View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10481A_low_509 (Length: 237)

Name: NF10481A_low_509
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10481A_low_509
NF10481A_low_509
[»] chr4 (42 HSPs)
chr4 (13-234)||(631327-631547)
chr4 (8-234)||(17048678-17048903)
chr4 (16-161)||(20160448-20160593)
chr4 (16-161)||(20157772-20157917)
chr4 (19-161)||(20163229-20163371)
chr4 (16-155)||(14954769-14954908)
chr4 (16-156)||(10712244-10712384)
chr4 (16-156)||(10926014-10926154)
chr4 (16-161)||(15224426-15224571)
chr4 (16-155)||(5757507-5757647)
chr4 (16-155)||(9555919-9556059)
chr4 (16-155)||(12487074-12487214)
chr4 (16-155)||(14758004-14758144)
chr4 (16-155)||(33741769-33741909)
chr4 (16-155)||(4561902-4562042)
chr4 (20-156)||(37018300-37018436)
chr4 (20-96)||(3484804-3484880)
chr4 (16-96)||(17809723-17809803)
chr4 (69-155)||(25689292-25689378)
chr4 (20-106)||(14548469-14548555)
chr4 (20-156)||(35812632-35812776)
chr4 (20-74)||(15042323-15042377)
chr4 (20-74)||(15112047-15112101)
chr4 (20-74)||(25090443-25090497)
chr4 (20-96)||(13592535-13592611)
chr4 (21-96)||(16997294-16997369)
chr4 (76-155)||(27533400-27533479)
chr4 (16-65)||(25689349-25689398)
chr4 (16-65)||(27533457-27533506)
chr4 (36-74)||(3484793-3484831)
chr4 (20-73)||(42874589-42874642)
chr4 (108-155)||(17807517-17807564)
chr4 (36-74)||(13592584-13592622)
chr4 (190-224)||(33185518-33185552)
chr4 (191-224)||(13592740-13592773)
chr4 (191-224)||(15042429-15042462)
chr4 (191-224)||(15111962-15111995)
chr4 (191-224)||(16997197-16997230)
chr4 (191-224)||(25090357-25090390)
chr4 (186-226)||(10712193-10712233)
chr4 (186-226)||(10925963-10926003)
chr4 (20-76)||(14650409-14650465)
[»] chr3 (62 HSPs)
chr3 (8-234)||(16795823-16796048)
chr3 (13-170)||(12852884-12853041)
chr3 (16-161)||(14665037-14665182)
chr3 (16-161)||(14668193-14668338)
chr3 (17-161)||(15464486-15464630)
chr3 (16-161)||(12339088-12339232)
chr3 (17-161)||(16750919-16751063)
chr3 (16-155)||(15964337-15964476)
chr3 (16-155)||(15968261-15968400)
chr3 (16-155)||(15972185-15972324)
chr3 (16-155)||(37440214-37440353)
chr3 (16-161)||(8489764-8489906)
chr3 (16-161)||(19774954-19775099)
chr3 (16-161)||(4589490-4589635)
chr3 (16-155)||(11069460-11069600)
chr3 (16-155)||(14498717-14498857)
chr3 (16-155)||(22321056-22321196)
chr3 (16-155)||(22336111-22336251)
chr3 (16-155)||(27410221-27410361)
chr3 (16-155)||(28949114-28949254)
chr3 (16-155)||(55022257-55022397)
chr3 (16-161)||(17317705-17317850)
chr3 (16-155)||(7109088-7109228)
chr3 (16-155)||(7113023-7113163)
chr3 (16-155)||(15616766-15616906)
chr3 (25-155)||(4107985-4108116)
chr3 (25-155)||(4111837-4111968)
chr3 (16-155)||(11166106-11166246)
chr3 (16-96)||(5222774-5222854)
chr3 (8-161)||(14670449-14670610)
chr3 (8-161)||(14681971-14682132)
chr3 (20-91)||(46821903-46821974)
chr3 (12-96)||(2842654-2842737)
chr3 (20-96)||(18700869-18700945)
chr3 (20-156)||(10543014-10543158)
chr3 (24-74)||(13543678-13543728)
chr3 (10-67)||(12120163-12120220)
chr3 (10-67)||(38962281-38962338)
chr3 (20-74)||(35353360-35353414)
chr3 (20-96)||(14441077-14441153)
chr3 (20-72)||(42353679-42353731)
chr3 (36-166)||(14440973-14441104)
chr3 (20-74)||(10562478-10562532)
chr3 (20-73)||(5214723-5214776)
chr3 (36-97)||(13520978-13521039)
chr3 (76-155)||(30065372-30065452)
chr3 (20-96)||(43890179-43890255)
chr3 (16-63)||(30065432-30065479)
chr3 (29-74)||(19884816-19884861)
chr3 (20-65)||(44269408-44269453)
chr3 (119-155)||(5220536-5220572)
chr3 (36-88)||(15565319-15565371)
chr3 (190-224)||(5214582-5214616)
chr3 (186-224)||(14670382-14670420)
chr3 (36-74)||(15565300-15565338)
chr3 (36-74)||(18700918-18700956)
chr3 (191-224)||(2842801-2842834)
chr3 (191-224)||(5214614-5214647)
chr3 (191-224)||(31414905-31414938)
chr3 (191-224)||(35353274-35353307)
chr3 (191-224)||(44269340-44269373)
chr3 (57-113)||(14067289-14067345)
[»] scaffold0124 (1 HSPs)
scaffold0124 (13-234)||(25170-25389)
[»] scaffold0165 (2 HSPs)
scaffold0165 (8-234)||(3043-3268)
scaffold0165 (8-234)||(7106-7331)
[»] scaffold0484 (1 HSPs)
scaffold0484 (20-234)||(172-385)
[»] chr7 (49 HSPs)
chr7 (13-222)||(18301625-18301833)
chr7 (8-155)||(20487186-20487333)
chr7 (16-161)||(12705236-12705381)
chr7 (16-161)||(13919072-13919217)
chr7 (16-164)||(25927818-25927968)
chr7 (16-155)||(45170608-45170747)
chr7 (16-161)||(2530731-2530876)
chr7 (16-161)||(2832774-2832919)
chr7 (16-161)||(15083555-15083700)
chr7 (16-161)||(1859401-1859546)
chr7 (16-161)||(39721625-39721770)
chr7 (16-161)||(18425044-18425189)
chr7 (16-161)||(26291756-26291901)
chr7 (16-155)||(71344-71484)
chr7 (16-155)||(75453-75593)
chr7 (16-155)||(16907788-16907928)
chr7 (16-155)||(18282755-18282895)
chr7 (16-155)||(32498-32638)
chr7 (16-155)||(12718057-12718197)
chr7 (16-155)||(12722968-12723108)
chr7 (16-155)||(16113630-16113770)
chr7 (16-155)||(16116783-16116923)
chr7 (16-155)||(18278792-18278932)
chr7 (20-96)||(24274799-24274875)
chr7 (76-161)||(7519677-7519762)
chr7 (20-156)||(16585087-16585231)
chr7 (8-81)||(15605861-15605934)
chr7 (20-95)||(16579257-16579332)
chr7 (20-95)||(16586330-16586405)
chr7 (24-96)||(14257924-14257996)
chr7 (20-80)||(16461500-16461560)
chr7 (20-96)||(20585203-20585279)
