View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10481A_low_434 (Length: 246)

Name: NF10481A_low_434
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10481A_low_434
NF10481A_low_434
[»] chr6 (30 HSPs)
chr6 (100-239)||(5434100-5434239)
chr6 (103-239)||(5176804-5176940)
chr6 (95-237)||(5066566-5066708)
chr6 (86-239)||(5181790-5181943)
chr6 (103-239)||(5278631-5278767)
chr6 (86-239)||(5073771-5073924)
chr6 (95-232)||(5157500-5157637)
chr6 (100-232)||(5102491-5102623)
chr6 (101-239)||(5128295-5128433)
chr6 (103-239)||(5344926-5345062)
chr6 (86-237)||(5425977-5426128)
chr6 (103-221)||(5243793-5243911)
chr6 (100-237)||(5350461-5350592)
chr6 (101-239)||(5370636-5370774)
chr6 (95-232)||(5354486-5354623)
chr6 (103-239)||(5397015-5397151)
chr6 (103-232)||(5690039-5690168)
chr6 (88-239)||(5096773-5096924)
chr6 (159-238)||(5284325-5284404)
chr6 (100-239)||(5447652-5447791)
chr6 (15-70)||(5128395-5128450)
chr6 (15-74)||(5157606-5157665)
chr6 (15-70)||(5370619-5370674)
chr6 (15-74)||(5066672-5066731)
chr6 (15-70)||(5096756-5096811)
chr6 (15-74)||(5350438-5350497)
chr6 (9-74)||(5425954-5426019)
chr6 (17-74)||(5434079-5434136)
chr6 (156-239)||(5257267-5257350)
chr6 (117-232)||(5281372-5281487)
[»] chr7 (2 HSPs)
chr7 (101-239)||(36213707-36213845)
chr7 (156-221)||(18935469-18935534)
[»] chr5 (4 HSPs)
chr5 (100-239)||(8877674-8877813)
chr5 (15-74)||(8877653-8877712)
chr5 (105-218)||(20838718-20838831)
chr5 (143-199)||(15803016-15803072)
[»] chr4 (16 HSPs)
chr4 (93-239)||(4344711-4344857)
chr4 (95-239)||(4123811-4123955)
chr4 (93-211)||(4361170-4361288)
chr4 (106-239)||(4320502-4320635)
chr4 (150-218)||(4335431-4335499)
chr4 (100-211)||(6675796-6675907)
chr4 (100-237)||(6498403-6498540)
chr4 (107-237)||(6651134-6651264)
chr4 (100-210)||(6758818-6758928)
chr4 (171-237)||(6815537-6815603)
chr4 (156-221)||(7885324-7885389)
chr4 (15-74)||(4344690-4344749)
chr4 (138-237)||(6753027-6753126)
chr4 (138-224)||(6822771-6822857)
chr4 (100-237)||(6545325-6545462)
chr4 (177-237)||(4133379-4133439)
[»] scaffold0813 (1 HSPs)
scaffold0813 (107-237)||(4710-4840)
[»] chr8 (4 HSPs)
chr8 (103-204)||(3391536-3391637)
chr8 (104-218)||(3286516-3286630)
chr8 (146-204)||(3364269-3364327)
chr8 (177-209)||(3262700-3262732)
[»] chr2 (1 HSPs)
chr2 (134-201)||(14766978-14767045)
[»] scaffold0552 (1 HSPs)
scaffold0552 (171-237)||(8233-8299)


Alignment Details
Target: chr6 (Bit Score: 96; Significance: 3e-47; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 100 - 239
Target Start/End: Complemental strand, 5434239 - 5434100
Alignment:
Q  100 tatttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatct 199  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  5434239 tatttgttggtgacatccaagactgaatgataaatggaaataaatcgtgtgagaatccttcataaccgcacaaagagatatatccaatgctttttgatct 5434140  T
Q  200 tactactgaaaacggcactctttttattgcagtattattt 239  Q
     | ||||||||  |||||||||||||||||||| ||||||    
T  5434139 cagtactgaaagaggcactctttttattgcagtgttattt 5434100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 103 - 239
Target Start/End: Complemental strand, 5176940 - 5176804
Alignment:
Q  103 ttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatcttac 202  Q
    ||||||||||||| ||||||  ||||||   ||||||||||||| ||||||| |||||||| || ||||||||||| ||||||||||||||||| |||||    
T  5176940 ttgttggtgacatccaagaccaaatgattgatggaaatatatcacgtgagaatccttcatagccgcacaaagagatgtatccaatgctttttgaccttac 5176841  T
Q  203 tactgaaaacggcactctttttattgcagtattattt 239  Q
    || ||| || ||||||||| |||||||||| ||||||    
T  5176840 tattgacaagggcactcttgttattgcagtgttattt 5176804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 95 - 237
Target Start/End: Original strand, 5066566 - 5066708
Alignment:
Q  95 gagactatttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgcttttt 194  Q
    |||| |||||||||||||||| ||||||  |||||||  |||||| | |||| | ||||| |||||||| || ||||||||||| |||||||||||||||    
