View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10481A_low_453 (Length: 244)

Name: NF10481A_low_453
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10481A_low_453
NF10481A_low_453
[»] chr1 (34 HSPs)
chr1 (32-244)||(23378472-23378683)
chr1 (33-204)||(23591698-23591867)
chr1 (33-204)||(1502729-1502897)
chr1 (33-204)||(38812740-38812909)
chr1 (33-204)||(13321876-13322045)
chr1 (33-204)||(30171879-30172048)
chr1 (33-204)||(30187420-30187589)
chr1 (33-204)||(23576423-23576591)
chr1 (35-204)||(6754474-6754640)
chr1 (49-197)||(36490795-36490941)
chr1 (35-204)||(41624832-41624998)
chr1 (33-204)||(6180186-6180355)
chr1 (33-204)||(39150336-39150504)
chr1 (33-181)||(39627603-39627749)
chr1 (33-204)||(35512725-35512894)
chr1 (44-188)||(47355403-47355544)
chr1 (33-199)||(7824872-7825036)
chr1 (33-204)||(22167335-22167504)
chr1 (44-188)||(7520022-7520164)
chr1 (87-204)||(52337821-52337935)
chr1 (33-204)||(17919454-17919622)
chr1 (34-122)||(5857990-5858079)
chr1 (30-103)||(29924356-29924429)
chr1 (153-204)||(25465276-25465327)
chr1 (33-145)||(34050351-34050461)
chr1 (33-99)||(44918025-44918091)
chr1 (33-144)||(3121119-3121227)
chr1 (34-99)||(8062206-8062271)
chr1 (95-150)||(33048175-33048227)
chr1 (65-122)||(35941110-35941167)
chr1 (41-118)||(43317498-43317575)
chr1 (45-142)||(50079870-50079966)
chr1 (33-98)||(51382372-51382437)
chr1 (49-150)||(25956665-25956764)
[»] chr4 (41 HSPs)
chr4 (33-196)||(2096871-2097032)
chr4 (33-204)||(24684836-24685006)
chr4 (33-204)||(9759151-9759319)
chr4 (33-202)||(19468194-19468361)
chr4 (35-202)||(19450911-19451076)
chr4 (33-204)||(16667393-16667562)
chr4 (33-197)||(50352303-50352464)
chr4 (33-204)||(17409824-17409993)
chr4 (35-204)||(49181074-49181241)
chr4 (33-141)||(7349689-7349794)
chr4 (47-117)||(10813587-10813658)
chr4 (33-202)||(40049559-40049725)
chr4 (33-196)||(8736828-8736988)
chr4 (33-204)||(23545476-23545645)
chr4 (33-204)||(27019260-27019429)
chr4 (33-204)||(34941278-34941447)
chr4 (70-196)||(37784877-37785001)
chr4 (33-142)||(6875501-6875608)
chr4 (33-149)||(25843291-25843406)
chr4 (48-204)||(27362406-27362560)
chr4 (33-196)||(52391298-52391459)
chr4 (33-204)||(54495646-54495815)
chr4 (33-98)||(10389380-10389445)
chr4 (34-148)||(33632267-33632379)
chr4 (44-101)||(40681960-40682017)
chr4 (33-98)||(49228357-49228422)
chr4 (89-195)||(1378075-1378178)
chr4 (34-148)||(19838756-19838866)
chr4 (46-196)||(39876844-39876991)
chr4 (33-96)||(45742368-45742431)
chr4 (89-197)||(55813920-55814026)
chr4 (57-148)||(13009820-13009909)
chr4 (33-204)||(47326901-47327070)
chr4 (33-204)||(47341697-47341866)
chr4 (33-122)||(49332333-49332423)
chr4 (33-110)||(10658544-10658621)
chr4 (33-110)||(10872689-10872766)
chr4 (34-196)||(51691343-51691502)
chr4 (33-100)||(3728249-3728317)
chr4 (128-204)||(18882276-18882352)
chr4 (86-143)||(35645071-35645126)
[»] chr7 (25 HSPs)
chr7 (33-143)||(42750289-42750396)
chr7 (34-204)||(47457470-47457638)
chr7 (32-204)||(26300572-26300740)
chr7 (33-204)||(24462964-24463132)
chr7 (33-204)||(33342989-33343157)
chr7 (35-204)||(7170005-7170171)
chr7 (40-204)||(25709408-25709570)
chr7 (33-204)||(46290011-46290179)
chr7 (33-204)||(4969773-4969942)
chr7 (33-204)||(19889341-19889509)
chr7 (33-142)||(19868114-19868221)
chr7 (33-204)||(34270266-34270430)
chr7 (33-204)||(9331962-9332130)
chr7 (33-204)||(23982764-23982933)
chr7 (126-204)||(33072072-33072150)
chr7 (34-204)||(36548469-36548636)
chr7 (33-186)||(47707911-47708065)
chr7 (60-150)||(3530177-3530264)
chr7 (60-204)||(8091321-8091463)
chr7 (158-204)||(26050470-26050516)
chr7 (158-204)||(26059829-26059875)
chr7 (126-204)||(29398143-29398221)
chr7 (33-98)||(24250314-24250379)
chr7 (33-98)||(29398227-29398292)
chr7 (43-122)||(12650831-12650911)
[»] chr8 (45 HSPs)
chr8 (33-204)||(26682068-26682237)
chr8 (33-204)||(6818017-6818186)
chr8 (33-204)||(31812113-31812282)
chr8 (33-204)||(3306064-3306232)
chr8 (33-204)||(20514632-20514802)
chr8 (33-204)||(2161388-2161556)
chr8 (33-98)||(7750668-7750733)
chr8 (33-197)||(12131983-12132145)
chr8 (33-204)||(9580118-9580287)
chr8 (33-140)||(14816198-14816303)
chr8 (33-140)||(14829437-14829542)
chr8 (33-148)||(38843704-38843817)
chr8 (33-98)||(11923015-11923080)
chr8 (33-98)||(38527821-38527886)
chr8 (69-204)||(39024866-39024998)
chr8 (33-204)||(12189597-12189766)
chr8 (33-204)||(12434025-12434194)
chr8 (62-148)||(34741730-34741813)
chr8 (33-119)||(8284660-8284747)
chr8 (33-197)||(45005970-45006131)
chr8 (41-118)||(5298077-5298157)
chr8 (33-204)||(13327950-13328118)
chr8 (33-140)||(35678347-35678452)
chr8 (33-204)||(36967079-36967248)
chr8 (33-98)||(7140571-7140636)
chr8 (33-98)||(9824959-9825024)
chr8 (53-147)||(16445801-16445893)
chr8 (33-98)||(40210933-40210998)
chr8 (34-94)||(11947016-11947076)
chr8 (33-141)||(9743862-9743967)
chr8 (40-148)||(10974619-10974725)
chr8 (35-204)||(28014867-28015032)
chr8 (126-204)||(2083078-2083156)
chr8 (33-79)||(11117129-11117175)
chr8 (33-204)||(26834561-26834730)
chr8 (33-144)||(32186186-32186295)
chr8 (31-81)||(37523756-37523806)
chr8 (33-75)||(38213081-38213123)
chr8 (60-118)||(44091346-44091404)
chr8 (33-98)||(10129104-10129169)
chr8 (33-98)||(12346006-12346071)
chr8 (60-117)||(45516316-45516373)
chr8 (41-201)||(1844572-1844731)
chr8 (35-118)||(35583368-35583453)
chr8 (34-98)||(40568314-40568378)
[»] chr2 (32 HSPs)
chr2 (33-203)||(15411632-15411800)
chr2 (33-204)||(9747317-9747486)
chr2 (33-197)||(5583574-5583735)
chr2 (33-204)||(14377425-14377593)
chr2 (33-118)||(12438740-12438825)
chr2 (42-204)||(45062207-45062367)
chr2 (33-204)||(23932565-23932734)
chr2 (33-204)||(27665053-27665221)
chr2 (33-196)||(43806360-43806521)
chr2 (70-204)||(24729586-24729718)
chr2 (33-197)||(34213965-34214129)
chr2 (33-141)||(34817544-34817649)
chr2 (33-122)||(39367059-39367149)
chr2 (33-204)||(7757795-7757963)
chr2 (33-98)||(12016667-12016732)
chr2 (86-188)||(2579983-2580082)
chr2 (34-98)||(7720116-7720180)
chr2 (128-204)||(26003355-26003431)
chr2 (58-142)||(2051639-2051721)
chr2 (33-119)||(43388857-43388944)
chr2 (33-204)||(19228426-19228594)
chr2 (33-148)||(36612796-36612909)
chr2 (33-148)||(36620647-36620760)
chr2 (33-83)||(36909503-36909553)
chr2 (33-99)||(39904159-39904225)
chr2 (33-98)||(4579901-4579966)
chr2 (33-90)||(16754971-16755028)
chr2 (33-98)||(16919266-16919331)
chr2 (33-98)||(22705455-22705520)
chr2 (33-90)||(26003612-26003669)
chr2 (41-124)||(25998088-25998172)
chr2 (33-203)||(26229864-26230030)
[»] chr6 (18 HSPs)
chr6 (33-204)||(6016856-6017025)
chr6 (33-186)||(30623326-30623477)
chr6 (33-196)||(8977483-8977644)
chr6 (33-204)||(34692354-34692523)
chr6 (33-204)||(14228135-14228303)
chr6 (33-204)||(28943778-28943946)
chr6 (50-140)||(29730295-29730383)
chr6 (35-204)||(10887031-10887198)
chr6 (33-202)||(33017725-33017891)
chr6 (33-188)||(1017803-1017956)
chr6 (33-204)||(29863311-29863480)
chr6 (33-98)||(1814894-1814959)
chr6 (33-98)||(3485711-3485776)
chr6 (33-204)||(17552596-17552764)
chr6 (33-98)||(24979262-24979327)
chr6 (35-90)||(17596315-17596370)
chr6 (33-204)||(18332697-18332866)
chr6 (33-98)||(5363005-5363070)
[»] chr5 (24 HSPs)
chr5 (33-204)||(30839782-30839950)
chr5 (33-204)||(36597580-36597748)
chr5 (35-204)||(8103589-8103755)
chr5 (33-197)||(18841721-18841883)
chr5 (33-204)||(3398220-3398389)
chr5 (33-204)||(40512952-40513120)
chr5 (33-140)||(5958196-5958301)
chr5 (33-204)||(11636732-11636900)
chr5 (95-204)||(15240959-15241065)
chr5 (41-122)||(10665053-10665134)
chr5 (33-90)||(11360186-11360243)
chr5 (33-77)||(11250090-11250134)
chr5 (44-141)||(28629890-28629984)
chr5 (33-77)||(33072677-33072721)
chr5 (33-204)||(2795524-2795692)
chr5 (45-99)||(11375972-11376026)
chr5 (126-188)||(15820317-15820379)
chr5 (112-202)||(23995427-23995516)
chr5 (127-197)||(31567507-31567577)
chr5 (33-99)||(34578012-34578078)
chr5 (60-143)||(40309497-40309580)
chr5 (33-98)||(24014800-24014865)
chr5 (86-204)||(6863610-6863725)
chr5 (128-204)||(7162934-7163010)
[»] chr3 (31 HSPs)
chr3 (33-204)||(2571269-2571437)
chr3 (33-204)||(10307767-10307935)
chr3 (33-202)||(54527717-54527884)
chr3 (33-204)||(38389447-38389616)
chr3 (33-204)||(50204403-50204572)
chr3 (32-141)||(20938056-20938162)
chr3 (35-204)||(46492352-46492519)
chr3 (33-204)||(51618050-51618216)
chr3 (50-143)||(53794781-53794872)
chr3 (42-120)||(2379162-2379238)
chr3 (65-194)||(38786343-38786468)
chr3 (33-204)||(11610915-11611083)
chr3 (40-123)||(24569324-24569408)
chr3 (35-118)||(37444149-37444232)
chr3 (32-119)||(40330381-40330468)
chr3 (33-196)||(13495294-13495455)
chr3 (33-196)||(42180052-42180213)
chr3 (33-121)||(37055455-37055544)
chr3 (33-122)||(47386922-47387013)
chr3 (126-202)||(51401531-51401607)
chr3 (33-84)||(8497550-8497601)
chr3 (40-204)||(45983516-45983675)
chr3 (33-119)||(46845531-46845618)
chr3 (44-118)||(13879899-13879973)
chr3 (158-204)||(25633121-25633167)
chr3 (32-98)||(26200733-26200799)
chr3 (33-196)||(12515491-12515651)
chr3 (127-204)||(23523038-23523115)
chr3 (33-117)||(30214103-30214187)
chr3 (33-98)||(32321835-32321899)
chr3 (126-203)||(49396471-49396548)
[»] scaffold0111 (1 HSPs)
scaffold0111 (33-204)||(37123-37292)
[»] scaffold0631 (1 HSPs)
scaffold0631 (34-77)||(443-486)
[»] scaffold0129 (1 HSPs)
scaffold0129 (40-148)||(13723-13829)
[»] scaffold0618 (1 HSPs)
scaffold0618 (60-118)||(8506-8564)
[»] scaffold0061 (1 HSPs)
scaffold0061 (33-204)||(52788-52956)
[»] scaffold0036 (1 HSPs)
scaffold0036 (34-145)||(94086-94195)
[»] scaffold0017 (1 HSPs)
scaffold0017 (33-204)||(145678-145846)
[»] scaffold0011 (1 HSPs)
scaffold0011 (33-204)||(13086-13254)
[»] scaffold0305 (1 HSPs)
scaffold0305 (95-197)||(18012-18111)
[»] scaffold0149 (1 HSPs)
scaffold0149 (33-77)||(22460-22504)