chr7 (10-67)||(15082314-15082370)
chr7 (100-155)||(12714353-12714408)
chr7 (36-156)||(14257823-14257951)
chr7 (20-74)||(14183819-14183873)
chr7 (36-74)||(14933118-14933156)
chr7 (36-74)||(15356553-15356591)
chr7 (36-74)||(15360667-15360705)
chr7 (36-74)||(24274788-24274826)
chr7 (20-74)||(32300804-32300858)
chr7 (20-73)||(12466473-12466526)
chr7 (99-156)||(32300747-32300804)
chr7 (36-74)||(20585192-20585230)
chr7 (191-224)||(14933278-14933311)
chr7 (191-224)||(15356713-15356746)
chr7 (191-224)||(15360827-15360860)
chr7 (191-224)||(15360871-15360904)
chr7 (191-224)||(38479733-38479766)
[»] chr1 (29 HSPs)
chr1 (8-224)||(48602804-48603018)
chr1 (8-224)||(22131449-22131663)
chr1 (8-161)||(41781867-41782020)
chr1 (16-155)||(1925731-1925870)
chr1 (16-155)||(20924745-20924884)
chr1 (17-160)||(41388597-41388740)
chr1 (20-153)||(33796911-33797044)
chr1 (16-161)||(39244496-39244641)
chr1 (16-161)||(39248051-39248196)
chr1 (16-156)||(16376035-16376176)
chr1 (16-161)||(20229584-20229729)
chr1 (16-161)||(21406740-21406885)
chr1 (16-155)||(1010112-1010252)
chr1 (16-155)||(52638930-52639070)
chr1 (24-167)||(23967332-23967483)
chr1 (20-96)||(42911818-42911894)
chr1 (20-96)||(14238695-14238775)
chr1 (20-74)||(19675542-19675596)
chr1 (26-96)||(48519948-48520018)
chr1 (20-74)||(20241618-20241672)
chr1 (36-74)||(14238748-14238786)
chr1 (36-74)||(42911807-42911845)
chr1 (186-224)||(48519682-48519720)
chr1 (190-226)||(4597165-4597201)
chr1 (36-96)||(48519915-48519975)
chr1 (190-224)||(48519786-48519820)
chr1 (191-224)||(42911721-42911754)
chr1 (191-224)||(48519818-48519851)
chr1 (191-224)||(51274834-51274867)
[»] scaffold0142 (1 HSPs)
scaffold0142 (13-224)||(8164-8373)
[»] chr8 (26 HSPs)
chr8 (8-224)||(44385215-44385430)
chr8 (16-161)||(21828616-21828761)
chr8 (16-156)||(18863247-18863387)
chr8 (8-161)||(23913655-23913808)
chr8 (16-155)||(30940679-30940818)
chr8 (16-161)||(21386717-21386862)
chr8 (16-161)||(14398425-14398568)
chr8 (16-161)||(21410309-21410454)
chr8 (16-161)||(21804801-21804946)
chr8 (16-155)||(21973158-21973298)
chr8 (16-155)||(21977249-21977389)
chr8 (16-155)||(22111320-22111460)
chr8 (16-155)||(43251200-43251340)
chr8 (20-142)||(16413760-16413882)
chr8 (20-96)||(32121453-32121529)
chr8 (20-96)||(42819107-42819183)
chr8 (36-166)||(5760107-5760237)
chr8 (26-96)||(18833091-18833161)
chr8 (36-74)||(32121442-32121480)
chr8 (20-76)||(19929978-19930034)
chr8 (177-224)||(18832974-18833020)
chr8 (36-74)||(37515200-37515238)
chr8 (36-74)||(42819156-42819194)
chr8 (191-224)||(42819247-42819280)
chr8 (186-226)||(21828790-21828830)
chr8 (186-226)||(30940924-30940964)
[»] scaffold0575 (1 HSPs)
scaffold0575 (8-161)||(6460-6613)
[»] scaffold0031 (1 HSPs)
scaffold0031 (16-161)||(36688-36833)
[»] chr6 (50 HSPs)
chr6 (16-161)||(22074563-22074708)
chr6 (16-161)||(23414289-23414434)
chr6 (8-146)||(2076871-2077009)
chr6 (16-161)||(1643894-1644039)
chr6 (16-161)||(31478561-31478706)
chr6 (16-155)||(11566251-11566391)
chr6 (16-155)||(12619419-12619559)
chr6 (16-155)||(22862335-22862475)
chr6 (16-155)||(23394457-23394597)
chr6 (16-155)||(14471603-14471742)
chr6 (16-161)||(16623738-16623883)
chr6 (16-155)||(8243222-8243362)
chr6 (16-155)||(23989309-23989449)
chr6 (16-155)||(19869978-19870119)
chr6 (36-155)||(16759626-16759746)
chr6 (16-156)||(27556065-27556192)
chr6 (69-155)||(22948506-22948592)
chr6 (69-155)||(22952462-22952548)
chr6 (69-155)||(23870950-23871036)
chr6 (69-155)||(23874906-23874992)
chr6 (20-74)||(34963069-34963123)
chr6 (20-149)||(22805370-22805507)
chr6 (20-156)||(19774060-19774204)
chr6 (20-87)||(23538235-23538302)
chr6 (20-74)||(23992126-23992180)
chr6 (20-73)||(17105354-17105407)
chr6 (24-96)||(17742851-17742923)
chr6 (20-96)||(19656621-19656697)
chr6 (20-79)||(27126606-27126665)
chr6 (20-95)||(15705936-15706011)
chr6 (76-155)||(18918013-18918092)
chr6 (16-70)||(27416503-27416557)
chr6 (31-88)||(16759727-16759784)
chr6 (16-65)||(22948563-22948612)
chr6 (16-65)||(22952519-22952568)
chr6 (16-65)||(23871007-23871056)
chr6 (16-65)||(23874963-23875012)
chr6 (20-74)||(7825435-7825489)
chr6 (36-161)||(19656762-19656888)
chr6 (36-95)||(15705985-15706044)
chr6 (16-59)||(18917986-18918029)
chr6 (172-225)||(17742613-17742665)
chr6 (53-106)||(19656746-19656799)
chr6 (36-96)||(17742818-17742878)
chr6 (190-229)||(17105121-17105160)
chr6 (36-74)||(17742807-17742845)
chr6 (36-74)||(19656695-19656733)
chr6 (36-73)||(23538216-23538253)
chr6 (36-96)||(20182380-20182440)
chr6 (36-96)||(22153551-22153611)
[»] chr2 (28 HSPs)
chr2 (8-161)||(9784394-9784547)
chr2 (16-161)||(1282772-1282917)
chr2 (16-161)||(31344522-31344666)
chr2 (16-155)||(41531582-41531721)
chr2 (16-155)||(30345593-30345732)
chr2 (16-155)||(24629056-24629196)
chr2 (16-155)||(27380009-27380149)
chr2 (16-155)||(27384055-27384195)
chr2 (16-155)||(27601181-27601321)
chr2 (16-155)||(10102230-10102370)
chr2 (16-155)||(24648744-24648884)
chr2 (8-96)||(32215385-32215472)
chr2 (16-113)||(12902093-12902190)
chr2 (20-96)||(17306255-17306331)
chr2 (11-67)||(38967084-38967140)
chr2 (10-67)||(24367446-24367503)
chr2 (20-74)||(28653710-28653764)
chr2 (21-74)||(24514976-24515029)
chr2 (26-96)||(36838972-36839042)
chr2 (36-74)||(32215445-32215483)