T  5066566 gagattatttgttggtgacatccaagacaaaatgatagatggaaacacatcacgcgagaatccttcatagccgcacaaagagatgtatccaatgcttttt 5066665  T
Q  195 gatcttactactgaaaacggcactctttttattgcagtattat 237  Q
    || |||||||||||||| || | ||||||||||||||| ||||    
T  5066666 gaccttactactgaaaagggtattctttttattgcagttttat 5066708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 86 - 239
Target Start/End: Original strand, 5181790 - 5181943
Alignment:
Q  86 tggggaagagagactatttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatcca 185  Q
    |||||| | |||| ||||||| |||||||| ||||||  ||||||   |||||| | |||||||||||| |||||||| |||||||| || |||||| ||    
T  5181790 tggggatgggagattatttgtcggtgacatccaagaccaaatgatcgctggaaacacatcatgtgagaatccttcatatccacacaaggaaatatatgca 5181889  T
Q  186 atgctttttgatcttactactgaaaacggcactctttttattgcagtattattt 239  Q
    |||||||| ||  ||||||||||||||||||||||| |||||||||| ||||||    
T  5181890 atgcttttggactttactactgaaaacggcactcttgttattgcagtgttattt 5181943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 103 - 239
Target Start/End: Complemental strand, 5278767 - 5278631
Alignment:
Q  103 ttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatcttac 202  Q
    ||||||||||||| ||||||  ||||||   ||||||||||||| ||||||| |||||||| || ||||||||||| ||||||||||||||||| |||||    
T  5278767 ttgttggtgacatccaagaccaaatgattgatggaaatatatcacgtgagaatccttcatagccgcacaaagagatgtatccaatgctttttgaccttac 5278668  T
Q  203 tactgaaaacggcactctttttattgcagtattattt 239  Q
    ||  || || ||||||||| |||||||||| ||||||    
T  5278667 tatagacaagggcactcttgttattgcagtgttattt 5278631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 86 - 239
Target Start/End: Original strand, 5073771 - 5073924
Alignment:
Q  86 tggggaagagagactatttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatcca 185  Q
    |||||||| |||| ||||||| |||||||| ||||||  ||||||   ||| || | |||| ||||||| |||||||| || |||||||| |||||||||    
T  5073771 tggggaagtgagattatttgtcggtgacatccaagaccaaatgatcgatgggaacacatcacgtgagaatccttcatagccgcacaaagaaatatatcca 5073870  T
Q  186 atgctttttgatcttactactgaaaacggcactctttttattgcagtattattt 239  Q
    |||||||| || |||||||||||||| ||||||||| ||||||| || ||||||    
T  5073871 atgcttttcgaccttactactgaaaagggcactcttgttattgcggtgttattt 5073924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 95 - 232
Target Start/End: Original strand, 5157500 - 5157637
Alignment:
Q  95 gagactatttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgcttttt 194  Q
    |||| |||||||||||||||| ||||||  |||||||  |||||| | |||| | || || |||||||| || | ||||||||| |||||||||||||||    
T  5157500 gagattatttgttggtgacatccaagaccaaatgatagatggaaacacatcacgagaaaatccttcatagccgcccaaagagatgtatccaatgcttttt 5157599  T
Q  195 gatcttactactgaaaacggcactctttttattgcagt 232  Q
    || |||||||||||||| || |||||||||||||||||    
T  5157600 gaccttactactgaaaagggtactctttttattgcagt 5157637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 100 - 232
Target Start/End: Original strand, 5102491 - 5102623
Alignment:
Q  100 tatttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatct 199  Q
    |||||||||||||||| ||||||   ||||||  |||||| | ||||||||| |  |||||||| ||||| | |||||||||||||||||||||||| ||    
T  5102491 tatttgttggtgacatccaagaccagatgatagatggaaacacatcatgtgaaagtccttcatagccacatagagagatatatccaatgctttttgacct 5102590  T
Q  200 tactactgaaaacggcactctttttattgcagt 232  Q
    |||||||||||| |||||| || ||||||||||    
T  5102591 tactactgaaaagggcactgttgttattgcagt 5102623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 101 - 239
Target Start/End: Original strand, 5128295 - 5128433
Alignment:
Q  101 atttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatctt 200  Q
    ||||||||||||||| ||||||   ||||||  |||||| | ||||  ||| || |||||||  || |||| |||||||||||||||||||||||| |||    
T  5128295 atttgttggtgacatccaagaccagatgatagatggaaacacatcacttgaaaatccttcatggccgcacagagagatatatccaatgctttttgacctt 5128394  T
Q  201 actactgaaaacggcactctttttattgcagtattattt 239  Q
    ||||||||||| || ||||||||||||||||| ||||||    
