View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10481A_low_494 (Length: 239)
Name: NF10481A_low_494
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10481A_low_494 |
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Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 6 - 233
Target Start/End: Original strand, 8293621 - 8293848
Alignment:
| Q |
6 |
cgtgttaatttctctgattccagatattttgttgctgcgttttgtatagcgtccgtgtcatgtgcatttgatctccatataattaattgcatctctggtt |
105 |
Q |
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| T |
8293621 |
cgtgttaatttctctgattccagatattttgttgctgcgttttgtatagcgtccgtgtcatgtgcatttgatctccatataattaattgcatctctggtt |
8293720 |
T |
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| Q |
106 |
taggtgctattttttcaataacaaatgtagaatattagtatgttattagttaggttagtattgttttctctcgtgacgattaaattgattatcagtttct |
205 |
Q |
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| T |
8293721 |
taggtgctatttttttaataacaaatgtagaatattagtatgttaatagttaggttagtattgttttctctcgtgacgattaaattgattatcagtttct |
8293820 |
T |
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| Q |
206 |
gcaatgttcacgtttctgttgtttttat |
233 |
Q |
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| T |
8293821 |
gcaatgtacacgtttctgttgtttttat |
8293848 |
T |
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