chr2 (186-232)||(357648-357694)
chr2 (36-74)||(17306244-17306282)
chr2 (191-224)||(7672749-7672782)
chr2 (191-224)||(17306158-17306191)
chr2 (191-224)||(24866069-24866102)
chr2 (191-224)||(28653817-28653850)
chr2 (191-224)||(36838875-36838908)
chr2 (186-226)||(1282703-1282743)
[»] chr5 (19 HSPs)
chr5 (16-161)||(11230505-11230650)
chr5 (16-153)||(18355609-18355746)
chr5 (16-161)||(11220107-11220252)
chr5 (16-161)||(11224693-11224838)
chr5 (16-161)||(11228516-11228661)
chr5 (16-155)||(40724193-40724332)
chr5 (16-156)||(20295235-20295376)
chr5 (16-161)||(10752576-10752719)
chr5 (16-161)||(15237412-15237556)
chr5 (16-141)||(11226546-11226671)
chr5 (69-169)||(22108009-22108109)
chr5 (69-161)||(20911531-20911623)
chr5 (69-161)||(24767898-24767990)
chr5 (69-155)||(19473315-19473401)
chr5 (8-73)||(22107981-22108046)
chr5 (16-65)||(19473295-19473344)
chr5 (16-64)||(20911511-20911559)
chr5 (20-74)||(33896117-33896171)
chr5 (16-65)||(24767878-24767927)
[»] scaffold0141 (2 HSPs)
scaffold0141 (16-155)||(14689-14828)
scaffold0141 (186-226)||(14934-14974)
[»] scaffold0016 (1 HSPs)
scaffold0016 (16-153)||(208190-208327)
[»] scaffold0012 (1 HSPs)
scaffold0012 (16-153)||(189979-190116)
[»] scaffold0601 (2 HSPs)
scaffold0601 (40-182)||(8090-8231)
scaffold0601 (20-96)||(8037-8113)
[»] scaffold1852 (1 HSPs)
scaffold1852 (16-156)||(93-234)
[»] scaffold0200 (1 HSPs)
scaffold0200 (16-161)||(11354-11499)
[»] scaffold0109 (3 HSPs)
scaffold0109 (16-161)||(36566-36711)
scaffold0109 (24-96)||(1063-1135)
scaffold0109 (36-74)||(1108-1146)
[»] scaffold0013 (1 HSPs)
scaffold0013 (16-156)||(73896-74036)
[»] scaffold0293 (1 HSPs)
scaffold0293 (16-164)||(20781-20933)
[»] scaffold0372 (1 HSPs)
scaffold0372 (16-155)||(5676-5816)
[»] scaffold0349 (1 HSPs)
scaffold0349 (16-155)||(11811-11951)
[»] scaffold0157 (1 HSPs)
scaffold0157 (16-155)||(33263-33403)
[»] scaffold0061 (3 HSPs)
scaffold0061 (16-155)||(67878-68018)
scaffold0061 (20-96)||(19613-19689)
scaffold0061 (37-74)||(19663-19700)
[»] scaffold0029 (3 HSPs)
scaffold0029 (16-155)||(66101-66240)
scaffold0029 (16-155)||(62185-62324)
scaffold0029 (16-161)||(79925-80071)
[»] scaffold0028 (1 HSPs)
scaffold0028 (16-155)||(59296-59436)
[»] scaffold0486 (2 HSPs)
scaffold0486 (16-161)||(9235-9381)
scaffold0486 (20-79)||(8201-8260)
[»] scaffold0525 (1 HSPs)
scaffold0525 (16-113)||(4446-4543)
[»] scaffold0205 (3 HSPs)
scaffold0205 (16-96)||(29261-29341)
scaffold0205 (36-74)||(29250-29288)
scaffold0205 (191-224)||(29075-29108)
[»] scaffold0494 (2 HSPs)
scaffold0494 (20-96)||(12705-12781)
scaffold0494 (36-74)||(12754-12792)
[»] scaffold0278 (2 HSPs)
scaffold0278 (36-165)||(7137-7274)
scaffold0278 (23-96)||(7247-7317)
[»] scaffold0023 (2 HSPs)
scaffold0023 (20-96)||(18059-18135)
scaffold0023 (36-74)||(18108-18146)
[»] scaffold0019 (1 HSPs)
scaffold0019 (16-74)||(28798-28856)
[»] scaffold0546 (2 HSPs)
scaffold0546 (24-96)||(10666-10738)
scaffold0546 (36-74)||(10655-10693)
[»] scaffold0166 (2 HSPs)
scaffold0166 (69-161)||(10395-10487)
scaffold0166 (16-65)||(10375-10424)
[»] scaffold0207 (6 HSPs)
scaffold0207 (23-96)||(15544-15617)
scaffold0207 (36-88)||(15689-15741)
scaffold0207 (36-96)||(15590-15650)
scaffold0207 (36-96)||(15656-15716)
scaffold0207 (36-96)||(15623-15683)
scaffold0207 (36-88)||(15722-15774)
[»] scaffold1662 (2 HSPs)
scaffold1662 (20-96)||(629-705)
scaffold1662 (36-74)||(678-716)
[»] scaffold0292 (2 HSPs)
scaffold0292 (36-156)||(4329-4449)
scaffold0292 (20-96)||(4422-4498)
[»] scaffold0203 (2 HSPs)
scaffold0203 (20-96)||(19270-19346)
scaffold0203 (36-74)||(19319-19357)
[»] scaffold0452 (1 HSPs)
scaffold0452 (20-95)||(13913-13988)
[»] scaffold0032 (1 HSPs)
scaffold0032 (20-96)||(63450-63526)
[»] scaffold0301 (1 HSPs)
scaffold0301 (20-74)||(10706-10760)
[»] scaffold0003 (1 HSPs)
scaffold0003 (16-70)||(70804-70858)
[»] scaffold0111 (5 HSPs)
scaffold0111 (20-96)||(20010-20086)
scaffold0111 (24-65)||(7093-7134)
scaffold0111 (24-65)||(14212-14253)
scaffold0111 (36-74)||(20059-20097)
scaffold0111 (191-224)||(20150-20183)
[»] scaffold0058 (2 HSPs)
scaffold0058 (24-96)||(832-904)
scaffold0058 (186-224)||(1016-1054)
[»] scaffold1633 (1 HSPs)
scaffold1633 (12-95)||(37-119)
[»] scaffold0040 (1 HSPs)
scaffold0040 (20-74)||(102305-102359)
[»] scaffold0034 (1 HSPs)
scaffold0034 (20-74)||(116619-116673)
[»] scaffold0299 (1 HSPs)
scaffold0299 (16-60)||(6426-6470)
[»] scaffold0096 (1 HSPs)
scaffold0096 (186-224)||(13269-13307)
[»] scaffold0074 (1 HSPs)
scaffold0074 (100-161)||(51314-51375)
[»] scaffold0073 (1 HSPs)
scaffold0073 (20-76)||(56610-56666)
[»] scaffold0863 (1 HSPs)
scaffold0863 (191-224)||(637-670)
[»] scaffold0359 (1 HSPs)
scaffold0359 (23-76)||(15154-15207)
[»] scaffold0077 (1 HSPs)
scaffold0077 (51-95)||(20943-20987)
[»] scaffold0005 (1 HSPs)
scaffold0005 (20-76)||(166827-166883)


Alignment Details
Target: chr4 (Bit Score: 182; Significance: 2e-98; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 13 - 234
Target Start/End: Original strand, 631327 - 631547
Alignment:
Q  13 gttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattcta 112  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  631327 gttgcatttgtcgagtcaaagtcattgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttgctgagttgtattcta 631426  T
