View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10481A_low_433 (Length: 246)
Name: NF10481A_low_433
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10481A_low_433 |
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Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 17 - 230
Target Start/End: Complemental strand, 39360947 - 39360734
Alignment:
| Q |
17 |
catcatagtaaatctgataaaacttcatgtaatcctcgtatgccaacaattcatcagacaattcttgtacctcattttttgctaattcagcttcagcttg |
116 |
Q |
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| T |
39360947 |
catcatagtaaatctgataaaacttcatgtaatcctcgtatgccaacaattcatcagacaattcttgtacctcattttttgctaattcagcttcagcttg |
39360848 |
T |
|
| Q |
117 |
ttcaacaacatgtgtttcttgttctaccactttctctttctctttttcatgttcattcacaacaccaccaaaataaccgaattcattctcattggaacca |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
39360847 |
ttcaacaacatgtgtttcttgttctaccactttctctttctctttttcatgttcattcacaacaccaccaaaataaccgaattcattctgattggaacca |
39360748 |
T |
|
| Q |
217 |
ccattgaactccat |
230 |
Q |
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|||||||||||||| |
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| T |
39360747 |
ccattgaactccat |
39360734 |
T |
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