacttgtaattatactaaattatgtgattttttcaaattatta 11061127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 12278888 - 12278843
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||||| | |||||||| ||||||| |||||||||    
T  12278888 cgacacatataattacactgaattatgtcattttcttaaattatta 12278843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 22868094 - 22868017
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    |||||||||||||||| | |||||||| ||||||||| ||||||| |  ||| | ||||| |||||| |||| |||||    
T  22868094 gacacatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtcggtgttgtgtc 22868017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 25481999 - 25481910
Alignment:
Q  126 gaattaattgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||  |||| ||| ||||||||| || ||||||| ||| || |||| | |||||||| | |||||||| ||||| |||||||||||    
T  25481999 gaattaagcgtgtttcaatgtcggacacatatcgtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattatta 25481910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 32287433 - 32287514
Alignment:
Q  134 tgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| | ||||||||||  |||| |||| ||| |||||||||||| || || | |||||||| ||||||||| |||||||    
T  32287433 tgtgtcccggtgtcggacacttgtcatgtccgacaccgacacatatacttgcactgaattatgtgattttctcagattatta 32287514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 32308248 - 32308191
Alignment:
Q  106 atgaagcatgaccactcatcgaattaattgtgtctcagtgtcggacatatgtcgtgtc 163  Q
    ||||||||||| ||||| ||| ||||  |||||||| ||||||||||| |||||||||    
T  32308248 atgaagcatgaacactcctcggattagctgtgtctcggtgtcggacatgtgtcgtgtc 32308191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 35297680 - 35297725
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattattaat 217  Q
    ||||||||||||| | | |||||||| |||||||||||||||||||    
T  35297680 acacatataattataatgaattatgtgattttctcaaattattaat 35297725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 2948737 - 2948693
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattat 213  Q
    |||||||||||||||||| ||||||| || ||||||| |||||||    
T  2948737 ccgacacatataattacactaaattacgtgattttctaaaattat 2948693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 4909203 - 4909159
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| |||||| | |||||||| |||||||||||||||||    
T  4909203 gacacatatgattacaatgaattatgtaattttctcaaattatta 4909159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 7438765 - 7438713
Alignment:
Q  164 tgactccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    |||| ||||||| | |||||||||| |||||||| ||||| ||||||||||||    
T  7438765 tgacaccgacacttgtaattacattgaattatgtgattttttcaaattattaa 7438713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 217
Target Start/End: Original strand, 7973103 - 7973178
Alignment:
Q  144 tgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgt--tattttctcaaattattaat 217  Q
    |||||||||| |||||||||| || || |||  | |||||||||||||||||||  | |||| |||||||||||||    
T  7973103 tgtcggacatgtgtcgtgtctcacaccaacatttgtaattacattaaattatgtgattttttttcaaattattaat 7973178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 9408339 - 9408387
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaat 217  Q
    ||||||| | |||||||| |||||||||| ||||| |||||||||||||    
T  9408339 ccgacacttgtaattacactaaattatgtgattttttcaaattattaat 9408387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 248
Target Start/End: Complemental strand, 17285127 - 17285039
Alignment:
Q  160 tgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    |||||||| | ||||||| | |||| ||| |||||| | ||| ||||||||||||| |  ||||||| ||||||||| ||||| |||||    
T  17285127 tgtctgacacagacacatgtgattaaattgaattatatcattctctcaaattattattggtgttgacttgttagtgtatgtgttgtgtc 17285039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 17851483 - 17851439
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||| | |||||||| ||||||| |||||||||    
T  17851483 gacacatataattacactgaattatgtgattttctaaaattatta 17851439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 26022536 - 26022632
Alignment:
Q  151 catatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgt 247  Q
    ||||||||||||  ||| |||||||||||| ||||| | |||||  | | || |||||||||||| | ||||||| |||| | ||||||||| ||||    
T  26022536 catatgtcgtgttcgacaccgacacatatagttacactgaattagataacttgctcaaattattagtgatgttgatgtgtcaatgtctgtgttgtgt 26022632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 32308172 - 32308128
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||| ||||||| | |||||||| |||||||||||||||||    
T  32308172 gacacatacaattacactgaattatgtgattttctcaaattatta 32308128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 30502360 - 30502439
Alignment:
Q  136 tgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||| ||||||||||||| ||||||||| ||| |||||||||||||||||| | ||||| || |||||||||||||||||    
T  30502360 tgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattatta 30502439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 30542703 - 30542782
Alignment:
Q  136 tgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||| ||||||||||||| ||||||||| ||| |||||||||||||||||| | ||||| || |||||||||||||||||    
T  30542703 tgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattatta 30542782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 215
Target Start/End: Original strand, 32630689 - 32630786
Alignment:
Q  118 cactcatcgaattaattgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||| ||||||||  ||||||||| |||||||||  |||||| || ||| | |||||||||||||||||| |||||| | |||||||||||||||||    
T  32630689 cactcctcgaattaggtgtgtctcaatgtcggacacgtgtcgtatccgacactgacacatataattacattgaattatataattttctcaaattatta 32630786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 23012387 - 23012459
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||| ||||| |||||||||  || ||||||||||||||||||||||||||| | |||||||||||||||||    
T  23012387 gtgtcagacatgtgtcgtgtccaacaccgacacatataattacattaaattatatgattttctcaaattatta 23012459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 18421824 - 18421890
Alignment:
Q  147 cggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattat 213  Q
    ||||||| ||||||||| ||| |||||||||||||||||| |  ||||||| |||||||||||||||    
T  18421824 cggacatgtgtcgtgtccgacgccgacacatataattacactggattatgtgattttctcaaattat 18421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 172 - 258
Target Start/End: Original strand, 19293431 - 19293517
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctgatgtccat 258  Q
    |||||||| |||||| | |||||||||||||||| ||||||||| |  |||   |||||| |||||||||||||||||| |||||||    
T  19293431 acacatatgattacacttaattatgttattttcttaaattattattggtgtcagcgtgttggtgtctgtgtcgtgtctggtgtccat 19293517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 36838597 - 36838551
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||    
T  36838597 ccgacacatataattacactaaattatgtaattttctcaaattatta 36838551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 215
Target Start/End: Original strand, 28588616 - 28588725
Alignment:
Q  106 atgaagcatgaccactcatcgaattaattgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttct 205  Q
    ||||||||||  ||||| ||| |||||  |||||   ||||| || || ||||||||| ||| ||||||| |||||||||| | |||||||| |||||||    
T  28588616 atgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgattttct 28588715  T
Q  206 caaattatta 215  Q
    ||||||||||    
T  28588716 caaattatta 28588725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 32444820 - 32444747
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgt 242  Q
    ||||||||| | |||||||| |||||||| || |||||||||| |||||  ||||||||||| |||||||||||    
T  32444820 ccgacacatttgattacattgaattatgtcatcttctcaaattgttaatggtgttgacgtgtcagtgtctgtgt 32444747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 16203786 - 16203846
Alignment:
Q  155 tgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||| |||| ||| |||||||||||||||||| |||||||||  |||||||||||||||||    
T  16203786 tgtcttgtccgacaccgacacatataattacactaaattatgagattttctcaaattatta 16203846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 236
Target Start/End: Complemental strand, 41600948 - 41600885
Alignment:
Q  173 cacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgt 236  Q
    ||||||| |||| ||| |||| ||| |||||||||||||||||  |||||||||||||||||||    
T  41600948 cacatatgattatattgaattgtgtaattttctcaaattattatcaatgttgacgtgttagtgt 41600885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 15086552 - 15086482
Alignment:
Q  143 gtgtcggacatatgtcg-tgtctgactccgacacatataattacattaaattatgttattttctcaaatta 212  Q
    |||||||||||  |||| |||| ||| ||||||||||||||||||||| ||||| | ||||||||||||||    
T  15086552 gtgtcggacatgggtcggtgtcagacaccgacacatataattacattacattatatgattttctcaaatta 15086482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 14873576 - 14873527
Alignment:
Q  164 tgactccgacacatataattacattaaattatgttattttctcaaattat 213  Q
    |||| |||||||||||||||||| ||||||||||  ||||||||||||||    
T  14873576 tgacaccgacacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 18607103 - 18607148
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| ||| |||||||| ||||||||||||||||||||||||||    
T  18607103 cgacacctatgattacattgaattatgttattttctcaaattatta 18607148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 12927722 - 12927662
Alignment:
Q  155 tgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||| |||||||| | |||| ||||||||||| |||||||| | |||||||||||||||||    
T  12927722 tgtcatgtctgacactgacatatataattacactaaattatatgattttctcaaattatta 12927662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 27144515 - 27144471
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||| |||||||||| |||| ||||||||||||    
T  27144515 gacacatataattacactaaattatgtgatttcctcaaattatta 27144471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 35017085 - 35017045
Alignment:
Q  175 catataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  35017085 catataattacactaaattatgtgattttctcaaattatta 35017045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 42029826 - 42029770
Alignment:
Q  149 gacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttct 205  Q
    ||||| ||||||||| ||| |||| ||||||||||||||| |||||||| |||||||    
T  42029826 gacatgtgtcgtgtccgacaccgatacatataattacattgaattatgtgattttct 42029770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 5616218 - 5616273
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattattaataatgttga 225  Q
    ||||||||||||||||||| || ||| ||||||| ||||||||||| | |||||||    
T  5616218 cgacacatataattacattcaactatattattttttcaaattattatttatgttga 5616273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 6471897 - 6471940
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||| | |||||||| |||||||||||||||||    
T  6471897 acacatataattacactgaattatgtgattttctcaaattatta 6471940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 16374347 - 16374418
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgt 240  Q
    ||||||||| |||||||| | | |||||||||||| |  |||||||||  |||| |||||||||||||||||    
T  16374347 ccgacacatgtaattacactgatttatgttatttttttcaattattaacgatgtcgacgtgttagtgtctgt 16374418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 17482473 - 17482524
Alignment:
Q  159 gtgtctgactccgacacatataattacattaaattatgttattttctcaaat 210  Q
    ||||| ||| |||||||| ||||||||||||||| |||| ||||||||||||    
T  17482473 gtgtccgacaccgacacacataattacattaaatcatgtcattttctcaaat 17482524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 216
Target Start/End: Complemental strand, 30098372 - 30098333
Alignment:
Q  177 tataattacattaaattatgttattttctcaaattattaa 216  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  30098372 tataattacattgaattatgtgattttctcaaattattaa 30098333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 38749571 - 38749614
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||    
T  38749571 acacatataattacattgaattatgtcattttttcaaattatta 38749614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 3966557 - 3966511
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||||| | |||| ||| |||||||||||||||||    
T  3966557 ccgacacatataattacactgaattgtgtgattttctcaaattatta 3966511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 8420081 - 8420035
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||| | |||||||||| |||||||||||||| |||||||||||    
T  8420081 ccgacacttgtaattacattgaattatgttattttttcaaattatta 8420035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 11685993 - 11685947
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||||| |||||||||  | |||||||||||||||    
