View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10481A_low_505 (Length: 238)

Name: NF10481A_low_505
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10481A_low_505
NF10481A_low_505
[»] scaffold0056 (1 HSPs)
scaffold0056 (81-220)||(66300-66439)
[»] chr8 (22 HSPs)
chr8 (81-220)||(31723233-31723372)
chr8 (102-220)||(36727778-36727896)
chr8 (81-215)||(22318584-22318718)
chr8 (84-215)||(23889017-23889148)
chr8 (83-220)||(17907592-17907729)
chr8 (83-215)||(22584362-22584495)
chr8 (81-161)||(36728008-36728088)
chr8 (83-220)||(17217879-17218016)
chr8 (81-214)||(20024913-20025045)
chr8 (81-185)||(31723458-31723562)
chr8 (81-161)||(45471141-45471221)
chr8 (83-220)||(22244695-22244831)
chr8 (83-214)||(23947492-23947621)
chr8 (81-135)||(5760868-5760922)
chr8 (81-126)||(6102464-6102509)
chr8 (81-126)||(21346071-21346116)
chr8 (81-126)||(23914259-23914304)
chr8 (81-126)||(20084349-20084394)
chr8 (83-145)||(22259064-22259125)
chr8 (182-216)||(23450847-23450881)
chr8 (182-216)||(34301925-34301959)
chr8 (180-216)||(26222945-26222981)
[»] chr2 (13 HSPs)
chr2 (81-220)||(27851867-27852006)
chr2 (81-220)||(44071780-44071919)
chr2 (81-220)||(27860573-27860712)
chr2 (81-213)||(22259261-22259393)
chr2 (81-215)||(25141375-25141509)
chr2 (103-220)||(18390953-18391070)
chr2 (81-215)||(3539028-3539163)
chr2 (83-219)||(5985377-5985512)
chr2 (81-185)||(25141185-25141289)
chr2 (109-216)||(6477919-6478026)
chr2 (81-126)||(9784917-9784962)
chr2 (130-215)||(10897168-10897253)
chr2 (82-126)||(23069122-23069166)
[»] chr3 (39 HSPs)
chr3 (81-215)||(11562908-11563042)
chr3 (83-220)||(13179433-13179570)
chr3 (82-220)||(16059520-16059658)
chr3 (82-220)||(16044660-16044798)
chr3 (87-215)||(20417374-20417502)
chr3 (81-168)||(11192226-11192313)
chr3 (83-216)||(52338592-52338725)
chr3 (81-185)||(11562714-11562818)
chr3 (81-215)||(17258854-17258988)
chr3 (83-216)||(14818316-14818449)
chr3 (82-220)||(16050137-16050273)
chr3 (81-156)||(6155923-6155998)
chr3 (83-216)||(17548174-17548311)
chr3 (81-135)||(14441503-14441557)
chr3 (81-135)||(17046497-17046551)
chr3 (81-135)||(54876146-54876200)
chr3 (81-126)||(19569041-19569086)
chr3 (81-126)||(42353385-42353430)
chr3 (81-135)||(11192416-11192470)
chr3 (81-135)||(17691468-17691522)
chr3 (84-126)||(18700145-18700187)
chr3 (85-126)||(12470141-12470182)
chr3 (85-126)||(14671163-14671204)
chr3 (85-126)||(14682662-14682703)
chr3 (81-126)||(43889471-43889516)
chr3 (82-126)||(6156042-6156086)
chr3 (103-215)||(11850279-11850395)
chr3 (82-216)||(10550559-10550693)
chr3 (81-147)||(13519578-13519644)
chr3 (81-135)||(17685506-17685560)
chr3 (170-216)||(52213105-52213151)
chr3 (180-216)||(21618656-21618692)
chr3 (180-216)||(36166805-36166841)
chr3 (81-135)||(9511828-9511882)
chr3 (81-135)||(9519803-9519857)
chr3 (182-216)||(12158658-12158692)
chr3 (177-215)||(45531247-45531285)
chr3 (184-220)||(13919554-13919590)
chr3 (171-215)||(23395699-23395743)
[»] scaffold0002 (1 HSPs)
scaffold0002 (83-220)||(127418-127555)
[»] scaffold0251 (1 HSPs)
scaffold0251 (81-220)||(20648-20787)
[»] chr1 (14 HSPs)
chr1 (81-215)||(13302076-13302210)
chr1 (85-215)||(51476270-51476400)
chr1 (83-216)||(52983437-52983570)
chr1 (83-216)||(18823898-18824031)
chr1 (83-216)||(13528417-13528554)
chr1 (81-126)||(14238324-14238369)
chr1 (83-220)||(42697012-42697148)
chr1 (81-126)||(51082511-51082556)
chr1 (81-147)||(38887818-38887884)
chr1 (81-126)||(7052767-7052812)
chr1 (83-215)||(18270553-18270689)
chr1 (83-215)||(18275207-18275343)
chr1 (81-140)||(21239953-21240012)
chr1 (95-135)||(4596508-4596548)
[»] chr5 (16 HSPs)
chr5 (85-218)||(20469751-20469884)
chr5 (81-213)||(21618672-21618803)
chr5 (83-216)||(22357585-22357718)
chr5 (81-185)||(20565699-20565803)
chr5 (83-216)||(8952679-8952810)
chr5 (128-220)||(25250522-25250614)
chr5 (128-220)||(25314307-25314399)
chr5 (81-161)||(29914563-29914643)
chr5 (81-147)||(32608055-32608121)
chr5 (81-208)||(21406320-21406447)
chr5 (81-147)||(36509507-36509573)
chr5 (180-216)||(18318942-18318978)
chr5 (81-126)||(20565889-20565934)
chr5 (184-220)||(20572112-20572148)
chr5 (180-216)||(20765993-20766029)
chr5 (101-145)||(23200257-23200301)
[»] chr7 (29 HSPs)
chr7 (81-213)||(15096316-15096448)
chr7 (84-211)||(14219646-14219773)
chr7 (81-215)||(15139411-15139546)
chr7 (83-215)||(11053922-11054054)
chr7 (81-215)||(19557954-19558088)
chr7 (91-220)||(4071024-4071153)
chr7 (83-220)||(15281553-15281690)
chr7 (81-185)||(13133216-13133320)
chr7 (81-215)||(16077610-16077744)
chr7 (81-220)||(48809153-48809292)
chr7 (81-215)||(13132996-13133130)
chr7 (83-215)||(3289446-3289582)
chr7 (81-126)||(14258687-14258732)
chr7 (81-126)||(14929044-14929089)
chr7 (81-126)||(15352510-15352555)
chr7 (81-126)||(16460604-16460649)
chr7 (81-126)||(16579995-16580040)
chr7 (81-126)||(16585623-16585668)
chr7 (81-126)||(32301517-32301562)
chr7 (81-135)||(1489934-1489988)
chr7 (170-216)||(21735127-21735173)
chr7 (103-215)||(8135750-8135862)
chr7 (85-126)||(20487782-20487823)
chr7 (170-215)||(13255914-13255959)
chr7 (170-215)||(13256009-13256054)
chr7 (83-135)||(33001252-33001303)
chr7 (177-220)||(9177525-9177568)
chr7 (95-135)||(32434253-32434293)
chr7 (180-216)||(48273600-48273636)
[»] scaffold0008 (1 HSPs)
scaffold0008 (81-220)||(136241-136380)
[»] scaffold0004 (2 HSPs)
scaffold0004 (85-220)||(109458-109593)
scaffold0004 (83-215)||(59635-59771)
[»] scaffold0028 (1 HSPs)
scaffold0028 (81-215)||(3717-3851)
[»] chr6 (21 HSPs)
chr6 (87-216)||(24267061-24267190)
chr6 (82-215)||(6083417-6083550)
chr6 (83-211)||(22212139-22212268)
chr6 (81-215)||(23500916-23501050)
chr6 (83-216)||(13750981-13751114)
chr6 (83-220)||(31735547-31735683)
chr6 (87-185)||(23491974-23492072)
chr6 (87-185)||(23497572-23497670)
chr6 (81-126)||(19773381-19773426)
chr6 (81-126)||(23491843-23491888)
chr6 (81-126)||(23497441-23497486)
chr6 (81-135)||(19655892-19655946)
chr6 (81-126)||(15705283-15705328)
chr6 (81-126)||(22806168-22806213)
chr6 (103-215)||(5110399-5110515)
chr6 (81-124)||(23655673-23655716)
chr6 (180-216)||(16448435-16448471)
chr6 (81-140)||(28947679-28947738)
chr6 (103-212)||(5289761-5289874)
chr6 (95-135)||(17318785-17318825)
chr6 (180-220)||(22376537-22376577)
[»] scaffold1186 (1 HSPs)
scaffold1186 (81-185)||(856-960)
[»] scaffold0181 (1 HSPs)
scaffold0181 (84-216)||(34018-34150)
[»] scaffold0005 (1 HSPs)
scaffold0005 (81-185)||(187308-187412)
[»] chr4 (22 HSPs)
chr4 (81-185)||(14629971-14630075)
chr4 (83-216)||(4615693-4615826)
chr4 (83-216)||(14933068-14933201)
chr4 (81-167)||(16026765-16026851)
chr4 (83-216)||(20899387-20899520)
chr4 (81-160)||(9638106-9638185)
chr4 (122-216)||(14942273-14942367)
chr4 (83-220)||(21061818-21061955)
chr4 (83-212)||(27028027-27028156)
chr4 (83-215)||(2584835-2584971)
chr4 (83-215)||(6511866-6512002)
chr4 (81-135)||(53631136-53631190)
chr4 (81-126)||(3485206-3485251)
chr4 (83-216)||(13446744-13446876)
chr4 (81-126)||(16026628-16026673)
chr4 (128-216)||(18229996-18230084)
chr4 (87-126)||(19734587-19734626)
chr4 (180-216)||(54798627-54798663)
chr4 (83-126)||(33243968-33244011)
chr4 (180-213)||(14280524-14280557)
chr4 (179-220)||(50160383-50160424)
chr4 (180-216)||(8574742-8574778)
[»] scaffold1695 (1 HSPs)
scaffold1695 (81-215)||(651-785)
[»] scaffold0445 (1 HSPs)
scaffold0445 (83-220)||(2555-2693)
[»] scaffold0273 (1 HSPs)
scaffold0273 (83-216)||(6912-7045)
[»] scaffold0413 (1 HSPs)
scaffold0413 (87-214)||(10972-11099)
[»] scaffold0042 (1 HSPs)
scaffold0042 (83-216)||(28570-28701)
[»] scaffold2046 (1 HSPs)
scaffold2046 (83-216)||(402-535)
[»] scaffold0453 (1 HSPs)
scaffold0453 (83-216)||(3327-3460)
[»] scaffold0371 (1 HSPs)
scaffold0371 (81-166)||(16893-16978)
[»] scaffold0241 (4 HSPs)
scaffold0241 (81-186)||(4833-4938)
scaffold0241 (81-161)||(1680-1760)
scaffold0241 (81-126)||(5023-5068)
scaffold0241 (81-126)||(1870-1915)
[»] scaffold0010 (1 HSPs)
scaffold0010 (103-220)||(127041-127158)
[»] scaffold0529 (2 HSPs)
scaffold0529 (81-185)||(7632-7736)
scaffold0529 (81-126)||(7823-7868)
[»] scaffold0628 (2 HSPs)
scaffold0628 (111-215)||(4158-4260)
scaffold0628 (111-215)||(8718-8820)
[»] scaffold0429 (1 HSPs)
scaffold0429 (83-216)||(2617-2750)
[»] scaffold0309 (2 HSPs)
scaffold0309 (83-216)||(6198-6331)
scaffold0309 (83-216)||(8350-8483)
[»] scaffold0107 (1 HSPs)
scaffold0107 (83-216)||(3170-3303)
[»] scaffold0026 (1 HSPs)
scaffold0026 (81-138)||(146028-146085)
[»] scaffold0123 (1 HSPs)
scaffold0123 (128-216)||(1903-1991)
[»] scaffold1283 (1 HSPs)
scaffold1283 (81-135)||(1130-1184)
[»] scaffold0490 (1 HSPs)
scaffold0490 (83-213)||(5116-5246)
[»] scaffold0061 (2 HSPs)
scaffold0061 (81-135)||(15249-15303)
scaffold0061 (81-135)||(24307-24361)
[»] scaffold1633 (1 HSPs)
scaffold1633 (81-126)||(503-548)
[»] scaffold0409 (2 HSPs)
scaffold0409 (83-220)||(519-655)
scaffold0409 (83-220)||(8774-8910)
[»] scaffold0331 (2 HSPs)
scaffold0331 (155-216)||(4064-4125)
scaffold0331 (177-219)||(12760-12802)
[»] scaffold0292 (1 HSPs)
scaffold0292 (81-126)||(6848-6893)
[»] scaffold0207 (1 HSPs)
scaffold0207 (81-126)||(15221-15266)
[»] scaffold0205 (1 HSPs)
scaffold0205 (81-126)||(29905-29950)
[»] scaffold0146 (1 HSPs)
scaffold0146 (81-126)||(22353-22398)
[»] scaffold0077 (1 HSPs)
scaffold0077 (81-126)||(33645-33690)
[»] scaffold0039 (1 HSPs)
scaffold0039 (81-126)||(10641-10686)
[»] scaffold0019 (1 HSPs)
scaffold0019 (81-126)||(29453-29498)
[»] scaffold0018 (1 HSPs)
scaffold0018 (81-126)||(20987-21032)
[»] scaffold0520 (1 HSPs)
scaffold0520 (81-220)||(83-222)
[»] scaffold0439 (2 HSPs)
scaffold0439 (81-135)||(3754-3808)
scaffold0439 (81-147)||(11455-11521)
[»] scaffold0859 (1 HSPs)
scaffold0859 (92-149)||(3981-4038)
[»] scaffold0575 (1 HSPs)
scaffold0575 (85-126)||(5998-6039)
[»] scaffold0546 (2 HSPs)
scaffold0546 (81-126)||(11090-11135)
scaffold0546 (81-126)||(7270-7315)
[»] scaffold0232 (1 HSPs)
scaffold0232 (85-126)||(3609-3650)
[»] scaffold0117 (1 HSPs)
scaffold0117 (83-216)||(40852-40985)
[»] scaffold0109 (2 HSPs)
scaffold0109 (81-126)||(689-734)
scaffold0109 (81-126)||(5992-6037)
[»] scaffold0096 (1 HSPs)
scaffold0096 (81-126)||(21403-21448)
[»] scaffold0047 (1 HSPs)
scaffold0047 (81-126)||(78357-78402)
[»] scaffold0113 (1 HSPs)
scaffold0113 (81-136)||(34564-34619)
[»] scaffold0188 (1 HSPs)
scaffold0188 (83-216)||(264-397)
[»] scaffold0338 (1 HSPs)
scaffold0338 (128-220)||(11449-11541)
[»] scaffold0021 (1 HSPs)
scaffold0021 (81-135)||(168772-168826)
[»] scaffold0452 (1 HSPs)
scaffold0452 (81-126)||(13337-13382)
[»] scaffold0326 (1 HSPs)
scaffold0326 (170-215)||(8-53)
[»] scaffold0151 (1 HSPs)
scaffold0151 (183-220)||(30409-30446)
[»] scaffold0034 (1 HSPs)
scaffold0034 (81-126)||(120245-120290)
[»] scaffold0022 (1 HSPs)
scaffold0022 (180-216)||(116637-116673)
[»] scaffold0716 (1 HSPs)
scaffold0716 (182-220)||(1270-1308)
[»] scaffold0017 (1 HSPs)
scaffold0017 (81-135)||(25851-25905)
[»] scaffold0379 (1 HSPs)
scaffold0379 (178-219)||(14473-14514)
[»] scaffold0708 (1 HSPs)
scaffold0708 (184-220)||(2286-2322)
[»] scaffold0112 (1 HSPs)
scaffold0112 (92-155)||(2132-2193)
[»] scaffold0083 (2 HSPs)
scaffold0083 (83-135)||(645-696)
scaffold0083 (83-135)||(5949-6000)


Alignment Details
Target: scaffold0056 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 81 - 220
Target Start/End: Original strand, 66300 - 66439
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||| | ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||| |||||    
T  66300 tatttctatatcatacaatttccacatcatatatgtatctcaaattaaccaacaacaataatcatattaattcagactcactgaaagattatacttttat 66399  T
Q  181 aaacaacttccattcctaccccaaagaccaactcataaca 220  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  66400 aaacaactttcattcctaccccaaagaccaactcagaaca 66439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 8e-45; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 81 - 220
Target Start/End: Complemental strand, 31723372 - 31723233
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    |||||||||| ||||||||| |||||||||| |||| | ||||| |||||    
T  31723372 tatttctatatcatacaatattcacataatatatgtatctcaaattatttaacaacaatattcatattaattcagactcactgaaatactatacatttat 31723273  T
Q  181 aaacaacttccattcctaccccaaagaccaactcataaca 220  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  31723272 aaacaacttcaattcctaccccaaagaccaactcagaaca 31723233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 36727896 - 36727778
Alignment:
Q  102 tcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataaacaacttccattcctaccc 201  Q
    |||||||||||||||||||||||||   ||||||||||| ||||||||| |||||||||| |||||| ||||| ||||||||||||||||||||||||||    
T  36727896 tcacataatatatgtatctcaaattattcaacaacaatattcatattaattcagactcactgaaagactatacatttataaacaacttccattcctaccc 36727797  T
Q  202 caaagaccaactcataaca 220  Q
    ||||||| |||||||||||    
T  36727796 caaagacaaactcataaca 36727778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 22318718 - 22318584
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||  |||||||||||| ||||||||| |||||||||| ||||||  ||||  ||||    