T  5128395 actactgaaaagggtactctttttattgcagtgttattt 5128433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 103 - 239
Target Start/End: Complemental strand, 5345062 - 5344926
Alignment:
Q  103 ttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatcttac 202  Q
    ||||||||||||| ||||||   ||||||  |||||||| |||  ||||||| |||||||| ||||||| ||| |||||||||||||||||||| |||||    
T  5345062 ttgttggtgacatccaagaccagatgatagatggaaatacatcgcgtgagaatccttcatagccacacagagaaatatatccaatgctttttgaccttac 5344963  T
Q  203 tactgaaaacggcactctttttattgcagtattattt 239  Q
    |||| |||| || ||| || |||||||||| ||||||    
T  5344962 tactaaaaagggaacttttgttattgcagtgttattt 5344926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 237
Target Start/End: Complemental strand, 5426128 - 5425977
Alignment:
Q  86 tggggaagagagactatttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatcca 185  Q
    |||||| | |||| |||||||||||||||| ||||||  ||||||   |||||| | |||| |||| || |||||||| || ||||||||||| ||||||    
T  5426128 tggggatgggagattatttgttggtgacatccaagaccaaatgatcgctggaaacacatcacgtgaaaatccttcatagccgcacaaagagatgtatcca 5426029  T
Q  186 atgctttttgatcttactactgaaaacggcactctttttattgcagtattat 237  Q
    ||||||| |||  |||| |||||||| || ||||||||||||||||| ||||    
T  5426028 atgctttgtgacattaccactgaaaagggtactctttttattgcagttttat 5425977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 221
Target Start/End: Original strand, 5243793 - 5243911
Alignment:
Q  103 ttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatcttac 202  Q
    ||||||||||||| ||||||   ||||||  |||||||| |||  |||| || |||||||| ||||||||||| |||||||| ||||||||||| |||||    
T  5243793 ttgttggtgacatccaagaccagatgatagatggaaatacatcgcgtgaaaatccttcatagccacacaaagaaatatatccgatgctttttgaccttac 5243892  T
Q  203 tactgaaaacggcactctt 221  Q
    ||||||||| |||||||||    
T  5243893 tactgaaaagggcactctt 5243911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 237
Target Start/End: Complemental strand, 5350592 - 5350461
Alignment:
Q  100 tatttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatct 199  Q
    |||||||||||||||| ||||| ||||||||||      | | |||| |||| || |||||||| || ||||||||||| ||||||||||||||||| ||    
T  5350592 tatttgttggtgacatccaagaatgaatgataa------acacatcacgtgaaaatccttcatagccgcacaaagagatgtatccaatgctttttgacct 5350499  T
Q  200 tactactgaaaacggcactctttttattgcagtattat 237  Q
    |||||||||||| || | ||||||||||||||| ||||    
T  5350498 tactactgaaaagggtattctttttattgcagttttat 5350461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 101 - 239
Target Start/End: Complemental strand, 5370774 - 5370636
Alignment:
Q  101 atttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatctt 200  Q
    ||||||||||||||| ||||||  |||||||  |||||| | ||||||||| || ||| |||  |||||||| || || ||||||||||||||||| | |    
T  5370774 atttgttggtgacatccaagaccaaatgatagatggaaaaacatcatgtgaaaatcctacatggccacacaatgaaatgtatccaatgctttttgaccgt 5370675  T
Q  201 actactgaaaacggcactctttttattgcagtattattt 239  Q
    ||||||||||| || || |||||||||||||| ||||||    
T  5370674 actactgaaaagggtaccctttttattgcagtgttattt 5370636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 232
Target Start/End: Original strand, 5354486 - 5354623
Alignment:
Q  95 gagactatttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgcttttt 194  Q
    |||| |||||||||||||||| ||||||  |||||||  |||||| | |||| ||||||| |||||||| ||||| ||||| |||||||||||||||||     
T  5354486 gagattatttgttggtgacatccaagaccaaatgatagatggaaacacatcacgtgagaatccttcatagccacataaagaaatatatccaatgcttttg 5354585  T
Q  195 gatcttactactgaaaacggcactctttttattgcagt 232  Q
    || || |||| ||| || || |||||| ||||||||||    
T  5354586 gaactaactattgagaagggtactcttgttattgcagt 5354623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 239
Target Start/End: Complemental strand, 5397151 - 5397015
Alignment:
Q  103 ttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatcttac 202  Q
