View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10481A_low_397 (Length: 250)

Name: NF10481A_low_397
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10481A_low_397
NF10481A_low_397
[»] chr7 (1 HSPs)
chr7 (52-121)||(32739192-32739261)


Alignment Details
Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 32739261 - 32739192
Alignment:
52 cagattcaaagatttagtttacctcaccaaagagaaaccataacaaacacagacaaatgtcaatattact 121  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
32739261 cagatccaaagatttagtttacctcaccaaagagaaaccataacaaacacagacaaatgtcaatattact 32739192  T

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