T  11685993 ccgacacatataattacactaaattatgcgactttctcaaattatta 11685947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 17925177 - 17925223
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||| |||||||| |||||||| ||||||| |||||||||    
T  17925177 ccgacacatattattacattgaattatgtgattttcttaaattatta 17925223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 19737487 - 19737533
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||| ||| |||| |||||||| |||||||||||||||||    
T  19737487 ccgacacatatgattgcattgaattatgtaattttctcaaattatta 19737533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 22423817 - 22423863
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| ||||||||| ||| |||||||| |||||||||||||||||    
T  22423817 ccgacatatataattatattgaattatgtgattttctcaaattatta 22423863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 25863257 - 25863179
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    |||||| |||||||||| | |||||| | |||||||||||||||||   |||| |||||||   |||||||||||||||    
T  25863257 cgacacttataattacactgaattatatcattttctcaaattattatacatgtcgacgtgtcgatgtctgtgtcgtgtc 25863179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 2577190 - 2577231
Alignment:
Q  174 acatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| |||||| |||||||||| |||||||||||||||||    
T  2577190 acatatgattacactaaattatgtcattttctcaaattatta 2577231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 16881185 - 16881144
Alignment:
Q  174 acatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| ||||||||||||||||| ||||| |||||||||||    
T  16881185 acatatgattacattaaattatgtcattttttcaaattatta 16881144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 41091263 - 41091308
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||||| | |||||||| |||||||||||| ||||    
T  41091263 cgacacatataattacactgaattatgtgattttctcaaatcatta 41091308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 9449521 - 9449477
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| ||| ||||||| |||||||| |||||||||||||||||    
T  9449521 gacacaaatagttacattgaattatgtgattttctcaaattatta 9449477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 15874207 - 15874247
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaa 209  Q
    |||||||||||||||||||| ||| || |||||||||||||    
T  15874207 ccgacacatataattacattcaatcattttattttctcaaa 15874247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 21576716 - 21576796
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||| ||||||| ||||  ||||||||| |||  |||||| | |||||||| | |||||||| ||||| |||||||||||    
T  21576716 gtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaaattatta 21576796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 41558661 - 41558701
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaatt 211  Q
    ||||||| |||||||||| |||||||| |||||||||||||    
T  41558661 gacacatttaattacattgaattatgtcattttctcaaatt 41558701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 42893440 - 42893368
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||  ||| ||||||||| ||||||| | |||||||| |  ||||||| ||||| |||||||||||    
T  42893440 gtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgattttttcaaattatta 42893368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 143 - 248
Target Start/End: Complemental strand, 90923 - 90818
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgt 242  Q
    ||||||||||  ||| |||||||||  ||||| ||||||||||| | |||||| | |||||||||||||||||||  |||||  |||| |||||||||||    
T  90923 gtgtcggacacgtgttgtgtctgacatcgacatatataattacactgaattatatgattttctcaaattattaatggtgttggtgtgtcagtgtctgtgt 90824  T
Q  243 cgtgtc 248  Q
    ||||||    
T  90823 cgtgtc 90818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 99944 - 99901
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  99944 acacatataattacattgaattatgttattttctaaaattatta 99901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 3e-17; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 33405363 - 33405436
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    ||||| ||||| ||||||||| ||| |||||||||||||||||| ||||||||||  |||||||||||||||||    
T  33405363 gtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatgtgtttttctcaaattattaa 33405436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 4298884 - 4298970
Alignment:
Q  162 tctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    |||||| ||||||| | ||||||||||||||||||| ||||| ||||||||||||   ||| | ||||||||| |||||||||||||    
T  4298884 tctgacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtc 4298970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 14134767 - 14134679
Alignment:
Q  155 tgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtc 243  Q
    |||||||| |||| |||||| ||||||||||| | |||||||| ||||||||||||||||| || ||| |||||||  ||||| |||||    
T  14134767 tgtcgtgtttgacaccgacatatataattacactgaattatgtgattttctcaaattattagtattgtcgacgtgtccgtgtcggtgtc 14134679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 12606825 - 12606880
Alignment:
Q  160 tgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||| |||||||||||||||||||| |||||| | |||||||||||||||||    
T  12606825 tgtctgacaccgacacatataattacattgaattatatgattttctcaaattatta 12606880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 13018329 - 13018255
Alignment:
Q  175 catataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtct 249  Q
    ||||| |||||| |||||||||| ||||| ||||||||||||   | ||||||||||||||||||||| ||||||    
T  13018329 catatcattacactaaattatgtgattttgtcaaattattaacggtattgacgtgttagtgtctgtgttgtgtct 13018255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 31236582 - 31236628
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||    
T  31236582 ccgacacatataattacattgaattatgtgattttctcaaattatta 31236628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 8798838 - 8798883
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||    
T  8798838 gacacatataattatattgaattatgttattttctcaaattattaa 8798883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 20873157 - 20873044
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagt 234  Q
    ||||||| || |||||||  | ||||||| ||| ||||||| | |||||||| |||||||||| ||||| |||||||||||   |||| | ||||| |||    
T  20873157 gtgtctcggtatcggacacgtatcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagt 20873058  T
Q  235 gtctgtgtcgtgtc 248  Q
    ||| ||||||||||    
T  20873057 gtccgtgtcgtgtc 20873044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 3025639 - 3025559
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||| ||||||| ||||  ||||||||| ||| | ||||| |||||||||| | |||||||| |||||||||||||||||    
T  3025639 gtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattttctcaaattatta 3025559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 13203688 - 13203616
Alignment:
Q  176 atataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    ||||||||||| | |||||||| ||||||||||||||||| |  ||||||||| | ||||| |||||||||||    
T  13203688 atataattacactgaattatgtaattttctcaaattattagtgttgttgacgtatcagtgtttgtgtcgtgtc 13203616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 13844591 - 13844647
Alignment:
Q  159 gtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||| ||| |||||||||||||||||| | |||||||| |||||||||||||||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattatta 13844647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 20785472 - 20785516
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||    
T  20785472 gacacatataattacattaaattatgtgatttcctcaaattatta 20785516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 3508103 - 3508060
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||| |||||||| ||||||||||||||||||||||||||    
T  3508103 acacatatgattacattgaattatgttattttctcaaattatta 3508060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 4786328 - 4786391
Alignment:
Q  154 atgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaat 217  Q
    ||||||| || ||| |||||||||||||||||| | |||||||| ||||||| |||||||||||    
T  4786328 atgtcgtatccgacaccgacacatataattacactgaattatgtgattttcttaaattattaat 4786391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 14731763 - 14731720
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||| |||||||||| |||||||||||||||||    
T  14731763 acacatataattacactaaattatgtgattttctcaaattatta 14731720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 4611588 - 4611542
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||| ||||||||||||| | ||||||||||||||||||||||||||    
T  4611588 ccgagacatataattacactgaattatgttattttctcaaattatta 4611542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 25172703 - 25172749
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||||||    
T  25172703 ccgacacatataattacattaaaatatgtaattttatcaaattatta 25172749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 39954288 - 39954330
Alignment:
Q  173 cacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  39954288 cacatataattacactaaattatgtgattttctcaaattatta 39954330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 248
Target Start/End: Original strand, 926767 - 926872
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgt 242  Q
    ||||||||||  ||||| ||| ||| ||||||| |||||||||| | ||  |||  |||||||||||||||||  | ||||| ||||| |||||| ||||    
T  926767 gtgtcggacacgtgtcgcgtccgacaccgacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtgtccgtgt 926866  T
Q  243 cgtgtc 248  Q
    ||||||    
T  926867 cgtgtc 926872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 14227263 - 14227210
Alignment:
Q  182 ttacattaaattatgttattttctcaaattattaataatgttgacgtgttagtg 235  Q
    ||||||| |||||||||||||||||||||||||| |  ||||||||||| ||||    
T  14227263 ttacattgaattatgttattttctcaaattattattggtgttgacgtgtcagtg 14227210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 248
Target Start/End: Original strand, 22197757 - 22197826
Alignment:
Q  179 taattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    |||||||| |||||||||| | ||| |||||||||||    ||||| |||||||||||||||||||||||    
T  22197757 taattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtc 22197826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 31557076 - 31557004
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    ||||||||||| ||||||||||||| |||| || | |||||||| | |||||||| ||||| ||||||||||||    
T  31557076 gtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtgatttt-tcaaattattaa 31557004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 34201056 - 34201097
Alignment:
Q  174 acatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||| |||||||| |||||||||||||||||    
T  34201056 acatataattacattgaattatgtcattttctcaaattatta 34201097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 34897138 - 34897093
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||||| | |||||||| |||||||||||||||||    
T  34897138 cgacacatataattacactgaattatgtgattttctcaaattatta 34897093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 37225753 - 37225794
Alignment:
Q  174 acatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| |||||||| ||||||||||||||||||||||||||    
T  37225753 acatatgattacattgaattatgttattttctcaaattatta 37225794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 12985456 - 12985400
Alignment:
Q  159 gtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||| ||| |||||| |||| |||||||| |||||||| |||||||||||||||||    
T  12985456 gtgtccgacaccgacatatatgattacattgaattatgtgattttctcaaattatta 12985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 20679374 - 20679446
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||  ||| | ||||||| ||||||| |||||||||| | || ||||| |||||||||||||||||    
T  20679374 gtgtcggacacgtgttgcgtctgacaccgacacttataattacactgaactatgtgattttctcaaattatta 20679446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 3677840 - 3677757
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctgat 252  Q
    |||| ||||||||||||||  |||||||| ||||| | |||||||||||  ||| || |||| ||| || ||||||||||||||    
T  3677840 ccgatacatataattacatagaattatgtgattttttaaaattattaattgtgtcgatgtgtcagtatccgtgtcgtgtctgat 3677757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 11927091 - 11927138
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    |||||||||||||||||| | |||||||| ||||| ||||||||||||    
T  11927091 ccgacacatataattacactgaattatgtgattttatcaaattattaa 11927138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 11944719 - 11944632
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctgatgtcc 256  Q
    |||||||||||||||||| | | |||||| ||||| |||||||||||| | ||| | ||||||||  || ||||||||| || |||||    