    ||||||||||||| ||||||  |||||||  |||||| |  |||  ||| || |||||||| || |||||||||||| |||||||||||||| | ||||     
T  5397151 ttgttggtgacatccaagacgaaatgatagctggaaacacttcacatgaaaatccttcatatccgcacaaagagataaatccaatgctttttaaccttaa 5397052  T
Q  203 tactgaaaacggcactctttttattgcagtattattt 239  Q
     | ||||||||||||||||||||||||||| ||||||    
T  5397051 aattgaaaacggcactctttttattgcagtgttattt 5397015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 232
Target Start/End: Original strand, 5690039 - 5690168
Alignment:
Q  103 ttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatcttac 202  Q
    ||||||||||||| ||||||  |||||||  ||||||||||||| ||||||| |||||||  || |||| ||| ||||| |||||||||||||| |||||    
T  5690039 ttgttggtgacatccaagaccaaatgatagatggaaatatatcacgtgagaatccttcatgtccgcacagagaaatatacccaatgctttttgaccttac 5690138  T
Q  203 tactgaaaacggcactctttttattgcagt 232  Q
     | |||||| ||||| ||| ||||| ||||    
T  5690139 aattgaaaagggcacacttgttattccagt 5690168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 5096924 - 5096773
Alignment:
Q  88 gggaagagagactatttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaat 187  Q
    |||| |||||| |||||||||||||||  ||||||   ||||||   ||||| | |||| |||| || |||||||  ||||| | ||| || ||||||||    
T  5096924 gggatgagagattatttgttggtgacaaccaagaccagatgatagacggaaacacatcacgtgaaaatccttcatggccacatagagaaatgtatccaat 5096825  T
Q  188 gctttttgatcttactactgaaaacggcactctttttattgcagtattattt 239  Q
    ||||||||| |||||||||||||| || |||||||||||| |||| ||||||    
T  5096824 gctttttgaccttactactgaaaagggtactctttttattccagtgttattt 5096773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 5284325 - 5284404
Alignment:
Q  159 tcataaccacacaaagagatatatccaatgctttttgatcttactactgaaaacggcactctttttattgcagtattatt 238  Q
    |||||||| |||||||  ||||||||||||||||| || |||||||||||||| ||||||||| ||||||| || |||||    
T  5284325 tcataaccgcacaaagcaatatatccaatgcttttcgaccttactactgaaaagggcactcttgttattgcggtgttatt 5284404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 239
Target Start/End: Complemental strand, 5447791 - 5447652
Alignment:
Q  100 tatttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatct 199  Q
    ||||| |||||||||| |||||| |||| |||  |||||| | |||||| ||| | |||||| | || |||||||| |||||||||||||| || || ||    
T  5447791 tatttcttggtgacatccaagaccgaataatagatggaaacacatcatgcgaggatccttcaaatccgcacaaagaaatatatccaatgctcttcgacct 5447692  T
Q  200 tactactgaaaacggcactctttttattgcagtattattt 239  Q
     ||||| ||||| |||||| || |||||| ||||||||||    
T  5447691 aactaccgaaaagggcactgttgttattgaagtattattt 5447652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 5128395 - 5128450
Alignment:
Q  15 actactgaaaagggtactctgtttattgcagtgttctttgcaagctgagtggttaa 70  Q
    |||||||||||||||||||| |||||||||||||| ||||||||| |||| |||||    
T  5128395 actactgaaaagggtactctttttattgcagtgttatttgcaagcagagttgttaa 5128450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 5157606 - 5157665
Alignment:
Q  15 actactgaaaagggtactctgtttattgcagtgttctttgcaagctgagtggttaaagat 74  Q
    |||||||||||||||||||| |||||||||||||  | ||||||| ||||||||||||||    
T  5157606 actactgaaaagggtactctttttattgcagtgtcgtgtgcaagcagagtggttaaagat 5157665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 5370674 - 5370619
Alignment:
Q  15 actactgaaaagggtactctgtttattgcagtgttctttgcaagctgagtggttaa 70  Q
    ||||||||||||||||| || |||||||||||||| ||||||||| ||||||||||    
T  5370674 actactgaaaagggtaccctttttattgcagtgttatttgcaagcagagtggttaa 5370619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 5066672 - 5066731
Alignment:
Q  15 actactgaaaagggtactctgtttattgcagtgttctttgcaagctgagtggttaaagat 74  Q
    |||||||||||||||| ||| ||||||||||| || | ||||||| ||||||||||||||    
T  5066672 actactgaaaagggtattctttttattgcagttttatgtgcaagcagagtggttaaagat 5066731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 5096811 - 5096756
Alignment:
Q  15 actactgaaaagggtactctgtttattgcagtgttctttgcaagctgagtggttaa 70  Q
    |||||||||||||||||||| |||||| ||||||| ||||||||| || |||||||    