T  22318718 tatttctatatcatacaatatccacgtaatatatgtatctcaaattatccaacaacaatattcatattaattcagactcactgaaagacaatacaattat 22318619  T
Q  181 aaacaacttccattcctaccccaaagaccaactca 215  Q
    || |||||| ||||||||||||||| |||||||||    
T  22318618 aagcaactttcattcctaccccaaaaaccaactca 22318584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 215
Target Start/End: Original strand, 23889017 - 23889148
Alignment:
Q  84 ttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataaa 183  Q
    |||||||||||||| | | ||||||||||||||| |||||||| |||||||||| |||||||||||  | ||| |||| ||||| |||||| ||||||||    
T  23889017 ttctatatcatacattttccacataatatatgtagctcaaattaaccaacaacattaatcatattagtttagattcactgaaaggttatacttttataaa 23889116  T
Q  184 caacttccattcctaccccaaagaccaactca 215  Q
    ||||||||||||||||||||||| ||||||||    
T  23889117 caacttccattcctaccccaaagtccaactca 23889148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 17907729 - 17907592
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||  | | |||||||||||||||| ||| ||| |||||||||| ||||||| |||| | ||| |||| |||||  |||||||||||||    
T  17907729 tttctatatcatactttttccacataatatatgtatttcacattaaccaacaacattaatcattttaatttagattcactgaaaggctatacctttataa 17907630  T
Q  183 acaacttccattcctaccccaaagaccaactcataaca 220  Q
    |||||||||||| |||||||||||||||||||||||||    
T  17907629 acaacttccatttctaccccaaagaccaactcataaca 17907592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 83 - 215
Target Start/End: Complemental strand, 22584495 - 22584362
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatc-atattaactcagactcaccgaaagattatacctttata 181  Q
    |||| |||||||||| | ||||||||||||||||| || | ||| |||||||||| ||| | ||||||  | ||| |||| |||||| ||||||||||||    
T  22584495 tttcaatatcatacatttttcacataatatatgtagcttagattaaccaacaacattaaaccatattagtttagattcactgaaagactatacctttata 22584396  T
Q  182 aacaacttccattcctaccccaaagaccaactca 215  Q
    |||||||||||||||||||||||| |||||||||    
T  22584395 aacaacttccattcctaccccaaataccaactca 22584362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 161
Target Start/End: Complemental strand, 36728088 - 36728008
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcac 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||||||| ||||||||||    
T  36728088 tatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaatattcatattaattcagactcac 36728008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 17217879 - 17218016
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | |||||||||||||||  ||||| | ||| |||||| ||||||| | ||  ||||||| | || || ||||||||||  ||    
T  17217879 tttctatatcatacactttccacataatatatgtaattcaaaataaccgacaacattaatcatttaaatacagactctctgagaggttatacctttgaaa 17217978  T
Q  183 acaacttccattcctaccccaaagaccaactcataaca 220  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  17217979 acaacttccattcctacccgaaagaccaactcataaca 17218016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 214
Target Start/End: Complemental strand, 20025045 - 20024913
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    |||||||||| |||||||||||||||||||||||||||||||||||  |||||| ||||| ||||||||| ||||||||||   |  |  |||   ||||    
T  20025045 tatttctata-catacaatattcacataatatatgtatctcaaattatccaacatcaatattcatattaattcagactcactacacaaaaatataattat 20024947  T
Q  181 aaacaacttccattcctaccccaaagaccaactc 214  Q
     ||||||||||||||||||||||| |||||||||    
T  20024946 gaacaacttccattcctaccccaaggaccaactc 20024913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 31723562 - 31723458
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    |||||||||||||||||||||||| |||||||||||||||||||||   ||||||||||| ||||||||| ||| |||||| ||||||  ||||  ||||    
T  31723562 tatttctatatcatacaatattcagataatatatgtatctcaaattattcaacaacaatattcatattaattcatactcactgaaagacaatacaattat 31723463  T
Q  181 aaaca 185  Q
    |||||    
T  31723462 aaaca 31723458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 81 - 161
Target Start/End: Complemental strand, 45471221 - 45471141
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcac 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||| | ||||||| ||||||||||    
T  45471221 tatttctatatcatacaatattcacataatatatgtatctcaaattatccaacatcaatatttatattaattcagactcac 45471141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 22244695 - 22244831
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | |  |||||||||||||| || || || |||||||||| ||||||| |||| |||||||||| |||  |  |||   ||||||    
T  22244695 tttctatatcatacattttcaacataatatatgtagcttaa-ttaaccaacaacattaatcattttaattcagactcactgaaccacaatataattataa 22244793  T
Q  183 acaacttccattcctaccccaaagaccaactcataaca 220  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  22244794 acaactttcattcctaccccaaagaccaactcagaaca 22244831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 214
Target Start/End: Original strand, 23947492 - 23947621
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | ||||||||||||||| ||||| || ||||| |||| ||||||| |||| |||||||||| |||  |  |||   ||||||    
T  23947492 tttctatatcatacatt-tccacataatatatgtagctcaa-ttaaccaaaaacattaatcattttaattcagactcactgaaccacaatataattataa 23947589  T
Q  183 acaacttccattcctaccccaaagaccaactc 214  Q
    ||||||| ||||||||||||||||||||||||    
T  23947590 acaactttcattcctaccccaaagaccaactc 23947621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 5760868 - 5760922
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  5760868 tatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaa 5760922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 6102509 - 6102464
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6102509 tatttctatatcatacaatattcacataatatatgtatctcaaatt 6102464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 21346116 - 21346071
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  21346116 tatttctatatcatacaatattcacataatatatgtatctcaaatt 21346071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 23914259 - 23914304
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  23914259 tatttctatatcatacaacattcacataatatatgtatctcaaatt 23914304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 20084394 - 20084349
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||    
T  20084394 tatttttatatcatacaatattcacataatatatgtacctcaaatt 20084349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 22259125 - 22259064
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcat 145  Q
    ||||||||||||||  | |||||||||||||||||| ||| ||| |||||||||| |||||||    
T  22259125 tttctatatcatacctt-ttcacataatatatgtatttcacattaaccaacaacattaatcat 22259064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 23450847 - 23450881
Alignment:
Q  182 aacaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||||||||||||||||||| |||||||||||    
T  23450847 aacaacttccattcctaccccaaggaccaactcat 23450881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 34301925 - 34301959
Alignment:
Q  182 aacaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||||||||||||||||||| |||||||||||    
T  34301925 aacaacttccattcctaccccaaggaccaactcat 34301959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 26222981 - 26222945
Alignment:
Q  180 taaacaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  26222981 taaacaactaccattcctacccgaaagaccaactcat 26222945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 8e-45; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 81 - 220
Target Start/End: Original strand, 27851867 - 27852006
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||| | |||||||||||||||| ||||||| ||||||||| |||||| |||||| |||||||||| |||||| ||||| |||||    
T  27851867 tatttctatatcatacaatttccacataatatatgtatttcaaattaaccaacaactataatcttattaattcagactcactgaaagactatacatttat 27851966  T
Q  181 aaacaacttccattcctaccccaaagaccaactcataaca 220  Q
    ||| ||||||||||||||||||||||||||||||| ||||    
T  27851967 aaagaacttccattcctaccccaaagaccaactcagaaca 27852006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 220
Target Start/End: Original strand, 44071780 - 44071919
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||  ||||||||||||||||| |||| |||||||||| ||||||  ||||  ||||    
T  44071780 tatttctatatcatacaatttccacataatatatgtatctcaaattatccaacaacaataatcatgttaattcagactcactgaaagacaatacaattat 44071879  T
Q  181 aaacaacttccattcctaccccaaagaccaactcataaca 220  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  44071880 aaacaacttacattcctaccccaaagaccaactcagaaca 44071919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 220
Target Start/End: Original strand, 27860573 - 27860712
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||| | |||||||||||| |||||||| || |||||||||| |||||||||||| ||||||||||  ||||| ||||| ||||     
T  27860573 tatttctatatcatacaatttccacataatatatctatctcaatttaaccaacaacattaatcatattaattcagactcacttaaagactatacatttaa 27860672  T
Q  181 aaacaacttccattcctaccccaaagaccaactcataaca 220  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  27860673 aaacaacttccattcctaccccaatgaccaactcagaaca 27860712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 81 - 213
Target Start/End: Original strand, 22259261 - 22259393
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||  | | |||||||| ||||||||| |||||||||| ||||||  ||||  ||||    
T  22259261 tatttctatatcatacaatattcacataatatatgcatctcaaattatctagcaacaatattcatattaattcagactcactgaaagacaatacaattat 22259360  T
Q  181 aaacaacttccattcctaccccaaagaccaact 213  Q
    ||||||||| |||||||||||||||||||||||    
T  22259361 aaacaactttcattcctaccccaaagaccaact 22259393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 25141375 - 25141509
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||||||| ||||||| |||||||||  ||||||  ||||  ||||    
T  25141375 tatttctatatcataaaatattcacataatatatgtatctcaaattattcaacaacaataattatattaattcagactcagtgaaagacaatacaattat 25141474  T
Q  181 aaacaacttccattcctaccccaaagaccaactca 215  Q
    ||||||||| |||| ||||||||||||||||||||    
T  25141475 aaacaactttcatttctaccccaaagaccaactca 25141509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 103 - 220
Target Start/End: Complemental strand, 18391070 - 18390953
Alignment:
Q  103 cacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataaacaacttccattcctacccc 202  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||||| | |||||||| |||||  |||||||||||||||||||| ||||||||||||    
T  18391070 cacataatatatgtagctcaaattaaccaacaaaaataatcatattaatttagactcactgaaaggctatacctttataaacaactttcattcctacccc 18390971  T
Q  203 aaagaccaactcataaca 220  Q
    || |||||||||||||||    
T  18390970 aaggaccaactcataaca 18390953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 3539028 - 3539163
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagac-tcaccgaaagattataccttta 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| | ||||||||| |||||| |||| |||  |  |||   |||    
T  3539028 tatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaacaacattcatattaattcagacttcactgaacaacaatataatta 3539127  T
Q  180 taaacaacttccattcctaccccaaagaccaactca 215  Q
    |||||||||| |||||||||||||||||||||||||    
T  3539128 taaacaactttcattcctaccccaaagaccaactca 3539163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 83 - 219
Target Start/End: Original strand, 5985377 - 5985512
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||  | ||||||||||||||| || ||| ||| |||||||||| ||||||| |||||| ||  || | |||||  || ||||||||||    
T  5985377 tttctatatcatacctt-ttcacataatatatgaatttcacattaaccaacaacattaatcattttaacttaggttctctgaaaggctaaacctttataa 5985475  T
Q  183 acaacttccattcctaccccaaagaccaactcataac 219  Q
    |||||||||||||||||||||||||||||||||||||    
T  5985476 acaacttccattcctaccccaaagaccaactcataac 5985512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 25141185 - 25141289
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||   ||||||||||| |||| |||| | |||||||| ||||||  ||||  ||||    
T  25141185 tatttctatatcatataatattcacataatatatgtatctcaaattattcaacaacaatattcatgttaatttagactcactgaaagacaatacaattat 25141284  T
Q  181 aaaca 185  Q
    |||||    
T  25141285 aaaca 25141289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 6478026 - 6477919
Alignment:
Q  109 atatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagac 208  Q
    |||||| || || ||||| ||||||||||  ||| ||||||  | ||| |||| |||||  ||||||||||||||||||||||||||||||||||| |||    
T  6478026 atatatatagcttaaattaaccaacaacatcaattatattagtttagattcactgaaaggctatacctttataaacaacttccattcctaccccaaggac 6477927  T
Q  209 caactcat 216  Q
    ||||||||    
T  6477926 caactcat 6477919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 9784917 - 9784962
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  9784917 tatttctatatcatacaatattcacataatatatgtatctcaaatt 9784962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 215
Target Start/End: Complemental strand, 10897253 - 10897168
Alignment:
Q  130 caacaacaataatcatattaactcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactca 215  Q
    ||||||||||| ||||||||| |||||||||| ||||| | |||   ||||||||||||| | ||| |||||||||||||||||||    
T  10897253 caacaacaatattcatattaattcagactcactgaaagctaatataattataaacaactttccttcttaccccaaagaccaactca 10897168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 23069166 - 23069122