Alignment Details
Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 32 - 244
Target Start/End: Complemental strand, 23378683 - 23378472
Alignment:
Q  32 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  23378683 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacaattatttgttaaaaagttacactatatt 23378584  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatgagtctaggctttataccaaaaataaaac 231  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  23378583 taatataaaatgtacaaatagcaattcaaatttactattttgaaattcttaacatgttcaaatttgtacatgagtctaggc-ttataccaacaataaaac 23378485  T
Q  232 atcatcaaataaa 244  Q
    |||||||||||||    
T  23378484 atcatcaaataaa 23378472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 23591698 - 23591867
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || |||||||| |||||||||||| ||| |||||||||||||| || | |||||| |||||||||||   ||||||    
T  23591698 gtttgtctaacatgtgcaacattgcacatgttaaagcaactaaaattagtaagtttttattgaaaatcaataattatttattaaaaagtta---tatatt 23591794  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||| ||||||||||| |  |||| |||| ||   ||||  || |||||||||||| |||||||| ||||||    
T  23591795 taatacaaaatgtacaagttccaatgcaaagttgttatttaaaatttcttaacatgtgcaaatttgcacatga 23591867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 1502897 - 1502729
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||| |||| ||||||   |||||||||   |||||||    
T  1502897 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattgaaaacaacaattatttaacaaaaagtta---tatattt 1502801  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||| ||||||| |||||  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  1502800 aatacaaaatgttcaaattccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 1502729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 38812740 - 38812909
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 131  Q
    ||||||||||||||||||| |||  | |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  38812740 gtttgtttaacatgtgcaacattgtacatgttaaaacaactaatagtagtaactttttcttagaaaacaacaattatttattcaaaagtt---ttatatt 38812836  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| |||||||||| |  ||||  ||| || | |||||||| |||||||||||| |||||||| ||||||    
T  38812837 taatattaaatgtacaagtttcaatataaaatttctattttgaacttcttaacatgtgcaaatttgcacatga 38812909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 13321876 - 13322045
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| |||  | |||||||||||||||| | || ||||||||| |||||||  |||| |||||| || |||||||    ||||||    
T  13321876 gtttgtctaacatgtgcaacattgtacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattattttttcaaaagttt---tatatt 13321972  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| ||||||||||||  |||| |||| || | ||||| || |||||||||| | |||||||| ||||||    
T  13321973 taatattaaatgtacaaattccaatacaaaatttctattttaaacttcttaacatatgcaaatttgcacatga 13322045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 30171879 - 30172048
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || ||||||| ||| |||||| || ||| ||||||||| |||| || | |||||| |||||||| |||   |||||    
T  30171879 gtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctac---atatt 30171975  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| ||||| |||| |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  30171976 taatatgaaatgcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatga 30172048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 30187420 - 30187589
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || ||||||| ||| |||||| || ||| ||||||||| |||| || | |||||| |||||||| |||   |||||    
T  30187420 gtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctac---atatt 30187516  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| ||||| |||| |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  30187517 taatatgaaatgcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatga 30187589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 23576591 - 23576423
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||| ||||||||| || |||||||   |||||||| ||| || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  23576591 gtttgtctaacatctgcaatattgcacatgttaaggtaactaaaagtaacaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 23576495  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  23576494 aatacaaaatgttcaagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 23576423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 6754474 - 6754640
Alignment:
Q  35 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaa 134  Q
    |||| |||||||||||||||| || |||||||  ||||||||| || ||||||||||||||||  |||| ||| || |||||||  |||   ||| ||||    
T  6754474 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctac---ataattaa 6754570  T
Q  135 tataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||||| |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  6754571 tataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 6754640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 197
Target Start/End: Original strand, 36490795 - 36490941
Alignment:
Q  49 caatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatttaatataaaatgtaca 147  Q
    ||||||| || |||||||| ||| ||||| || ||| |||||||||||||  |||| |||||| |||||||||||   |||||| |||| ||||||||||    
T  36490795 caatattgcacatgttaaagcaattaaaagtagtaagtttttattgaaaaacaacaattatttattaaaaagtta---tatattaaatacaaaatgtaca 36490891  T
Q  148 aatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 197  Q
    | |  |||| |||| |||| ||||| || |||||||||||| ||||||||    
T  36490892 agttccaatgcaaagttactattttaaacttcttaacatgtgcaaatttg 36490941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 41624832 - 41624998
Alignment:
Q  35 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaa 134  Q
    |||| |||||||||||||||| || |||||||| ||||||||| || ||||||||||||||||  |||| ||| || |||||||  |||   ||| ||||    
T  41624832 ttgtctaacatgtgcaatattgcacatgttaaagcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctac---ataattaa 41624928  T
Q  135 tataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||||| |||| |  ||| ||||| |||| | ||| || |||||| ||| | |||||||| ||||||    
T  41624929 tataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatatgcaaatttgcacatga 41624998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 6180186 - 6180355
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || |||||| | | |||||| || |||||||    ||||||    
T  6180186 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaattataattatttatttaaaagtt---ttatatt 6180282  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| |||||||||| |  ||||  ||| || | ||||| || |||||||||||| |||||||| ||||||    
T  6180283 taatattaaatgtacaagttccaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 6180355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 39150504 - 39150336
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || |||||||  ||||||||| || |||||||| ||||||||  |||| |||||| || |||||||||   |||||    
T  39150504 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttac---atatt 39150409  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||||||   ||||||  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  39150408 taatataaaaaacacaaattccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 39150336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 181
Target Start/End: Complemental strand, 39627749 - 39627603
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 131  Q
    |||||| ||||||||||||||||||| |||||||   |||||||| ||  ||||||| ||||||||  |||| | | || || ||||||||||   ||||    
T  39627749 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaaaatagcaacttttaattgaaaaacaacaatcacttattgaaaagttaca---tatt 39627653  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattctt 181  Q
    |||||||||||| |||| |  |||| ||||||||| |||||||| |||||    
T  39627652 taatataaaatgcacaagttacaatacaaatttactattttgaacttctt 39627603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 35512725 - 35512894
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||| | || |||||||    ||||||    
T  35512725 gtttgtctaacatgtgcaacattgcaaatgttaaaacaactaatagtagtaactttttcttggaaaacaacatttatatattcaaaagtt---ttatatt 35512821  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| |||||| ||| |  ||||  ||| || | ||||| || |||||||||||| |||||||| ||||||    
T  35512822 taatattaaatgtgcaagttccaatataaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 35512894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 47355544 - 47355403
Alignment:
Q  44 atgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatg 143  Q
    |||||||||||| || |||||||| ||||||||| ||  |||||||||||||||| |||| ||| || | |||||| ||   |||  |||||||||||||    
T  47355544 atgtgcaatattgcacatgttaaagcaactaaaagtataaactttttattgaaaacaacaattacttatcaaaaaggta---tatcattaatataaaatg 47355448  T
Q  144 tacaaatagcaattcaaatttaccattttgaaattcttaacatgt 188  Q
     |||| |  |||| ||||||||  ||||| || ||||||||||||    
T  47355447 aacaagttccaatacaaatttattattttaaatttcttaacatgt 47355403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 199
Target Start/End: Complemental strand, 7825036 - 7824872
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || |||||  ||| |||||| || |||||||    ||||||    
T  7825036 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaaccacaattatttattcaaaagtt---ttatatt 7824940  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgta 199  Q
    |||||| ||||||||||||  || | |||| ||   ||||| || || ||||||||| ||||||||||    
T  7824939 taatattaaatgtacaaatttcattacaaaatttttattttaaactttttaacatgtgcaaatttgta 7824872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 22167335 - 22167504
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgtt-aaaaagttacactatat 130  Q
    |||||| || ||||||||| ||| || |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || ||||| ||    |||||    
T  22167335 gtttgtctaccatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaaaatt----tatat 22167430  T
Q  131 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||| |||||||||| |  |||| |||| || | ||||| || |||||| ||||| |||||||| ||||||    
T  22167431 ttaatattaaatgtacaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaatttgcacatga 22167504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 7520164 - 7520022
Alignment:
Q  44 atgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatttaatataaaat 142  Q
    |||||||||||| || |||||||| ||||||||| || ||| ||||||||  ||||||| | |||||| |||||| ||||   |||||| |||| |||||    
T  7520164 atgtgcaatattgcacatgttaaagcaactaaaagtagtaaatttttattaaaaaataatacttatttattaaaatgtta---tatattaaatacaaaat 7520068  T
Q  143 gtacaaatagcaattcaaatttaccattttgaaattcttaacatgt 188  Q
    ||||||||  |||| |||| ||   ||||| || ||||||||||||    
T  7520067 gtacaaatttcaatgcaaagttgttattttaaacttcttaacatgt 7520022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 52337821 - 52337935
Alignment:
Q  87 ttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacat 186  Q
    ||||||| | ||||||| |||||| ||||||| |||   |||||||||||||||||  | || | ||||| || |||||| ||||| || ||||||||||    
T  52337821 ttttattaataataacaattatttattaaaaattta---tatatttaatataaaatacataagttgcaatgcatatttactattttaaacttcttaacat 52337917  T
Q  187 gttcaaatttgtacatga 204  Q
    ||||||| |||| |||||    
T  52337918 gttcaaacttgttcatga 52337935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 17919454 - 17919622
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| ||||||||||||||||  | |||||||  ||||||||| || |||||||| ||||||||  |||| |||||| || |||||||||   |||||    
T  17919454 gtttgtctaacatgtgcaatattgtacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttac---atatt 17919549  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||||||   ||||||  ||| ||||| |||| | ||| || ||||||  |||| |||||||| ||||||    
T  17919550 taatataaaaaacacaaattccaagtcaaagttactactttaaacttcttattatgtgcaaatttgcacatga 17919622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 5857990 - 5858079
Alignment:
Q  34 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataa-cagttatttgttaaaaagtta 122  Q
    ||||||||||||||||||||||  | || ||||||||| ||||| ||| ||||||||||| |||| ||  | |||||| |||||||||||    
T  5857990 tttgtttaacatgtgcaatatttgacatattaaaacaattaaaagtaacaactttttattaaaaacaagtaattatttattaaaaagtta 5858079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 29924429 - 29924356
Alignment:
Q  30 tttgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataaca 103  Q
    ||||||||| |||||| |||||  ||||| ||| |||| ||||||||| ||| || ||||||||||||||||||    
T  29924429 tttgtttgtctaacatatgcaacgttacacatgctaaagcaactaaaaataacaattttttattgaaaataaca 29924356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 25465276 - 25465327
Alignment:
Q  153 caattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||| ||||||||| |||||||| |||||||||||| |||||||| ||||||    
T  25465276 caatgcaaatttactattttgaacttcttaacatgtgcaaatttgcacatga 25465327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 145
Target Start/End: Complemental strand, 34050461 - 34050351
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || |||||||| |||| |||| ||| || || |||||| |||| |||| |||||| | ||||| |||   ||||||    
T  34050461 gtttgtctaacatgtgcaatattgcacatgttaaagcaaccaaaagtaacaaattattattgaaaaacaacaattatttatcaaaaaatta---tatatt 34050365  T
Q  132 taatataaaatgta 145  Q
     |||||||||||||    
T  34050364 aaatataaaatgta 34050351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 44918025 - 44918091
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 99  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || ||| ||||||||||||||    
T  44918025 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaaatttttattgaaaat 44918091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 144
Target Start/End: Original strand, 3121119 - 3121227
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| ||| |||||||||||||||||||||||   || ||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  3121119 gtttgtctaatatgtgcaatattacatatgttaaggtaattaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 3121215  T
Q  133 aatataaaatgt 144  Q
    |||| |||||||    
T  3121216 aatacaaaatgt 3121227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 8062206 - 8062271
Alignment:
Q  34 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 99  Q
    ||||||||||||||||||||||  | |||||||   |||||||| || |||||||| |||||||||    
T  8062206 tttgtttaacatgtgcaatattgaacatgttaaggtaactaaaagtagtaacttttcattgaaaat 8062271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 33048227 - 33048175
Alignment:
Q  95 aaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaat 150  Q
    ||||||||| |||||| |||||||||||   ||||||||||||||||| |||||||    
T  33048227 aaaataacaattatttattaaaaagtta---tatatttaatataaaatatacaaat 33048175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 35941167 - 35941110
Alignment:
Q  65 aaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagtta 122  Q
    |||| |||||||| || |||||||||||| |||| |||| |||||| |||||||||||    
T  35941167 aaaagaactaaaagtattaactttttattaaaaacaacatttatttattaaaaagtta 35941110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 43317498 - 43317575
Alignment:
Q  41 aacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 118  Q
    |||||||||||||||  | |||||||| ||||||||| || ||||| ||| ||||||| |||| | |||| |||||||    
T  43317498 aacatgtgcaatattgtacatgttaaagcaactaaaagtagtaactattttttgaaaacaacaatcatttattaaaaa 43317575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 142
Target Start/End: Original strand, 50079870 - 50079966
Alignment:
Q  45 tgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaat 142  Q
    |||||||||||| |||||||||| ||| ||||| || |||||||||||| |||| |  | |||||| ||||||| ||| |   |||||||||||||||    
T  50079870 tgtgcaatattatatatgttaaagcaattaaaa-tagtaactttttattaaaaaaattaattatttattaaaaaattatatattatttaatataaaat 50079966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 51382372 - 51382437
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||    
T  51382372 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 51382437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 150
Target Start/End: Original strand, 25956665 - 25956764
Alignment:
Q  49 caatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatttaatataaaatgtaca 147  Q
    ||||||| || || ||||||||||||| | |||||||||||| ||| |||| |||| |||||| || |||||||    |||||||||||| ||||||| |    
T  25956665 caatattgcacatattaaaacaactaataataataactttttcttgaaaaacaacaattatttatttaaaagtt---ttatatttaatattaaatgtata 25956761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 2096871 - 2097032
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || | |||||| ||||||||| | | ||||||||||||||||  |||| |||||| |||||||||||   ||||||    
T  2096871 gtttgtctaacatgtgcaatattgcacaagttaaatcaactaaaagtgacaactttttattgaaaaacaacaattatttattaaaaagtta---tatatt 2096967  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 196  Q
    |||||||||||| |||| |  |||| |||| ||||||||||||| |||||||||||| |||||||    
T  2096968 taatataaaatgcacaagttccaatacaaacttaccattttgaacttcttaacatgtgcaaattt 2097032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 24684836 - 24685006
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt--gaaaataacagttatttgttaaaaagttacactatat 130  Q
    ||||||||||||| ||||| |||||| |||||||||||||||| | || ||||||||| ||  ||||| |||| |||||| || |||||||    |||||    
T  24684836 gtttgtttaacatttgcaacattacacatgttaaaacaactaatagtagtaactttttttttggaaaacaacaattatttattcaaaagtt---ttatat 24684932  T
Q  131 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  24684933 ttaatattaaatgtacaagttccaatgcaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 24685006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 9759319 - 9759151
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  9759319 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 9759223  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||||||||||    
T  9759222 aatacaaaatgttcaacttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgtacatga 9759151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 202
Target Start/End: Original strand, 19468194 - 19468361
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  19468194 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 19468290  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 202  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||    
T  19468291 taatattaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacat 19468361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 202
Target Start/End: Complemental strand, 19451076 - 19450911
Alignment:
Q  35 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatattta 133  Q
    |||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || |||||||    ||||||||    
T  19451076 ttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttt---tatattta 19450980  T
Q  134 atataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 202  Q
    |||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||    
T  19450979 atattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacat 19450911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 16667562 - 16667393
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || ||||||| ||| |||||| || ||| |||| |||| |||| |||| |||||| |||||||| |||   |||||    
T  16667562 gtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaacacttatttattaaaaagctac---atatt 16667466  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||||||||  |||| |  ||| | ||| ||| |||||| || |||||||||||| |||||||| ||||||    
T  16667465 taatataaaatacacaagtttcaagttaaaattatcattttaaacttcttaacatgtgcaaatttgcacatga 16667393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 197
Target Start/End: Original strand, 50352303 - 50352464
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  50352303 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 50352399  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 197  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| ||||||||    
T  50352400 aatacaaaatgttcaagttccaatgcaaaattactattttaaatttcttaacatgtgcaaatttg 50352464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 17409824 - 17409993
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgtt-aaaaagttacactatat 130  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || ||||| ||    |||||    
T  17409824 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaaaatt----tatat 17409919  T
Q  131 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||| |||||||||| |  |||| |||| || | ||||| || |||||| ||||| |||||||| ||||||    
T  17409920 ttaatattaaatgtacaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaatttgcacatga 17409993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 49181074 - 49181241
Alignment:
Q  35 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatattta 133  Q
    |||| ||| |||||||||||| || |||||||   |||||||| ||  ||| ||| ||||||||  |||| | |||| || ||||||||||   ||||||    
T  49181074 ttgtctaaaatgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttaca---tattta 49181170  T
Q  134 atataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||||||| |||| |  |||| ||||||||| |||||||| ||||||||| || |||||||| ||||||    
T  49181171 atataaaatgcacaagttacaatacaaatttactattttgaacttcttaacaggtgcaaatttgcacatga 49181241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 141
Target Start/End: Original strand, 7349689 - 7349794
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| ||||| |||||||||| || |||||||  ||||||||| ||||||||||| ||||||||  |||| ||||||||| |||||||||   |||||    