T  11944719 ccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggcgtgttagcatccgtgtcgtgtttggtgtcc 11944632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 255
Target Start/End: Complemental strand, 26529788 - 26529709
Alignment:
Q  176 atataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctgatgtc 255  Q
    ||||||||||  |||||||||| ||||||||||||||| || | | ||| ||||| ||| ||||||| || |||||||||    
T  26529788 atataattaccctaaattatgtgattttctcaaattatcaacattattggcgtgtcagtatctgtgttgtatctgatgtc 26529709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 27213602 - 27213555
Alignment:
Q  168 tccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||||||| | |||||||| ||||||| |||||||||    
T  27213602 tccgacacatataattacagtgaattatgtgattttctgaaattatta 27213555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 36934721 - 36934646
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgt 247  Q
    ||||||||||||||| | |||||||| ||||| || ||||||||    ||| |||||||||||||| |||||||||    
T  36934721 acacatataattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgt 36934646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 7658517 - 7658471
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| ||||||||||| | |||||||| |||||||||||||||||    
T  7658517 ccgacaaatataattacactgaattatgtaattttctcaaattatta 7658471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 15816134 - 15816180
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||| |||||||||| |||||||||| ||||| |||||||||||    
T  15816134 ccgacacttataattacactaaattatgtgattttttcaaattatta 15816180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 243
Target Start/End: Complemental strand, 18964231 - 18964157
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtc 243  Q
    |||||||||||||||||||| |||||||| ||||||| |||  |||| |  | ||||||||| |||||| |||||    
T  18964231 ccgacacatataattacattgaattatgtgattttctaaaaaaattagttgtcttgacgtgtcagtgtcagtgtc 18964157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 258
Target Start/End: Complemental strand, 29358031 - 29357941
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctc-aaattattaataatgttgacgtgttagtgtctgtgtcgtgtctgatgtccat 258  Q
    ||||||||||||| ||||||||||||||| | ||| || |||||||||| | | | ||||| | ||||||| ||||||||| | |||||||    
T  29358031 ccgacacatataaatacattaaattatgtgagtttttcaaaattattaacagtatcgacgtatcagtgtctatgtcgtgtccggtgtccat 29357941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 44505138 - 44505184
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||| ||||||||||||||||||| ||||||| | |||||||||    
T  44505138 ccgacacttataattacattaaattatattattttgtaaaattatta 44505184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 230
Target Start/End: Original strand, 2648269 - 2648314
Alignment:
Q  185 cattaaattatgttattttctcaaattattaataatgttgacgtgt 230  Q
    |||| |||||||||||||||||||||||||| |  |||||||||||    
T  2648269 catttaattatgttattttctcaaattattattggtgttgacgtgt 2648314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 25886978 - 25887046
Alignment:
Q  148 ggacatatgtcgtgtctgactccgacacatataattacattaaattatgtta-ttttctcaaattattaa 216  Q
    |||||| ||||||||| ||| | ||||| ||||||||||||||||||||| | |||| ||||||||||||    
T  25886978 ggacatgtgtcgtgtccgacac-gacacttataattacattaaattatgtaatttttttcaaattattaa 25887046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 30133201 - 30133160
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattat 213  Q
    ||||||||||||||  | ||||||||||||||||||||||||    
T  30133201 acacatataattaccctcaattatgttattttctcaaattat 30133160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 8917247 - 8917287
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaatt 211  Q
    ||||||| | |||||||| ||||||||||||||||||||||    
T  8917247 gacacatctgattacattcaattatgttattttctcaaatt 8917287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 11803310 - 11803266
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattattaa 216  Q
    ||||||||||||||| | |||||||| ||||||| ||||||||||    
T  11803310 acacatataattacactgaattatgtgattttcttaaattattaa 11803266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 22430949 - 22430989
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaa 209  Q
    |||||||| ||||||||||||||| |||| |||||||||||    
T  22430949 ccgacacacataattacattaaatcatgtcattttctcaaa 22430989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 24362209 - 24362253
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||| | |||||||| ||| |||||||||||||    
T  24362209 gacacatataattacactgaattatgtgattctctcaaattatta 24362253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 29198490 - 29198530
Alignment:
Q  175 catataattacattaaattatgttattttctcaaattatta 215  Q
    ||||| |||||||| |||||||| |||||||||||||||||    
T  29198490 catatgattacattgaattatgtcattttctcaaattatta 29198530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 33697141 - 33697213
Alignment:
Q  164 tgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgt 236  Q
    |||| ||||||| |||  ||| ||| |||||| |||||||||||||||||||  ||||| ||| |||||||||    
T  33697141 tgacaccgacacgtatggttatattcaattattttattttctcaaattattatcaatgtcgacatgttagtgt 33697213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 250
Target Start/End: Complemental strand, 7086849 - 7086768
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctg 250  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||  | ||  |||||||  ||||||||||||||||||    
T  7086849 ccgacacatataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtctg 7086768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 135 - 212
Target Start/End: Original strand, 13360344 - 13360420
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaatta 212  Q
    ||||||||||||||||||| ||| ||||||||| |||| ||||||||||||| | |||||||| ||||||||||||||    
T  13360344 gtgtctcagtgtcggacat-tgttgtgtctgacaccgaaacatataattacactgaattatgtgattttctcaaatta 13360420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 17841560 - 17841640
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||||| |||||||||| ||| ||| ||| | |||||||| |||||||||| ||||| |||||||||||    
T  17841560 gtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaaattatta 17841640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 7378048 - 7377991
Alignment:
Q  154 atgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaatt 211  Q
    |||||||||| ||| |||||||||||||||||||| |||||||| |||||||||||||    
T  7378048 atgtcgtgtccgacaccgacacatataattacattgaattatgtgattttctcaaatt 7377991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 7265572 - 7265644
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||| | | ||||| ||| |||||||||||||||||| | |||||||| |||||||||||||||||    
T  7265572 gtgtcggacatgtattgtgtccgacaccgacacatataattacactgaattatgtgattttctcaaattatta 7265644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 33001280 - 33001340
Alignment:
Q  155 tgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| ||| |||||||||||||||||||| |||||||| ||||| |||||||||||    
T  33001280 tgtcgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattatta 33001340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 30866148 - 30866195
Alignment:
Q  168 tccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  30866148 tccgacacatataattacattgaattatgtgattttctcaaattatta 30866195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 216
Target Start/End: Original strand, 5732504 - 5732562
Alignment:
Q  158 cgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    |||||| ||| |||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  5732504 cgtgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaa 5732562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 9195759 - 9195805
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||    
T  9195759 ccgacacatataattacactaaattatgtcattttctcaaattatta 9195805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 9617488 - 9617442
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||    
T  9617488 ccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 9629437 - 9629392
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatt 214  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||    
T  9629437 ccgacacatataattacattgaattatgtgattttctcaaattatt 9629392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 13851789 - 13851712
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgt 247  Q
    ||||||||||||||||| | ||||| ||||||||||||||||||||    ||| ||||||| |||||| |||||||||    
T  13851789 cgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 19040425 - 19040360
Alignment:
Q  150 acatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||| ||||||||| ||| | |||||||||||||||| | |||||||| |||||||||||||||||    
T  19040425 acatgtgtcgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattatta 19040360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 215
Target Start/End: Original strand, 32298549 - 32298658
Alignment:
Q  106 atgaagcatgaccactcatcgaattaattgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttct 205  Q
    ||||||||||| |||||||| |||||   ||||    |||| ||||||||||| |||||||| || ||||||||||||||| |||||||||| ||  |||    
T  32298549 atgaagcatgaacactcatcaaattaggcgtgttctggtgttggacatatgtcatgtctgacaccaacacatataattacactaaattatgtgatgatct 32298648  T
Q  206 caaattatta 215  Q
     |||||||||    
T  32298649 taaattatta 32298658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 250
Target Start/End: Original strand, 8805586 - 8805658
Alignment:
Q  178 ataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctg 250  Q
    ||||||||| |||||||||| |||||||||||||||||  | ||  |||||||  ||||||||||||||||||    
T  8805586 ataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtctg 8805658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 15443742 - 15443682
Alignment:
Q  176 atataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgt 236  Q
    ||||||||| ||| |||||||||||||||||||||||||| | |||| ||||||| |||||    
T  15443742 atataattatattgaattatgttattttctcaaattattattgatgtcgacgtgtcagtgt 15443682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 7977810 - 7977881
Alignment:
Q  144 tgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||| ||||| ||| ||||||| | |||||||| | |||||||| ||||| |||||||||||    
T  7977810 tgtcggacatatgttgtgtccgacaccgacacttgtaattacactgaattatgtaattttttcaaattatta 7977881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 250
Target Start/End: Complemental strand, 9658947 - 9658852
Alignment:
Q  155 tgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctg 250  Q
    |||||||||| || |||||| ||||||||||| | |||||||| ||||||| |||||||||    ||| | ||||| |||||| ||||||||||||    
T  9658947 tgtcgtgtctaacaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtctg 9658852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 248
Target Start/End: Original strand, 426508 - 426598
Alignment:
Q  158 cgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    |||||| ||| ||||||| | |||||||||| |||||||| ||||| ||||||||||||   ||| | ||||| |||||| ||||||||||    
T  426508 cgtgtccgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtc 426598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 9025499 - 9025545
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||||| | |||||||| |||||||||||||||||    
T  9025499 ccgacacatataattacactgaattatgtgattttctcaaattatta 9025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 16833376 - 16833283
Alignment:
Q  155 tgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    |||||||||| || ||||||| | |||||||| | || ||||| ||||| ||||||||||| |  ||| | ||||| |||||||||||||||||    
T  16833376 tgtcgtgtctaacaccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtc 16833283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 17168945 - 17168880
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtc 237  Q
    ||||||||| ||||||| |||||||| ||||| |||||||||||  ||||| |||||||| |||||    
T  17168945 acacatatagttacattgaattatgtcattttttcaaattattatcaatgtcgacgtgtttgtgtc 17168880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 31579211 - 31579277
Alignment:
Q  148 ggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    |||||| ||||||||| ||| ||||||||||  |||||| | |||||||| ||||||||||||||||||    
T  31579211 ggacatgtgtcgtgtccgacaccgacacata--attacactgaattatgtgattttctcaaattattaa 31579277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 12627548 - 12627628
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||| ||||||||||| ||| ||||| |||  |||||||||| |||||| | |||||||| ||||| ||| |||||||    
T  12627548 gtgtctcggtgtcggacatgtgtggtgtccgacatcgacacatattattacactgaattatgtgattttttcacattatta 12627628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 24614498 - 24614418
