View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10481A_low_48 (Length: 420)
Name: NF10481A_low_48
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10481A_low_48 |
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Alignment Details
Target: chr7 (Bit Score: 375; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 1 - 413
Target Start/End: Complemental strand, 32240629 - 32240215
Alignment:
| Q |
1 |
gagatgaaatgaacacagcaagcaccattttatagagaaaaagggca--tatgaatttcatcttttatacacgcagtgtcagaatcaattaaaagaaaag |
98 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32240629 |
gagatgaaatgaacacagcaagcaccattttatagagaaaaagggcacatatgaatttcatcttttatacacgcagtgtcagaatcaattaaaagaaaag |
32240530 |
T |
|
| Q |
99 |
aagggaaaaatcagtatctctgacccattgccaatagtttcaaacttcctgacacatggtaattaccttttgcagaaaccacatataccctaaaccagaa |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32240529 |
aagggaaaaatcagtatctctgacccattgccaatagtttcaaacttcctgacacatggtaattaccttttgcagaaaccacatataccctaaaccagaa |
32240430 |
T |
|
| Q |
199 |
atttccagcaaatgaagtaaaatttatagtgnnnnnnngacagataaaatgcattgtttaatcaaccaatccaagtgaaaattaaattaaaacaggggga |
298 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32240429 |
atttccagcaaatgaagtaaaatttatagtgaaaaaaagacagataaaatgcattgtttaatcaaccaatccaagtgaaaattaaattaaaacagggggg |
32240330 |
T |
|
| Q |
299 |
tttcagaatctctgaacaaaagacaaaattttcaaaccttctgacaaaagtttaacaccttttataggtgctctgtgagtggaaaccccagagagcaccg |
398 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32240329 |
tttcagaatctctgaacaaaagacaaaattttcaaaccttctgacaaaagtttaacaccttttataggtgctctgtgagtggaaaccccagagagcaccg |
32240230 |
T |
|
| Q |
399 |
tagaagcctataaac |
413 |
Q |
| |
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|||||||||||||| |
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| T |
32240229 |
cagaagcctataaac |
32240215 |
T |
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