T  7349689 gtttgtctaacacgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacaattatttgtt-aaaagttac---atatt 7349784  T
Q  132 taatataaaa 141  Q
    ||||||||||    
T  7349785 taatataaaa 7349794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 10813658 - 10813587
Alignment:
Q  47 tgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaa 117  Q
    ||||||||| ||||||||||  ||||||||| ||||||||||||||||||||  |||| |||||||||||||    
T  10813658 tgcaatattgcatatgttaaggcaactaaaagtaataactttttattgaaaaccaacaattatttgttaaaa 10813587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 202
Target Start/End: Original strand, 40049559 - 40049725
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || ||| ||||||| ||||  |||| ||||||   ||||| |||   |||||||    
T  40049559 gtttgtctaacatgtgcaatattgcacatgttaaagtaactaaaagtagtaagtttttatagaaaccaacaattatttaacaaaaaatta---tatattt 40049655  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 202  Q
    |||| |||||||  || |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||    
T  40049656 aataaaaaatgttaaagttccaatgcaaaattactattttaaatttcttaacatgtgcaaatttgcacat 40049725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 8736988 - 8736828
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || ||||||| ||| |||||| || ||| ||||||||| |||| || | |||||| ||||||||||||   |||||    
T  8736988 gtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagttac---atatt 8736892  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 196  Q
    |||||| ||||| || | |  ||| ||||| |||||| ||| || |||||||||||| |||||||    
T  8736891 taatatgaaatgcac-agttccaagtcaaagttaccactttaaatttcttaacatgtgcaaattt 8736828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 23545476 - 23545645
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||| ||||| ||| |||| |||| |||||| || |||||||    ||||||    
T  23545476 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttgaaaaacaacaattatttattcaaaagtt---ttatatt 23545572  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| |||||||||| |  |||| |||| ||   ||||| || || ||||||||| |||||||| ||||||    
T  23545573 taatattaaatgtacaatttccaatacaaaatttatattttaaacttattaacatgtgcaaatttgcacatga 23545645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 27019260 - 27019429
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||| ||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  27019260 gtttgtctaacgtgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 27019356  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || || ||||||| | |||||||| ||||||    
T  27019357 taatattaaatgtacaagtttcaatacaaaatttctattttaaactttttaacatatgcaaatttgcacatga 27019429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 34941278 - 34941447
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| ||||||||| |||||| || || ||||   |||||||| ||| |||||||||||| |||| ||||  ||||| |||||||||||   ||||||    
T  34941278 gtttgtctaacatgtgtaatattgcacatattaaggtaactaaaagtaacaactttttattgaaaaacaacaactatttattaaaaagtta---tatatt 34941374  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
     |||| ||||||||||| |  |||| |||| |||| ||||| || |||||| ||||| |||||| | ||||||    
T  34941375 aaatacaaaatgtacaagttccaatgcaaaattactattttaaacttcttatcatgtgcaaattcgcacatga 34941447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 196
Target Start/End: Complemental strand, 37785001 - 37784877
Alignment:
Q  70 aactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttacca 168  Q
    |||||||| ||  ||||||||||||||||  || | | |||| |||||||||||||   ||||||| |||||||| ||||||  ||||  |||||||| |    
T  37785001 aactaaaagtagcaactttttattgaaaaacaataatcatttattaaaaagttaca---tatttaacataaaatgcacaaattacaatataaatttacta 37784905  T
Q  169 ttttgaaattcttaacatgttcaaattt 196  Q
    ||||||| |||||||||||| |||||||    
T  37784904 ttttgaacttcttaacatgtccaaattt 37784877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 6875501 - 6875608
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||| ||||||||| || |||||||||||||||||| || |||  ||||||| ||||||| || |||||| || ||||||||   || |||    
T  6875501 gtttgtctaacatttgcaatattgcacatgttaaaacaactaaaaatagtaatattttattggaaaatatcaattatttattgaaaagtta---taaatt 6875597  T
Q  132 taatataaaat 142  Q
    |||||||||||    
T  6875598 taatataaaat 6875608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 149
Target Start/End: Original strand, 25843291 - 25843406
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaag-ttacactatat 130  Q
    |||||| |||||||| |||||| | | |||||||| ||||||||| || |||||||||||||||||  ||||   ||||||||||||| |||   |||||    
T  25843291 gtttgtctaacatgtacaatataatacatgttaaagcaactaaaagtagtaactttttattgaaaaacaacaaccatttgttaaaaagctta---tatat 25843387  T
Q  131 ttaatataaaatgtacaaa 149  Q
    ||||||||||||| |||||    
T  25843388 ttaatataaaatgcacaaa 25843406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 204
Target Start/End: Original strand, 27362406 - 27362560
Alignment:
Q  48 gcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatttaatataaaatgtac 146  Q
    |||| ||| |||||||||| | | |||||| || ||| |||||||||||||  || | |||||| | |||||| ||||   |||||||||| ||||| ||    
T  27362406 gcaacattgcatatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttatcaaaaagctaca---tatttaatatgaaatgcac 27362502  T
Q  147 aaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  27362503 aaattccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatga 27362560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 52391298 - 52391459
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 131  Q
    |||||| ||| ||||| ||| || || ||||||||| |||||| | || ||||||||| |||||||  |||| |||||| || |||||||    ||||||    
T  52391298 gtttgtctaatatgtgtaatgttgcacatgttaaaataactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagttt---tatatt 52391394  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 196  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||    
T  52391395 taatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaattt 52391459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 54495815 - 54495646
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || ||||||| | | |||||| || ||| ||||| |||||||  || | |||||| |||||||| ||||   ||||    
T  54495815 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaatttttttttgaaaaacaaaacttatttattaaaaagctaca---tatt 54495719  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| ||||| |||| |  ||| | ||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  54495718 taatatgaaatgcacaagttccaagttaaagttaccactttaaacttcttaacatgtgcaaatttgcacatga 54495646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 10389445 - 10389380
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| ||||||||||||||||||| |||||| |  |||||||| || |||||||| ||||||||    
T  10389445 gtttgtctaacatgtgcaatattacacatgttatagtaactaaaagtattaacttttaattgaaaa 10389380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 33632379 - 33632267
Alignment:
Q  34 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatattt 132  Q
    ||||| |||||||||||| |||| | |||| ||||||||||| | || ||||||||| ||| |||| |||| |||||| || |||||||    |||||||    
T  33632379 tttgtctaacatgtgcaacattatacatgtaaaaacaactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagtt---ttatattt 33632283  T
Q  133 aatataaaatgtacaa 148  Q
    ||||| ||||||||||    
T  33632282 aatattaaatgtacaa 33632267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 40681960 - 40682017
Alignment:
Q  44 atgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataa 101  Q
    |||||||||||| ||||||||||  ||||||||| || ||| ||||||||||||||||    
T  40681960 atgtgcaatattgcatatgttaagtcaactaaaaatagtaattttttattgaaaataa 40682017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 49228357 - 49228422
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| |||||||||||||||| ||||||||||   |||||||| || |||||||| ||||||||    
T  49228357 gtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaa 49228422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 195
Target Start/End: Original strand, 1378075 - 1378178
Alignment:
Q  89 ttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgt 188  Q
    |||||||||| | || |||||| |||||| ||||   |||||||||||| |||||||||| |  |||   |||||||||||||| || ||||||||||||    
T  1378075 ttattgaaaacatcaattatttattaaaatgtta---tatatttaatattaaatgtacaagtttcaagataaatttaccattttaaatttcttaacatgt 1378171  T
Q  189 tcaaatt 195  Q
     ||||||    
T  1378172 gcaaatt 1378178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 19838866 - 19838756
Alignment:
Q  34 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattta 133  Q
    ||||| ||||||||| || ||| || |||||||||||||||| | |||||||||||| ||  ||| |||| |||||| || |||||||    ||||||||    
T  19838866 tttgtctaacatgtggaacattgcacatgttaaaacaactaatagtaataacttttt-ttttaaacaacaattatttattcaaaagtt---ttatattta 19838771  T
Q  134 atataaaatgtacaa 148  Q
    |||| ||||||||||    
T  19838770 atattaaatgtacaa 19838756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 196
Target Start/End: Original strand, 39876844 - 39876991
Alignment:
Q  46 gtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgta 145  Q
    |||||||||| || |||||||   |||||||| || ||| ||||||||||||  |||| ||||||   |||||||||   ||||||| ||| |||||||     
T  39876844 gtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaaccaacaattatttaacaaaaagtta---tatatttgatacaaaatgtt 39876940  T
Q  146 caaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 196  Q
    ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||    
T  39876941 caagttccaatgcaaagttactattttaaatttcttaacatgtgcaaattt 39876991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 45742368 - 45742431
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaa 96  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| |||||    
T  45742368 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtattaactttttcttgaa 45742431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 55813920 - 55814026
Alignment:
Q  89 ttattgaaaat-aacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatg 187  Q
    ||||||||||| |||| |||||| |||||||||||   ||||||||||| | |||||||||||  |||| |||| |||  ||||| || || ||||||||    
T  55813920 ttattgaaaatcaacaattatttattaaaaagtta---tatatttaatacagaatgtacaaatttcaatacaaaattattattttaaactttttaacatg 55814016  T
Q  188 ttcaaatttg 197  Q
    | ||||||||    
T  55814017 tgcaaatttg 55814026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 13009909 - 13009820
Alignment:
Q  57 catatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatttaatataaaatgtacaa 148  Q
    ||||||||||||||||||||| || ||| ||||||||||||| ||| | ||||||  ||||||| ||   ||||||||||| ||||| |||||    
T  13009909 catatgttaaaacaactaaaagtattaagtttttattgaaaactaataattatttactaaaaagcta---tatatttaatacaaaatatacaa 13009820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 47327070 - 47326901
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||| ||||||| ||| || ||||||| ||| |||||| || ||| |||| ||||||||  || | |||||| |||||||  ||||   ||||    
T  47327070 gtttgtctaacctgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactaca---tatt 47326974  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| ||||| | || |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  47326973 taatatgaaatgcaaaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatga 47326901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 47341866 - 47341697
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||| ||||||| ||| || ||||||| ||| |||||| || ||| |||| ||||||||  || | |||||| |||||||  ||||   ||||    
T  47341866 gtttgtctaacctgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactaca---tatt 47341770  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| ||||| | || |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  47341769 taatatgaaatgcaaaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatttgcacatga 47341697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 49332333 - 49332423
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagtta 122  Q
    |||||| |||||||||||||||| || |||||||   || ||||| ||||||||||| |||| ||||||  | |||||| |||||||||||    
T  49332333 gtttgtctaacatgtgcaatatttcacatgttaaggtaattaaaagtaataacttttcattgaaaaatattaattatttattaaaaagtta 49332423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 10658621 - 10658544
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttattt 110  Q
    |||||| ||||||||||||||||||| |||||||   |||||||| ||  || ||||||||||||  |||| ||||||    
T  10658621 gtttgtctaacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattattt 10658544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 10872766 - 10872689
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttattt 110  Q
    |||||| ||||||||||||||||||| |||||||   |||||||| ||  || ||||||||||||  |||| ||||||    
T  10872766 gtttgtctaacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattattt 10872689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 51691343 - 51691502
Alignment:
Q  34 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatattt 132  Q
    ||||| ||| |||||||| ||| || |||||||| |||||||||| | ||| | ||||||||||| ||| | |||||| |||||||| ||   |||||||    
T  51691343 tttgtctaaaatgtgcaacattgcacatgttaaagcaactaaaat-agtaagtctttattgaaaactaataattatttattaaaaagcta---tatattt 51691438  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 196  Q
    |||  ||||| ||||| |  |||| |||| |||| ||||  || |||||||||||| |||||||    
T  51691439 aattcaaaatatacaagttccaatgcaaagttactatttaaaatttcttaacatgtgcaaattt 51691502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 3728249 - 3728317
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataac-tttttattgaaaata 100  Q
    |||||| |||||||| |||||||  | |||||| ||||||||||| || |||| |||||||||||||||    
T  3728249 gtttgtctaacatgtacaatattgaacatgttataacaactaaaagtagtaacttttttattgaaaata 3728317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 18882352 - 18882276
Alignment:
Q  128 tatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  18882352 tatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 18882276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 143
Target Start/End: Complemental strand, 35645126 - 35645071
Alignment:
Q  86 tttttattgaaaa-taacagttatttgttaaaaagttacactatatttaatataaaatg 143  Q
    ||||||||||||| ||||| |||||| |||||||||||   ||||||||||||||||||    
T  35645126 tttttattgaaaaataacaattatttattaaaaagtta---tatatttaatataaaatg 35645071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 143
Target Start/End: Original strand, 42750289 - 42750396
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| || | |||||| ||||||||||||| |   |||    
T  42750289 gtttgtttaacatgtgcaatattgcatatgttaaagcaactaaaaataataactttttattgaaaacaataattatttattaaaaagttacaat---ttt 42750385  T
Q  133 aatataaaatg 143  Q
    |||||||||||    
T  42750386 aatataaaatg 42750396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 204
Target Start/End: Complemental strand, 47457638 - 47457470
Alignment:
Q  34 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataa-ctttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    ||||| |||||||||||||||| || |||||||||||||||||| || |||  |||||||||||||||||| |||||| || ||||| |||||   || |    
T  47457638 tttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaataacaattatttatttaaaagctacac---atat 47457542  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||||||| | ||||  ||| ||||| |||| | ||| || || ||||||||| |||||||| ||||||    
T  47457541 aatataaaatgcataaattccaagtcaaagttactactttaaattttttaacatgtgcaaatttgcacatga 47457470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 204
Target Start/End: Original strand, 26300572 - 26300740
Alignment:
Q  32 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatt 131  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||| || ||| | | ||||||||| || |   | || |||||||||||   || |||    
T  26300572 tgtttgtctaacatgtgtaatattgcatatgttaaaacaactaaaagtattaattctgtattgaaaa-aaaaaaaaattattaaaaagtta---tacatt 26300667  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||| ||||| ||||| |  ||||||||| |||| ||||| || || ||||||||| |||||||||||||||    
T  26300668 taatacaaaatatacaagtttcaattcaaagttactattttaaactttttaacatgtgcaaatttgtacatga 26300740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 24463132 - 24462964
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| ||||||||| |||||| || |||||||  ||||||||| || ||| || |||||||||| ||||  ||||| |||||||  ||||   |||||    
T  24463132 gtttgtctaacatgtgaaatatttcacatgttaaggcaactaaaagtagtaatttcttattgaaaacaacaagtatttattaaaaaactaca---tattt 24463036  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||||||||||||||    || ||||| |||  ||||| || |||||||||||| |||||||| ||||||    
T  24463035 aatataaaatgtacaaactttaagtcaaagttattattttaaacttcttaacatgtgcaaatttgcacatga 24462964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 33342989 - 33343157
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  33342989 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 33343085  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  33343086 aatacaaaatgttcaagttccaatacaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 33343157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 7170005 - 7170171
Alignment:
Q  35 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaa 134  Q
    |||| |||||||||||||||| || |||||||  ||||||||| || ||||||||||||||||  |||| ||| || |||||||  |||   ||| ||||    
T  7170005 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctac---ataattaa 7170101  T
Q  135 tataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||||| |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  7170102 tataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 7170171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 204
Target Start/End: Complemental strand, 25709570 - 25709408
Alignment:
Q  40 taacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattga-aaataacagttatttgttaaaaagttacactatatttaatata 138  Q
    ||||||||| |||||| || |||||||| ||||||||| || ||| |||||||||| ||| |||| | |||| |||||||| |||    ||||||||||     
T  25709570 taacatgtgaaatattgcacatgttaaatcaactaaaagtagtaattttttattgataaacaacaataatttattaaaaagctacc---tatttaatatg 25709474  T
Q  139 aaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||| |||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  25709473 aaatgaacaagttccaatacaaagttactattttaaacttcttaacatgtgcaaatttgcacatga 25709408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 46290011 - 46290179
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||| ||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  46290011 gtttgtctaacatgtgcaaaattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 46290107  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  46290108 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 46290179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 4969773 - 4969942
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || || |||||| ||| ||||  | | |||||| || |||||||    ||||||    
T  4969773 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtagctttttcttggaaaactataattatttatttaaaagttt---tatatt 4969869  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  4969870 taatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 4969942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 19889341 - 19889509
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || |||||||  ||||||||| || |||||||| ||||||||  |||| |||||| || |||||||||   |||||    
T  19889341 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttac---atatt 19889436  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||||||   |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  19889437 taatataaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 19889509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 19868114 - 19868221
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || ||||||| |||||||||| || ||| |||| |||| |||| | || |||||| | |||||||||   ||||||    
T  19868114 gtttgtctaacatgtgcaatattgcacatgttaagacaactaaaagtagtaaattttcattgaaaaacaccaattatttatcaaaaagtta---tatatt 19868210  T
Q  132 taatataaaat 142  Q
    |||||||||||    
T  19868211 taatataaaat 19868221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 34270266 - 34270430
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||||||| || |||||||   ||||||||     || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  34270266 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaag----aagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 34270358  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  34270359 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 34270430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 9331962 - 9332130
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||| |||| ||| ||| | ||| |||||   |||||    
T  9331962 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaatta-ttgattaaatgttac---atatt 9332057  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||||||   |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  9332058 taatataaaaaacacaagtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatga 9332130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 23982933 - 23982764
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| ||||||||||||||||| | |||||||  ||||||||| || |||||||| ||| ||||  |||| ||| || ||||||| |||    |||||    
T  23982933 gtttgtctaacatgtgcaatattatacatgttaaggcaactaaaagtagtaacttttcattcaaaaccaacaattaattattaaaaactta---aatatt 23982837  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||||||||  |||| |  ||| ||||| |||| | ||| || |||||||| ||| |||||||| ||||||    