T  5096811 actactgaaaagggtactctttttattccagtgttatttgcaagcagaatggttaa 5096756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 5350497 - 5350438
Alignment:
Q  15 actactgaaaagggtactctgtttattgcagtgttctttgcaagctgagtggttaaagat 74  Q
    |||||||||||||||| ||| ||||||||||| || | ||||||| ||||||||||||||    
T  5350497 actactgaaaagggtattctttttattgcagttttatgtgcaagcagagtggttaaagat 5350438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 5426019 - 5425954
Alignment:
Q  9 gacatcactactgaaaagggtactctgtttattgcagtgttctttgcaagctgagtggttaaagat 74  Q
    ||||| || ||||||||||||||||| ||||||||||| || | ||||| | ||||||||||||||    
T  5426019 gacattaccactgaaaagggtactctttttattgcagttttatgtgcaatcagagtggttaaagat 5425954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 5434136 - 5434079
Alignment:
Q  17 tactgaaaagggtactctgtttattgcagtgttctttgcaagctgagtggttaaagat 74  Q
    ||||||||  || ||||| |||||||||||||| ||||||||| ||||||||||||||    
T  5434136 tactgaaagaggcactctttttattgcagtgttatttgcaagcagagtggttaaagat 5434079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 239
Target Start/End: Original strand, 5257267 - 5257350
Alignment:
Q  156 ccttcataaccacacaaagagatatatccaatgctttttgatcttactactgaaaacggcactctttttattgcagtattattt 239  Q
    |||||||||||   |||||||| | || | ||||||||||||||||  ||||| || ||||||||| |||||||||| ||||||    
T  5257267 ccttcataaccgtgcaaagagacaaattcgatgctttttgatcttaaaactgataatggcactcttgttattgcagtgttattt 5257350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 232
Target Start/End: Complemental strand, 5281487 - 5281372
Alignment:
Q  117 caagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatcttactactgaaaacggca 216  Q
    |||||| ||||||||  ||||| || |||| ||||||| |||| ||| || || ||||| |||||||||||| ||||  | ||| |||||| ||| || |    
T  5281487 caagaccgaatgatatatggaactacatcacgtgagaatcctttatagccgcagaaagaaatatatccaatgtttttcaaccttcctactgcaaagggaa 5281388  T
Q  217 ctctttttattgcagt 232  Q
    ||||| ||||||||||    
T  5281387 ctcttgttattgcagt 5281372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 101 - 239
Target Start/End: Original strand, 36213707 - 36213845
Alignment:
Q  101 atttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatctt 200  Q
    ||||||||||||||| ||||||  |||||||  |||||| | |||||||||||| |||||||| || |||||||| |||||  | |||||||| ||||||    
T  36213707 atttgttggtgacatccaagaccaaatgatagatggaaacacatcatgtgagaatccttcatagccgcacaaagatatataagcgatgcttttagatctt 36213806  T
Q  201 actactgaaaacggcactctttttattgcagtattattt 239  Q
    ||||||||||| ||||||||| |||||||||| ||||||    
T  36213807 actactgaaaatggcactcttgttattgcagtgttattt 36213845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 18935534 - 18935469
Alignment:
Q  156 ccttcataaccacacaaagagatatatccaatgctttttgatcttactactgaaaacggcactctt 221  Q
    |||||| | |||||||  || ||| ||||||||||||||||||||||||||| ||| |||||||||    
T  18935534 ccttcaaatccacacagtgaaataaatccaatgctttttgatcttactactgcaaagggcactctt 18935469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 100 - 239
Target Start/End: Complemental strand, 8877813 - 8877674
Alignment:
Q  100 tatttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatct 199  Q
    |||||||||||||||| ||||||  |||||||  |||||| | |||| | || || |||||||| || |||||||| |||||||||||||||||||| ||    
T  8877813 tatttgttggtgacatccaagaccaaatgatagatggaaacacatcacgcgaaaatccttcatagccgcacaaagaaatatatccaatgctttttgacct 8877714  T
Q  200 tactactgaaaacggcactctttttattgcagtattattt 239  Q
    ||||| |||||| || ||||||||||||||||| ||||||    
T  8877713 tactaatgaaaatggtactctttttattgcagtgttattt 8877674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 8877712 - 8877653
Alignment:
Q  15 actactgaaaagggtactctgtttattgcagtgttctttgcaagctgagtggttaaagat 74  Q
    |||| |||||| |||||||| |||||||||||||| ||||||||| ||||||||||||||    
T  8877712 actaatgaaaatggtactctttttattgcagtgttatttgcaagcagagtggttaaagat 8877653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 20838831 - 20838718
Alignment:
