View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10481A_low_420 (Length: 247)
Name: NF10481A_low_420
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10481A_low_420 |
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Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 25 - 233
Target Start/End: Original strand, 2097888 - 2098096
Alignment:
| Q |
25 |
cgcctctcctcctatttattcaggtgtttgcatttcctcaatgatgataggatggtaaaactgttgtatcttttcaatcatgatttcgtacttttatact |
124 |
Q |
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| T |
2097888 |
cgcctctcctcctattttttcaggtgtttgcatttcctcaatgatgataggatggtaaaactgttgtatcttttcattcatgatttcgtacttttatact |
2097987 |
T |
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| Q |
125 |
agtacttctgtgtcgtcctccaattaaaaaacaaatactccattattagggtatctccaacccgtggtattacattaccaggaaagtcaccaacacggga |
224 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
2097988 |
agtacttctgtgtcgtcctccaattataaaacaaatactccattattagggtatctccaacccgtggtattacattacgaggaaagtcaccaacacggga |
2098087 |
T |
|
| Q |
225 |
acaccaaac |
233 |
Q |
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| T |
2098088 |
acaccaaac |
2098096 |
T |
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