T  23982836 taatataaaatacacaagttccaagtcaaagttactactttaaatttcttaacgtgtgcaaatttgcacatga 23982764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 204
Target Start/End: Original strand, 33072072 - 33072150
Alignment:
Q  126 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||||||| ||||||| |||||  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  33072072 tatatttaatacaaaatgttcaaattccaatgcaaagttactattttaaatttcttaacatgtacaaatttgcacatga 33072150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 204
Target Start/End: Complemental strand, 36548636 - 36548469
Alignment:
Q  34 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatattt 132  Q
    ||||| |||||||||||||||| || |||||||   |||||||| || ||| |||||||||||||  |||| |||||  ||||| | ||||   ||||||    
T  36548636 tttgtctaacatgtgcaatattgcacatgttaagggaactaaaagtagtaattttttattgaaaaccaacaattattgattaaata-ttac---atattt 36548541  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||||||  |||||||   || ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  36548540 aatataaaaaatacaaattttaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatga 36548469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 186
Target Start/End: Complemental strand, 47708065 - 47707911
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaacta---aaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactat 128  Q
    |||||| || ||| |||||| ||||| |||||||||||||||   ||| ||| ||  |||||| |||||  |||| |||||| |||||||||||   |||    
T  47708065 gtttgtctatcatatgcaatgttacacatgttaaaacaactactaaaagtaacaagattttatggaaaaacaacaattatttattaaaaagtta---tat 47707969  T
Q  129 atttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacat 186  Q
    |||||||| |||||||| || |  ||||||||| |||| ||||| || ||||||||||    
T  47707968 atttaatacaaaatgtataagtttcaattcaaaattactattttaaacttcttaacat 47707911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 3530264 - 3530177
Alignment:
Q  60 atgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaat 150  Q
    |||||||| ||| ||| | |||||| ||||||||||||| |||| |||||| ||||||| |||   ||||||| |||||||||| ||||||    
T  3530264 atgttaaagcaattaagaataataattttttattgaaaacaacaattatttattaaaaaatta---tatatttgatataaaatgcacaaat 3530177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 204
Target Start/End: Complemental strand, 8091463 - 8091321
Alignment:
Q  60 atgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattc 158  Q
    |||| ||| ||||||||| ||  || |||||||||||||| || | |||||| |||||||||||   ||||||||| | |||||||| || |  |||| |    
T  8091463 atgtcaaagcaactaaaagtagcaaatttttattgaaaatcaataattatttattaaaaagtta---tatatttaacacaaaatgtaaaagttacaatgc 8091367  T
Q  159 aaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||| |||| ||||| || ||||||||||||  ||||||| ||||||    
T  8091366 aaagttactattttaaacttcttaacatgtgtaaatttgcacatga 8091321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 26050516 - 26050470
Alignment:
Q  158 caaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||||||||||| || |||||||||||| |||||||| ||||||    
T  26050516 caaatttaccattttaaatttcttaacatgtgcaaatttgcacatga 26050470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 26059875 - 26059829
Alignment:
Q  158 caaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||||||||||| || |||||||||||| |||||||| ||||||    
T  26059875 caaatttaccattttaaatttcttaacatgtgcaaatttgcacatga 26059829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 29398221 - 29398143
Alignment:
Q  126 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||||||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  29398221 tatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgaacatga 29398143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 24250314 - 24250379
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||    
T  24250314 gtttgtctaacatgtgcaatattgcacatgttaaggaaactaaaagtattaacttttcattgaaaa 24250379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 29398292 - 29398227
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||| |||| ||||||||    
T  29398292 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaataatactaatttttcattgaaaa 29398227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 122
Target Start/End: Original strand, 12650831 - 12650911
Alignment:
Q  43 catgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagtta 122  Q
    |||||||||||||  | |||||||  ||||||||| || |||||||| |||||||| || || |||||| |||||||||||    
T  12650831 catgtgcaatattgtacatgttaagccaactaaaaatagtaacttttcattgaaaactaccaattatttattaaaaagtta 12650911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 26682068 - 26682237
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataa-ctttttattgaaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || |||||||||||||||||| || |||  ||||||||||||| |||| |||||| |||||||| |||||   |||    
T  26682068 gtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaacaacaattatttattaaaaagctacac---att 26682164  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||||||||| |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  26682165 taatataaaatgcacaagttccaagtcaaagttactactttaaatttcttaacatgtgcaaatttgcacatga 26682237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 6818017 - 6818186
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| ||||||||||||||||  ||||||||||  |||||||| || |||||||  |||| |||| |||| |||||| ||||||||||    |||| |    
T  6818017 gtttgtctaacatgtgcaatattgtatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagtt---ttatagt 6818113  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||||||||| |||| |  | || ||| ||||| ||||| || |||||||||||| |||||||| ||||||    
T  6818114 taatataaaatgcacaagttccgatacaattttactattttaaacttcttaacatgtacaaatttgcacatga 6818186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 31812113 - 31812282
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || ||||||| | | |||||| || ||| ||||||||||||| ||| | |||||| |||||||| ||||   ||||    
T  31812113 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaataaaacttatttattaaaaagctaca---tatt 31812209  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| ||||| |||| |  ||| ||||| |||||||||| || ||||||| |||| |||||||| ||||||    
T  31812210 taatatgaaatgcacaagttccaagtcaaaattaccattttaaacttcttaatatgtgcaaatttgcacatga 31812282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 3306232 - 3306064
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || ||| ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  3306232 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 3306136  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
     ||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  3306135 gatacaaaatgttcaagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 3306064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 20514632 - 20514802
Alignment:
Q  33 gtttgtttaacatgtgcaa-tattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatat 130  Q
    |||||| |||||||||||| |||| || ||| |||| ||||| ||| || ||| || |||||||||| || || |||||| |||||||||||   |||||    
T  20514632 gtttgtctaacatgtgcaaatattgcacatggtaaagcaacttaaagtagtaatttcttattgaaaaataccaattatttattaaaaagtta---tatat 20514728  T
Q  131 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||||||||||||||| |  |||  |||| |||||||||| || |||||||| ||| ||||| || ||||||    
T  20514729 ttaatataaaatgtacaagttccaagacaaacttaccattttaaatttcttaacctgtgcaaatatgcacatga 20514802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 2161388 - 2161556
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  2161388 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 2161484  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||  ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  2161485 aattcaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 2161556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 7750668 - 7750733
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| |||||||||||||||| || |||||||||||||||||| ||  ||||||||||||||||    
T  7750668 gtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagcaactttttattgaaaa 7750733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 197
Target Start/End: Original strand, 12131983 - 12132145
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaata-acagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || ||||||||  |||||||| ||  ||||||||||||||||   |||  ||||| |||||||||||   ||||||    
T  12131983 gtttgtctaacatgtgcaacattgcacatgttaaagaaactaaaagtagcaactttttattgaaaaaccacaagtatttattaaaaagtta---tatatt 12132079  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 197  Q
    ||||||||||||| ||| |  |||| |||| |||| | ||| || |||||||||||| ||| ||||    
T  12132080 taatataaaatgttcaagttccaatacaaacttactactttaaatttcttaacatgtgcaagtttg 12132145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 9580287 - 9580118
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| ||| |||||||| ||| || |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || ||||   | | ||||||    
T  9580287 gtttgtctaatatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaa---aaattatatt 9580191  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || ||||||||||||  ||||||| ||||||    
T  9580190 taatattaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacatgtgtaaatttgcacatga 9580118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 14816303 - 14816198
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||||||||||||  |||| ||| || ||||||| ||||   |||||    
T  14816303 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttac---atatt 14816207  T
Q  132 taatataaa 140  Q
    |||||||||    
T  14816206 taatataaa 14816198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 14829437 - 14829542
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||||||||||||  |||| ||| || ||||||| ||||   |||||    
T  14829437 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttac---atatt 14829533  T
Q  132 taatataaa 140  Q
    |||||||||    
T  14829534 taatataaa 14829542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 148
Target Start/End: Original strand, 38843704 - 38843817
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  38843704 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 38843800  T
Q  132 taatataaaatgtacaa 148  Q
    |||||| ||||||||||    
T  38843801 taatattaaatgtacaa 38843817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 11923015 - 11923080
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| |||||||||||||||| || | |||||||||||| ||| | ||||||||||||||||||    
T  11923015 gtttgtctaacatgtgcaatattgcacaagttaaaacaactgaaaatgataactttttattgaaaa 11923080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 38527821 - 38527886
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| |||||||||||||||| || |||||||  ||||||||| ||||||||||| ||||||||    
T  38527821 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaa 38527886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 204
Target Start/End: Complemental strand, 39024998 - 39024866
Alignment:
Q  69 caactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttacca 168  Q
    ||||||||| |||||||||||||||||||  |||| ||| || |||||||  ||||   || ||||||||||||| ||||||  ||| ||||| |||| |    
T  39024998 caactaaaagtaataactttttattgaaaccaacaattaattattaaaaatctaca---tagttaatataaaatgcacaaattccaagtcaaagttacta 39024902  T
Q  169 ttttgaaattcttaacatgttcaaatttgtacatga 204  Q
     ||| || |||||| ||||| |||||||| ||||||    
T  39024901 ctttaaacttcttatcatgtgcaaatttgcacatga 39024866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 12189766 - 12189597
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgtt-aaaaagttacactatat 130  Q
    ||||||||||||||||||  ||| || |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || ||||| ||    |||||    
T  12189766 gtttgtttaacatgtgcagcattgcacatgttaaaacaactaagagtattaactttttcttgaaaaacaacaattatttattcaaaaaatt----tatat 12189671  T
Q  131 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||| |||||||||| |  ||||  ||| || | ||||| || |||||| ||||| |||||||| ||||||    
T  12189670 ttaatattaaatgtacaagttccaatataaagtttctattttaaacttcttatcatgtgcaaatttgcacatga 12189597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 12434194 - 12434025
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgtt-aaaaagttacactatat 130  Q
    ||||||||||||||||||  ||| || |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || ||||| ||    |||||    
T  12434194 gtttgtttaacatgtgcagcattgcacatgttaaaacaactaagagtattaactttttcttgaaaaacaacaattatttattcaaaaaatt----tatat 12434099  T
Q  131 ttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||| |||||||||| |  ||||  ||| || | ||||| || |||||| ||||| |||||||| ||||||    
T  12434098 ttaatattaaatgtacaagttccaatataaagtttctattttaaacttcttatcatgtgcaaatttgcacatga 12434025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 148
Target Start/End: Complemental strand, 34741813 - 34741730
Alignment:
Q  62 gttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaa 148  Q
    |||||||||||||||| ||| ||||||| |||||||| || | |||||| ||||||| |||   |||||||||||||||||| ||||    
T  34741813 gttaaaacaactaaaaataacaacttttaattgaaaacaataattatttattaaaaaatta---tatatttaatataaaatgcacaa 34741730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 8284747 - 8284660
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaag 119  Q
    |||||| ||||||||||| |||| || |||||||| ||||||||| || ||||||||||||  |||| |||| |||||| ||||||||    
T  8284747 gtttgtctaacatgtgcagtattgcacatgttaaagcaactaaaagtagtaactttttattaaaaaagaacaattatttattaaaaag 8284660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 197
Target Start/End: Original strand, 45005970 - 45006131
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  45005970 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 45006066  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 197  Q
    |||||| | |||||||  |  |||| |||| || | ||||| || |||||||||||| ||||||||    
T  45006067 taatattagatgtacatgttccaatacaaaatt-ctattttaaacttcttaacatgtgcaaatttg 45006131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 41 - 118
Target Start/End: Original strand, 5298077 - 5298157
Alignment:
Q  41 aacatgtgcaatattacatatgttaaaacaactaaaattaataa---ctttttattgaaaataacagttatttgttaaaaa 118  Q
    |||||||||||||||||| |||||||||| ||||||| ||| ||    ||||||||||||| |||| |||||| |||||||    
T  5298077 aacatgtgcaatattacacatgttaaaactactaaaactaacaaattttttttattgaaaacaacaattatttattaaaaa 5298157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 13328118 - 13327950
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| ||||||||||   |||||||| || |||||||| ||||||||  |||| ||| ||| | ||| |||||   |||||    
T  13328118 gtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaatta-ttgattaaatgttac---atatt 13328023  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||||||   |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  13328022 taatataaaaaacacaagtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaatttgcacatga 13327950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 35678452 - 35678347
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||| ||||||||  |||| ||| || ||||||| ||||   |||||    
T  35678452 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttac---atatt 35678356  T
Q  132 taatataaa 140  Q
    |||||||||    
T  35678355 taatataaa 35678347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 36967248 - 36967079
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| |||  | ||||||| |||||||| | || ||||||||| ||| |||| |||| |||| | || |||||||    ||||||    
T  36967248 gtttgtctaacatgtgcaacattgtacatgttaagacaactaatagtagtaactttttcttggaaaacaacaattatatattcaaaagttt---tatatt 36967152  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| |||||| ||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  36967151 taatattaaatgtgcaagtttcaatacaaagtttctattttaaacttcttaacatgtgcaaatttgcacatga 36967079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 7140636 - 7140571
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||||||||||||    
T  7140636 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaa 7140571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 9824959 - 9825024
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| |||||| |||||||||  |||||||||  ||| |||||||| |||||||||||||||||    
T  9824959 gtttgtctaacatatgcaatattgtatatgttaatgcaattaaaattagtaactttttattgaaaa 9825024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 147
Target Start/End: Complemental strand, 16445893 - 16445801
Alignment:
Q  53 attacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtaca 147  Q
    ||||||||||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    |||||||||||| |||||||||    
T  16445893 attacatatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatttaatattaaatgtaca 16445801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 40210998 - 40210933
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| |||||||||||||||| ||||||||||   |||||||| || |||||||| ||||||||    
T  40210998 gtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtattaacttttcattgaaaa 40210933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 11947076 - 11947016
Alignment:
Q  34 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg 94  Q
    ||||| |||||||| ||||||| || | |||||||||||||||| | ||||||||||||||    
T  11947076 tttgtctaacatgtacaatattgcacaagttaaaacaactaaaaatgataactttttattg 11947016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 141
Target Start/End: Original strand, 9743862 - 9743967
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| ||||||||||||||||    ||||||| |||||||||| || ||| |||||||||||||  |||| |||||| || |||||||||   |||||    
T  9743862 gtttgtctaacatgtgcaatattgtgcatgttaagacaactaaaagtagtaattttttattgaaaaccaacaattatttatt-aaaagttac---atatt 9743957  T
Q  132 taatataaaa 141  Q
    ||||||||||    
T  9743958 taatataaaa 9743967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 10974725 - 10974619
Alignment:
Q  40 taacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatttaatata 138  Q
    |||||| |||| ||||  |||||||||| ||||||||| || |||| ||||||||||||  || |  ||||| ||||||| |||||   |||||||||||    
T  10974725 taacatatgcactattgtatatgttaaagcaactaaaagtagtaacattttattgaaaaacaataactatttattaaaaaattaca---tatttaatata 10974629  T
Q  139 aaatgtacaa 148  Q
    ||||||||||    
T  10974628 aaatgtacaa 10974619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 204
Target Start/End: Complemental strand, 28015032 - 28014867
Alignment:
Q  35 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaa 134  Q
    |||| ||||||||||||| ||||| | ||||||| |||| |    | ||||||||| || |||| |||| |||||| || |||||||    |||||||||    
T  28015032 ttgtctaacatgtgcaatgttacacaagttaaaataacttattgcagtaactttttttt-aaaacaacaattatttattcaaaagttt---tatatttaa 28014937  T
Q  135 tataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  28014936 tattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 28014867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 2083156 - 2083078
Alignment:
Q  126 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||||||||||||||| ||||||  |||| |||||||   |||||||| ||||||| ||||  ||||||| ||||||    
T  2083156 tatatttaatataaaatgaacaaatttcaatacaaatttgttattttgaacttcttaagatgtgtaaatttgcacatga 2083078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 11117175 - 11117129
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaatt 79  Q
    |||||| |||||||||||||||| || |||||||| |||||||||||    
T  11117175 gtttgtctaacatgtgcaatattgcacatgttaaagcaactaaaatt 11117129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 26834561 - 26834730
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||| ||||| ||| || ||| ||| | | |||||| || ||| |||||||||||||  || | |||||| |||||||| ||||   ||||    
T  26834561 gtttgtctaacatatgcaacattgcacatgctaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctaca---tatt 26834657  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| ||||| |||| |  ||| ||||| |||||||||| || ||||||| || | |||||||| ||||||    
T  26834658 taatatgaaatgcacaagttccaagtcaaaattaccattttaaatttcttaatatatgcaaatttgcacatga 26834730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 144
Target Start/End: Original strand, 32186186 - 32186295
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||||||||||| |||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||| | || |||||||    ||||||    
T  32186186 gtttgtttaacatgagcaacattgcaaatgttaaaacaactaatagtagtaactttttcttagaaaacaacatttatatattcaaaagtt---ttatatt 32186282  T
Q  132 taatataaaatgt 144  Q
    |||||| ||||||    
T  32186283 taatattaaatgt 32186295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 37523756 - 37523806
Alignment:
Q  31 ttgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaa 81  Q
    |||||||| |||||||| ||||||| || ||||||||||| ||||||||||    
T  37523756 ttgtttgtctaacatgtacaatattgcacatgttaaaacagctaaaattaa 37523806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 38213123 - 38213081
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaa 75  Q
    ||||||||||||||||||| ||| || ||||||||||||||||    
T  38213123 gtttgtttaacatgtgcaacattgcacatgttaaaacaactaa 38213081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 44091346 - 44091404
Alignment:
Q  60 atgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 118  Q
    ||||||||||||| |||| || ||| ||||||||||||| |||| |||||| |||||||    
T  44091346 atgttaaaacaacgaaaagtattaattttttattgaaaacaacaattatttattaaaaa 44091404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 10129104 - 10129169