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||| ||| || |||||| ||| || ||||||| ||||||| |||||||| | ||||| | |||||||||    
T  24614498 gtgtctcagtgtcgggcatctgccgtgtccgacaccaacacatacaattacactaaattatataatttttttaaattatta 24614418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 256
Target Start/End: Complemental strand, 7625168 - 7625089
Alignment:
Q  177 tataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctgatgtcc 256  Q
    |||||||| | |||||||| | |||||||||||||||||    ||| |||||||  |||||||||||||||| |||||||    
T  7625168 tataattatactaaattatatcattttctcaaattattatccgtgtcgacgtgtcggtgtctgtgtcgtgtccgatgtcc 7625089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 15489737 - 15489816
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    ||||||| | |||||||||| |||| ||| ||||| ||||||||||| |  ||| |||||||||||||| |||| |||||    
T  15489737 ccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccgtgttgtgtc 15489816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 21885843 - 21885800
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||| |||||||||||||||||| | |||||||||    
T  21885843 acacatataattagattaaattatgttatttttttaaattatta 21885800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 214
Target Start/End: Original strand, 26314625 - 26314684
Alignment:
Q  155 tgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatt 214  Q
    |||||| |||||| |||||| ||||||||||||| |||||| | ||||| ||||||||||    
T  26314625 tgtcgtatctgaccccgacatatataattacattgaattatatgattttttcaaattatt 26314684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 32511646 - 32511717
Alignment:
Q  144 tgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||| |||||||||||| || ||| || |||| |||||||||| | |||||||| ||||||| |||||||||    
T  32511646 tgtcagacatatgtcgtatccgacaccaacacttataattacactgaattatgtgattttcttaaattatta 32511717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 34073352 - 34073431
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    ||||| |||||||||||| | |||||||  |||||||||||||||||   |||||| | ||| |||||| ||||||||||    
T  34073352 ccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtc 34073431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 4864127 - 4864073
Alignment:
Q  159 gtgtctgactccgacacatataattacattaaattatgttattttctcaaattat 213  Q
    ||||| ||| || ||||||||||||| |||||||||||| ||||| |||||||||    
T  4864127 gtgtccgacaccaacacatataattaaattaaattatgtcattttttcaaattat 4864073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 213
Target Start/End: Original strand, 9024183 - 9024225
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattat 213  Q
    ||||||||| |||||||| |||||||| |||||||||||||||    
T  9024183 gacacatatgattacattgaattatgtcattttctcaaattat 9024225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 17168469 - 17168547
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    |||||| ||| |||||| |||||||| | |||||||||||||||||  | ||||| ||||| ||||||| |||| ||||    
T  17168469 cgacacctattattacactaaattatatcattttctcaaattattatcagtgttggcgtgtcagtgtctatgtcatgtc 17168547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 20371115 - 20371161
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||| ||||| | |||||| |||||||||||||||||    
T  20371115 ccgacacatataatcacattgagttatgtgattttctcaaattatta 20371161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 25038086 - 25038152
Alignment:
Q  179 taattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgt 245  Q
    |||||||| |||||||||| ||||||||||||||||||   |||  |||||| ||| ||||||||||    
T  25038086 taattacactaaattatgtaattttctcaaattattaacggtgtcaacgtgtcagtatctgtgtcgt 25038152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 26178686 - 26178732
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||| |||||| |||||||||| ||||| |||||||||||    
T  26178686 ccgacacatatgattacactaaattatgtgattttatcaaattatta 26178732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 32299329 - 32299283
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||| ||||| |||||| |||||||| |||||||||||||||||    
T  32299329 ccgacacgtataactacattgaattatgtgattttctcaaattatta 32299283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 248
Target Start/End: Complemental strand, 34595223 - 34595109
Alignment:
Q  134 tgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttag 233  Q
    |||||| | ||||| ||||  ||||||||| ||| ||||||| | |||||||| | |||||||| ||||| ||||||||||| |  ||| | ||||| |     
T  34595223 tgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcat 34595124  T
Q  234 tgtctgtgtcgtgtc 248  Q
    |||| ||||||||||    
T  34595123 tgtccgtgtcgtgtc 34595109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 7112830 - 7112789
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaatta 212  Q
    |||||||||||||||||| |||||| | ||||||||||||||    
T  7112830 gacacatataattacatttaattatttcattttctcaaatta 7112789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 8781315 - 8781356
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaatta 212  Q
    |||||||||||||||||| |||||| | ||||||||||||||    
T  8781315 gacacatataattacatttaattatttcattttctcaaatta 8781356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 8931608 - 8931649
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaatt 211  Q
    ||||||||||||||| | | ||||||||||||||||||||||    
T  8931608 cgacacatataattatactgaattatgttattttctcaaatt 8931649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 10842585 - 10842540
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||| |||||| |||||||||| ||||| |||||||||||    
T  10842585 cgacacatatgattacactaaattatgtgattttttcaaattatta 10842540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 211
Target Start/End: Original strand, 11591876 - 11591917
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaatt 211  Q
    ||||||||||||||||| | |||||||| |||||||||||||    
T  11591876 cgacacatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 13211298 - 13211347
Alignment:
Q  181 attacattaaattatgttattttctcaaattattaataatgttgacgtgt 230  Q
    |||| |||||||||||| |||||||||||||||||  ||||| |||||||    
T  13211298 attatattaaattatgtcattttctcaaattattatcaatgtcgacgtgt 13211347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 24832641 - 24832596
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||||| ||||||||   |||||||||||||||||    
T  24832641 cgacacatataattacactaaattataagattttctcaaattatta 24832596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 26562742 - 26562701
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaatt 211  Q
    ||||||||||||||||| | |||||||| |||||||||||||    
T  26562742 cgacacatataattacactgaattatgtgattttctcaaatt 26562701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 30851668 - 30851610
Alignment:
Q  155 tgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| ||| |||||||||||||||||||| |||  ||| ||||||| |||||||||    
T  30851668 tgtcgtgtccgacaccgacacatataattacattgaat--tgtgattttcttaaattatta 30851610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 32978878 - 32978951
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgt-tattttctcaaattatta 215  Q
    ||||||||||| ||||||||| ||| ||||||| | |||||||| | |||||||| | |||| |||||||||||    
T  32978878 gtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgtgttttttttcaaattatta 32978951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 33340915 - 33340996
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcg-tgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||| |||||||||||| | |||| | |||||| || |||||||| ||| |||| | |||||| |||||||||||||||||    
T  33340915 gtgtcccagtgtcggacacacgtcgatatctgacaccaacacatatgattccattgagttatgtgattttctcaaattatta 33340996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 35125183 - 35125102
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcg-tgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||| |||||||||||| | |||| | |||||| || |||||||| ||| |||| | |||||| |||||||||||||||||    
T  35125183 gtgtcccagtgtcggacacacgtcgatatctgacaccaacacatatgattccattgagttatgtgattttctcaaattatta 35125102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 853830 - 853910
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||  ||||||||| ||||||| || ||| ||||||| | ||||| || | |||||||| ||||| |||||||||||    
T  853830 gtgtctctatgtcggacacatgtcgtatccgacaccgacacttgtaattgcacttaattatgtgattttttcaaattatta 853910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 2769139 - 2769107
Alignment:
Q  171 gacacatataattacattaaattatgttatttt 203  Q
    |||||||||||||||||| ||||||||||||||    
T  2769139 gacacatataattacattcaattatgttatttt 2769107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 5462733 - 5462693
Alignment:
Q  176 atataattacattaaattatgttattttctcaaattattaa 216  Q
    ||||||||||| | |||||||| ||||||||||||||||||    
T  5462733 atataattacaatgaattatgtgattttctcaaattattaa 5462693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 7938180 - 7938124
Alignment:
Q  159 gtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||| ||| ||||||| |||||||||| |||||||| | ||||| |||||||||||    
T  7938180 gtgtcggacaccgacacttataattacactaaattatatgattttttcaaattatta 7938124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 17302399 - 17302355
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||||  ||||||||| ||||||| |||||||||    
T  17302399 gacacatataattacacaaaattatgtgattttcttaaattatta 17302355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 21924930 - 21924986
Alignment:
Q  159 gtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||| ||| |||||||||||||||||| | |||||| | || ||||||||||||||    
T  21924930 gtgtccgacaccgacacatataattacactgaattatttgatattctcaaattatta 21924986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 215
Target Start/End: Complemental strand, 28715363 - 28715303
Alignment:
Q  155 tgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| ||| ||||||| | |||||||| | |||||||| ||||| |||||||||||    
T  28715363 tgtcgtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattatta 28715303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 33419237 - 33419181
Alignment:
Q  159 gtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| || ||||||||||||||||| |||||| | | ||| |||||||||||    
T  33419237 gtgtctgacaccaacacatataattacattgaattatatcaatttttcaaattatta 33419181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 33468389 - 33468433
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||| ||||||||||||| ||||| |||||||| |||||||||||    
T  33468389 gacatatataattacattgaattaagttattttttcaaattatta 33468433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 33950200 - 33950144
Alignment:
Q  159 gtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||    
T  33950200 gtgtctgacaccgacacatatgattacattaaattatgtgattttctcaaattatta 33950144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 230
Target Start/End: Complemental strand, 48139344 - 48139257
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgt 230  Q
    |||||| |||| |||||||||||||  | |||||||||||||||||||||||||  ||| |||||||||||||| | ||| |||||||    
T  48139344 gtgtcgaacatgtgtcgtgtctgacatcaacacatataattacattaaattatgagattatctcaaattattaacagtgtcgacgtgt 48139257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 247
Target Start/End: Complemental strand, 28158060 - 28157984
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgt 247  Q
    |||||||||||||||||||||| |||| ||||| |||||||||||  ||| || | |||||||||| ||||||||||    
T  28158060 gacacatataattacattaaatcatgtcattttttcaaattattagcaatattcatgtgttagtgtatgtgtcgtgt 28157984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 7214522 - 7214573
Alignment:
Q  164 tgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||| ||||| ||||||||||||||||||||||| |||||||||||||||||    
T  7214522 tgacaccgacgcatataattacattaaattatgtgattttctcaaattatta 7214573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 30103337 - 30103406
Alignment:
Q  144 tgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatt 214  Q
    |||| |||||||||||||| |||| ||||||||||| |||||| | |||||||| ||||||||||||||||    
T  30103337 tgtcagacatatgtcgtgtttgacaccgacacatatgattacact-aattatgtgattttctcaaattatt 30103406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 215
Target Start/End: Complemental strand, 4157254 - 4157158
Alignment:
Q  118 cactcatcgaattaattgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||| ||||||||  ||| |||| ||||||||||| ||||||||| ||| ||||||| | ||||| || |||||||||| ||||| |||||||||||    
T  4157254 cactcctcgaattaggtgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgatttt-tcaaattatta 4157158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 5775358 - 5775411