Q  105 gttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatcttacta 204  Q
    ||||||||||| ||||||  ||||| |   ||||| | ||||||||| || |||||||| ||||| |  || |||||||||||||||||||||||| |||    
T  20838831 gttggtgacatccaagaccaaatgagagaaggaaaaacatcatgtgataatccttcatatccacatagtgatatatatccaatgctttttgatcttgcta 20838732  T
Q  205 ctgaaaacggcact 218  Q
     |||| | ||||||    
T  20838731 ttgaatagggcact 20838718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 15803072 - 15803016
Alignment:
Q  143 atcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatct 199  Q
    ||||||||| || |||| ||| ||||| | ||| |||||||||||||||||||||||    
T  15803072 atcatgtgataatcctttatatccacatagagatatatatccaatgctttttgatct 15803016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 93 - 239
Target Start/End: Complemental strand, 4344857 - 4344711
Alignment:
Q  93 gagagactatttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgcttt 192  Q
    ||||||| ||||||||||||||| ||||||  |||||||   ||||| | |||| ||||||| |||||||| ||||||||||| ||| ||||||||| ||    
T  4344857 gagagaccatttgttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgtt 4344758  T
Q  193 ttgatcttactactgaaaacggcactctttttattgcagtattattt 239  Q
    |||| |||||||||||||| || ||| || |||| ||||| ||||||    
T  4344757 ttgaccttactactgaaaagggtacttttgttatagcagtgttattt 4344711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 239
Target Start/End: Original strand, 4123811 - 4123955
Alignment:
Q  95 gagactatttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgcttttt 194  Q
    |||| ||||||||||| |||| ||||||  |||||||   ||||| | |||| | ||||| |||||||| ||||||| ||| ||| ||||||||||||||    
T  4123811 gagattatttgttggtaacatccaagacgaaatgatagaaggaaacacatcacgagagaatccttcatatccacacagagaaataaatccaatgcttttt 4123910  T
Q  195 gatcttactactgaaaacggcactctttttattgcagtattattt 239  Q
    || |||||||| ||||| |||||| || |||| ||||||||||||    
T  4123911 gaccttactaccgaaaagggcacttttgttatagcagtattattt 4123955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 211
Target Start/End: Complemental strand, 4361288 - 4361170
Alignment:
Q  93 gagagactatttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgcttt 192  Q
    ||||||| ||||||||||||||| ||||||  |||||||   ||||| | |||| ||||||| |||||||| ||||||||||| ||| ||||||||| ||    
T  4361288 gagagaccatttgttggtgacatccaagacgaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacaaagaaataaatccaatgcgtt 4361189  T
Q  193 ttgatcttactactgaaaa 211  Q
    |||||||||| | ||||||    
T  4361188 ttgatcttacaattgaaaa 4361170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 239
Target Start/End: Original strand, 4320502 - 4320635
Alignment:
Q  106 ttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatcttactac 205  Q
    |||||||||| ||||||  |||||||   ||||| | |||| ||||||| |||||||| ||||||| ||| ||| |||||||||||||||| |||||||     
T  4320502 ttggtgacatccaagaccaaatgatagaaggaaacacatcacgtgagaatccttcatatccacacagagaaataaatccaatgctttttgaccttactaa 4320601  T
Q  206 tgaaaacggcactctttttattgcagtattattt 239  Q
    |||||| || ||| || ||||  |||||||||||    
T  4320602 tgaaaagggaacttttgttataccagtattattt 4320635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 150 - 218
Target Start/End: Complemental strand, 4335499 - 4335431
Alignment:
Q  150 gagaacccttcataaccacacaaagagatatatccaatgctttttgatcttactactgaaaacggcact 218  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||||||  ||||||||||||| ||||||    
T  4335499 gagaatccttcatacccacacaaagagatatagccaatgctttttgactttactactgaaaagggcact 4335431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 211
Target Start/End: Complemental strand, 6675907 - 6675796
Alignment:
Q  100 tatttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatct 199  Q
    |||||| ||||||||| ||||||| ||||| |   ||||||| |||| |||| || |||||| | ||||| ||||||||  |||||||||| ||||||||    
T  6675907 tatttgatggtgacatccaagacttaatgagagaaggaaatacatcaagtgaaaatccttcaaagccacataaagagatgaatccaatgctctttgatct 6675808  T
Q  200 tactactgaaaa 211  Q