Alignment:
Q  82 atttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  23069166 atttctatatcataaaatattcacataatatatgtatctcaaatt 23069122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 11562908 - 11563042
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    |||||||||||||| |||||||||||||||||||||||||||||||   ||||||||||| ||||||||| |||||||||| ||||| | ||||| ||||    
T  11562908 tatttctatatcattcaatattcacataatatatgtatctcaaattagtcaacaacaatattcatattaattcagactcactgaaagctaataccattat 11563007  T
Q  181 aaacaacttccattcctaccccaaagaccaactca 215  Q
    ||||||||| |||||||||||||||||||||||||    
T  11563008 aaacaactttcattcctaccccaaagaccaactca 11563042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 13179433 - 13179570
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | ||||||||||||||||| |||||||| ||||||||||||||||||||||| | |||||||| |||||  |||||||||||||    
T  13179433 tttctatatcatacatttttcacataatatatgtagctcaaattaaccaacaacaataatcatattaatttagactcactgaaaggctatacctttataa 13179532  T
Q  183 acaacttccattcctaccccaaagaccaactcataaca 220  Q
    ||||||| |||||||| ||||| |||||||||||||||    
T  13179533 acaactttcattcctatcccaaggaccaactcataaca 13179570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 82 - 220
Target Start/End: Original strand, 16059520 - 16059658
Alignment:
Q  82 atttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttata 181  Q
    |||||||||||||||| | | |||||||||||||||| ||||| | |||||||||| ||||||| |||| ||| |||| | ||||| |||||||||| ||    
T  16059520 atttctatatcatacactttccacataatatatgtatttcaaaataaccaacaacattaatcattttaattcaaactctctgaaaggttatacctttgta 16059619  T
Q  182 aacaacttccattcctaccccaaagaccaactcataaca 220  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16059620 aacaacttccattcctaccccaaagaccaactcataaca 16059658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 82 - 220
Target Start/End: Original strand, 16044660 - 16044798
Alignment:
Q  82 atttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttata 181  Q
    |||||||||||||||| | | | |||||||||||||| ||||| | |||||||||| ||||||| |||| ||| |||| | ||||| |||||||||| ||    
T  16044660 atttctatatcatacactttccgcataatatatgtatttcaaaataaccaacaacattaatcattttaattcaaactctctgaaaggttatacctttgta 16044759  T
Q  182 aacaacttccattcctaccccaaagaccaactcataaca 220  Q
    |||||||| ||||||||||||||||||||| ||||||||    
T  16044760 aacaactttcattcctaccccaaagaccaattcataaca 16044798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 87 - 215
Target Start/End: Original strand, 20417374 - 20417502
Alignment:
Q  87 tatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataaacaa 186  Q
    ||||||||||| | | ||||||||||||||| |||||||| |||||||||| |||||||||||  | ||| |||| |||||  ||||| |||||||||||    
T  20417374 tatatcatacattttccacataatatatgtagctcaaattaaccaacaacattaatcatattagtttagattcactgaaaggctatacatttataaacaa 20417473  T
Q  187 cttccattcctaccccaaagaccaactca 215  Q
    ||||||  |||||||||||||||||||||    
T  20417474 cttccaaccctaccccaaagaccaactca 20417502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 11192226 - 11192313
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaaga 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||||||| |||||||||| ||||||    
T  11192226 tatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaatattcatattaattcagactcactgaaaga 11192313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 52338725 - 52338592
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | |||||||||||| || || ||||| ||||||||||  ||| |||||| || ||| |||| ||||   |||||||||||||    
T  52338725 tttctatatcatacattttccacataatatatatagcttaaattaaccaacaacatcaattatattagcttagattcactgaaaagctatacctttataa 52338626  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
    |||||||||||||||||||||| |||||||||||    
T  52338625 acaacttccattcctaccccaatgaccaactcat 52338592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 11562714 - 11562818
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||   ||||||||||| ||||||||| |||||||||| ||||||  ||||  ||||    
T  11562714 tatttctatatcatacaatattcacataatatatgtatctctaattattcaacaacaatattcatattaattcagactcactgaaagacaatacaattat 11562813  T
Q  181 aaaca 185  Q
    |||||    
T  11562814 aaaca 11562818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 17258988 - 17258854
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||  | |||| ||||| ||||||||| ||||||||||   || | ||||   ||||    
T  17258988 tatttctatatcatacaatattcacataatacatgtatcttaaattatctaacatcaatattcatattaattcagactcactacaaaactatataattat 17258889  T
Q  181 aaacaacttccattcctaccccaaagaccaactca 215  Q
     |||||||| |||||||||||||| ||||||||||    
T  17258888 gaacaacttacattcctaccccaaggaccaactca 17258854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 14818316 - 14818449
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | |||||||||||| || || ||||| ||||||||||  ||| ||||||  | ||| |||| ||||   |||||||||||||    
T  14818316 tttctatatcatacattttccacataatatatatagcttaaattaaccaacaacatcaattatattagtttagattcactgaaaagctatacctttataa 14818415  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
    |||||| |||||||||||||||||||||||||||    
T  14818416 acaactcccattcctaccccaaagaccaactcat 14818449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 220
Target Start/End: Original strand, 16050137 - 16050273
Alignment:
Q  82 atttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttata 181  Q
    |||||||||||||||| | | |||||||||||||||| ||||| | ||   ||||| ||||||| |||| ||| || | | ||||| |||||||||| ||    
T  16050137 atttctatatcatacactttccacataatatatgtatatcaaaataac---caacattaatcattttaattcaaacactctgaaaggttatacctttgta 16050233  T
Q  182 aacaacttccattcctac-cccaaagaccaactcataaca 220  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  16050234 aacatcttccattcctacacccaaagaccaactcataaca 16050273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 6155923 - 6155998
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcaga 156  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||   ||||||||||| ||||||||| |||||    
T  6155923 tatttctatatcatacaatattcacataacatatgtatctcaaattattcaacaacaatattcatattaattcaga 6155998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 17548311 - 17548174
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaa----ctcagactcaccgaaagattataccttt 178  Q
    ||||||||||||||| | | |||||||||||| || ||  |||| ||||||||||  ||| |||||||    || ||| |||| |||||  ||||| |||    
T  17548311 tttctatatcatacattttccacataatatatatagcttgaattaaccaacaacatcaattatattaattagcttagattcactgaaaggctatactttt 17548212  T
Q  179 ataaacaacttccattcctaccccaaagaccaactcat 216  Q
    |||||||||||||||||||||||||| |||||||||||    
T  17548211 ataaacaacttccattcctaccccaaggaccaactcat 17548174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 14441503 - 14441557
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  14441503 tatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaa 14441557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 17046497 - 17046551
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  17046497 tatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaa 17046551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 54876200 - 54876146
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  54876200 tatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaa 54876146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 19569086 - 19569041
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  19569086 tatttctatatcatacaatattcacataatatatgtatctcaaatt 19569041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 42353430 - 42353385
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  42353430 tatttctatatcatacaatattcacataatatatgtatctcaaatt 42353385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 11192416 - 11192470
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  11192416 tatttctatatcatacaatattcacataataaatgtatctcaaattatccaacaa 11192470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 17691522 - 17691468
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  |||||||    
T  17691522 tatttctatatcatacaatattcacataatatatgtatatcaaattatccaacaa 17691468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 126
Target Start/End: Complemental strand, 18700187 - 18700145
Alignment:
Q  84 ttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18700187 ttctatatcatacaatattcacataatatatgtatctcaaatt 18700145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 12470141 - 12470182
Alignment:
Q  85 tctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  12470141 tctatatcatacaatattcacataatatatgtatctcaaatt 12470182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 14671163 - 14671204
Alignment:
Q  85 tctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14671163 tctatatcatacaatattcacataatatatgtatctcaaatt 14671204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 14682662 - 14682703
Alignment:
Q  85 tctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14682662 tctatatcatacaatattcacataatatatgtatctcaaatt 14682703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 43889516 - 43889471
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  43889516 tatttctaaatcatacaatattcacataatatatgtatctcaaatt 43889471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 6156042 - 6156086
Alignment:
Q  82 atttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  6156042 atttctatatcatacaatattcacataacatatgtatctcaaatt 6156086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 215
Target Start/End: Complemental strand, 11850395 - 11850279
Alignment:
Q  103 cacataatatatgtatctcaaattgaccaacaacaataatcatattaa----ctcagactcaccgaaagattatacctttataaacaacttccattccta 198  Q
    ||||||||||||||| ||  |||| ||||||||||  ||| |||||||    || ||| |||| |||||  ||||||||||||||||||| |||||| ||    
T  11850395 cacataatatatgtagcttgaattaaccaacaacatcaattatattaattagcttagattcactgaaaggctatacctttataaacaactcccattctta 11850296  T
Q  199 ccccaaagaccaactca 215  Q
    ||||||| |||||||||    
T  11850295 ccccaaaaaccaactca 11850279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 216
Target Start/End: Original strand, 10550559 - 10550693
Alignment:
Q  82 atttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttata 181  Q
    |||||||||||||||| | | ||||||| |||| || || ||||| ||||||||||  ||| ||||||  | | | | || || ||  ||||| ||||||    
T  10550559 atttctatatcatacattttccacataaaatatatagcttaaattaaccaacaacatcaattatattagtttatattgactgagaggctatacttttata 10550658  T
Q  182 aacaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||||||||||||| ||||| |||||||||||    
T  10550659 aacaacttccattcctatcccaaggaccaactcat 10550693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 13519578 - 13519644
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatat 147  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||   ||||||||| | ||||||    
T  13519578 tatttctatatcatacgatattcacataatatatgtacctcaaattattcaacaacaacattcatat 13519644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 17685560 - 17685506
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    |||||||||||||||||||||||||||||||||||||| || ||||  |||||||    
T  17685560 tatttctatatcatacaatattcacataatatatgtatttctaattatccaacaa 17685506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 52213151 - 52213105
Alignment:
Q  170 tatacctttataaacaacttccattcctaccccaaagaccaactcat 216  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||||||    
T  52213151 tataccttcataaacaactttcatccctaccccaaagaccaactcat 52213105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 21618656 - 21618692
Alignment:
Q  180 taaacaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||||| |||||||||||||||||||||||||||    
T  21618656 taaacaactaccattcctaccccaaagaccaactcat 21618692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 36166805 - 36166841
Alignment:
Q  180 taaacaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||||| |||||||||||||||||||||||||||    
T  36166805 taaacaactaccattcctaccccaaagaccaactcat 36166841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 9511882 - 9511828
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    |||||||| | ||||| ||||||||||||||||||||| |||||||  |||||||    
T  9511882 tatttctacaacataccatattcacataatatatgtatttcaaattatccaacaa 9511828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 9519857 - 9519803
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    |||||||| | ||||| ||||||||||||||||||||| |||||||  |||||||    
T  9519857 tatttctacaacataccatattcacataatatatgtatttcaaattatccaacaa 9519803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 12158658 - 12158692
Alignment:
Q  182 aacaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||||||||||||||||||| |||||||||||    
T  12158658 aacaacttccattcctaccccaaggaccaactcat 12158692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 45531285 - 45531247
Alignment:
Q  177 ttataaacaacttccattcctaccccaaagaccaactca 215  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  45531285 ttatgaacaactttcattcctaccccaaagaccaactca 45531247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 13919554 - 13919590