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| |||||||||||||||| || |||||||   ||||||||||| ||| |||| ||||||||    
T  10129104 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaattagtaatttttcattgaaaa 10129169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 12346006 - 12346071
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| | |||||||||| |||||| |||||||||||| ||| | || ||||||||| |||||||    
T  12346006 gtttgtctgacatgtgcaacattacacatgttaaaacaattaatagtagtaactttttcttgaaaa 12346071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 45516316 - 45516373
Alignment:
Q  60 atgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaa 117  Q
    ||||||| | |||||||| || |||||||||||||||| ||||| |||||| ||||||    
T  45516316 atgttaagataactaaaagtagtaactttttattgaaactaacaattatttattaaaa 45516373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 201
Target Start/End: Complemental strand, 1844731 - 1844572
Alignment:
Q  41 aacatgtgcaatattacatatgttaaaacaactaaaattaataactt-tttattgaaaa-taacagttatttgttaaaaagttacactatatttaatata 138  Q
    ||||||| ||||||| || | ||| |||||||||||| ||  || || |||||| |||| ||||| |||||| ||||||||||| |   |||||||||||    
T  1844731 aacatgtacaatattgcacacgttgaaacaactaaaagtagaaatttctttattaaaaagtaacaattatttattaaaaagttaaa---tatttaatata 1844635  T
Q  139 aaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtaca 201  Q
    ||||  | ||||  | || ||||||||  |||||||| ||||||||||||  ||| |||||||    
T  1844634 aaatacataaatttcgatacaaatttattattttgaatttcttaacatgtgtaaacttgtaca 1844572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 35583368 - 35583453
Alignment:
Q  35 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttt---tattgaaaataacagttatttgttaaaaa 118  Q
    |||| |||||||| ||||||| || |||||||||||  |||||| || |||||||   ||||||||| |||| ||||||||||||||    
T  35583368 ttgtctaacatgtacaatattgcacatgttaaaacatttaaaat-aacaacttttatttattgaaaacaacaattatttgttaaaaa 35583453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 40568314 - 40568378
Alignment:
Q  34 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    ||||| |||||  ||||||||| || |||||||||||||||||| |  |||||||||||| ||||    
T  40568314 tttgtctaacacatgcaatatttcacatgttaaaacaactaaaagttgtaactttttattaaaaa 40568378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 203
Target Start/End: Complemental strand, 15411800 - 15411632
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || ||| ||||||||| |||| |||| | |||| |||||||| |||   |||||    
T  15411800 gtttgtctaacatgtgcaatattgcacatgttaaagtaactaaaagtagtaattttttattgaaaaacaacaataatttattaaaaagctac---atatt 15411704  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatg 203  Q
    |||||||||||| |||| |  |||  |||| |||| ||||| || |||||||||||| |||||||| |||||    
T  15411703 taatataaaatgaacaagtttcaagacaaagttactattttaaacttcttaacatgtgcaaatttgcacatg 15411632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 9747317 - 9747486
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||| |||| ||||||||  |||||||| || ||||| ||||||| |||| ||||  ||||||| |||||| |||   |||||    
T  9747317 gtttgtctaacatgtgcaatagtacacatgttaaattaactaaaagtagtaactatttattgaaaaacaacaactatttgtaaaaaagctac---atatt 9747413  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||||||||| |||| |  |||  |||| |||| ||||| || ||||||||||||  ||||||| ||||||    
T  9747414 taatataaaatgaacaagttccaagacaaaattactattttaaacttcttaacatgtgaaaatttgcacatga 9747486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 197
Target Start/End: Complemental strand, 5583735 - 5583574
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  5583735 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 5583639  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 197  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| ||||||||    
T  5583638 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttg 5583574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 14377425 - 14377593
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| ||||| |||||||||| || |||||||  ||||||||| || |||||||||||||||||  |||| ||||||||| |||||||||   |||||    
T  14377425 gtttgtctaacacgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaaaccaacaattatttgtt-aaaagttac---atatt 14377520  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||||||   |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  14377521 taatataaaaaacacaagtttcaagtcaaagttactactttaaacttcttatcatgtacaaatttgcacatga 14377593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 12438825 - 12438740
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 118  Q
    |||||| |||||||||||||||| |||||||| | |||||||||| ||||||||||| ||| |||  |||| |||||| |||||||    
T  12438825 gtttgtataacatgtgcaatattgcatatgttcagacaactaaaaataataacttttcattaaaaccaacaattatttattaaaaa 12438740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 204
Target Start/End: Original strand, 45062207 - 45062367
Alignment:
Q  42 acatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatttaatataaa 140  Q
    |||||| |||||||| |||||||||||||| ||||| |  ||||||||||||  |||| || | |||||| ||||||||||||   || |||||||||||    
T  45062207 acatgtacaatattaaatatgttaaaacaattaaaagtggtaactttttattaaaaaacaaaaattatttattaaaaagttac---atgtttaatataaa 45062303  T
Q  141 atgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||| |||| |  |||   ||| |||| |||||||| ||||||| |||| |||||||| ||||||    
T  45062304 atgcacaagttccaaaataaagttactattttgaacttcttaatatgtgcaaatttgcacatga 45062367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 23932565 - 23932734
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||  |||| |||| |||| |||||| ||||||||||    |||| |    
T  23932565 gtttgtctaacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagtt---ttatagt 23932661  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||||||||| |||| |  | || ||| ||||| ||||| || ||||||| || | |||||||| ||||||    
T  23932662 taatataaaatgcacaagttccgatacaattttactattttaaacttcttaatatatgcaaatttgcacatga 23932734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 27665221 - 27665053
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || |||||||  ||||||||| || |||||||| ||||||||  |||| |||||| || |||||||||   |||||    
T  27665221 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttac---atatt 27665126  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||||||   |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  27665125 taatataaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 27665053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 43806360 - 43806521
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || |||||||||||| ||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  43806360 gtttgtctaacatgtgcaacattgcacatgttaaaacaattaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 43806456  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 196  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || || ||||||||| |||||||    
T  43806457 taatattaaatgtacaagtttcaatacaaaatttctattttaaactttttaacatgtgcaaattt 43806521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 204
Target Start/End: Complemental strand, 24729718 - 24729586
Alignment:
Q  70 aactaaaattaataactttttattgaaaataac-agttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttacca 168  Q
    |||||||| || ||| ||||||||||||||||  | |||||| |||||||||||   | || |||||| ||||| |||||||  |||| |||| |||| |    
T  24729718 aactaaaaatagtaaatttttattgaaaataaataattatttattaaaaagtta---tgtaattaatacaaaatatacaaattccaatgcaaagttacta 24729622  T
Q  169 ttttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||| || |||||||||||| |||||||| ||||||    
T  24729621 ttttaaatttcttaacatgtgcaaatttgcacatga 24729586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 197
Target Start/End: Complemental strand, 34214129 - 34213965
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| ||||||||  |||| | || |||||||| ||||||||| || ||| |||||||||||||  |||| ||||||  |||||||||| | ||| ||    
T  34214129 gtttgtctaacatgtataatactgcacatgttaaagcaactaaaaatagtaagtttttattgaaaaccaacaattattttataaaaagttata-tatttt 34214031  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 197  Q
    ||||| ||||||| ||| |  ||||  ||| |||| ||||| || |||||||||||| ||||||||    
T  34214030 taataaaaaatgttcaagttccaatgaaaaattactattttaaatttcttaacatgtgcaaatttg 34213965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 141
Target Start/End: Original strand, 34817544 - 34817649
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||| ||||||||| ||  | |||||| |||||||| ||  |||| ||||||||||| |||| |||||| |||||||||||   |||||||    
T  34817544 gtttgtctaacatatgcaatattgcacgtattaaaataactaaaaatatcaactatttattgaaaacaacaattatttattaaaaagtta---tatattt 34817640  T
Q  133 aatataaaa 141  Q
    |||| ||||    
T  34817641 aataaaaaa 34817649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 39367059 - 39367149
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagtta 122  Q
    |||||| |||||||| ||  ||||| ||||||||| ||||||||||||| ||  ||||||||||||| || | |||||| |||||||||||    
T  39367059 gtttgtctaacatgtacaccattacgtatgttaaagcaactaaaattaacaaaattttattgaaaatcaataattatttattaaaaagtta 39367149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 7757963 - 7757795
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||| |||  | |||||||   |||||||| ||| || |||||||| |||  |||| ||||||   |||||||||   |||||||    
T  7757963 gtttgtctaacatgtgcaaaattgtacatgttaaggtaactaaaagtaacaagtttttattaaaaccaacaattatttaacaaaaagtta---tatattt 7757867  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || ||||||||||||  ||||||| ||||||    
T  7757866 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgtaaatttgcacatga 7757795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 12016667 - 12016732
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||||||||||||    
T  12016667 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaa 12016732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 188
Target Start/End: Complemental strand, 2580082 - 2579983
Alignment:
Q  86 tttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaaca 185  Q
    |||||||| ||||||||| |||||||||||||| ||   | |||||||| ||||||| ||||||   |||| |||| |||| | |||||| |||||||||    
T  2580082 tttttattaaaaataacaattatttgttaaaaaatt---caatatttaacataaaatatacaaaattcaatacaaacttactagtttgaacttcttaaca 2579986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 7720116 - 7720180
Alignment:
Q  34 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    ||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| |||||||    
T  7720116 tttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttgaaaa 7720180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 204
Target Start/End: Complemental strand, 26003431 - 26003355
Alignment:
Q  128 tatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||||||| ||||||||||||  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  26003431 tatttaatatcaaatgtacaaatttcaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 26003355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 2051639 - 2051721
Alignment:
Q  58 atatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatttaatataaaat 142  Q
    |||||||||||||||||||||||  || ||||||||| |||| |||| |||||| ||||||| |||    ||||||||||||||||    
T  2051639 atatgttaaaacaactaaaattagcaagtttttattgaaaaacaacaattatttattaaaaattta---aatatttaatataaaat 2051721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 43388944 - 43388857
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaag 119  Q
    |||||| ||| |||||||||||| || || ||||| ||||||||| ||  || |||||||||||||| |||| |||||| ||||||||    
T  43388944 gtttgtctaatatgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattatttattaaaaag 43388857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 19228426 - 19228594
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||  |||| ||| ||| | |||||||||   |||||    
T  19228426 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaatta-ttgattaaaagttac---atatt 19228521  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||| ||||   |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  19228522 taatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatga 19228594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 36612909 - 36612796
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| |  ||||||||| |||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  36612909 gtttgtctaacatgtgcaacattgctcatgttaaaataactaatagtagtaacttttttttggaaaacaacatttatttattcaaaagtt---ttatatt 36612813  T
Q  132 taatataaaatgtacaa 148  Q
    |||||| ||||||||||    
T  36612812 taatattaaatgtacaa 36612796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 148
Target Start/End: Complemental strand, 36620760 - 36620647
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| |  ||||||||| |||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  36620760 gtttgtctaacatgtgcaacattgctcatgttaaaataactaatagtagtaacttttttttggaaaacaacatttatttattcaaaagtt---ttatatt 36620664  T
Q  132 taatataaaatgtacaa 148  Q
    |||||| ||||||||||    
T  36620663 taatattaaatgtacaa 36620647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 36909553 - 36909503
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaata 83  Q
    |||||| |||||| |||||||||||| |||||||||||| ||||| |||||    
T  36909553 gtttgtctaacatatgcaatattacacatgttaaaacaattaaaagtaata 36909503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 39904225 - 39904159
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 99  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| |||||||||    
T  39904225 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaat 39904159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 4579966 - 4579901
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| ||||||||||||||||||| |||||||   |||||||  || |||||||| ||||||||    
T  4579966 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatatagtaacttttcattgaaaa 4579901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 16754971 - 16755028
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataacttttt 90  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || |||||||||    
T  16754971 gtttgtctaacatgtgcaacattgcaaatgttaaaacaactaatagtagtaacttttt 16755028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 16919331 - 16919266
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || ||||||||| |||||||    
T  16919331 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaa 16919266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 22705455 - 22705520
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||    
T  22705455 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 22705520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 26003669 - 26003612
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataacttttt 90  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || |||||||||    
T  26003669 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttt 26003612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 124
Target Start/End: Complemental strand, 25998172 - 25998088
Alignment:
Q  41 aacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttaca 124  Q
    |||||||||| |||| || ||||||||  |||||||| | | |||||||||||| |||| |||| |||||| |||||||| ||||    
T  25998172 aacatgtgcattattgcacatgttaaagtaactaaaagtgaaaactttttattgaaaaacaacaattatttattaaaaagataca 25998088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 203
Target Start/End: Complemental strand, 26230030 - 26229864
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || ||| |||||||| |||  |||| ||| ||| | |||||||||   ||||||    
T  26230030 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaattttttattaaaaccaacaatta-ttgattaaaagttac---atattt 26229935  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatg 203  Q
    |||||||||  || ||||   || ||||| |||| ||||| || |||||||| ||  |||||||| |||||    
T  26229934 aatataaaaaatataaattttaagtcaaagttactattttaaacttcttaacctggacaaatttgcacatg 26229864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 6016856 - 6017025
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || ||| ||| ||| |||||| || |||||||| ||||||||  |||| |||||| |||||||||||   ||||||    
T  6016856 gtttgtctaacatgtgcaacattgcacatggtaagacatctaaaagtagtaacttttcattgaaaaacaacacttattttttaaaaagtta---tatatt 6016952  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| ||||| |||| |  ||| ||||| |||||| ||| || || ||||||||| |||||||| ||||||    
T  6016953 taatatgaaatgcacaagttccaagtcaaagttaccactttaaactttttaacatgtgcaaatttgcacatga 6017025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 186
Target Start/End: Original strand, 30623326 - 30623477
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| |||||| |||||||||||||||| | || ||||||||| ||| |||| |||| |||||| || |||||||    ||||||    
T  30623326 gtttgtctaacatgtgcaacattacacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaagtt---ttatatt 30623422  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacat 186  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || ||||||||||    
T  30623423 taatatcaaatgtacaagtttcaatacaaaatttctattttaaacttcttaacat 30623477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 8977644 - 8977483
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  ||| ||| ||||||||  |||| | |||| || ||||||||||   ||||    
T  8977644 gtttgtctaacatgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttaca---tatt 8977548  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 196  Q
    |||||||||||| |||| |  |||| ||||||||| |||||||| ||||||||| || |||||||    
T  8977547 taatataaaatgcacaagttacaatacaaatttactattttgaacttcttaacaagtgcaaattt 8977483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 34692354 - 34692523
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| ||| ||||  | | |||||| || |||||||    ||||||    
T  34692354 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttt---tatatt 34692450  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  34692451 taatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 34692523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 14228303 - 14228135
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||||||| || |||||||   || ||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  14228303 gtttgtctaacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 14228207  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  14228206 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 14228135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 28943946 - 28943778
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||||||| || |||||||   || ||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  28943946 gtttgtctaacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 28943850  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  28943849 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 28943778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 29730295 - 29730383
Alignment:
Q  50 aatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatttaatataaa 140  Q
    |||||| ||||||||||| | | |||||||||||| ||||||||| |||| ||||||||||| |||||||||||   |||||||||||||||    
T  29730295 aatattgcatatgttaaagctattaaaattaataagtttttattgaaaaacaacagttatttattaaaaagtta---tatatttaatataaa 29730383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 204
Target Start/End: Original strand, 10887031 - 10887198
Alignment:
Q  35 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatattta 133  Q
    |||| |||||||||||| ||| || ||||||| | | |||||| || ||| |||||||||||||  || | |||||| |||||||| ||||   ||||||    
T  10887031 ttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctaca---tattta 10887127  T
Q  134 atataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||||||  |||| |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  10887128 atataaaatacacaagttccaaatcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatga 10887198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 202
Target Start/End: Original strand, 33017725 - 33017891
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||||||| || |||||||   |||||||||||  || |||||||| |||  |||| ||||||   |||||||||   |||||||    
T  33017725 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaattagcaagtttttattaaaaccaacaattatttaacaaaaagtta---tatattt 33017821  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 202  Q
    |||| ||||||| ||| |  | || |||| |||| ||||| || || ||||||||| |||||||| ||||    
T  33017822 aatacaaaatgttcaagttcctatgcaaagttactattttaaattttttaacatgtgcaaatttgcacat 33017891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 188
Target Start/End: Complemental strand, 1017956 - 1017803
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||| | || ||| | ||| |||||||| || ||||||||  |||||||  |||| |||||| ||||||| |||||   ||||    
T  1017956 gtttgtctaacatgtgcaatactgcacatgattaaataactaaaagtagtaacttttcgttgaaaaccaacaattatttattaaaaatttaca---tatt 1017860  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgt 188  Q
    |||||||||||| |||| |  ||| ||||| |||| | ||| || ||||||||||||    
T  1017859 taatataaaatgcacaactttcaagtcaaagttactactttaaacttcttaacatgt 1017803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 29863480 - 29863311
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||  |||| |||| || | |||||| ||||||||||    |||| |    
T  29863480 gtttgtctaacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaataattatttattaaaaagtt---ttatagt 29863384  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||||||||| | || |  | |  ||| ||||| ||||| || |||||||||||| |||||||| ||||||    