    ||||| ||||||    
T  6675807 tactattgaaaa 6675796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 6498403 - 6498540
Alignment:
Q  100 tatttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatct 199  Q
    |||||| ||||||||| |||||| |||||| |   ||||||| |||| |||| || |||| | | ||||  ||||| || ||||||||||||||||||||    
T  6498403 tatttgatggtgacatccaagaccgaatgagagaaggaaatacatcacgtgaaaatcctttaaatccacctaaagaaatgtatccaatgctttttgatct 6498502  T
Q  200 tactactgaaaacggcactctttttattgcagtattat 237  Q
    ||||| |||||| || ||| || |||| ||||| ||||    
T  6498503 tactattgaaaagggaacttttgttatagcagtcttat 6498540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 237
Target Start/End: Complemental strand, 6651264 - 6651134
Alignment:
Q  107 tggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatcttactact 206  Q
    ||||||||| |||||| ||| || ||  ||||||| |||  |||| || |||||| | ||||| | ||| |||||||||||| || || ||||||||| |    
T  6651264 tggtgacatccaagaccgaacgagaaaaggaaatacatctcgtgaaaatccttcaaagccacatagagaaatatatccaatgtttcttaatcttactatt 6651165  T
Q  207 gaaaacggcactctttttattgcagtattat 237  Q
    |||||||||||| || |||| ||||| ||||    
T  6651164 gaaaacggcacttttgttatagcagtcttat 6651134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 210
Target Start/End: Complemental strand, 6758928 - 6758818
Alignment:
Q  100 tatttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatct 199  Q
    |||||||||||||||| | |||| |||||| ||  |||||||||||| |||  || |||||| | ||||||| ||| ||| ||| |||||||||| ||||    
T  6758928 tatttgttggtgacatcctagaccgaatgacaaaaggaaatatatcacgtgcaaatccttcaaagccacacagagaaataaatctaatgctttttaatct 6758829  T
Q  200 tactactgaaa 210  Q
    || || |||||    
T  6758828 taatattgaaa 6758818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 6815603 - 6815537
Alignment:
Q  171 aaagagatatatccaatgctttttgatcttactactgaaaacggcactctttttattgcagtattat 237  Q
    ||||| |||||||||||||||||  ||||||| |||||||| |||||| ||||||| ||||| ||||    
T  6815603 aaagaaatatatccaatgcttttcaatcttaccactgaaaatggcactttttttatagcagtcttat 6815537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 7885324 - 7885389
Alignment:
Q  156 ccttcataaccacacaaagagatatatccaatgctttttgatcttactactgaaaacggcactctt 221  Q
    |||| ||||||||| | ||| ||| || |||||||||||||||||||||||| ||| |||||||||    
T  7885324 cctttataaccacatagagaaataaatgcaatgctttttgatcttactactgcaaagggcactctt 7885389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 4344749 - 4344690
Alignment:
Q  15 actactgaaaagggtactctgtttattgcagtgttctttgcaagctgagtggttaaagat 74  Q
    |||||||||||||||||| |  |||| |||||||| ||||||| | ||||||||||||||    
T  4344749 actactgaaaagggtacttttgttatagcagtgttatttgcaatcagagtggttaaagat 4344690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 6753126 - 6753027
Alignment:
Q  138 aatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatcttactactgaaaacggcactctttttattgcagtattat 237  Q
    |||| |||| |||| || |||||| | ||||  ||||| |||||||||||||||||  ||||||||| |||||| |||||| || |||| ||||| ||||    
T  6753126 aatacatcacgtgaaaatccttcaaagccacgaaaagaaatatatccaatgcttttcaatcttactattgaaaagggcacttttgttatagcagtcttat 6753027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 6822857 - 6822771
Alignment:
Q  138 aatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatcttactactgaaaacggcactcttttt 224  Q
    |||| |||| |||| || |||||| | || || ||||| |||||||||||||||||  ||||||||| |||||| |||||| |||||    
T  6822857 aatacatcacgtgaaaatccttcaaagccgcataaagaaatatatccaatgcttttcaatcttactattgaaaatggcacttttttt 6822771  T

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Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 237
Target Start/End: Original strand, 6545325 - 6545462
Alignment:
Q  100 tatttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatct 199  Q
    |||||| ||||||||  |||||| |||||| |   || |||| |||| |||| || |||||| | ||||  ||||| |||||||||||||||||  ||||    
T  6545325 tatttgatggtgacagccaagaccgaatgagagaagggaatacatcacgtgaaaatccttcaaagccacgaaaagaaatatatccaatgcttttcaatct 6545424  T