Q  113 ctcatatgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatattgattc 212  Q
    | ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||| ||     
T  631427 cccatgtgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtc-aagttgcttatgacgattgctatgttggttatgatgttgtttg 631525  T
Q  213 tgatgttgttatatgatgttgt 234  Q
    ||||||||||||||||||||||    
T  631526 tgatgttgttatatgatgttgt 631547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 8 - 234
Target Start/End: Original strand, 17048678 - 17048903
Alignment:
Q  8 ttggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgta 107  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  17048678 ttggagtcgcatttgtcgattcaaagtcgttgttgatgaattatcatccacgagttgttaagttgttaacgaattatcatctatgagttgctgagttgta 17048777  T
Q  108 ttctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatatt 207  Q
    || ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  17048778 ttatacccatgtgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaa-ttgcttatgacgattgctatgttgtttatggtatt 17048876  T
Q  208 gattctgatgttgttatatgatgttgt 234  Q
    | || |||||||||||||| |||||||    
T  17048877 gtttgtgatgttgttatataatgttgt 17048903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 20160448 - 20160593
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||   ||||||| |||||| |    
T  20160448 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgaattgtcgagttgtcttctaccc 20160547  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||||||||||||||||||||| ||||    
T  20160548 atgtgttgttaaagaagtacctatgaagattatacgatgtttatga 20160593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 20157772 - 20157917
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   ||||||| |||||| |    
T  20157772 gcatttgtcgagtcaaactcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgagttgtcttctaccc 20157871  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||| ||||||||||||||||||||||||||| ||||    
T  20157872 atgtgttgttaaataagtacctatgaagattatacgatgtttatga 20157917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 20163229 - 20163371
Alignment:
Q  19 tttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcata 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   | ||||| ||||||  ||     
T  20163229 tttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgggttgtcttctacctatg 20163328  T
Q  119 tgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  20163329 tgttgttaaagaagtacctatgaagattatacgatgtttatga 20163371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 14954769 - 14954908
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||   ||||||| |||||| |    
T  14954769 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctataagttgtcgagttgtcttctaccc 14954868  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    || |||||||||||||||||||| ||||||||||||||||    
T  14954869 atgtgttgttaaagaagtacctacgaagattatacgatgt 14954908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 10712384 - 10712244
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||   ||||||| || ||| |    
T  10712384 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccacgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttttaccc 10712285  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  10712284 atgtgttgttaaagaagtacctatgaagattatacgatgtt 10712244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 10926154 - 10926014
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||   ||||||| || ||| |    
T  10926154 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccacgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttttaccc 10926055  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  10926054 atgtgttgttaaagaagtacctatgaagattatacgatgtt 10926014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 15224571 - 15224426
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| ||||||      
T  15224571 gcatttgtcgagtcaaggtcgctgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacct 15224472  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||| ||||||||||||||||| ||||    
T  15224471 atgtgttgttaaagaagtacctacgaagattatacgatgtttatga 15224426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 5757507 - 5757647
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  5757507 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 5757606  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  5757607 catgtgttgttaaagaagtacctacgaagattatacgatgt 5757647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 9556059 - 9555919
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  9556059 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 9555960  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  9555959 catgtgttgttaaagaagtacctacgaagattatacgatgt 9555919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 12487214 - 12487074
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  12487214 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 12487115  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  12487114 catgtgttgttaaagaagtacctacgaagattatacgatgt 12487074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 14758004 - 14758144