Alignment:
Q  164 tgactccgacacatataattacattaaattatgttattttctcaaattattaat 217  Q
    |||| |||||||||||||||||| | |||||||| |||||||||||||||||||    
T  5775358 tgacaccgacacatataattacacttaattatgtgattttctcaaattattaat 5775411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 14126118 - 14126195
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    ||||| |||||||||| | |||||||| | ||| |||||||||||| | ||| | |||||||||||||||||||||||    
T  14126118 gacacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtctgtgtcgtgtc 14126195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 19230315 - 19230360
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||    
T  19230315 cgacacctataattacattgaattatgttattttctcaaattatta 19230360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 8423697 - 8423769
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||  ||||||||| ||| ||||||  |||||||||| | |||||||| |||||||||||||||||    
T  8423697 gtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaattatta 8423769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 248
Target Start/End: Complemental strand, 36635375 - 36635299
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    ||||||||||||||| | |||||||| ||||||||||||||||| |  ||||| ||||| |||||| | ||||||||    
T  36635375 acacatataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtc 36635299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 243
Target Start/End: Original strand, 40179615 - 40179715
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgt 242  Q
    |||||| |||| ||||||||| ||| ||||| |||||||||||| | |||||||| ||||| ||||| |||||||  |||  |||||| |||||| ||||    
T  40179615 gtgtcgaacatgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgtgt 40179714  T
Q  243 c 243  Q
    |    
T  40179715 c 40179715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 12895254 - 12895325
Alignment:
Q  144 tgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||| | |||||||||| ||| ||||||| ||||||||||  ||||||||| ||||| |||||||||||    
T  12895254 tgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgattttttcaaattatta 12895325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 21345526 - 21345608
Alignment:
Q  157 tcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctg 239  Q
    ||||||||||| |||||| | || |||||||| | |||||||||||| ||||||||||| |  |||||||||||  |||||||    
T  21345526 tcgtgtctgacaccgacataaatgattacattgagttatgttattttttcaaattattattggtgttgacgtgtgcgtgtctg 21345608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 2361945 - 2362026
Alignment:
Q  134 tgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||| ||||| ||||   |||||||| ||| ||||||| | |||||||| |||||||||| ||||| |||||||||||    
T  2361945 tgtgtctcggtgtcagacacgagtcgtgtccgacaccgacacttttaattacactaaattatgtaattttttcaaattatta 2362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 244
Target Start/End: Original strand, 9299062 - 9299134
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcg 244  Q
    |||||||||||||||| | ||| || |||||||||||||||||||  ||||||| ||||| ||||||| |||||    
T  9299062 gacacatataattacacttaat-atattattttctcaaattattagcaatgttggcgtgtcagtgtctatgtcg 9299134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 9996922 - 9996849
Alignment:
Q  141 cagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatt 214  Q
    ||||||||||||  |||  |||||||| |||| ||||||||||| | | |||||||| ||||||||||||||||    
T  9996922 cagtgtcggacacgtgttatgtctgacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 17344554 - 17344513
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaat 210  Q
    ||||||||||||||||||||||||||||| ||||||| ||||    
T  17344554 ccgacacatataattacattaaattatgtgattttcttaaat 17344513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 256
Target Start/End: Original strand, 27706192 - 27706269
Alignment:
Q  179 taattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctgatgtcc 256  Q
    |||||||| |||||||||| ||||| | |||||||||||  ||| ||||||| ||||||  ||||||||||| |||||    
T  27706192 taattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtctggtgtcc 27706269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 215
Target Start/End: Original strand, 28964190 - 28964299
Alignment:
Q  106 atgaagcatgaccactcatcgaattaattgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttct 205  Q
    ||||||||||  ||||| ||| ||||   ||||| |||||||||| || ||||||||| ||| | ||||| | |||||||| | |||||||| ||||| |    
T  28964190 atgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgatttttt 28964289  T
Q  206 caaattatta 215  Q
    ||||||||||    
T  28964290 caaattatta 28964299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 35723391 - 35723436
Alignment:
Q  171 gacacatataattacattaaattatgt-tattttctcaaattatta 215  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||    
T  35723391 gacacatataattacattgaattatgtgtattttctcaaattatta 35723436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 44081584 - 44081629
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    ||||||||||||||||||||||||| | ||||| ||||||||||||    
T  44081584 gacacatataattacattaaattatatgattttttcaaattattaa 44081629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 44796971 - 44797012
Alignment:
Q  173 cacatataattacattaaattatgttattttctcaaattatt 214  Q
    ||||| |||||||||| |||||||||||||||||||||||||    
T  44796971 cacatgtaattacattgaattatgttattttctcaaattatt 44797012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 203
Target Start/End: Complemental strand, 4157556 - 4157456
Alignment:
Q  103 acaatgaagcatgaccactcatcgaattaattgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattt 202  Q
    ||||||||||||   ||||| ||||||||   || |||| ||||||||||| ||||||||| ||| ||||||| | ||||| || |||||||||| ||||    
T  4157556 acaatgaagcatagacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgattt 4157457  T
Q  203 t 203  Q
    |    
T  4157456 t 4157456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 18513248 - 18513292
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| |||||||| |||||||| |||||||||||||||||    
T  18513248 gacacatatgattacattgaattatgtcattttctcaaattatta 18513292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 21945583 - 21945511
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||| |||| |||| ||| ||||||| | |||||||| | |||||||| ||||| |||||||||||    
T  21945583 gtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattatta 21945511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 29205524 - 29205452
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||| |||||||||  || ||||||| | |||||||| | |||||||| ||||| |||||||||||    
T  29205524 gtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 29205452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 54580014 - 54580074
Alignment:
Q  155 tgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| ||| ||||||| |||||||||| | |||||||| ||||| |||||||||||    
T  54580014 tgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattatta 54580074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 10013955 - 10013912
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||||||||||| ||||||| | |||||||||    
T  10013955 acacatataattacattaaattatattattttgtaaaattatta 10013912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 10021096 - 10021053
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||||||||||| ||||||| | |||||||||    
T  10021096 acacatataattacattaaattatattattttgtaaaattatta 10021053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 13134503 - 13134460
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattat 213  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||    
T  13134503 cgacacatataattacactaaattatgtgattttcttaaattat 13134460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 14465298 - 14465345
Alignment:
Q  168 tccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||| |||| ||| |||||||| |||||||||||||||||    
T  14465298 tccgacacatatgattaaattgaattatgtcattttctcaaattatta 14465345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 22440609 - 22440652
Alignment:
Q  173 cacatataattacattaaattatgttattttctcaaattattaa 216  Q
    |||||||||||||| | |||||||| ||||||||||||||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaa 22440652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 215
Target Start/End: Complemental strand, 40613505 - 40613458
Alignment:
Q  168 tccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||||||| | |||||||| ||||||||||| |||||    
T  40613505 tccgacacatataattacactgaattatgtgattttctcaaaatatta 40613458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 40742644 - 40742597
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattattaat 217  Q
    ||||||||||||||||| || ||||| | |||||||||||||||||||    
T  40742644 cgacacatataattacactagattatatgattttctcaaattattaat 40742597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 903971 - 903929
Alignment:
Q  174 acatataattacattaaattatgttattttctcaaattattaa 216  Q
    ||||||||||||| | |||||||| ||||||||||||||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattattaa 903929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 5555137 - 5555171
Alignment:
Q  169 ccgacacatataattacattaaattatgttatttt 203  Q
    ||||||||||||||||||||||||||| |||||||    
T  5555137 ccgacacatataattacattaaattatcttatttt 5555171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 8402721 - 8402787
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaa 209  Q
    ||||||||||  ||||||||||||| | || ||||||||||||| | |||||| | |||||||||||    
T  8402721 gtgtcggacaagtgtcgtgtctgacactgagacatataattacactgaattatatgattttctcaaa 8402787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 12077869 - 12077815
Alignment:
Q  182 ttacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgt 236  Q
    ||||||| |||||||| |||||||||||||||||| | | ||||||||| |||||    
T  12077869 ttacattgaattatgtgattttctcaaattattaacagtattgacgtgtcagtgt 12077815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 40224503 - 40224541
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctca 207  Q
    ||||||||||| ||||||||||||||||| |||||||||    
T  40224503 ccgacacatatgattacattaaattatgtcattttctca 40224541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 44362734 - 44362680
Alignment:
Q  155 tgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaa 209  Q
    ||||||||||||| || |||| | | ||||||||||||||||| |||||||||||    
T  44362734 tgtcgtgtctgacaccaacacttgtgattacattaaattatgtcattttctcaaa 44362680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 46180944 - 46180986
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattatt 214  Q
    |||||||| |||||| | |||||||||||||||||||||||||    
T  46180944 acacatatgattacactgaattatgttattttctcaaattatt 46180986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 999354 - 999399
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||||| |||||||| | |||| ||||||||||||    
T  999354 cgacacatataattacactaaattatatgatttactcaaattatta 999399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 10499277 - 10499314
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaa 208  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  10499277 gacacatataattacactaaattatgtgattttctcaa 10499314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 106 - 215
Target Start/End: Complemental strand, 16073511 - 16073403
Alignment:
Q  106 atgaagcatgaccactcatcgaattaattgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttct 205  Q
    ||||||||||  ||||| ||| ||||   |||||| |||||||||||| | ||||||| ||| ||||||| | |||||||| | |||||||  ||||| |    
T  16073511 atgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgcgatttt-t 16073413  T
Q  206 caaattatta 215  Q
    ||||||||||    
T  16073412 caaattatta 16073403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 24343560 - 24343515
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| |||||||||| | |||||||| |||||||||||||||||    
T  24343560 cgacacctataattacactgaattatgtaattttctcaaattatta 24343515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 43300669 - 43300624
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||| |||| |||||||| |||||||| |||||||||||||||||    
T  43300669 cgacaaatatgattacattgaattatgtaattttctcaaattatta 43300624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 3634909 - 3634949
Alignment:
Q  175 catataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||| |||||||| ||| |||||||||||||||||    
T  3634909 catataattagattaaattttgtcattttctcaaattatta 3634949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 3712516 - 3712560
