View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10481A_low_369 (Length: 251)
Name: NF10481A_low_369
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10481A_low_369 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 4 - 239
Target Start/End: Original strand, 12943099 - 12943334
Alignment:
| Q |
4 |
gagtttggtgtttggtatagatgagttatgagaagtgaggaaataagtgtatgtttggttcggtggtagtaaaatttgattttgacgattgtatatctaa |
103 |
Q |
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| T |
12943099 |
gagtttgttgtttggtatagaagagttatgagaagtgaggaaataagtgtatgtttggttcggtggtagtaaaatttgattttgacgattgtatatctaa |
12943198 |
T |
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| Q |
104 |
aaataaataatttgttagtcgaaaacgatatacatacaaatttagggtcatgcgagttttcctcaaccaattgaaggttaggcaagtgaatattcaaccg |
203 |
Q |
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| T |
12943199 |
aaataaataatttgttagttgaaaacgacatacatacaaatttagggtcatgtgagttttcctcaaccaattgaaggttaggcaagtgtatattcaaccg |
12943298 |
T |
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| Q |
204 |
attgtgagttaggcgaatcattctcaactttattga |
239 |
Q |
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| T |
12943299 |
attgtgagttaggcgaatcattctcaactctattga |
12943334 |
T |
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