Alignment:
Q  184 caacttccattcctaccccaaagaccaactcataaca 220  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  13919554 caacctccattcctaccccaaagatcaactcataaca 13919590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Complemental strand, 23395743 - 23395699
Alignment:
Q  171 atacctttataaacaacttccattcctaccccaaagaccaactca 215  Q
    ||||||||||||||||||| ||||| ||||||||  |||||||||    
T  23395743 atacctttataaacaactttcattcataccccaagaaccaactca 23395699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 127555 - 127418
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | ||||||||||||||||| |||||||| ||||||||||||||||||||||| | |||||||| |||||  |||||||||||||    
T  127555 tttctatatcatacatttttcacataatatatgtagctcaaattaaccaacaacaataatcatattaatttagactcactgaaaggctatacctttataa 127456  T
Q  183 acaacttccattcctaccccaaagaccaactcataaca 220  Q
    ||||||| |||||||| ||||| |||||||||||||||    
T  127455 acaactttcattcctatcccaaggaccaactcataaca 127418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 220
Target Start/End: Complemental strand, 20787 - 20648
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||||||| |||||||||| ||||||  || |  ||||    
T  20787 tatttctatatcatacaattttcacataatatatgtatctcaaattatccaactacaataatcatattaattcagactcactgaaagacaatgcaattat 20688  T
Q  181 aaacaacttccattcctaccccaaagaccaactcataaca 220  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  20687 aaacaactttcattcctaccccaaagaccaactcagaaca 20648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 2e-39; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 13302076 - 13302210
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||| | ||||||||||||  |||||||||| | ||||||||| ||||||||||| |||||||||| |||||| ||||| |||||    
T  13302076 tatttctatatcatacaatttccacataatatatagatctcaaattaaacaacaacaacaatcatattaattcagactcactgaaagactatacatttat 13302175  T
Q  181 aaacaacttccattcctaccccaaagaccaactca 215  Q
    || |||||||||||| |||||||||||||||||||    
T  13302176 aatcaacttccattcataccccaaagaccaactca 13302210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 85 - 215
Target Start/End: Original strand, 51476270 - 51476400
Alignment:
Q  85 tctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataaac 184  Q
    ||||||||||||| | | ||||||||||||||| || ||||| |||||||||| |||||||||||  | ||| |||| ||||| ||||||||||||||||    
T  51476270 tctatatcatacattttccacataatatatgtagcttaaattaaccaacaacattaatcatattagtttagattcactgaaaggttatacctttataaac 51476369  T
Q  185 aacttccattcctaccccaaagaccaactca 215  Q
    ||| | ||||| |||||||||||||||||||    
T  51476370 aacattcattcttaccccaaagaccaactca 51476400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 52983437 - 52983570
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | ||||||||||||||| || ||||| ||||||||||  ||| |||||| || ||| |||  ||||   |||||||||||||    
T  52983437 tttctatatcatacattttccacataatatatgtagcttaaattaaccaacaacatcaattatattagcttagattcagtgaaaagctatacctttataa 52983536  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
    |||||||||||||||||||||| |||||||||||    
T  52983537 acaacttccattcctaccccaaggaccaactcat 52983570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 18823898 - 18824031
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||| | | | |||||||||||| || || ||||| ||||||||||  ||| |||||| || ||| |||| |||||| ||| |||| ||||    
T  18823898 tttctatatcatatattttccacataatatatatagcttaaattaaccaacaacatcaattatattagcttagattcactgaaagactatgccttaataa 18823997  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||||||||||||||| || |||||||||||    
T  18823998 acaacttccattcctaccctaaggaccaactcat 18824031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 13528554 - 13528417
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaa----ctcagactcaccgaaagattataccttt 178  Q
    ||||||||||||||| | | |||||||||||| || ||  |||| ||||||||||  ||| |||||||    || ||| |||| |||||  ||||| |||    
T  13528554 tttctatatcatacattttccacataatatatatagcttgaattaaccaacaacatcaattatattaattagcttagattcactgaaaggctatactttt 13528455  T
Q  179 ataaacaacttccattcctaccccaaagaccaactcat 216  Q
    |||||||||||||||||||||||||| |||||||||||    
T  13528454 ataaacaacttccattcctaccccaaggaccaactcat 13528417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 14238369 - 14238324
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14238369 tatttctatatcatacaatattcacataatatatgtatctcaaatt 14238324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 42697012 - 42697148
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||  | |||||||||||||||||| ||| ||| | ||| |||| ||||||  | || | ||| || | |||||  || ||||||||||    
T  42697012 tttctatatcatacctt-ttcacataatatatgtatttcacattaatcaagaacattaatcagttcaatttagattctctgaaaggctaaacctttataa 42697110  T
Q  183 acaacttccattcctaccccaaagaccaactcataaca 220  Q
    |||||||||||||||||||||| || ||||||||||||    
T  42697111 acaacttccattcctaccccaaggatcaactcataaca 42697148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 51082511 - 51082556
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  51082511 tatttctatatcatacaatattcacataatatatgtatctcaaatt 51082556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 38887884 - 38887818
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatat 147  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||| | ||||||    
T  38887884 tatttctatatcatacaatattcacataatatatgtacctcaaattattcaacaacaacattcatat 38887818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 7052812 - 7052767
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  7052812 tatttctatatcatacaatattcacctaatatatgtatctcaaatt 7052767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 215
Target Start/End: Original strand, 18270553 - 18270689
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaa----ctcagactcaccgaaagattataccttt 178  Q
    ||||||||||||||| | | ||||||||||||||| ||  |||| ||||||||||  ||| |||||||    || ||| ||||  ||||  | |||||||    
T  18270553 tttctatatcatacattttccacataatatatgtagcttgaattaaccaacaacatcaattatattaattagcttagattcacgaaaaggctgtaccttt 18270652  T
Q  179 ataaacaacttccattcctaccccaaagaccaactca 215  Q
    ||||||||||||||||| ||||||||  |||||||||    
T  18270653 ataaacaacttccattcttaccccaagaaccaactca 18270689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 215
Target Start/End: Original strand, 18275207 - 18275343
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaa----ctcagactcaccgaaagattataccttt 178  Q
    ||||||||||||||| | | ||||||||||||||| ||  |||| ||||||||||  ||| |||||||    || ||| ||||  ||||  | |||||||    
T  18275207 tttctatatcatacattttccacataatatatgtagcttgaattaaccaacaacatcaattatattaattagcttagattcacgaaaaggctgtaccttt 18275306  T
Q  179 ataaacaacttccattcctaccccaaagaccaactca 215  Q
    ||||||||||||||||| ||||||||  |||||||||    
T  18275307 ataaacaacttccattcttaccccaagaaccaactca 18275343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 21240012 - 21239953
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaata 140  Q
    |||||||| | ||||||| ||||||||||||||||||| |||||||  ||||||| ||||    
T  21240012 tatttctacaacatacaacattcacataatatatgtatttcaaattatccaacaaaaata 21239953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 4596548 - 4596508
Alignment:
Q  95 acaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    |||||||||||||||||||||||| |||||||  |||||||    
T  4596548 acaatattcacataatatatgtatttcaaattatccaacaa 4596508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 7e-39; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 85 - 218
Target Start/End: Complemental strand, 20469884 - 20469751
Alignment:
Q  85 tctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataaac 184  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||| ||||||| |||| |||||||| | |||||  ||||| |||||||||    
T  20469884 tctatatcatacaatttccacataatatatgtatctcaaattaaccaacaacattaatcattttaattcagactctctgaaaggctatacatttataaac 20469785  T
Q  185 aacttccattcctaccccaaagaccaactcataa 218  Q
    ||||||| ||||| ||||||||||||||||||||    
T  20469784 aacttcctttcctgccccaaagaccaactcataa 20469751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 21618803 - 21618672
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    |||||||||||||||||||||||||||||||||| |||||||||||  ||||||| |||| ||||| ||| |||||||||| |||  |  | |   ||||    
T  21618803 tatttctatatcatacaatattcacataatatatttatctcaaattatccaacaagaatattcataataattcagactcactgaacaacaacataattat 21618704  T
Q  181 aaacaacttccattcctaccccaaagaccaact 213  Q
    |||||||||||||||||| ||||||||||||||    
T  21618703 aaacaacttccattccta-cccaaagaccaact 21618672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 22357718 - 22357585
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | |||||||||||| || || ||||| ||||||||||  ||| ||||||  | ||| |||| ||||   |||||||||||||    
T  22357718 tttctatatcatacattttccacataatatatatagcttaaattaaccaacaacatcaattatattagtttagattcactgaaaagctatacctttataa 22357619  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
    |||||||||||||||||||||| |||||||||||    
T  22357618 acaacttccattcctaccccaaggaccaactcat 22357585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 20565699 - 20565803
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   ||||||||| | ||||||||| |||||||||  ||||||  ||||  ||||    
T  20565699 tatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaacattcatattaattcagactcattgaaagacaatacaattat 20565798  T
Q  181 aaaca 185  Q
    |||||    
T  20565799 aaaca 20565803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 8952810 - 8952679
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | ||||  |||||| || || ||||| ||||||||||  ||| |||||| || ||| |||| |||||  |||||||||||||    
T  8952810 tttctatatcatacattttccaca--atatatatagcttaaattaaccaacaacatcaattatattagcttagattcactgaaaggctatacctttataa 8952713  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
    |||||||||||||||||||||| |||||||||||    
T  8952712 acaacttccattcctaccccaatgaccaactcat 8952679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 25250614 - 25250522
Alignment:
Q  128 accaacaacaataatcatattaactcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataaca 220  Q
    |||| ||||||||||||| |||| | ||| || |||||||  || ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25250614 accatcaacaataatcattttaatttagattctccgaaaggctaaacctttataaacaactttcattcctaccccaaagaccaactcataaca 25250522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 25314399 - 25314307
Alignment:
Q  128 accaacaacaataatcatattaactcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataaca 220  Q
    |||| ||||||||||||| |||| | ||| || |||||||  || ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25314399 accatcaacaataatcattttaatttagattctccgaaaggctaaacctttataaacaactttcattcctaccccaaagaccaactcataaca 25314307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 29914563 - 29914643
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcac 161  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||   |||| ||||| | ||||||||| ||||||||||    
T  29914563 tatttctatattatacaatattcgcataatatatgtatctcaaatcatccaaaaacaacattcatattaattcagactcac 29914643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 32608121 - 32608055
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatat 147  Q
    |||||||||||||||||||||||||||||||||||||||| |||||   ||||||||| | ||||||    
T  32608121 tatttctatatcatacaatattcacataatatatgtatctaaaattattcaacaacaacattcatat 32608055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 208
Target Start/End: Complemental strand, 21406447 - 21406320
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||| ||||||||||||||||||| ||||||||  ||||||||||  |||||||||    ||||||||| ||||| |||  | ||||  ||||  ||||    
T  21406447 tatttgtatatcatacaatattcacgtaatatatacatctcaaattacccaacaacatacttcatattaattcagattcattgtaagacaatacaattat 21406348  T
Q  181 aaacaacttccattcctaccccaaagac 208  Q
    | ||||||| ||||| ||||||||||||    
T  21406347 atacaactttcattcataccccaaagac 21406320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 36509573 - 36509507
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatat 147  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||   ||||||||| | ||||||    
T  36509573 tatttctatatcatacgatattcacataatatatgtacctcaaattattcaacaacaacattcatat 36509507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 18318978 - 18318942
Alignment:
Q  180 taaacaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||||| |||||||||||||||||||||||||||    
T  18318978 taaacaactaccattcctaccccaaagaccaactcat 18318942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 20565889 - 20565934
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    |||||||| | ||||||| ||||||||||||||||||| |||||||    
T  20565889 tatttctacaacatacaacattcacataatatatgtatttcaaatt 20565934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Original strand, 20572112 - 20572148
Alignment:
Q  184 caacttccattcctaccccaaagaccaactcataaca 220  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  20572112 caacctccattcctaccccaaagatcaactcataaca 20572148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 20766029 - 20765993