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||||| |||||  | |||||||||||||||||    
T  3712516 gacacatataattacattgaattacatgattttctcaaattatta 3712560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 5177031 - 5176983
Alignment:
Q  176 atataattacattaaattatgttattttctcaaattattaataatgttg 224  Q
    |||| |||||||| |||||||||||||||||||| |||||  |||||||    
T  5177031 atattattacattgaattatgttattttctcaaaatattatcaatgttg 5176983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 6485616 - 6485664
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaat 217  Q
    ||||||| | |||||||| |||||||||| ||||| |||||||||||||    
T  6485616 ccgacacttgtaattacactaaattatgtgattttttcaaattattaat 6485664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 8820461 - 8820389
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgt 242  Q
    |||||||||| | | |||| |||||||| ||||| |||||||||||   |||||||||||| ||||| |||||    
T  8820461 cgacacatatgactccattgaattatgtgattttatcaaattattatcgatgttgacgtgtcagtgtttgtgt 8820389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 11110256 - 11110212
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattatt 214  Q
    |||||||||| |||||||  |||||||| ||||||||||||||||    
T  11110256 cgacacatatgattacatcgaattatgtcattttctcaaattatt 11110212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 23292965 - 23293037
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||  ||||||||| ||| ||||||| | |||||| | | |||||||| ||||| |||||||||||    
T  23292965 gtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaattatta 23293037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 23915181 - 23915137
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||| |||||| ||| ||||||||||||||||||||| ||||    
T  23915181 gacacatgtaattatattgaattatgttattttctcaaatgatta 23915137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 256
Target Start/End: Complemental strand, 28412395 - 28412317
Alignment:
Q  178 ataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctgatgtcc 256  Q
    ||||||||| | |||||||| ||||| ||||||||||||   |||||||||||||||||| |||||||||||| |||||    
T  28412395 ataattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtcc 28412317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 18840983 - 18841064
Alignment:
Q  134 tgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| | ||||||||||| ||||||||||||| ||||||| | |||||||| | |||||||| ||||| |||||||||||    
T  18840983 tgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaattttttcaaattatta 18841064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 40361745 - 40361808
Alignment:
Q  155 tgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaata 218  Q
    ||||||||||||| || ||| ||||||||||| |||||||||| ||||| ||||||||||||||    
T  40361745 tgtcgtgtctgacaccaacagatataattacactaaattatgtaattttttcaaattattaata 40361808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 5367270 - 5367200
Alignment:
Q  145 gtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| || ||||||||| ||| |||||||||||||||||| | |||||||| |||| ||||||||||||    
T  5367270 gtcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattatta 5367200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 173 - 255
Target Start/End: Complemental strand, 35455236 - 35455154
Alignment:
Q  173 cacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctgatgtc 255  Q
    |||||||||||||||| |||||||| | ||||| ||||||| ||| || ||||| |||||||||  |||||||||| ||||||    
T  35455236 cacatataattacatttaattatgtaaatttcttaaattatcaatgatattgacatgttagtgtacgtgtcgtgtccgatgtc 35455154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 44605144 - 44605190
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||    
T  44605144 ccgacacatgtaattacattgaattatgttattttctcaaattatta 44605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 30404829 - 30404902
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    ||||||||||| ||||||||| ||| ||||||| | |||||||| | |||||||| ||||| ||||||||||||    
T  30404829 gtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaa 30404902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 247
Target Start/End: Complemental strand, 35449587 - 35449489
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgt 242  Q
    ||||||||||| |||||||||||||      ||||||||||||| | |||| ||| |||||||||||||||||| | ||||| | ||| ||||| |||||    
T  35449587 gtgtcggacatgtgtcgtgtctgac------acatataattacactgaattctgtgattttctcaaattattaacagtgttggcttgtcagtgtttgtgt 35449494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 36756349 - 36756434
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctgatgt 254  Q
    ||||||| |||||||||| | |||||||||||||  ||||||||||| |  ||| ||||||| |||||||||||||| || |||||    
T  36756349 ccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgtatccgatgt 36756434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 2415405 - 2415325
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||| |||||||||||  ||||||||| || || ||||||||| ||||| | |||||| | |||||||||||||||||    
T  2415405 gtgtctcggtgtcggacatgagtcgtgtctcacaccaacacatatagttacacttaattatataattttctcaaattatta 2415325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 198
Target Start/End: Original strand, 34993924 - 34994016
Alignment:
Q  106 atgaagcatgaccactcatcgaattaattgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgtt 198  Q
    |||||||| || ||||| | ||||||   ||||| |||||||||||| |||||||||  ||| | |||||||||||||||||| |||||||||    
T  34993924 atgaagcacgaacactccttgaattaggcgtgtcccagtgtcggacacatgtcgtgttcgacactgacacatataattacattgaattatgtt 34994016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 19613621 - 19613664
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||| |||||||| ||||||||||||||||||||||||||    
T  19613621 acacatatcattacattgaattatgttattttctcaaattatta 19613664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 30471092 - 30471005
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctgatgtcc 256  Q
    |||||||||||||||||||  |||||||| ||||||||||| |||||  | | |   |||| ||||| ||||||||||||||||||||    
T  30471092 ccgacacatataattacatcgaattatgtgattttctcaaaatattaggagtatcagcgtgctagtgcctgtgtcgtgtctgatgtcc 30471005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 30527600 - 30527647
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    |||||||||||||||||| |||||||| | ||||||||||||||||||    
T  30527600 ccgacacatataattacactaaattatatgattttctcaaattattaa 30527647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 255
Target Start/End: Complemental strand, 15972951 - 15972841
Alignment:
Q  145 gtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcg 244  Q
    ||||||||  ||||||||| ||| ||||||| | |||||||| | |||| ||| ||||| |||||||||||||  ||| | ||||| |||||| ||||||    
T  15972951 gtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgtcg 15972852  T
Q  245 tgtctgatgtc 255  Q
    | |||| ||||    
T  15972851 tatctggtgtc 15972841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 37491850 - 37491900
Alignment:
Q  159 gtgtctgactccgacacatataattacattaaattatgttattttctcaaa 209  Q
    ||||||||| ||||||||| |||||||||| ||||| ||||||||||||||    
T  37491850 gtgtctgacaccgacacatttaattacattgaattaagttattttctcaaa 37491900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 2438698 - 2438770
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||| ||||||||| ||| ||||||| | |||||||| | |||||||| ||||| | |||||||||    
T  2438698 gtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaaattatta 2438770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 18571024 - 18570980
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| |||||||| |||||||| |||||||||||||||||    
T  18571024 gacacatatgattacattgaattatgtcattttctcaaattatta 18570980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 251
Target Start/End: Complemental strand, 30335461 - 30335389
Alignment:
Q  179 taattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctga 251  Q
    |||||||| |||||||||| ||||| ||||||||||| |  ||| | |||| ||||||| |||||||||||||    
T  30335461 taattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtgtctga 30335389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 37411215 - 37411295
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||| ||||||||||||   |||||||  |||  ||||||||||||| ||| | |||||||| |||||||||||||||||    
T  37411215 gtgtcccagtgtcggacacgcgtcgtgttcgacatcgacacatataatcacactgaattatgtgattttctcaaattatta 37411295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 3103540 - 3103599
Alignment:
Q  182 ttacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtg 241  Q
    ||||||| |||||| ||||||||||||||||||| ||||||  |||||| ||||| ||||    
T  3103540 ttacattcaattatcttattttctcaaattattactaatgtccacgtgtcagtgtttgtg 3103599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 21616813 - 21616770
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||| | |||||||| |||||||||||||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattatta 21616770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 215
Target Start/End: Original strand, 2665897 - 2665939
Alignment:
Q  173 cacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||| |||||||||| ||||||| |||||||||    
T  2665897 cacatataattacactaaattatgtgattttctaaaattatta 2665939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 213
Target Start/End: Complemental strand, 13204077 - 13204035
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattat 213  Q
    |||||||||| ||| |||||||||||| |||||||||||||||    
T  13204077 gacacatatagttatattaaattatgtaattttctcaaattat 13204035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 18420439 - 18420485
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||| ||||||| |||| |||||||| |||||||||||||||||    
T  18420439 ccgacacttataattgcattgaattatgtgattttctcaaattatta 18420485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 21782832 - 21782902
Alignment:
Q  178 ataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    ||||||||| | |||||||| |||||||||||||||||  | ||| | ||||| ||||| |||||||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtc 21782902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 23718080 - 23718034
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||||| | |||||||| | |||||||||||||||    
T  23718080 ccgacacatataattacactgaattatgtgactttctcaaattatta 23718034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 248
Target Start/End: Complemental strand, 24011089 - 24011012
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    |||||| ||| |||||| |||||||||| |||||||||||||||||  ||||| | ||| || |||| |||||||||||    
T  24011089 cgacacctatgattacactaaattatgtcattttctcaaattattatcaatgtcggcgt-ttggtgtttgtgtcgtgtc 24011012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 24105752 - 24105706
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||||| | |||||||| | |||||||||||||||    
T  24105752 ccgacacatataattacactgaattatgtgactttctcaaattatta 24105706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 29176463 - 29176545
Alignment:
Q  134 tgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    |||||||||||||||||||| || ||||||  || || |||| |||||||||| | |||||||| |  || ||||||||||||    
T  29176463 tgtgtctcagtgtcggacatgtgccgtgtccaacaccaacacttataattacactgaattatgtgaccttttcaaattattaa 29176545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 36281734 - 36281692
Alignment:
Q  174 acatataattacattaaattatgttattttctcaaattattaa 216  Q
    |||||| |||||| |||||||||| ||||||||||||||||||    
T  36281734 acatatgattacactaaattatgtgattttctcaaattattaa 36281692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 44860374 - 44860328
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||||| | |||||||  |||||||||||||||||    
T  44860374 ccgacacatataattacactgaattatgcgattttctcaaattatta 44860328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 215
Target Start/End: Complemental strand, 4690327 - 4690298
Alignment:
Q  186 attaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||||||||||||||||||    
T  4690327 attaaattatgttattttctcaaattatta 4690298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 242
Target Start/End: Original strand, 12668428 - 12668501
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgt 242  Q
    ||||||| |||||||||| | |||||||| ||||| ||||||||||| | |||| | ||||| ||| |||||||    
T  12668428 ccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtcagtatctgtgt 12668501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 18255974 - 18256031
Alignment:
Q  158 cgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| ||| ||||||| | ||||||||||||||||||| ||||| | |||||||||    