T  29863383 taatataaaatgcaaaagttccgacacaattttactattttaaacttcttaacatgtgcaaatttgcacatga 29863311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 1814959 - 1814894
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| |||||||||||||||| || |||||||| ||||||||| ||| |  |||||||||||||    
T  1814959 gtttgtctaacatgtgcaatattgcacatgttaaagcaactaaaagtaacatatttttattgaaaa 1814894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 3485776 - 3485711
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| |||||| || ||||||||||||||||||  |||||||||||  | ||||||||||||||    
T  3485776 gtttgtctaacatatgtaatattacatatgttaaaggaactaaaattagcacctttttattgaaaa 3485711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 17552764 - 17552596
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||| ||||  |||| ||||||   ||||| |||   |||||||    
T  17552764 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttatcgaaaccaacaattatttaacaaaaaatta---tatattt 17552668  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||| ||||||| ||| |  |||| || | |||| ||||| || |||||||||||| |||||||| ||||||    
T  17552667 aatacaaaatgttcaagttccaatgcataattactattttaaatttcttaacatgtgcaaatttgcacatga 17552596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 24979327 - 24979262
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| |||||||    
T  24979327 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaataatagtaactttttcttgaaaa 24979262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 17596315 - 17596370
Alignment:
Q  35 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataacttttt 90  Q
    |||| |||||||||||||||| || ||||||| |||||||||| || |||||||||    
T  17596315 ttgtctaacatgtgcaatattgcacatgttaagacaactaaaagtagtaacttttt 17596370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 18332866 - 18332697
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || ||||||| | | |||||| || ||| ||||||||| |||| || | |||||| |||||||| ||   ||||||    
T  18332866 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagcta---tatatt 18332770  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| ||||| | || |  ||| ||||| ||| || ||| || ||||||||||||  ||||||| ||||||    
T  18332769 taatatgaaatgcataagttccaagtcaaaattatcactttaaacttcttaacatgtgaaaatttgcacatga 18332697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 5363070 - 5363005
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||    
T  5363070 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 5363005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 30839782 - 30839950
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  30839782 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 30839878  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  30839879 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 30839950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 36597580 - 36597748
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  36597580 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattgaaaccaacaattatttaacaaaaagtta---tatattt 36597676  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  36597677 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 36597748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 204
Target Start/End: Complemental strand, 8103755 - 8103589
Alignment:
Q  35 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaa 134  Q
    |||| |||||||||||||||| || |||||||  ||||||||| || ||||||||||||||||  |||| ||| || |||||||  |||   ||| ||||    
T  8103755 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaaccaacaattaattattaaaaatctac---ataattaa 8103659  T
Q  135 tataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||||| |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  8103658 tataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 8103589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 197
Target Start/End: Complemental strand, 18841883 - 18841721
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  18841883 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttggaaaacaacaattatttattcaaaagtt---ttatatt 18841787  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 197  Q
    |||||| ||||||||||||  |||| |||| || | ||||| || || ||||||| | ||||||||    
T  18841786 taatattaaatgtacaaatttcaatacaaaatttctattttaaactttttaacatatgcaaatttg 18841721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 3398220 - 3398389
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| ||| ||||  | | |||||| || |||||||    ||||||    
T  3398220 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagttt---tatatt 3398316  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  3398317 taatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 3398389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 40512952 - 40513120
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||||||| || |||||||   ||||| || || ||| ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  40512952 gtttgtctaacatgtgcaatattgcacatgttaaggtaactagaagtagtaagtttttattgaaatcaacaattatttaacaaaaagtta---tatattt 40513048  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
     ||| ||||| | |||||  |||| |||| |||| ||||| || || ||||||||| |||||||||||||||    
T  40513049 gatacaaaatattcaaattccaatgcaaagttactattttaaattttttaacatgtgcaaatttgtacatga 40513120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 140
Target Start/End: Complemental strand, 5958301 - 5958196
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 131  Q
    |||||| ||||||||||||||||||| ||||||||  |||||||| || ||| |||| ||||||||| |||| ||| || ||||||| ||||   |||||    
T  5958301 gtttgtctaacatgtgcaatattacacatgttaaagaaactaaaagtagtaatttttcattgaaaatcaacaattaattattaaaaatttac---atatt 5958205  T
Q  132 taatataaa 140  Q
    |||||||||    
T  5958204 taatataaa 5958196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 11636732 - 11636900
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || ||||||||  |||||||| || |||||||| ||||||||  |||| ||| || ||||||| ||||   |||||    
T  11636732 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttac---atatt 11636828  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| ||||| |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  11636829 taatat-aaatgcacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 11636900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 204
Target Start/End: Complemental strand, 15241065 - 15240959
Alignment:
Q  95 aaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 194  Q
    |||| |||| |||||| ||||||| |||   |||||||||||||| ||| ||||||  |||| ||||||||  |||||||| || ||||||||| |||||    
T  15241065 aaaacaacaattatttattaaaaaatta---tatatttaatataacatgcacaaatttcaatacaaatttaatattttgaactttttaacatgtacaaat 15240969  T
Q  195 ttgtacatga 204  Q
    ||| ||||||    
T  15240968 ttgcacatga 15240959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 122
Target Start/End: Complemental strand, 10665134 - 10665053
Alignment:
Q  41 aacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagtta 122  Q
    |||||||| |||||| || |||||||   |||||||| ||||||||||| ||||||||||  | |||||| |||||||||||    
T  10665134 aacatgtgtaatattgcacatgttaaggtaactaaaagtaataacttttcattgaaaatattaattatttattaaaaagtta 10665053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 11360186 - 11360243
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataacttttt 90  Q
    |||| |||||||||| |||||||||| |||||||||||||||||| || ||| |||||    
T  11360186 gtttatttaacatgttcaatattacacatgttaaaacaactaaaagtagtaatttttt 11360243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 11250134 - 11250090
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaa 77  Q
    ||||||||||||||||||||||| || |||||||| |||||||||    
T  11250134 gtttgtttaacatgtgcaatattgcacatgttaaagcaactaaaa 11250090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 28629890 - 28629984
Alignment:
Q  44 atgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatttaatataaaa 141  Q
    |||| ||||||| || |||||||| ||||||||| ||||||||||| ||||||||  |||| |||||| || |||||||||   |||||||||||||||    
T  28629890 atgtacaatattgcacatgttaaagcaactaaaaataataacttttcattgaaaaccaacaattatttatt-aaaagttac---atatttaatataaaa 28629984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 33072677 - 33072721
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaa 77  Q
    ||||||||||||||||||||||| || |||||||| |||||||||    
T  33072677 gtttgtttaacatgtgcaatattgcacatgttaaatcaactaaaa 33072721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 2795524 - 2795692
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||  |||| ||| ||| | |||||||||   |||||    
T  2795524 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaatta-ttgattaaaagttac---atatt 2795619  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||| ||||   |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  2795620 taatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatga 2795692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 11375972 - 11376026
Alignment:
Q  45 tgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 99  Q
    ||||||||||| || |||||||| ||||||||| || |||||||| |||||||||    
T  11375972 tgtgcaatattgcacatgttaaagcaactaaaagtagtaacttttcattgaaaat 11376026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 15820317 - 15820379
Alignment:
Q  126 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgt 188  Q
    ||||||||||| ||||||| |||||  |||| ||||||||| |||||||| ||||| ||||||    
T  15820317 tatatttaatagaaaatgttcaaatttcaatacaaatttactattttgaatttcttgacatgt 15820379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 202
Target Start/End: Complemental strand, 23995516 - 23995427
Alignment:
Q  112 ttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 202  Q
    ||||||||||| | ||||||||||| ||||||||||| |  ||||  ||| |||| ||||| || |||||||||||| |||||||| ||||    
T  23995516 ttaaaaagttata-tatatttaatacaaaatgtacaagtttcaatataaaattactattttaaacttcttaacatgtacaaatttgcacat 23995427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 31567577 - 31567507
Alignment:
Q  127 atatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttg 197  Q
    ||||||||||||||||| ||||||  |||  |||| |||||||||| || || ||||||||| ||||||||    
T  31567577 atatttaatataaaatgaacaaatttcaagacaaaattaccattttaaattttttaacatgtgcaaatttg 31567507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 34578012 - 34578078
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat 99  Q
    |||||| |||||||||||||||| || |||||||   |||||||| |||||| |||| |||||||||    
T  34578012 gtttgtctaacatgtgcaatattccacatgttaaggtaactaaaagtaataatttttcattgaaaat 34578078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 143
Target Start/End: Complemental strand, 40309580 - 40309497
Alignment:
Q  60 atgttaaaacaactaaaattaataactttttattg---aaaataacagttatttgttaaaaagttacactatatttaatataaaatg 143  Q
    |||||||||||||||||| ||| ||  ||||||||   ||||||||| | |||| |||||||||||   ||||||||||||||||||    
T  40309580 atgttaaaacaactaaaagtaacaatattttattgaaaaaaataacaataatttattaaaaagtta---tatatttaatataaaatg 40309497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 24014865 - 24014800
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| |||||||||||| ||| || |||||||||||||||||| ||  || |||||||| ||||    
T  24014865 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaaaagtataaagtttttattcaaaa 24014800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 204
Target Start/End: Original strand, 6863610 - 6863725
Alignment:
Q  86 tttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaaca 185  Q
    ||||||||||||  |||| ||||||  ||||||||||   ||||||||||| ||||||| ||| |  ||||  ||| |||| ||||| || || ||||||    
T  6863610 tttttattgaaaccaacaattatttaataaaaagtta---tatatttaatacaaaatgttcaagttccaatataaagttactattttaaattttttaaca 6863706  T
Q  186 tgttcaaatttgtacatga 204  Q
    ||| |||||||| ||||||    
T  6863707 tgtgcaaatttgcacatga 6863725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 7162934 - 7163010
Alignment:
Q  128 tatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||||||||||||| |||| |  ||||||||| |||| ||||| |||||||||| |  | || ||||||||||||    
T  7162934 tatttaatataaaatgaacaagtttcaattcaaacttactattttaaaattcttaaaaaatacatatttgtacatga 7163010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 2571269 - 2571437
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  2571269 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattgaaaccaacaattatttaacaaaaagtta---tatattt 2571365  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||| ||||||| ||| |  |||| |||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  2571366 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatttgcacatga 2571437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 10307767 - 10307935
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||||||| || ||| |||   |||||||| ||  || ||||||||||||  |||| ||||||   |||||||||   |||||||    
T  10307767 gtttgtctaacatgtgcaatattgcacatgataaggtaactaaaagtagcaaatttttattgaaaccaacaattatttaacaaaaagtta---tatattt 10307863  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||| ||||||| ||| |  |||| ||||||||| ||||| || |||||||||||| |||||||| ||||||    
T  10307864 aatacaaaatgttcaagttccaatgcaaatttactattttaaatttcttaacatgtgcaaatttgcacatga 10307935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 202
Target Start/End: Complemental strand, 54527884 - 54527717
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| |||| |||||| || |||||||    ||||||    
T  54527884 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagtt---ttatatt 54527788  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 202  Q
    |||||| |||||||||| |  |||| |||| ||   ||||| || |||||||||||| |||||||| ||||    
T  54527787 taatattaaatgtacaagttccaatacaaaatttatattttaaatttcttaacatgtgcaaatttgcacat 54527717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 38389447 - 38389616
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || ||||||| | | |||||| || ||| |||||||||||||  || | |||||| |||||||| ||||   ||||    
T  38389447 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctaca---tatt 38389543  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| ||||| |||| |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  38389544 taatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatga 38389616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 50204403 - 50204572
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||| ||||| || |||||||||| |||| | || |||||||    ||||||    
T  50204403 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttggaaaataacaattatatattcaaaagtt---ttatatt 50204499  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| |||||||||  |  |||| |||| || | ||||| || |||||||||||| |||||||| ||||||    
T  50204500 taatattaaatgtacaggttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgcacatga 50204572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 141
Target Start/End: Original strand, 20938056 - 20938162
Alignment:
Q  32 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatat 130  Q
    ||||||| |||||||||||||||| || |||||||   |||||||| |||||||||||||||||||| ||||| |||||  ||||||| ||||   ||||    
T  20938056 tgtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtaataactttttattgaaaactaacaattattgattaaaaa-ttac---atat 20938151  T
Q  131 ttaatataaaa 141  Q
    |||||||||||    
T  20938152 ttaatataaaa 20938162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 204
Target Start/End: Complemental strand, 46492519 - 46492352
Alignment:
Q  35 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatattta 133  Q
    |||||||| |||||||||||| || |||||||| ||||||||| |  ||| ||||||||| |||| |||| |||||| ||||  |||||   ||||||||    
T  46492519 ttgtttaaaatgtgcaatattgcacatgttaaagcaactaaaagtggtaagtttttattgaaaaacaacaattatttattaacgagtta---tatattta 46492423  T
Q  134 atataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||| ||||||||||| |  |||| |||| |||| | ||| || |||||||| |||  ||||||| ||||||    
T  46492422 atacaaaatgtacaagtttcaatgcaaagttactactttaaatttcttaacgtgtgaaaatttgcacatga 46492352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 51618050 - 51618216
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || ||||||||||||||||||  |  || |||||| || |||| |||| |||||| ||||||   ||   ||||||    
T  51618050 gtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagcagcaagtttttactgaaaaacaacaattatttattaaaa---ta---tatatt 51618143  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||| ||||||||||| |  |||| |||| |||| ||||  || |||||||||||| |||||||| ||||||    
T  51618144 taatacaaaatgtacaagttccaatgcaaagttacaatttgaaacttcttaacatgtgcaaatttgcacatga 51618216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 143
Target Start/End: Original strand, 53794781 - 53794872
Alignment:
Q  50 aatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatttaatataaaatg 143  Q
    |||||| || |||||||| ||||||||| |||||||| ||||||||||| ||||| | |||| ||||||||||||   |||||||||||||||||    
T  53794781 aatattgcacatgttaaaccaactaaaaataataactatttattgaaaagtaacaataatttattaaaaagttac---atatttaatataaaatg 53794872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 120
Target Start/End: Complemental strand, 2379238 - 2379162
Alignment:
Q  42 acatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagt 120  Q
    |||||||||||||| || |||||||||||||||||| || ||| |||||||||  ||||||| |||||| |||||||||    
T  2379238 acatgtgcaatattgcacatgttaaaacaactaaaagtagtaagtttttattg--aataacaattatttattaaaaagt 2379162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 194
Target Start/End: Complemental strand, 38786468 - 38786343
Alignment:
Q  65 aaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaattt 164  Q
    ||||||||||||| || ||| |||||||||||||||||| |||||| |||||||  |||||   ||||| ||||||||  ||||||  ||| ||||| ||    
T  38786468 aaaacaactaaaaatagtaattttttattgaaaataacaattatttattaaaaa-atacac---atttagtataaaatccacaaatttcaaatcaaaatt 38786373  T
Q  165 accattttgaaattcttaacatgttcaaat 194  Q
    || ||||| || |||||||||||| |||||    
T  38786372 actattttaaacttcttaacatgtgcaaat 38786343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 11610915 - 11611083
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || |||||||  ||||||||| || |||||||| ||||||||  |||| |||||| || |||||||||   |||||    
T  11610915 gtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttatt-aaaagttac---atatt 11611010  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||||||   |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||| ||||||    
T  11611011 taatataaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatttgcacatga 11611083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 24569408 - 24569324
Alignment:
Q  40 taacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagttac 123  Q
    ||||||||||||||||  | ||||||| ||||||| || |||||||||||||||| |||| | || |||||| ||||||||||||    
T  24569408 taacatgtgcaatattggacatgttaagacaactacaaataataactttttattgaaaaacatcaattatttattaaaaagttac 24569324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 37444149 - 37444232
Alignment:
Q  35 ttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 118  Q
    |||| |||||||||||||||| || |||||||  ||||||||| || ||||||||||||||||  |||| ||| || |||||||    
T  37444149 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaatcaacaattaattattaaaaa 37444232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 40330468 - 40330381
Alignment:
Q  32 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaag 119  Q
    |||||||||||||| ||||| |||||  ||| |||||||| ||||| || |||||||| |||||||| |||| | |||| ||||||||    
T  40330468 tgtttgtttaacatatgcaacattacgcatgataaaacaattaaaaatagtaacttttaattgaaaacaacaataatttattaaaaag 40330381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 13495294 - 13495455
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 131  Q
    |||||| ||||||||||||  || || |||||||   |||||||| || ||| |||||||||||||| |||| |||||| |||||||  |||   |||||    
T  13495294 gtttgtctaacatgtgcaaatttgcacatgttaaggtaactaaaagtagtaattttttattgaaaatcaacaattatttattaaaaacctac---atatt 13495390  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 196  Q
    |||||||||||| |||| |  ||| ||||| |||| | ||| || |||||| ||||| |||||||    
T  13495391 taatataaaatgcacaagttccaagtcaaaattactactttaaacttcttatcatgtgcaaattt 13495455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 196
Target Start/End: Original strand, 42180052 - 42180213
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || |||||||||||||||| | || ||||||||| || |||||  | | |||||| || |||||||    ||||||    
T  42180052 gtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaactataattatttatttaaaagtt---ttatatt 42180148  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 196  Q
    |||||| |||||||||| |  |||| |||| ||   ||||| || |||||||||||| |||||||    
T  42180149 taatattaaatgtacaagttccaatacaaaatttttattttaaacttcttaacatgtgcaaattt 42180213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 37055544 - 37055455
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg-aaaataacagttatttgttaaaaagtt 121  Q
    |||||| |||||||| ||||||| |||||||||||  |||||||| || |||||||  |||| |||| |||| |||||| ||||||||||    
T  37055544 gtttgtctaacatgtacaatattgcatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagtt 37055455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 47386922 - 47387013
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattg--aaaataacagttatttgttaaaaagtta 122  Q
    |||||| |||||||||||||||| |  || ||||| ||||||||| || ||| |||||||||  |||| |||| |||||| |||||||||||    
T  47386922 gtttgtctaacatgtgcaatattgcgcatattaaagcaactaaaagtagtaagtttttattgaaaaaaaaacaattatttattaaaaagtta 47387013  T