Alignment:
Q  180 taaacaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  20766029 taaacaactaccattccaaccccaaagaccaactcat 20765993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 23200301 - 23200257
Alignment:
Q  101 ttcacataatatatgtatctcaaattgaccaacaacaataatcat 145  Q
    |||||||||||||||||| ||| ||| |||||||||| |||||||    
T  23200301 ttcacataatatatgtatttcacattaaccaacaacattaatcat 23200257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 3e-38; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 15096448 - 15096316
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| | ||||||||| ||| |||||| ||||||  ||||  ||||    
T  15096448 tatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaacaacattcatattaattcaaactcactgaaagacaatacaattat 15096349  T
Q  181 aaacaacttccattcctaccccaaagaccaact 213  Q
    ||||||||| |||||||||||||| ||||||||    
T  15096348 aaacaactttcattcctaccccaaggaccaact 15096316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 211
Target Start/End: Complemental strand, 14219773 - 14219646
Alignment:
Q  84 ttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataaa 183  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||| | ||||||||| |||||||||| |||  |  |||  ||||||||    
T  14219773 ttctatatcatacaatattcacataatatatgtatctcaaattatccaacaacaacattcatattaattcagactcactgaacaacaatatatttataaa 14219674  T
Q  184 caacttccattcctaccccaaagaccaa 211  Q
    |||||| |||||||||||||||||||||    
T  14219673 caactttcattcctaccccaaagaccaa 14219646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 15139411 - 15139546
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaata-atcatattaactcagactcaccgaaagattataccttta 179  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||  ||||||||| |||||||||| ||||||  ||||  |||    
T  15139411 tatttctatatcatacaatgttcacataatatatgtatctcaaattatccaacaacaatatttcatattaattcagactcactgaaagacaatacaatta 15139510  T
Q  180 taaacaacttccattcctaccccaaagaccaactca 215  Q
    || ||||||| ||||||||||||||| |||||||||    
T  15139511 tagacaactttcattcctaccccaaaaaccaactca 15139546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 83 - 215
Target Start/End: Original strand, 11053922 - 11054054
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | ||||||||||||||| |||||||| |||||||||| || ||||||||  | ||| |||| | |||| |||||||||||||    
T  11053922 tttctatatcatacattttccacataatatatgtagctcaaattaaccaacaacattagtcatattagtttagattcactggaagactatacctttataa 11054021  T
Q  183 acaacttccattcctaccccaaagaccaactca 215  Q
    ||||||| |||||||||||||||||||||||||    
T  11054022 acaactttcattcctaccccaaagaccaactca 11054054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 19558088 - 19557954
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| | ||||||||| | |||||||| |||  |  |||   ||||    
T  19558088 tatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaacaacattcatattaatttagactcacggaacaacaatataattat 19557989  T
Q  181 aaacaacttccattcctaccccaaagaccaactca 215  Q
    ||||||||| ||||| |||||||||||||||||||    
T  19557988 aaacaactttcattcttaccccaaagaccaactca 19557954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 91 - 220
Target Start/End: Original strand, 4071024 - 4071153
Alignment:
Q  91 tcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataaacaacttc 190  Q
    ||||||||| | | |||||||||||||||||||||| |||||||||| ||||||| |||| |||||||| | |||||  ||||||||||||||||||||     
T  4071024 tcatacaatttcctcataatatatgtatctcaaattaaccaacaacattaatcattttaattcagactctctgaaaggctatacctttataaacaacttt 4071123  T
Q  191 cattcctaccccaaagaccaactcataaca 220  Q
    |||||  |||||||||| ||||||||||||    
T  4071124 cattctcaccccaaagatcaactcataaca 4071153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 15281553 - 15281690
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | |||||||||||||||  ||||| | |||||||||| ||||||| | || |||||||| | |||||  ||||||||| |||    
T  15281553 tttctatatcatacactttccacataatatatgtaattcaaaataaccaacaacattaatcatttaaattcagactctctgaaaggctatacctttgtaa 15281652  T
Q  183 acaacttccattcctaccccaaagaccaactcataaca 220  Q
    ||||||||||||| || |||||||||||||| ||||||    
T  15281653 acaacttccattcttatcccaaagaccaacttataaca 15281690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 13133320 - 13133216
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   || |||||||| ||||||||| |||||||||| ||||||  ||||  ||||    
T  13133320 tatttctatatcatacaatattcacataatatatgtatctcaaattattcagcaacaatattcatattaattcagactcactgaaagacaatacaattat 13133221  T
Q  181 aaaca 185  Q
    |||||    
T  13133220 aaaca 13133216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 16077610 - 16077744
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||  |||||||||| | ||||||||| ||| |||||| |||  |  |||   ||||    
T  16077610 tatttctatatcatacaatattcacataatacatgtatttcaaattatccaacaacaacattcatattaattcaaactcactgaacaacaatatgattat 16077709  T
Q  181 aaacaacttccattcctaccccaaagaccaactca 215  Q
    ||||||||| |||||||||| |||| |||||||||    
T  16077710 aaacaactttcattcctaccacaaataccaactca 16077744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 220
Target Start/End: Complemental strand, 48809292 - 48809153
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||  |||||| ||||| ||||||||| ||||||||||   |  |  |||   ||||    
T  48809292 tatttctatatcatacaatattcacatcatatatgtgtctcaaattacccaacatcaatattcatattaattcagactcactacacaacaatataattat 48809193  T
Q  181 aaacaacttccattcctaccccaaagaccaactcataaca 220  Q
     ||||||||| ||||||||||||| |||||||||| ||||    
T  48809192 gaacaacttctattcctaccccaatgaccaactcagaaca 48809153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 13133130 - 13132996
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||   ||||||| ||| ||||||||| ||||||||||   |  |  |||   ||||    
T  13133130 tatttatataccatacaatattcacataatatatgtatctcaaattattcaacaacgatattcatattaattcagactcactacacaacaatataattat 13133031  T
Q  181 aaacaacttccattcctaccccaaagaccaactca 215  Q
     ||||||||||||||||||||||| || |||||||    
T  13133030 gaacaacttccattcctaccccaaggatcaactca 13132996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 215
Target Start/End: Complemental strand, 3289582 - 3289446
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaa----ctcagactcaccgaaagattataccttt 178  Q
    ||||||||||||||| | | ||||||||||||||| ||  |||| ||||||||||  ||| |||||||    || ||| |||| |||||  |||||||||    
T  3289582 tttctatatcatacattttccacataatatatgtagcttgaattaaccaacaacatcaattatattaattagcttagattcactgaaaggctataccttt 3289483  T
Q  179 ataaacaacttccattcctaccccaaagaccaactca 215  Q
    ||||||||||||||||| ||||||||  |||||||||    
T  3289482 ataaacaacttccattcttaccccaagaaccaactca 3289446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 14258687 - 14258732
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14258687 tatttctatatcatacaatattcacataatatatgtatctcaaatt 14258732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 14929089 - 14929044
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  14929089 tatttctatatcatacaatattcacataatatatgtatctcaaatt 14929044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 15352555 - 15352510
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  15352555 tatttctatatcatacaatattcacataatatatgtatctcaaatt 15352510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 16460649 - 16460604
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16460649 tatttctatatcatacaatattcacataatatatgtatctcaaatt 16460604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 16579995 - 16580040
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16579995 tatttctatatcatacaatattcacataatatatgtatctcaaatt 16580040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 16585668 - 16585623
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16585668 tatttctatatcatacaatattcacataatatatgtatctcaaatt 16585623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 32301517 - 32301562
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  32301517 tatttctatatcatacaatattcacataatatatgtatctcaaatt 32301562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 1489988 - 1489934
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  |||||||    
T  1489988 tatttctatatcatacaatattcacataatatatgtatatcaaattatccaacaa 1489934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 21735173 - 21735127
Alignment:
Q  170 tatacctttataaacaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  21735173 tatacctttataaacaacttccattcctaccacaaagaccaactcat 21735127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 215
Target Start/End: Complemental strand, 8135862 - 8135750
Alignment:
Q  103 cacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataaacaacttccattcctacccc 202  Q
    |||||||||  ||||| |||| ||  |||||||||||| ||||||||| ||| |||||| | ||||  ||||  ||||| ||||||| ||||||||||||    
T  8135862 cacataataggtgtatttcaatttatccaacaacaatattcatattaattcatactcactgtaagacaatacaattatatacaactttcattcctacccc 8135763  T
Q  203 aaagaccaactca 215  Q
    |||| ||||||||    
T  8135762 aaagtccaactca 8135750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 20487782 - 20487823
Alignment:
Q  85 tctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  20487782 tctatatcttacaatattcacataatatatgtatctcaaatt 20487823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 13255914 - 13255959
Alignment:
Q  170 tatacctttataaacaacttccattcctaccccaaagaccaactca 215  Q
    |||||||||||||||||||||||||| ||||||||  |||||||||    
T  13255914 tatacctttataaacaacttccattcttaccccaagaaccaactca 13255959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 13256009 - 13256054
Alignment:
Q  170 tatacctttataaacaacttccattcctaccccaaagaccaactca 215  Q
    |||||||||||||||||||||||||| ||||||||  |||||||||    
T  13256009 tatacctttataaacaacttccattcttaccccaagaaccaactca 13256054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 33001252 - 33001303
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    ||||||||||||||| | ||||||||||||||||||||||||||  |||||||    
T  33001252 tttctatatcatacatt-ttcacataatatatgtatctcaaattatccaacaa 33001303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 9177568 - 9177525
Alignment:
Q  177 ttataaacaacttccattcctaccccaaagaccaactcataaca 220  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||||    
T  9177568 ttatatacaacctccattcctaccccaaagatcaactcataaca 9177525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 32434293 - 32434253
Alignment:
Q  95 acaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    |||||||||||||||||||||||| |||||||  |||||||    
T  32434293 acaatattcacataatatatgtatttcaaattatccaacaa 32434253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 48273600 - 48273636
Alignment:
Q  180 taaacaacttccattcctaccccaaagaccaactcat 216  Q
    |||||| || |||||||||||||||||||||||||||    
T  48273600 taaacagctaccattcctaccccaaagaccaactcat 48273636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 81 - 220
Target Start/End: Complemental strand, 136380 - 136241
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||||||| |||||||||| |||| |  ||    ||||    
T  136380 tatttctatatcatacaattttcacataatatatgtatctcaaattatccaactacaataatcatattaattcagactcactgaaaaacaatgtaattat 136281  T
Q  181 aaacaacttccattcctaccccaaagaccaactcataaca 220  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  136280 aaacaactttcattcctaccccaaagaccaactcagaaca 136241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 220
Target Start/End: Original strand, 109458 - 109593
Alignment:
Q  85 tctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataaac 184  Q
    |||| |||||||||| | |||||||||||||||||||||||| |||||||||| ||||||| |||| |||||||| | | |||  |||||||||||||||    
T  109458 tctacatcatacaatttccacataatatatgtatctcaaattaaccaacaacattaatcattttaattcagactctctgtaaggctatacctttataaac 109557  T
Q  185 aacttccattcctaccccaaagaccaactcataaca 220  Q
    |||||||||| ||||||||||| |||||||||||||    
T  109558 aacttccatttctaccccaaaggccaactcataaca 109593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 83 - 215
Target Start/End: Original strand, 59635 - 59771
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaa----ctcagactcaccgaaagattataccttt 178  Q
    ||||||||||||||| | | ||||||||||||||| ||  |||| ||||||||||  ||| |||||||    || ||| |||| |||||  |||||||||    
T  59635 tttctatatcatacattttccacataatatatgtagcttgaattaaccaacaacatcaattatattaattagcttagattcacggaaaggctataccttt 59734  T
Q  179 ataaacaacttccattcctaccccaaagaccaactca 215  Q
    ||||||||||||||||||||||||||  |||||||||    
T  59735 ataaacaacttccattcctaccccaagaaccaactca 59771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 3851 - 3717
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||  ||||||||| |  ||||||||| ||||| |||| ||||||  |||| ||| |    
T  3851 tatttctatatcatatattattcacataatatatgtatctcaaattatccaacaacattcttcatattaattcagattcactgaaagacaatacatttgt 3752  T
Q  181 aaacaacttccattcctaccccaaagaccaactca 215  Q
    |||| |||| |||||||||||||||||||||||||    
T  3751 aaacgactttcattcctaccccaaagaccaactca 3717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 24267061 - 24267190
Alignment:
Q  87 tatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataaacaa 186  Q