T  18255974 cgtgtccgacaccgacacttctaattacattaaattatgtgatttttttaaattatta 18256031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 18276582 - 18276529
Alignment:
Q  162 tctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| |||||||| ||||||||| | ||||| || |||||||||||||||||    
T  18276582 tctgacaccgacacacataattacactgaattaagtgattttctcaaattatta 18276529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 28121557 - 28121602
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattattaat 217  Q
    ||||||||||||||||| | |||||  |||||||||||||||||||    
T  28121557 acacatataattacattgatttatgccattttctcaaattattaat 28121602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 34691799 - 34691856
Alignment:
Q  158 cgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| ||| |||||||||||||||||| | |||||| | ||||| |||||||||||    
T  34691799 cgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattatta 34691856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 34714211 - 34714268
Alignment:
Q  158 cgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| ||| |||||||||||||||||| | |||||| | ||||| |||||||||||    
T  34714211 cgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattatta 34714268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 250
Target Start/End: Original strand, 34784987 - 34785068
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctg 250  Q
    |||||||||||||||||| |||||||||| ||||||| |||  |||| |  ||| |  |||| |||||| ||||||||||||    
T  34784987 ccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgtgtctg 34785068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 896275 - 896219
Alignment:
Q  159 gtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||| ||| ||||||||||| |||||||| || ||||| ||||||||||| |||||    
T  896275 gtgtccgacgccgacacatatgattacattgaaatatgtgattttctcaaactatta 896219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 37497184 - 37497128
Alignment:
Q  159 gtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| |||||| |||| |||||||| |||| ||  |||||||||||||||||    
T  37497184 gtgtctgacaccgacagatattattacattgaattgtggcattttctcaaattatta 37497128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 70358 - 70285
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    ||||||||||  ||||||||| ||| ||||||| |||||||||| | |||||||||||||| ||||||||||||    
T  70358 gtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttcaaattattaa 70285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 216
Target Start/End: Complemental strand, 28674888 - 28674807
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    |||||||||||| |||||  ||||||||||||| || ||| ||||||||| | | |||||||| ||||||||||||||||||    
T  28674888 gtgtctcagtgttggacaagtgtcgtgtctgacaccaacatatataattatactgaattatgtaattttctcaaattattaa 28674807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 258
Target Start/End: Complemental strand, 9709885 - 9709785
Alignment:
Q  158 cgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctgatgtcca 257  Q
    |||||| ||| ||||||||||||||||||   |||||||| |||||||||||||||||    ||| | | ||| |||||| |||||||||||||||||||    
T  9709885 cgtgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtctgatgtcca 9709786  T
Q  258 t 258  Q
    |    
T  9709785 t 9709785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 22515858 - 22515938
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||| |||||||| || ||||||||| ||| ||||||| | |||||||| |||||||||| ||||| |||||||||||    
T  22515858 gtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 22515938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 34712390 - 34712434
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  34712390 gacacatataattacactaaattatgttattttctcaaattatta 34712434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 36878541 - 36878469
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||| | ||||||| ||| ||||||| |||||||||| | |||||||| |||||||||||||||||    
T  36878541 gtgtcggacatgtttcgtgtcagacaccgacacctataattacactgaattatgtgattttctcaaattatta 36878469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 258
Target Start/End: Original strand, 7918218 - 7918305
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctgatgtccat 258  Q
    |||||||||||||||| | |||||||| ||||||||||||||||| | ||||   ||||| | ||||||||||||||| | |||||||    
T  7918218 gacacatataattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtccggtgtccat 7918305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 14332634 - 14332693
Alignment:
Q  156 gtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||| ||| |||| ||||||||||||| |||||||||| |||||||||||||||||    
T  14332634 gtcgtgtccgacaccgagacatataattacactaaattatgtgattttctcaaattatta 14332693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 21530770 - 21530696
Alignment:
Q  142 agtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    |||||||||||| ||||||||| ||| ||||||| |||||||| |  ||||||| | ||||||||||||||||||    
T  21530770 agtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaa 21530696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 40258912 - 40258986
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaat 217  Q
    ||||||||||  ||||||||||||| ||||||| | |||||||| | |||||||| ||||| |||||||||||||    
T  40258912 gtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttttcaaattattaat 40258986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 41017416 - 41017470
Alignment:
Q  176 atataattacattaaattatgttattttctcaaattattaataatgttgacgtgt 230  Q
    |||||||||||||||||||||| ||||||||||||||||| ||  ||||||||||    
T  41017416 atataattacattaaattatgtcattttctcaaattattactagggttgacgtgt 41017470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 2896103 - 2896172
Alignment:
Q  146 tcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||| |||||||||||||| |||||| |||||  |||| | |||||||| |||||||||||||||||    
T  2896103 tcggacacatgtcgtgtctgacaccgacatatatagctacactgaattatgtgattttctcaaattatta 2896172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 32724105 - 32724150
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||    
T  32724105 gacacatataattacattaaattatgtaaatttctcaaattattaa 32724150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 248
Target Start/End: Original strand, 5927320 - 5927424
Alignment:
Q  144 tgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtc 243  Q
    |||||||||| |||| |||| ||| | ||||| | ||||||||||||||||| | ||||| |||||||||||  | ||||  ||||| |||||| |||||    
T  5927320 tgtcggacatttgtcatgtccgacactgacacttgtaattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtc 5927419  T
Q  244 gtgtc 248  Q
    |||||    
T  5927420 gtgtc 5927424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 248
Target Start/End: Complemental strand, 6427401 - 6427325
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    ||||||||||||||||| |||||||| |||||||||||||||||    ||||| ||||| |||||| ||| ||||||    
T  6427401 acacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtc 6427325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 16164322 - 16164366
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||    
T  16164322 gacacatataattacattaaattatgtgattttttcaaattatta 16164366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 46348354 - 46348434
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||| ||||||||||  ||||||||| ||| ||||||| | |||||||| |||||||| | ||||| |||||||||||    
T  46348354 gtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgattttttcaaattatta 46348434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 48450591 - 48450671
Alignment:
Q  168 tccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    |||||||| | |||||||| |||||||||||||||| |||||||||||    ||||| ||||| |||||| ||||||||||    
T  48450591 tccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtc 48450671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 216
Target Start/End: Original strand, 1864885 - 1864932
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    |||||||||||||||||| | |||||||| ||||||||||||||||||    
T  1864885 ccgacacatataattacactgaattatgtgattttctcaaattattaa 1864932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 39130762 - 39130821
Alignment:
Q  159 gtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaata 218  Q
    ||||| ||| |||||||||||||||||| |||||||| | ||||||| ||||||||||||    
T  39130762 gtgtccgacaccgacacatataattacactaaattatataattttctaaaattattaata 39130821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 16927178 - 16927276
Alignment:
Q  157 tcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctgatgtc 255  Q
    |||| |||||| || ||| ||||||||||| | |||||| | ||||| |||||||||||   |||  ||||||| |||||||||||||||| |||||||    
T  16927178 tcgtatctgacaccaacatatataattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtcgtgtttgatgtc 16927276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 2784652 - 2784563
Alignment:
Q  127 aattaattgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    |||||| ||||||  ||||||||| | | || ||||||||| |||||||||||||||| | | |||||||| ||||||| ||||| ||||    
T  2784652 aattaagtgtgtcctagtgtcggatacacgttgtgtctgacaccgacacatataattatactcaattatgtgattttcttaaatttttaa 2784563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 3921709 - 3921660
Alignment:
Q  181 attacattaaattatgttattttctcaaattattaataatgttgacgtgt 230  Q
    |||||||| |||||||| ||||||||||||||||| | ||||||||||||    
T  3921709 attacattgaattatgtcattttctcaaattattattgatgttgacgtgt 3921660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 9900766 - 9900713
Alignment:
Q  162 tctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| |||||||||||||||| |||| ||| ||||||||| |||||||||||    
T  9900766 tctgacaccgacacatataattatattatattgtgttattttgtcaaattatta 9900713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 11634130 - 11634175
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| ||| |||||||||||||||||| ||||||||||||||||    
T  11634130 cgacacctatgattacattaaattatgttgttttctcaaattatta 11634175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 23804480 - 23804435
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    ||||||||||||||||||||||||| | ||||| ||||||||||||    
T  23804480 gacacatataattacattaaattatataattttatcaaattattaa 23804435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 25272536 - 25272451
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctgatgt 254  Q
    ||||||| |||||||||| |||||||||| ||||||||||||| ||||   |||  | ||||  |||| |||||||||||||||||    
T  25272536 ccgacacttataattacactaaattatgtgattttctcaaattgttaactgtgtcaaagtgtctgtgtttgtgtcgtgtctgatgt 25272451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 38078647 - 38078712
Alignment:
Q  150 acatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||| ||||||||| ||| ||||||| | |||||||||| |||||||| ||||| |||||||||||    
T  38078647 acatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaaattatta 38078712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 39101188 - 39101233
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| |||||||||| | ||||||||||||||||||||||||||    
T  39101188 cgacacctataattacacttaattatgttattttctcaaattatta 39101233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 41877464 - 41877521
Alignment:
Q  158 cgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| ||| ||||||| | |||||||| |||||||||| |||||||||||||||||    
T  41877464 cgtgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattatta 41877521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 43492473 - 43492542
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaatta 212  Q
    ||||||||||| ||| ||||||||| |||||||| |||||||||   ||||| || ||||||||||||||    
T  43492473 gtgtcggacatgtgttgtgtctgacaccgacacacataattacaccgaattacgtgattttctcaaatta 43492542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 2288181 - 2288257
Alignment:
Q  178 ataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtctgatgt 254  Q
    ||||||||||| |||||||| ||||||| ||||||||| |  ||| |  |||||||||||| ||||||||| |||||    
T  2288181 ataattacattgaattatgtgattttcttaaattattattgttgtcggtgtgttagtgtctatgtcgtgtccgatgt 2288257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 5898257 - 5898317
Alignment:
Q  155 tgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||| ||||| |||||||||||| | |||||||| ||||| ||| |||||||    
T  5898257 tgtcgtgtctgacaccgacgcatataattacactgaattatgtgattttttcagattatta 5898317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 10799712 - 10799680
Alignment:
Q  181 attacattaaattatgttattttctcaaattat 213  Q
    |||||||||||||||||||||||||||||||||    