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  14758004 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 14758103  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  14758104 catgtgttgttaaagaagtacctacgaagattatacgatgt 14758144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 33741909 - 33741769
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  33741909 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 33741810  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  33741809 catgtgttgttaaagaagtacctacgaagattatacgatgt 33741769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 4561902 - 4562042
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  4561902 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgtcaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 4562001  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| || |||||||||||||    
T  4562002 catgtgttgttaaagaagtacctacgaggattatacgatgt 4562042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 37018436 - 37018300
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| || ||||  |||||||| |||||  ||  |    
T  37018436 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccataagttgttgagttgtcttctatccacgt 37018337  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    |||||| | ||||||| ||||||||||||| ||||||    
T  37018336 gttgttcatgaagtacttatgaagattatatgatgtt 37018300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 3484880 - 3484804
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| |||||||    
T  3484880 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagctgttaagttgttgttgaattatcatccatgagtt 3484804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 17809803 - 17809723
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||    
T  17809803 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtt 17809723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 25689378 - 25689292
Alignment:
Q  69 gttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||| |||||||||||||||||||||   ||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  25689378 gttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 25689292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 14548555 - 14548469
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgt 106  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||||||||| |||| || ||||| ||||||| || ||||||    
T  14548555 ttgtcgagtcaaagtcgttgttgatgagttgtcatccttgagttgttaagttgttgatgagttgtcatccatgagttgctaagttgt 14548469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 35812632 - 35812776
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatg--------agttactgagttgtattct 111  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||||||||| |||| || ||||| |||        ||||  |||||||| ||||    
T  35812632 ttgtcgagtcaaagtcgttgttgatgagtcgtcatccatgagttgttaagttgttgatgagttgtcatccatgaattgttaagttgttgagttgtcttct 35812731  T
Q  112 actcatatgttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    |  ||| ||||||||| ||||| | ||||||||||||| ||||||    
T  35812732 atccatgtgttgttaatgaagtgcttatgaagattatatgatgtt 35812776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 15042323 - 15042377
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  15042323 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgtt 15042377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 15112101 - 15112047
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  15112101 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgtt 15112047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 25090497 - 25090443
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  25090497 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgtt 25090443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 13592535 - 13592611
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||| |||||||||||||||||||||| |  |||||||||||||||||||||||| |||| || ||||| |||||||    
T  13592535 ttgttgagtcaaagtcgttgttgatgagtcgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtt 13592611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 16997369 - 16997294
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||| |||| || |||||||||||||||||||||||| |||| ||  |||| |||||||    
T  16997369 tgtcgagtcaaagtcgttgttaatgagttgtcatccatgagttgttaagttgttgatgagttgacatccatgagtt 16997294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 155
Target Start/End: Complemental strand, 27533479 - 27533400
Alignment:
Q  76 atgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||| |||||||   ||||||  |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  27533479 atgaattatcatccatgagttgtcgagttgcgttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 27533400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 25689398 - 25689349
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  25689398 gcatttgtcgagtcaaggtcgttgttgatgaattatcatctatgagttgt 25689349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 27533506 - 27533457
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  27533506 gcattcgtcgagtcaaagtcgttgtcgatgaattatcatccatgagttgt 27533457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 3484831 - 3484793