Q  200 tactactgaaaacggcactctttttattgcagtattat 237  Q
     |||| |||||| |||||| || |||| ||||| ||||    
T  6545425 aactattgaaaagggcacttttgttatagcagtcttat 6545462  T

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Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 4133379 - 4133439
Alignment:
Q  177 atatatccaatgctttttgatcttactactgaaaacggcactctttttattgcagtattat 237  Q
    |||||| ||||||||||||| ||| | |||||||| |||||| || |||||||||| ||||    
T  4133379 atatattcaatgctttttgaccttgcgactgaaaagggcacttttgttattgcagtgttat 4133439  T

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Target: scaffold0813 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0813
Description:

Target: scaffold0813; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 237
Target Start/End: Original strand, 4710 - 4840
Alignment:
Q  107 tggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatcttactact 206  Q
    ||||||||| |||||| ||| || ||  ||||||| |||  |||| || |||||| | ||||| | ||| |||||||||||| || || ||||||||| |    
T  4710 tggtgacatccaagaccgaacgagaaaaggaaatacatctcgtgaaaatccttcaaagccacatagagaaatatatccaatgtttcttaatcttactatt 4809  T
Q  207 gaaaacggcactctttttattgcagtattat 237  Q
    |||||||||||| || |||| ||||| ||||    
T  4810 gaaaacggcacttttgttatagcagtcttat 4840  T

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Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 204
Target Start/End: Original strand, 3391536 - 3391637
Alignment:
Q  103 ttgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatcttac 202  Q
    ||||||||||||| ||||||  ||||| |   ||||| | || |||||| || |||||||| ||||| | ||| ||||||||||||||||||||||| ||    
T  3391536 ttgttggtgacatccaagacctaatgagagaaggaaaaacatgatgtgataatccttcatatccacatagagatatatatccaatgctttttgatctcac 3391635  T
Q  203 ta 204  Q
    ||    
T  3391636 ta 3391637  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 218
Target Start/End: Original strand, 3286516 - 3286630
Alignment:
Q  104 tgttggtgacatacaagactgaatgataagtggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatcttact 203  Q
    |||||||||||| ||||||  ||||| |  | |||| | ||||||||| || |||||||| ||||| |  || |||||||  |||||||||||||||||     
T  3286516 tgttggtgacatccaagacctaatgagagattgaaaaacatcatgtgataatccttcatatccacatagggatatatatctgatgctttttgatcttaca 3286615  T
Q  204 actgaaaacggcact 218  Q
    | |||||| ||||||    
T  3286616 attgaaaagggcact 3286630  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 3364327 - 3364269
Alignment:
Q  146 atgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatcttacta 204  Q
    |||||| || |||||||| ||||| | ||| ||||||||||||||||||||||| ||||    
T  3364327 atgtgataatccttcatatccacatagagatatatatccaatgctttttgatctcacta 3364269  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 3262700 - 3262732
Alignment:
Q  177 atatatccaatgctttttgatcttactactgaa 209  Q
    |||||||||||||||||||||||||||| ||||    
T  3262700 atatatccaatgctttttgatcttactattgaa 3262732  T

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Target: chr2 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 14766978 - 14767045
Alignment:
Q  134 tggaaatatatcatgtgagaacccttcataaccacacaaagagatatatccaatgctttttgatctta 201  Q
    |||||| |||||||| || || |||||||||||||| |  || |||||||||||||||||| ||||||    
T  14766978 tggaaaaatatcatgcgataatccttcataaccacatagggatatatatccaatgctttttaatctta 14767045  T

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Target: scaffold0552 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0552
Description:

Target: scaffold0552; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 8233 - 8299
Alignment:
Q  171 aaagagatatatccaatgctttttgatcttactactgaaaacggcactctttttattgcagtattat 237  Q
    ||||| |||||||||||| ||||  ||||||| |||||||| |||||| ||||||| ||||| ||||    
T  8233 aaagaaatatatccaatggttttcaatcttaccactgaaaatggcactttttttatagcagtcttat 8299  T

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