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Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 51401531 - 51401607
Alignment:
Q  126 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacat 202  Q
    |||||||||||| |||||||||| |  |||| |||| || | ||||| || |||||||||||| |||||||||||||    
T  51401531 tatatttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatttgtacat 51401607  T

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Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 8497601 - 8497550
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataa 84  Q
    |||| |||||||||||||| ||| || |||||||||||||||||| ||||||    
T  8497601 gtttatttaacatgtgcaacattgcacatgttaaaacaactaaaagtaataa 8497550  T

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Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 204
Target Start/End: Original strand, 45983516 - 45983675
Alignment:
Q  40 taacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatatttaatataa 139  Q
    |||||||||||| |||||||  |||||||||| ||| | || ||||||||| ||   || |||| ||||||||| |||||| |   |||||||||||| |    
T  45983516 taacatgtgcaacattacat--gttaaaacaattaatagtagtaacttttttttttgaaaaacaattatttgttcaaaagtaa---tatatttaatatta 45983610  T
Q  140 aatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||||| |  ||||  ||| || | ||||| || |||||||| ||| |||||||| ||||||    
T  45983611 aatgtacaagtttcaatataaaatttctattttaaacttcttaacctgtgcaaatttgcacatga 45983675  T

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Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 46845618 - 46845531
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaag 119  Q
    |||||| ||| |||||||||||| || || ||||| ||||||||| ||  || |||||||||||||| |||| |||||| ||||||||    
T  46845618 gtttgtctaatatgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattatttattaaaaag 46845531  T