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  3484831 gttgttgttgaattatcatccatgagttgttaagttgtt 3484793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 42874642 - 42874589
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgt 73  Q
    ||||||| ||||||||||||||||||| || |||| ||||||||||| ||||||    
T  42874642 ttgtcgaatcaaagtcgttgttgatgagttgtcattcatgagttgttgagttgt 42874589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 155
Target Start/End: Complemental strand, 17807564 - 17807517
Alignment:
Q  108 ttctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||| ||| |||||||||||||||||||| ||||||| ||||||||    
T  17807564 ttctacccatgtgttgttaaagaagtacctacgaagattttacgatgt 17807517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 13592584 - 13592622
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  13592584 gttgttgatgagttgtcatccatgagttgttaagttgtt 13592622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Complemental strand, 33185552 - 33185518
Alignment:
Q  190 tatgttgtttatgatattgattctgatgttgttat 224  Q
    |||||||||||||||||||||| ||||||||||||    
T  33185552 tatgttgtttatgatattgattatgatgttgttat 33185518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 13592740 - 13592773
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  13592740 atgttgtttatgatattgattatgatgttgttat 13592773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 15042429 - 15042462
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  15042429 atgttgtttatgatattgattatgatgttgttat 15042462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 15111995 - 15111962
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  15111995 atgttgtttatgatattgattatgatgttgttat 15111962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 16997230 - 16997197
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  16997230 atgttgtttatgatattgattatgatgttgttat 16997197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 25090390 - 25090357
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  25090390 atgttgtttatgatattgattatgatgttgttat 25090357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 10712233 - 10712193
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttatat 226  Q
    ||||||||||||||| |||||||||| |||| |||||||||    
T  10712233 ttgctatgttgtttaagatattgattatgatattgttatat 10712193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 10926003 - 10925963
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttatat 226  Q
    ||||||||||||||| |||||||||| |||| |||||||||    
T  10926003 ttgctatgttgtttaagatattgattatgatattgttatat 10925963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 14650465 - 14650409
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaa 76  Q
    ||||||||||||||||||||| ||| | || | ||||||| ||||| ||||||||||    
T  14650465 ttgtcgagtcaaagtcgttgtcgataagtttttatccatgcgttgtcaagttgttaa 14650409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 179; Significance: 1e-96; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 8 - 234
Target Start/End: Complemental strand, 16796048 - 16795823
Alignment:
Q  8 ttggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgta 107  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  16796048 ttggagtcgcatttgtctagtcgaagtcgttgttgatgaattatcatccatgagttgttaagttattaatgaattatcatctatgagttgctgagttgta 16795949  T
Q  108 ttctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatatt 207  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  16795948 ttctactcatgtgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtc-aagttgcttatgacgattgctatgttgtttatgatgtt 16795850  T
Q  208 gattctgatgttgttatatgatgttgt 234  Q
    | || ||||||||||||||||| ||||    
T  16795849 gtttgtgatgttgttatatgattttgt 16795823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 12852884 - 12853041
Alignment:
Q  13 gttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattcta 112  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||| |||||    
T  12852884 gttgcatttgtcgagtcaaagttattgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctttgagtttcttagttgtcttcta 12852983  T
Q  113 ctcatatgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaa 170  Q
    | ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12852984 cccatgtgttgttaaagaagtacctatgaagattatacgatgttcatgacgtggtcaa 12853041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 14665182 - 14665037
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||   ||||||| |||||| |    
T  14665182 gcatttgtcgagtcaaagtcgttgttgatgaattatcattcatgagttgttaagttgttgatgaattatcatctatgagttgtcgagttgtcttctaccc 14665083  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||||||||||||||||||||| ||||    
T  14665082 atgtgttgttaaagaagtacctatgaagattatacgatgtttatga 14665037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 14668338 - 14668193
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   ||||| | |||||| |    
T  14668338 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgagttatcttctaccc 14668239  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||||||||||||||||||||| ||||    
T  14668238 atgtgttgttaaagaagtacctatgaagattatacgatgtttatga 14668193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 15464630 - 15464486
Alignment:
Q  17 catttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactca 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||   ||||||| |||||| ||    
T  15464630 catttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctacgagttgtcgagttgtcttctaccca 15464531  T
Q  117 tatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    | |||||||||||||||||||||||||||||||||||||| ||||    
T  15464530 tgtgttgttaaagaagtacctatgaagattatacgatgtttatga 15464486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 12339232 - 12339088
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||| |    
T  12339232 gcatttctcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagttgtcttctac-c 12339134  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||||||||||| ||||||||| ||||    
T  12339133 atgtgttgttaaagaagtacctatgaagattttacgatgtttatga 12339088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 16750919 - 16751063
Alignment:
Q  17 catttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactca 116  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  | |||||| ||||||  |    
T  16750919 catttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcaatgaattatcatctatgagttgttaagttgtcttctaccta 16751018  T
Q  117 tatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    | |||||||||||||||||||| ||||||||||||||||||||||    
T  16751019 tgtgttgttaaagaagtacctacgaagattatacgatgttcatga 16751063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 15964476 - 15964337
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  15964476 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccc 15964377  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    || |||||||||||||||||||| ||||||||||||||||    
T  15964376 atgtgttgttaaagaagtacctacgaagattatacgatgt 15964337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 15968400 - 15968261
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  15968400 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccc 15968301  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    || |||||||||||||||||||| ||||||||||||||||    
T  15968300 atgtgttgttaaagaagtacctacgaagattatacgatgt 15968261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 15972324 - 15972185
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  15972324 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccc 15972225  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    || |||||||||||||||||||| ||||||||||||||||    
T  15972224 atgtgttgttaaagaagtacctacgaagattatacgatgt 15972185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 37440214 - 37440353
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  37440214 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccc 37440313  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    || |||||||||||||||||||||||||||||||||||||    
T  37440314 atgtgttgttaaagaagtacctatgaagattatacgatgt 37440353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 8489764 - 8489906
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||   ||||||| |||||| |    
T  8489764 gcatttgtcgagtcaaagtcgttgttgatgaattttcatccatgagttgttaagttg---atgaattatcatctatgagttgtcgagttgtcttctaccc 8489860  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||||||||||||||||||||| ||||    
T  8489861 atgtgttgttaaagaagtacctatgaagattatacgatgtttatga 8489906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 19775099 - 19774954
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| ||||||      
T  19775099 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacct 19775000  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||| ||||||||||||||||| ||||    
T  19774999 atgtgttgttaaagaagtacctacgaagattatacgatgtttatga 19774954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 4589490 - 4589635
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||   ||||||| ||||||      
T  4589490 gcatttgtcgagtcaaagttgttgttgatgaattatcatctatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacct 4589589  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||| |||| |||||||||||| ||||    
T  4589590 atgtgttgttaaagaagtacctacgaaggttatacgatgtttatga 4589635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 11069600 - 11069460
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  11069600 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 11069501  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  11069500 catgtgttgttaaagaagtacctacgaagattatacgatgt 11069460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 14498857 - 14498717
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  14498857 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 14498758  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  14498757 catgtgttgttaaagaagtacctacgaagattatacgatgt 14498717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 22321196 - 22321056
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  22321196 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 22321097  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  22321096 catgtgttgttaaagaagtacctacgaagattatacgatgt 22321056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 22336251 - 22336111