T  10799712 attacattaaattatgttattttctcaaattat 10799680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 19637848 - 19637776
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||| || | ||||||| ||| ||||||||||| |||||||| ||| |||| ||||||| |||||||||    
T  19637848 gtgtcggatatgtatcgtgtccgacaccgacacatatgattacattgaataatgtcattttcttaaattatta 19637776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 215
Target Start/End: Original strand, 22881607 - 22881667
Alignment:
Q  155 tgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| ||| ||||||| | |||||||| |||||||||| ||||| |||||||||||    
T  22881607 tgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 22881667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 23636044 - 23636096
Alignment:
Q  159 gtgtctgactccgacacatataattacattaaattatgttattttctcaaatt 211  Q
    ||||||||| |||||||||| ||||||| | |||||||| |||||||||||||    
T  23636044 gtgtctgacaccgacacatacaattacactgaattatgtaattttctcaaatt 23636096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 40181935 - 40181879
Alignment:
Q  159 gtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||| ||| |||| ||||||||||||| | |||||||| |||||||||||||||||    
T  40181935 gtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattatta 40181879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 40747780 - 40747824
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||| |||||||||||| |||||||| |||||||||||||||||    
T  40747780 gacacctataattacattgaattatgtcattttctcaaattatta 40747824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 43609825 - 43609869
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||| | |||||||| ||||||||||||||||||||||||||    
T  43609825 gacacatgtgattacattcaattatgttattttctcaaattatta 43609869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 44482284 - 44482240
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattat 213  Q
    |||||||||||||||||| | |||||||| |||||||||||||||    
T  44482284 ccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 5376505 - 5376584
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    ||||||| | |||||||| | |||||||||||||||| |||||||||    ||| | |||||||||||| ||||||||||    
T  5376505 ccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtc 5376584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 17425101 - 17425144
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||    
T  17425101 acacatataattacattgaattatgtgattttatcaaattatta 17425144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 33230779 - 33230732
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    |||||||||||| |||||||||||||||| | ||| ||||||||||||    
T  33230779 ccgacacatatatttacattaaattatgtaaatttttcaaattattaa 33230732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 17080898 - 17080932
Alignment:
Q  181 attacattaaattatgttattttctcaaattatta 215  Q
    |||||||| ||||||||||||||||||||||||||    
T  17080898 attacattcaattatgttattttctcaaattatta 17080932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 18337416 - 18337338
Alignment:
Q  136 tgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatt 214  Q
    |||| ||||||||||||  ||| ||||| ||| ||||||| | |||||||| | |||||||| ||||| ||||||||||    
T  18337416 tgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 216
Target Start/End: Original strand, 22907317 - 22907391
Alignment:
Q  142 agtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    |||||||||||| ||| |||||  || ||||||| |||||||| |  ||||||| | ||||||||||||||||||    
T  22907317 agtgtcggacatgtgttgtgtcccacaccgacacttataattataccaaattatataattttctcaaattattaa 22907391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 213
Target Start/End: Complemental strand, 25361938 - 25361896
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattat 213  Q
    |||||||||||||||| | |||||||| |||||||||||||||    
T  25361938 gacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 212
Target Start/End: Original strand, 8842705 - 8842762
Alignment:
Q  155 tgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaatta 212  Q
    ||||||||| ||| || | |||||||||||||||||||||| |  |||||||||||||    
T  8842705 tgtcgtgtccgacaccaatacatataattacattaaattatatgtttttctcaaatta 8842762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 12713337 - 12713378
Alignment:
Q  174 acatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||| |||||||||| ||||||| |||||||||    
T  12713337 acatataattacactaaattatgtgattttcttaaattatta 12713378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 12717428 - 12717469
Alignment:
Q  174 acatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||| |||||||||| ||||||| |||||||||    
T  12717428 acatataattacactaaattatgtgattttcttaaattatta 12717469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 18190078 - 18190159
Alignment:
Q  134 tgtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| | ||||||||||  ||| |||||||||  |||||| | |||||||| | |||||||| ||||| |||||||||||    
T  18190078 tgtgtcccggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatgtaattttttcaaattatta 18190159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 24176373 - 24176418
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||| |||||||||| | ||| ||||||||||||||||||||||    
T  24176373 cgacacctataattacactgaatgatgttattttctcaaattatta 24176418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 25098563 - 25098604
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattat 213  Q
    ||||||||||||||| | |||||||| |||||||||||||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattat 25098604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 29163372 - 29163421
Alignment:
Q  155 tgtcgtgtctgactccgacacatataattacattaaattatgttattttc 204  Q
    ||||||||| ||| |||||||||||||||| ||| |||||||| ||||||    
T  29163372 tgtcgtgtccgacaccgacacatataattaaattgaattatgtgattttc 29163421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 1815337 - 1815277
Alignment:
Q  143 gtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttatttt 203  Q
    ||||||||||| ||||||||| ||| ||||||| | |||||||| | |||||||| |||||    
T  1815337 gtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgatttt 1815277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 10233305 - 10233261
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||| | |||||||| |||||||||| ||||||    
T  10233305 gacacatataattacactgaattatgtgattttctcaatttatta 10233261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 19324612 - 19324572
Alignment:
Q  173 cacatataattacattaaattatgttattttctcaaattat 213  Q
    |||||||||||||| | |||||||| |||||||||||||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 26238120 - 26238163
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||| ||||| | ||||||||||||||||||||||||||    
T  26238120 gacacatata-ttacactgaattatgttattttctcaaattatta 26238163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 26837753 - 26837793
Alignment:
Q  175 catataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||| |||||||| ||||||| |||||||||||    
T  26837753 catataattacactaaattatattattttttcaaattatta 26837793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 30847727 - 30847771
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| |||||||| |||||||| ||||| |||||||||||    
T  30847727 gacacatatgattacattgaattatgtcattttttcaaattatta 30847771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 32461478 - 32461514
Alignment:
Q  179 taattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  32461478 taattacattaaattatgtgattttttcaaattatta 32461514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 37055871 - 37055907
Alignment:
Q  179 taattacattaaattatgttattttctcaaattatta 215  Q
    |||||||| |||||||||| |||||||||||||||||    
T  37055871 taattacactaaattatgtaattttctcaaattatta 37055907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 39828323 - 39828279
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||| |||| |||| |||||| |||||||||||||||||||||||    
T  39828323 gacatatatgattagattaaagtatgttattttctcaaattatta 39828279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 46914052 - 46914084
Alignment:
Q  177 tataattacattaaattatgttattttctcaaa 209  Q
    |||||||||||| ||||||||||||||||||||    
T  46914052 tataattacattgaattatgttattttctcaaa 46914084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 1725 - 1651
Alignment:
Q  142 agtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaa 216  Q
    |||||||||||| ||||||||| ||| ||||||| |||||||| |  ||||||| | ||||||||||||||||||    
T  1725 agtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaa 1651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 240021 - 240072
Alignment:
Q  164 tgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||| ||||||||||| |||||||| |||||| |||||||||||||||||||    
T  240021 tgacaccgacacatatgattacattgaattatattattttctcaaattatta 240072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 26446 - 26373
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtc 243  Q
    ||||||||||||  ||||| |||||||| ||||||||||||||||| |  ||| ||||||| | ||||||||||    
T  26446 cgacacatataacgacattgaattatgtgattttctcaaattattagtggtgtcgacgtgtcactgtctgtgtc 26373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 248
Target Start/End: Complemental strand, 8886 - 8773
Alignment:
Q  135 gtgtctcagtgtcggacatatgtcgtgtctgactccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagt 234  Q
    ||||||| ||||||||||  ||||||||| ||| ||||||| | |||||||| ||||| || | ||||| |||||||||||    ||| | ||||| |||    
T  8886 gtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagt 8787  T
Q  235 gtctgtgtcgtgtc 248  Q
    ||| ||||||||||    
T  8786 gtccgtgtcgtgtc 8773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 135317 - 135393
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgt 245  Q
    ||||||||||||||||||   |||||||| |||||||||||||||||  | ||| |  ||||| |||||||||||||    
T  135317 ccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgttggtgtctgtgtcgt 135393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 236
Target Start/End: Complemental strand, 28904 - 28837
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgt 236  Q
    |||||||||||||||||||| |||||||  ||||||| ||||||||||   ||| | |||||||||||    
T  28904 ccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtcggcgtgttagtgt 28837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Complemental strand, 6366 - 6320
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||||||| |||||||  ||||| |||||||||||    
T  6366 ccgacacatataattacattgaattatgcaattttgtcaaattatta 6320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Original strand, 44530 - 44572
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaatt 211  Q
    |||||||||||||||||| | |||||||| |||||||||||||    
T  44530 ccgacacatataattacactgaattatgtgattttctcaaatt 44572  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 9752 - 9798
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    |||||||||||||||||| | ||||| || |||||||||||||||||    
T  9752 ccgacacatataattacactgaattaagtgattttctcaaattatta 9798  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 263379 - 263453
Alignment:
Q  171 gacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgt 245  Q
    ||||| |||||||||| | ||||||||  ||||||||||||||||  | ||||||| ||| |||||| |||||||    
T  263379 gacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgt 263453  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 225274 - 225352
Alignment:
Q  170 cgacacatataattacattaaattatgttattttctcaaattattaataatgttgacgtgttagtgtctgtgtcgtgtc 248  Q
    |||||| ||||||||||||  ||||||| |||||||||||||||||    ||| | ||||| |||||| ||||||||||    
T  225274 cgacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtc 225352  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 53234 - 53189
Alignment:
Q  169 ccgacacatataattacattaaattatgttattttctcaaattatt 214  Q
    ||||||| |||||||||| | |||||||| ||||||||||||||||    
T  53234 ccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

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Target: scaffold0320 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 17044 - 17088
Alignment:
Q  172 acacatataattacattaaattatgttattttctcaaattattaa 216  Q
    ||||||||||||||||| | |||||  ||||||||||||||||||    
T  17044 acacatataattacattgatttatgccattttctcaaattattaa 17088  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 63837 - 63781
Alignment:
Q  159 gtgtctgactccgacacatataattacattaaattatgttattttctcaaattatta 215  Q
    ||||||||| ||||||| | ||||| || | |||||||| |||||||||||||||||    
T  63837 gtgtctgacaccgacacttgtaattgcactgaattatgtaattttctcaaattatta 63781  T

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