    ||||||||||| | |||||||||||||| || || ||||| ||||||||||  ||| |||||| || ||| |||| ||||| ||||||||||||||||||    
T  24267061 tatatcatacatttttcacataatatatatagcttaaattaaccaacaacatcaattatattagcttagattcactgaaaggttatacctttataaacaa 24267160  T
Q  187 cttccattcctaccccaaagaccaactcat 216  Q
    |||||||||||||||||| |||||||||||    
T  24267161 cttccattcctaccccaaggaccaactcat 24267190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 82 - 215
Target Start/End: Complemental strand, 6083550 - 6083417
Alignment:
Q  82 atttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttata 181  Q
    ||||||| | |||||||||||||||||||||||| || |||| ||  ||||||||| || ||| ||||| |||||||||  ||||||| ||||  |||||    
T  6083550 atttctacaacatacaatattcacataatatatgcatttcaatttatccaacaacattattcagattaattcagactcattgaaagataatacaattata 6083451  T
Q  182 aacaacttccattcctaccccaaagaccaactca 215  Q
    |||||||| ||||||||||| |||||||||||||    
T  6083450 aacaactttcattcctaccctaaagaccaactca 6083417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 83 - 211
Target Start/End: Complemental strand, 22212268 - 22212139
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatatta-actcagactcaccgaaagattatacctttata 181  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| || ||||||||   |||||||||| | ||||  || |  |||||    
T  22212268 tttctatatcatacaattttcacataatatatgtatctcaaattaaccaacaacattattcatattactttcagactcactgtaagacaatgcaattata 22212169  T
Q  182 aacaacttccattcctaccccaaagaccaa 211  Q
    ||| |||| |||||||||||||||||||||    
T  22212168 aacgactttcattcctaccccaaagaccaa 22212139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 23500916 - 23501050
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| ||||||||| ||||  |||| ||||||   | |   |||    
T  23500916 tatttctatatcatacaatattcacataatataagtatctcaaattatccaacaacaatattcatattaattcaggatcactgaaagacagtccaactat 23501015  T
Q  181 aaacaacttccattcctaccccaaagaccaactca 215  Q
    ||| ||||| || ||||||||||| ||||||||||    
T  23501016 aaataactttcactcctaccccaaggaccaactca 23501050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 13751114 - 13750981
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | |||||||||||| || || ||||| ||||||||||  ||| ||||||  | ||| | || |||||  |||||||||||||    
T  13751114 tttctatatcatacattttccacataatatatatagcttaaattaaccaacaacatcaattatattagtttagattaactgaaaggctatacctttataa 13751015  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
    |||||||||||||||||||| |||||||||||||    
T  13751014 acaacttccattcctacccctaagaccaactcat 13750981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 31735683 - 31735547
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||| ||| | | |||||||||||||||| ||||||| |||||||||| ||||||| |||| |||||||||| |||  |  |||   ||||||    
T  31735683 tttctatatcaaacattttccacataatatatgtatttcaaattaaccaacaacattaatcattttaattcagactcactgaaccacaatataattataa 31735584  T
Q  183 acaacttccattcctaccccaaagaccaactcataaca 220  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  31735583 acaactt-cattcctaccccaaagaccaactcagaaca 31735547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 23492072 - 23491974
Alignment:
Q  87 tatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataaaca 185  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||||||| | ||||||||| |||||||||| ||||||  ||||  |||||||||    
T  23492072 tatatcatacaatattcacataatatatgtatctcaaattattcaacaacaaaattcatattaattcagactcactgaaagacaatacaattataaaca 23491974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 23497670 - 23497572
Alignment:
Q  87 tatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataaaca 185  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||||||| | ||||||||| |||||||||| ||||||  ||||  |||||||||    
T  23497670 tatatcatacaatattcacataatatatgtatctcaaattattcaacaacaacattcatattaattcagactcactgaaagacaatacaattataaaca 23497572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 19773426 - 19773381
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  19773426 tatttctatatcatacaatattcacataatatatgtatctcaaatt 19773381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 23491888 - 23491843
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  23491888 tatttctatatcatacaatattcacataatatatgtatctcaaatt 23491843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 23497486 - 23497441
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  23497486 tatttctatatcatacaatattcacataatatatgtatctcaaatt 23497441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 19655946 - 19655892
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||  |||||||    
T  19655946 tatttctatatcatacaatattcacataatatatgtatctcgaattatccaacaa 19655892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 15705328 - 15705283
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  15705328 tatttttatatcatacaatattcacataatatatgtatctcaaatt 15705283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 22806168 - 22806213
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  22806168 tatttctatatcatacaatattcacataatatatgtatcttaaatt 22806213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 215
Target Start/End: Complemental strand, 5110515 - 5110399
Alignment:
Q  103 cacataatatatgtatctcaaattgaccaacaacaataatcatattaa----ctcagactcaccgaaagattatacctttataaacaacttccattccta 198  Q
    ||||||||||||||| ||  |||| ||||||||||  ||| |||||||    || ||| |||| |||||  ||||||||||||||||||| |||||| ||    
T  5110515 cacataatatatgtagcttgaattaaccaacaacatcaattatattaattagcttagattcactgaaaggctatacctttataaacaactcccattctta 5110416  T
Q  199 ccccaaagaccaactca 215  Q
    ||||||| |||||||||    
T  5110415 ccccaaaaaccaactca 5110399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 124
Target Start/End: Original strand, 23655673 - 23655716
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaa 124  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  23655673 tatttctatatcatacaatattcacataatatatgtacctcaaa 23655716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 16448471 - 16448435
Alignment:
Q  180 taaacaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||||| |||||||||||||||||||||||||||    
T  16448471 taaacaactaccattcctaccccaaagaccaactcat 16448435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 28947679 - 28947738
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaata 140  Q
    |||||||| | ||||||| ||||||||||||||||||| |||||||  ||||||| ||||    
T  28947679 tatttctacagcatacaacattcacataatatatgtatttcaaattatccaacaaaaata 28947738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 212
Target Start/End: Complemental strand, 5289874 - 5289761
Alignment:
Q  103 cacataatatatgtatctcaaattgaccaacaacaataatcatattaa----ctcagactcaccgaaagattatacctttataaacaacttccattccta 198  Q
    ||||||||||||||| ||  |||| ||||||||||  ||| |||||||    || ||| |||| |||||  ||||||||||||| |||||  ||||| ||    
T  5289874 cacataatatatgtagcttgaattaaccaacaacatcaattatattaattagcttagattcactgaaaggctatacctttataaccaactctcattctta 5289775  T
Q  199 ccccaaagaccaac 212  Q
    ||||||| ||||||    
T  5289774 ccccaaaaaccaac 5289761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 135
Target Start/End: Complemental strand, 17318825 - 17318785
Alignment:
Q  95 acaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    |||||||||||||||||||||||| |||||||  |||||||    
T  17318825 acaatattcacataatatatgtatttcaaattatccaacaa 17318785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 22376577 - 22376537
Alignment:
Q  180 taaacaacttccattcctaccccaaagaccaactcataaca 220  Q
    |||||||||  |||||||||||||| |||||||||||||||    
T  22376577 taaacaactctcattcctaccccaaggaccaactcataaca 22376537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 856 - 960
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||||||| |||||||||| ||||||  |||| |||||    
T  856 tatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaatattcatattaattcagactcactgaaagacaatacatttat 955  T
Q  181 aaaca 185  Q
    |||||    
T  956 aaaca 960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 84 - 216
Target Start/End: Complemental strand, 34150 - 34018
Alignment:
Q  84 ttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataaa 183  Q
    |||||||||||||| | | ||||||||||||||| |||||||| ||||||||||  ||| |||| |  | ||| |||| |||||| ||||||||||||||    
T  34150 ttctatatcatacattttccacataatatatgtaactcaaattaaccaacaacatcaattatatcagtttagattcactgaaagactatacctttataaa 34051  T
Q  184 caacttccattcctaccccaaagaccaactcat 216  Q
    |||||||||||||||||| ||||||||||||||    
T  34050 caacttccattcctacccgaaagaccaactcat 34018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 187412 - 187308
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||||||| |||||||||| ||||||  |||| |||||    
T  187412 tatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaatattcatattaattcagactcactgaaagacaatacatttat 187313  T
Q  181 aaaca 185  Q
    |||||    
T  187312 aaaca 187308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 4e-31; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 14629971 - 14630075
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||||||| |||||||||| ||||||  |||| |||||    
T  14629971 tatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaatattcatattaattcagactcactgaaagacaatacatttat 14630070  T
Q  181 aaaca 185  Q
    |||||    
T  14630071 aaaca 14630075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 4615826 - 4615693
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | ||||||||||||||| |||||||| ||||||||||  ||| |||| |  | ||| |||| || ||  |||||||||||||    
T  4615826 tttctatatcatacattttccacataatatatgtaactcaaattaaccaacaacatcaattatatgagtttagattcactgagaggctatacctttataa 4615727  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||||||||||||||||||||||||||||||    
T  4615726 acaacttccattcctaccccaaagaccaactcat 4615693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 14933201 - 14933068
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | ||||||| |||| || || ||||| ||||||||||  ||| |||||| || ||| |||| |||||  |||||||||||||    
T  14933201 tttctatatcatacattttccacataacatatatagcttaaattaaccaacaacatcaattatattagcttagattcactgaaaggctatacctttataa 14933102  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
    |||||||||||||||||||||| |||||||||||    
T  14933101 acaacttccattcctaccccaaggaccaactcat 14933068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 167
Target Start/End: Complemental strand, 16026851 - 16026765
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaag 167  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||   ||||||||||| ||||||||| |||||||||| |||||    
T  16026851 tatttctatatcacacaatattcacataatatatgtatctcaaattattcaacaacaatattcatattaattcagactcactgaaag 16026765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 20899520 - 20899387
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | |||||||||||| || || ||||| ||||||||||  ||| |||||| || ||| |||| ||||  || |||||||||||    
T  20899520 tttctatatcatacattttccacataatatatatagcttaaattaaccaacaacatcaattatattagcttagattcactgaaaagttgtacctttataa 20899421  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||| |||||||||||||| |||||||||||    
T  20899420 acaactttcattcctaccccaaggaccaactcat 20899387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 9638106 - 9638185
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactca 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   ||||||||| | ||||||||| |||||||||    
T  9638106 tatttctatatcatacaatattcacataatatatgtatctcaaattattcaacaacaacattcatattaattcagactca 9638185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 14942367 - 14942273
Alignment:
Q  122 aaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 216  Q
    ||||| ||||||||||  ||| |||||| || ||| |||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||    
T  14942367 aaattaaccaacaacatcaattatattagcttagattcactgaaaggctatacctttataaacaacttccattcctaccccaaggaccaactcat 14942273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 21061818 - 21061955
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||| ||| | | ||||||||| |||||  | ||| | |||||||||| | ||||| | || |||||||| | |||||   |||||||| |||    
T  21061818 tttctatatcaaacattttccacataataaatgtaattgaaaataaccaacaacattgatcatttaaattcagactctctgaaaggcaatacctttgtaa 21061917  T
Q  183 acaacttccattcctaccccaaagaccaactcataaca 220  Q
    |||||||||| |||||||||||||||||||||||||||    
T  21061918 acaacttccactcctaccccaaagaccaactcataaca 21061955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 27028027 - 27028156
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | |||||||||||| ||  | ||||| ||||||||||  ||| ||||||  | ||| |||| |||||  |||||||||||||    
T  27028027 tttctatatcatacattttccacataatatatatagtttaaattaaccaacaacatcaattatattagtttagattcactgaaaggctatacctttataa 27028126  T
Q  183 acaacttccattcctaccccaaagaccaac 212  Q
     ||||||||||||||||||||| |||||||    
T  27028127 ccaacttccattcctaccccaaggaccaac 27028156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 215
Target Start/End: Complemental strand, 2584971 - 2584835
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaa----ctcagactcaccgaaagattataccttt 178  Q