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Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 13879973 - 13879899
Alignment:
Q  44 atgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 118  Q
    ||||||||||||||| || |||||| |||| ||| | | ||||||||||||||||  ||| |||||| |||||||    
T  13879973 atgtgcaatattacacatcttaaaataactgaaagtgaaaactttttattgaaaaccacaattatttattaaaaa 13879899  T

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Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 25633121 - 25633167
Alignment:
Q  158 caaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||||| |||||||| ||||||||| ||||||||||| ||||||    
T  25633121 caaatttactattttgaacttcttaacaagttcaaatttgcacatga 25633167  T

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Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 26200799 - 26200733
Alignment:
Q  32 tgtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    ||||||| |||||| ||||||||| ||||||||||| ||||||  | || |||||||||| ||||||    
T  26200799 tgtttgtataacatttgcaatattgcatatgttaaagcaactaggagtagtaactttttactgaaaa 26200733  T

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Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 12515651 - 12515491
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaagttacactatattt 132  Q
    |||||| |||||||||||||||| || |||||||   |||||||| ||  || |||||||| |||  |||| ||||||   |||||||||   |||||||    
T  12515651 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattaaaaccaacaattatttaacaaaaagtta---tatattt 12515555  T
Q  133 aatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaattt 196  Q
    |||| ||||||| ||| |  | || |||| |||| ||||| || || ||||||||| |||||||    
T  12515554 aatacaaaatgttcaagttcctatgcaaagttactattttaaattttttaacatgtgcaaattt 12515491  T

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Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 23523038 - 23523115
Alignment:
Q  127 atatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||||||| ||||| |||| |  ||| ||||| |||||| ||| || |||||||||||| |||||||| ||||||    
T  23523038 atatttaatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgcaaatttgcacatga 23523115  T

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Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 30214187 - 30214103
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaa 117  Q
    |||||| ||||||||||||||||||| ||  |||  ||||||||| || |||||||| ||||||||| |||| |||||| ||||||    
T  30214187 gtttgtctaacatgtgcaatattacacattctaaggcaactaaaa-tagtaacttttcattgaaaatcaacaattatttattaaaa 30214103  T

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Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 32321899 - 32321835
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa 98  Q
    |||||| ||||||||| |||||| |||||||||||| |||||||| ||  ||| ||||||||||||    
T  32321899 gtttgtataacatgtgtaatattgcatatgttaaaagaactaaaaatatcaac-ttttattgaaaa 32321835  T

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Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 203
Target Start/End: Original strand, 49396471 - 49396548
Alignment:
Q  126 tatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatg 203  Q
    |||||||||||||||||| | ||||   ||||||||||||| | ||| || ||||||| |||| |||||||| |||||    
T  49396471 tatatttaatataaaatgcataaattttaattcaaatttactactttaaacttcttaatatgtacaaatttgcacatg 49396548  T

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Target: scaffold0111 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 37292 - 37123
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaat-aacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||| ||| || ||||||| | | |||||| || ||| |||||||||||||  || | |||||| |||||||| ||||   ||||    
T  37292 gtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctaca---tatt 37196  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    |||||| ||||| |||| |  ||| ||||| ||| || ||| || |||||||||||| |||||||| ||||||    
T  37195 taatatgaaatgcacaagttccaagtcaaagttatcactttaaacttcttaacatgtgcaaatttgcacatga 37123  T

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Target: scaffold0631 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 77
Target Start/End: Original strand, 443 - 486
Alignment:
Q  34 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaa 77  Q
    |||||||||||||||||||||| || |||||||| |||||||||    
T  443 tttgtttaacatgtgcaatattgcacatgttaaatcaactaaaa 486  T

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Target: scaffold0129 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 13829 - 13723
Alignment:
Q  40 taacatgtgcaatattacatatgttaaaacaactaaaattaataactttttatt-gaaaataacagttatttgttaaaaagttacactatatttaatata 138  Q
    |||||||||||| ||| || |||||||||||||||| | || ||||||||| || ||||| || |||||||| || |||||||    ||||||||||||     
T  13829 taacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaaaagttatttatttaaaagtt---ttatatttaatatt 13733  T
Q  139 aaatgtacaa 148  Q
     |||||||||    
T  13732 taatgtacaa 13723  T

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Target: scaffold0618 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 8564 - 8506
Alignment:
Q  60 atgttaaaacaactaaaattaataactttttattgaaaataacagttatttgttaaaaa 118  Q
    ||||||||||||| |||| || ||| ||||||||||||| |||| |||||| |||||||    
T  8564 atgttaaaacaacgaaaagtattaattttttattgaaaacaacaattatttattaaaaa 8506  T

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Target: scaffold0061 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 204
Target Start/End: Complemental strand, 52956 - 52788
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||  |||| ||| ||| | |||||||||   |||||    
T  52956 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaatta-ttgattaaaagttac---atatt 52861  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||| ||||   |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  52860 taatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatga 52788  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 145
Target Start/End: Complemental strand, 94195 - 94086
Alignment:
Q  34 tttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatattt 132  Q
    ||||| |||||| ||||| ||| || |||||||| ||||||||| || ||| ||||||||||||| ||| | |||||| |||||||   ||  |||||||    
T  94195 tttgtctaacatatgcaacattgcacatgttaaatcaactaaaagtagtaagtttttattgaaaactaataattatttattaaaaa---actatatattt 94099  T
Q  133 aatataaaatgta 145  Q
    |||| ||||||||    
T  94098 aatacaaaatgta 94086  T

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Target: scaffold0017 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 145678 - 145846
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| || |||||||   |||||||| || |||||||| ||||||||  |||| ||| ||| | |||||||||   |||||    
T  145678 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaatta-ttgattaaaagttac---atatt 145773  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||| ||||   |||| |  ||| ||||| |||| | ||| || |||||||||||| |||||||| ||||||    
T  145774 taatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatttgcacatga 145846  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 204
Target Start/End: Original strand, 13086 - 13254
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaattaataactttttattgaaaa-taacagttatttgttaaaaagttacactatatt 131  Q
    |||||| |||||||||||||||| ||||||||||   |||||||| || ||| |||| ||||||||  |||| ||  ||| | ||||| |||   |||||    
T  13086 gtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaatt-gttgattaaaagctac---atatt 13181  T
Q  132 taatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaatttgtacatga 204  Q
    ||||||||||   ||||||  ||| | ||| |||| ||||| || |||||||||||| |||||||| ||||||    
T  13182 taatataaaaaacacaaattccaaattaaagttactattttaaacttcttaacatgtgcaaatttgcacatga 13254  T

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Target: scaffold0305 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 18111 - 18012
Alignment:
Q  95 aaaataacagttatttgttaaaaagttacactatatttaatataaaatgtacaaatagcaattcaaatttaccattttgaaattcttaacatgttcaaat 194  Q
    |||| |||| |||||| ||| |||||||   |||||||||||||||||||||||||  |||| ||||  ||| ||||||||  | |||||| || |||||    
T  18111 aaaacaacaattatttattagaaagtta---tatatttaatataaaatgtacaaattccaatacaaacatactattttgaacattttaacacgtgcaaat 18015  T

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Target: scaffold0149 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 22460 - 22504
Alignment:
Q  33 gtttgtttaacatgtgcaatattacatatgttaaaacaactaaaa 77  Q
    |||| |||||||||||||||||| || |||||||| |||||||||    
T  22460 gtttctttaacatgtgcaatattgcacatgttaaatcaactaaaa 22504  T

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