    ||||||||||||||| | | ||||||||||||||| ||  |||| ||||||||||  ||| |||||||    || ||| |||| ||||| ||||| ||||    
T  2584971 tttctatatcatacattttccacataatatatgtagcttgaattaaccaacaacatcaattatattaattagcttagattcactgaaaggttatatcttt 2584872  T
Q  179 ataaacaacttccattcctaccccaaagaccaactca 215  Q
    ||||||||||||||||| ||||||||  |||||||||    
T  2584871 ataaacaacttccattcttaccccaagaaccaactca 2584835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 215
Target Start/End: Original strand, 6511866 - 6512002
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaa----ctcagactcaccgaaagattataccttt 178  Q
    ||||||||||||||| | |  |||||||||||||| ||  |||| ||||||||||  ||| |||||||    || ||| |||| |||||| |||||||||    
T  6511866 tttctatatcatacattttctacataatatatgtagcttgaattaaccaacaacatcaattatattaattagcttagattcactgaaagactataccttt 6511965  T
Q  179 ataaacaacttccattcctaccccaaagaccaactca 215  Q
    |||||||| |||||||||||||||||  |||||||||    
T  6511966 ataaacaagttccattcctaccccaagaaccaactca 6512002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 53631190 - 53631136
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  53631190 tatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaa 53631136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 3485206 - 3485251
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3485206 tatttctatatcatacaatattcacataatatatgtatctcaaatt 3485251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 13446744 - 13446876
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||| ||||||| | ||||||||||||||||| ||  |||| ||||||||||  ||| |||| |  | ||| |||| |||||  |||||||||||||    
T  13446744 tttctatctcatacatttttcacataatatatgtagcttgaattaaccaacaacatcaattatatcagtttagattcactgaaaggctatacctttataa 13446843  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
     |||||| |||||||| |||||||||||||||||    
T  13446844 tcaactttcattccta-cccaaagaccaactcat 13446876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 16026673 - 16026628
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16026673 tatttctatatcatacaatattcacataatatatgtatctcaaatt 16026628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 216
Target Start/End: Original strand, 18229996 - 18230084
Alignment:
Q  128 accaacaacaataatcatattaactcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||||||  ||| ||||||  | ||| |||| |||||  |||||||||||||||||||| ||||||||||||||||||||||||||    
T  18229996 accaacaacatcaattatattagtttagattcactgaaaggctatacctttataaacaactttcattcctaccccaaagaccaactcat 18230084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 126
Target Start/End: Original strand, 19734587 - 19734626
Alignment:
Q  87 tatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19734587 tatatcatacaatattcacataatatatgtatctcaaatt 19734626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 54798663 - 54798627
Alignment:
Q  180 taaacaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||||| |||||||||||||||||||||||||||    
T  54798663 taaacaactaccattcctaccccaaagaccaactcat 54798627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 126
Target Start/End: Complemental strand, 33244011 - 33243968
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||  |||||||| |||||||||||||||||||    
T  33244011 tttctatatcataccttattcacacaatatatgtatctcaaatt 33243968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 14280524 - 14280557
Alignment:
Q  180 taaacaacttccattcctaccccaaagaccaact 213  Q
    ||||||||| ||||||||||||||||||||||||    
T  14280524 taaacaactaccattcctaccccaaagaccaact 14280557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 50160383 - 50160424
Alignment:
Q  179 ataaacaacttccattcctaccccaaagaccaactcataaca 220  Q
    ||||||||||  |||||||||||||| |||||||||||||||    
T  50160383 ataaacaactatcattcctaccccaaggaccaactcataaca 50160424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 8574778 - 8574742
Alignment:
Q  180 taaacaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  8574778 taaacaactaccattcctaccctaaagaccaactcat 8574742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1695 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold1695
Description:

Target: scaffold1695; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 651 - 785
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| | ||||| ||| |||||||||| |||  |  | |   | ||    
T  651 tatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaacaacattcataataattcagactcactgaacaacaacataataat 750  T
Q  181 aaacaacttccattcctaccccaaagaccaactca 215  Q
    ||||||||| |||||||||||||||||||||||||    
T  751 aaacaactttcattcctaccccaaagaccaactca 785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 2693 - 2555
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaa-ttgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttata 181  Q
    ||||||||||||||||| | |||||||||||||||||||||| || ||||||| || |||| || |||| |||||||| | |||||  ||||||||||||    
T  2693 tttctatatcatacaatttccacataatatatgtatctcaaaattaaccaacatcattaatgattttaattcagactctctgaaaggctatacctttata 2594  T
Q  182 aacaacttccattcctaccccaaagaccaactcataaca 220  Q
    |||||||||||||| ||||| | |||||||||| |||||    
T  2593 aacaacttccattcataccctacagaccaactcgtaaca 2555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 6912 - 7045
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | ||||||||||||||| || ||||| ||||||||||  ||| |||||| || | | |||| |||||  |||||||||||||    
T  6912 tttctatatcatacattttccacataatatatgtagcttaaattaaccaacaacatcaattatattagcttaaattcactgaaaggctatacctttataa 7011  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
    |||||||||||||||||||||| |||||||||||    
T  7012 acaacttccattcctaccccaaggaccaactcat 7045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 214
Target Start/End: Original strand, 10972 - 11099
Alignment:
Q  87 tatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataaacaa 186  Q
    ||||||||||| | | ||||||||||||||| |||||||| ||||||||||  ||| |||| |  | ||| |||| |||||  |||||||||||||||||    
T  10972 tatatcatacattttccacataatatatgtaactcaaattaaccaacaacatcaattatatcagtttagattcacggaaaggctatacctttataaacaa 11071  T
Q  187 cttccattcctaccccaaagaccaactc 214  Q
    ||||||||||||||||||||||||||||    
T  11072 cttccattcctaccccaaagaccaactc 11099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 28570 - 28701
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||| ||||||||| | |||||||||||||||||| ||| ||| |||||||||| ||||||| |||| | ||| || | |||||  || ||||||||||    
T  28570 tttctgtatcatacatt-ttcacataatatatgtatttcacattaaccaacaacattaatcattttaatttaga-tctctgaaaggctaaacctttataa 28667  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||||||||||||||||||||||||||||||    
T  28668 acaacttccattcctaccccaaagaccaactcat 28701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 402 - 535
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | |||||||||||| || || ||||| ||||||||||  ||| ||||||  | ||| | || |||||  |||||||||||||    
T  402 tttctatatcatacattttccacataatatatatagcttaaattaaccaacaacatcaattatattagtttagattaactgaaaggctatacctttataa 501  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
    |||||||||||||||||||| |||||||||||||    
T  502 acaacttccattcctacccctaagaccaactcat 535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 3327 - 3460
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | ||||||||||||||| || ||||| |||||||||   ||| ||||||| | ||| ||||  ||||  |||||||||||||    
T  3327 tttctatatcatacattttccacataatatatgtagcttaaattaaccaacaacgtcaattatattaatttagattcactaaaaggctatacctttataa 3426  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||| |||||||||||||| |||||||||||    
T  3427 acaactttcattcctaccccaacgaccaactcat 3460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 16893 - 16978
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaa 166  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||| || ||||||| ||||    
T  16893 tatttctatatcaaacaattttcacataatatatgtatctcaaattatccaacaacaataatcatattaattccgactcactgaaa 16978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 58; Significance: 2e-24; HSPs: 4)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 4833 - 4938
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||| | ||||||||| | ||||||||| |||||||||| ||||||  ||||  ||||    
T  4833 tatttatatattatacaatattcacataatatatgtatctcaaattaatcaacaacaacattcatattaattcagactcactgaaagacaatacaattat 4932  T
Q  181 aaacaa 186  Q
    ||||||    
T  4933 aaacaa 4938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 1680 - 1760
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcac 161  Q
    |||||||||||||||||||||||||||| |||||||||||||||||   ||||||||| | ||||||||| ||||||||||    
T  1680 tatttctatatcatacaatattcacatagtatatgtatctcaaattattcaacaacaacattcatattaattcagactcac 1760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 5023 - 5068
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  5023 tatttctatatcatacaatattcacataatatatgtatctcaaatt 5068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 1870 - 1915
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  1870 tatttctatatcatacaatattcacacaatatatgtatctcaaatt 1915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 103 - 220
Target Start/End: Complemental strand, 127158 - 127041
Alignment:
Q  103 cacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataaacaacttccattcctacccc 202  Q
    |||||||||||||||| ||| ||| |||||||||| ||||||| |||| | ||| || | |||||  || |||||||||||||||||||||||||||| |    
T  127158 cacataatatatgtatttcacattaaccaacaacattaatcattttaatttagattctctgaaaggctaaacctttataaacaacttccattcctaccgc 127059  T
Q  203 aaagaccaactcataaca 220  Q
    || |||||||||||||||    
T  127058 aaggaccaactcataaca 127041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 7632 - 7736
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||   ||||||||| | ||||||||| |||||||||| ||||||  ||||  ||||    
T  7632 tatttctatatcatacaatattcacataatatatgtatctcgaattattcaacaacaacattcatattaattcagactcactgaaagacaatacaattat 7731  T
Q  181 aaaca 185  Q
    |||||    
T  7732 aaaca 7736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 7823 - 7868
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||    
T  7823 tatttctatatcatacaatattcaaataatatatgtatatcaaatt 7868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 215
Target Start/End: Complemental strand, 4260 - 4158
Alignment:
Q  111 atatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagacca 210  Q
    ||||||||||||||||  |||||||||||  ||||||||| |||||||||| |||||| || |   ||||||||||||| ||||||||||||||||||||    
T  4260 atatgtatctcaaattatccaacaacaatcttcatattaattcagactcactgaaagactacaa--ttataaacaactttcattcctaccccaaagacca 4163  T
Q  211 actca 215  Q
    |||||    
T  4162 actca 4158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 215
Target Start/End: Complemental strand, 8820 - 8718
Alignment:
Q  111 atatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagacca 210  Q
    ||||||||||||||||  |||||||||||  ||||||||| |||||||||| |||||| || |   ||||||||||||| ||||||||||||||||||||    
T  8820 atatgtatctcaaattatccaacaacaatcttcatattaattcagactcactgaaagactacaa--ttataaacaactttcattcctaccccaaagacca 8723  T
Q  211 actca 215  Q
    |||||    
T  8722 actca 8718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 2750 - 2617
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | |||||||||||| || || ||||| ||||| ||||  ||  |||||| || ||| |||| ||| | ||||||||||||||    
T  2750 tttctatatcatacattttccacataatatatatagcttaaatttaccaagaacatcaaatatattagcttagattcactgaatggttatacctttataa 2651  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
    ||||| |||||||||||||||| |||||||||||    
T  2650 acaacatccattcctaccccaaggaccaactcat 2617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 6198 - 6331
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | ||||||| |||| || || ||||| ||||||||||  ||| |||||| || ||| |||| || ||  |||||||||||||    
T  6198 tttctatatcatacattttccacataaaatatatagcttaaattaaccaacaacatcaattatattagcttagattcactgagaggctatacctttataa 6297  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
    |||||||||||||| ||||||| |||||||||||    
T  6298 acaacttccattccaaccccaaggaccaactcat 6331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 8350 - 8483
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | ||||||| |||| || || ||||| ||||||||||  ||| |||||| || ||| |||| || ||  |||||||||||||    
T  8350 tttctatatcatacattttccacataaaatatatagcttaaattaaccaacaacatcaattatattagcttagattcactgagaggctatacctttataa 8449  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
    |||||||||||||| ||||||| |||||||||||    
T  8450 acaacttccattccaaccccaaggaccaactcat 8483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 3170 - 3303
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | | |||||||||| || || ||||| ||||||| ||  ||| |||||| || ||| |||| ||||   |||||||||||||    
T  3170 tttctatatcatacattttccccataatatatatagcttaaattaaccaacatcatcaattatattagcttagattcactgaaaagctatacctttataa 3269  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
     ||||||||||||||||||||| |||||||||||    
T  3270 tcaacttccattcctaccccaaggaccaactcat 3303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 146028 - 146085
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaa 138  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  146028 tatttctatatcatacaatattcacataatatatgtatctcaaattaatcaacaacaa 146085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 216
Target Start/End: Complemental strand, 1991 - 1903
Alignment:
Q  128 accaacaacaataatcatattaactcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||||||  ||| ||||||  | ||| |||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  1991 accaacaacatcaattatattagtttagattcactgaaaggctatacctttataaacaacttccattcctaccccaaagaccaactcat 1903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 1184 - 1130
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  1184 tatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaa 1130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 213
Target Start/End: Original strand, 5116 - 5246
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | ||||||| |||| || || ||||| |||||||||   ||| |||||| || ||| ||||  | ||  |||||||||||||    
T  5116 tttctatatcatacattttccacataaaatatatagcttaaattaaccaacaacgtcaattatattagcttagattcactaagaggctatacctttataa 5215  T
Q  183 acaacttccattcctaccccaaagaccaact 213  Q
    |||||||||||||||||||||| ||||||||    
T  5216 acaacttccattcctaccccaaggaccaact 5246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 15303 - 15249
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  15303 tatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaa 15249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 24361 - 24307
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  24361 tatttctatatcatacaatattcacataatatatgtatctcaaattatccaacaa 24307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 503 - 548
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  503 tatttctatatcatacaatattcacataatatatgtatctcaaatt 548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 519 - 655
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | ||||||||||||||| |||||||| |||||||||| ||||||| |||| ||| |||||| |||  |   ||   ||||||    
T  519 tttctatatcatacattttccacataatatatgtagctcaaatttaccaacaacattaatcat-ttaattcaaactcactgaaccacagtataattataa 617  T
Q  183 acaacttccattcctaccccaaagaccaactcataaca 220  Q
    ||||||| ||||| || |||||||||||||||| ||||    
T  618 acaactttcattcttatcccaaagaccaactcagaaca 655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 220
Target Start/End: Original strand, 8774 - 8910
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | ||||||||||||||| |||||||| |||||||||| ||||||| |||| ||| |||||| |||  |   ||   ||||||    
T  8774 tttctatatcatacattttccacataatatatgtagctcaaatttaccaacaacattaatcat-ttaattcaaactcactgaaccacagtataattataa 8872  T
Q  183 acaacttccattcctaccccaaagaccaactcataaca 220  Q
    ||||||| ||||| || |||||||||||||||| ||||    
T  8873 acaactttcattcttatcccaaagaccaactcagaaca 8910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 216
Target Start/End: Original strand, 4064 - 4125
Alignment:
Q  155 gactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||| |||||  ||||||||||||||||||||||||||||||||||| |||||||||||    
T  4064 gactcactgaaaggctatacctttataaacaacttccattcctaccccaaggaccaactcat 4125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 12802 - 12760
Alignment:
Q  177 ttataaacaacttccattcctaccccaaagaccaactcataac 219  Q
    ||||||||||||  |||||||||||||| ||||||||||||||    
T  12802 ttataaacaactctcattcctaccccaaggaccaactcataac 12760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 6848 - 6893
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6848 tatttctatatcatacaatattcacataatatatgtatctcaaatt 6893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 15266 - 15221
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  15266 tatttctatatcatacaatattcacataatatatgtatctcaaatt 15221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 29905 - 29950
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  29905 tatttctatatcatacaatattcacataatatatgtatctcaaatt 29950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 22353 - 22398
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  22353 tatttctatatcatacaatattcacataatatatgtatctcaaatt 22398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 33645 - 33690
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  33645 tatttctatatcatacaatattcacataatatatgtatctcaaatt 33690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 10686 - 10641
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  10686 tatttctatatcatacaatattcacataatatatgtatctcaaatt 10641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 29453 - 29498
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  29453 tatttctatatcatacaatattcacataatatatgtatctcaaatt 29498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 20987 - 21032
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  20987 tatttctatatcatacaatattcacataatatatgtatctcaaatt 21032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 220
Target Start/End: Complemental strand, 222 - 83
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttat 180  Q
    |||||||| | |||||||| | ||||||||| |||||| | || ||  |||||||||||| ||||||||| |||||||||| | ||||  ||||  ||||    
T  222 tatttctacaacatacaatttccacataatagatgtatttaaatttatccaacaacaatattcatattaattcagactcactgtaagacaatacaattat 123  T
Q  181 aaacaacttccattcctaccccaaagaccaactcataaca 220  Q
    | |||| || |  |||||||||||||||||||||| ||||    
T  122 atacaattttcgatcctaccccaaagaccaactcaaaaca 83  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 3754 - 3808
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    |||||||||||||||||||||||||||||||||||||| |||||||  |||||||    
T  3754 tatttctatatcatacaatattcacataatatatgtatttcaaattatccaacaa 3808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 147
Target Start/End: Original strand, 11455 - 11521
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatat 147  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||| | ||||||    
T  11455 tatttctatatcatacaatattcacataatatatgtacctcaaattattcaacaacaacattcatat 11521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 3981 - 4038
Alignment:
Q  92 catacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatatta 149  Q
    ||||||||||||||||||||||||||| |||||||  |||||||||||| ||||||||    
T  3981 catacaatattcacataatatatgtatttcaaattatccaacaacaatattcatatta 4038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 126
Target Start/End: Complemental strand, 6039 - 5998
Alignment:
Q  85 tctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  6039 tctatatcatacaatattcacataatatatgtatctcaaatt 5998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 11090 - 11135
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  11090 tatttctatgtcatacaatattcacataatatatgtatctcaaatt 11135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 7270 - 7315
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||    
T  7270 tatttccatatcatacaatattcacataatttatgtatctcaaatt 7315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 126
Target Start/End: Original strand, 3609 - 3650
Alignment:
Q  85 tctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3609 tctatatcatacaatattcacataatatatgtatctcaaatt 3650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 40985 - 40852
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | | ||||||| |||| || || ||||| ||||||||||  ||| ||||||  | | | | || || ||  ||||| |||||||    
T  40985 tttctatatcatacattttccacataaaatatatagcttaaattaaccaacaacatcaattatattagtttatattgactgagaggctatacttttataa 40886  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
    |||||||||||||||||||||| |||||||||||    
T  40885 acaacttccattcctaccccaaggaccaactcat 40852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 734 - 689
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  734 tatttctatgtcatacaatattcacataatatatgtatctcaaatt 689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 6037 - 5992
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||    
T  6037 tatttccatatcatacaatattcacataatttatgtatctcaaatt 5992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 21403 - 21448
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  21403 tatttctatatcataaaatattcacataatatatgtatctcaaatt 21448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 78357 - 78402
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  78357 tatttctataccatacaatattcacataatatatgtatctcaaatt 78402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 34564 - 34619
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaac 136  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||    
T  34564 tatttctatatcataaaatattcacataatacatgtatctcaaattatccaacaac 34619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 216
Target Start/End: Complemental strand, 397 - 264
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcagactcaccgaaagattatacctttataa 182  Q
    ||||||||||||||| | ||||||||| |||| || || ||||| ||||||||||  ||| ||||||  | | | | || || ||  ||||| |||||||    
T  397 tttctatatcatacatttttcacataaaatatatagcttaaattaaccaacaacatcaattatattagtttatattgactgagaggctatacttttataa 298  T
Q  183 acaacttccattcctaccccaaagaccaactcat 216  Q
    |||||||||||||||| || || |||||||||||    
T  297 acaacttccattcctatcctaaggaccaactcat 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 11541 - 11449
Alignment:
Q  128 accaacaacaataatcatattaactcagactcaccgaaagattatacctttataaacaacttccattcctaccccaaagaccaactcataaca 220  Q
    |||||||||| ||||||| |||| |||||||| | |||  |  |||   ||||||||||||| |||| |||||||||||||||||||||||||    
T  11541 accaacaacattaatcatcttaattcagactctctgaacaacaataatattataaacaactttcatttctaccccaaagaccaactcataaca 11449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 168772 - 168826
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    |||||| ||||||||||||||| ||||||||||||||| |||||||  |||||||    
T  168772 tatttcaatatcatacaatattaacataatatatgtatttcaaattatccaacaa 168826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 13382 - 13337
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    |||||||||||||||||||  ||| |||||||||||||||||||||    
T  13382 tatttctatatcatacaatcatcaaataatatatgtatctcaaatt 13337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 53 - 8
Alignment:
Q  170 tatacctttataaacaacttccattcctaccccaaagaccaactca 215  Q
    ||||||||||||||||||| |||||| ||||||||| |||||||||    
T  53 tatacctttataaacaactcccattcttaccccaaaaaccaactca 8  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 220
Target Start/End: Original strand, 30409 - 30446
Alignment:
Q  183 acaacttccattcctaccccaaagaccaactcataaca 220  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  30409 acaacttccattcctaccccaaagaccaactcacaaca 30446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 120245 - 120290
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaatt 126  Q
    ||||||||||||||| |||| ||| |||||||||||||||||||||    
T  120245 tatttctatatcataaaataatcaaataatatatgtatctcaaatt 120290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 116637 - 116673
Alignment:
Q  180 taaacaacttccattcctaccccaaagaccaactcat 216  Q
    ||||||||| |||||||||||||||||||||||||||    
T  116637 taaacaactaccattcctaccccaaagaccaactcat 116673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Original strand, 1270 - 1308
Alignment:
Q  182 aacaacttccattcctaccccaaagaccaactcataaca 220  Q
    |||||||| |||||||||||||| |||||||||||||||    
T  1270 aacaactttcattcctaccccaaggaccaactcataaca 1308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 25851 - 25905
Alignment:
Q  81 tatttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    |||||||| | ||||||| ||||||||||||||||||| |||||||  |||||||    
T  25851 tatttctacaacatacaacattcacataatatatgtatttcaaattatccaacaa 25905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 14514 - 14473
Alignment:
Q  178 tataaacaacttccattcctaccccaaagaccaactcataac 219  Q
    |||||||||||  |||||||||||||| ||||||||||||||    
T  14514 tataaacaactctcattcctaccccaaggaccaactcataac 14473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 2322 - 2286
Alignment:
Q  184 caacttccattcctaccccaaagaccaactcataaca 220  Q
    |||| |||||||||||||||| |||||||||||||||    
T  2322 caacctccattcctaccccaaggaccaactcataaca 2286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 2132 - 2193
Alignment:
Q  92 catacaatattcacataatatatgtatctcaaattgaccaacaacaataatcatattaactcag 155  Q
    ||||||||||||||||||||||||||| ||||  |  ||||| |||||| ||||||||| ||||    
T  2132 catacaatattcacataatatatgtatttcaa--tatccaacgacaatactcatattaaatcag 2193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 696 - 645
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    ||||||||||||||  | ||||||||||||||||||||||||||  |||||||    
T  696 tttctatatcatacctt-ttcacataatatatgtatctcaaattatccaacaa 645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 6000 - 5949
Alignment:
Q  83 tttctatatcatacaatattcacataatatatgtatctcaaattgaccaacaa 135  Q
    ||||||||||||||  | ||||||||||||||||||||||||||  |||||||    
T  6000 tttctatatcatacctt-ttcacataatatatgtatctcaaattatccaacaa 5949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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