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  22336251 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 22336152  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  22336151 catgtgttgttaaagaagtacctacgaagattatacgatgt 22336111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 27410221 - 27410361
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  27410221 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 27410320  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  27410321 catgtgttgttaaagaagtacctacgaagattatacgatgt 27410361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 28949254 - 28949114
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  28949254 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 28949155  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  28949154 catgtgttgttaaagaagtacctacgaagattatacgatgt 28949114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 55022397 - 55022257
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||||||||||     
T  55022397 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtattctacc 55022298  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||| ||||||||    
T  55022297 catgtgttgttaaagaagtacctacgaagattgtacgatgt 55022257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 17317705 - 17317850
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||  |||||||||||||||||||||   ||||||| ||||||      
T  17317705 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgaattgttaagtcgtcgatgaattatcatctatgagttgtcgagttgtcttctacct 17317804  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||||||||||||||||| | ||| ||||||||||||| ||||    
T  17317805 atatgttgttaaagaagtaccaacgaatattatacgatgtttatga 17317850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 7109228 - 7109088
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  7109228 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 7109129  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
     || |||||||||||||||||||| ||||||||||||||||    
T  7109128 tatgtgttgttaaagaagtacctacgaagattatacgatgt 7109088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 7113163 - 7113023
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  7113163 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 7113064  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
     || |||||||||||||||||||| ||||||||||||||||    
T  7113063 tatgtgttgttaaagaagtacctacgaagattatacgatgt 7113023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 15616906 - 15616766
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||| | ||||||     
T  15616906 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttatgttctacc 15616807  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  15616806 catgtgttgttaaagaagtacctacgaagattatacgatgt 15616766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 25 - 155
Target Start/End: Original strand, 4107985 - 4108116
Alignment:
Q  25 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatatgttg 123  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |||||    
T  4107985 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtcttctacccatgtgttg 4108084  T
Q  124 ttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||| ||||||||||||||||    
T  4108085 ttaaagaagtacctacgaagattatacgatgt 4108116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 25 - 155
Target Start/End: Original strand, 4111837 - 4111968
Alignment:
Q  25 gagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatatgttg 123  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| |||||    
T  4111837 gagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtcttctacccatgtgttg 4111936  T
Q  124 ttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||| ||||||||||||||||    
T  4111937 ttaaagaagtacctacgaagattatacgatgt 4111968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 11166106 - 11166246
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  11166106 gcatatgtcgattcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 11166205  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| ||||||||||||||||||||  |||||||||||||||    
T  11166206 catgtgttgttaaagaagtacctacaaagattatacgatgt 11166246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 5222854 - 5222774
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5222854 gcatttgtcgagtcaaagtcgttgttgataaattatcatccatgagttgttaagttgttgatgaattatcatctatgagtt 5222774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 161
Target Start/End: Complemental strand, 14670610 - 14670449
Alignment:
Q  8 ttggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatcta--------tgagttact 99  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | || || ||||| |        ||||||  |    
T  14670610 ttggagtcgcatttgtcgagtcaaagtcgttgttgatgaattgtcatccatgagttgttaagttgttgacgagttgtcatccatgagttgttgagttgtt 14670511  T
Q  100 gagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||| ||| || ||| ||||||||||||||||||||||||||||||| |||||| ||||    
T  14670510 gagttgtcttcaacccatgtgttgttaaagaagtacctatgaagattatatgatgtttatga 14670449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 8 - 161
Target Start/End: Complemental strand, 14682132 - 14681971
Alignment:
Q  8 ttggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatg--------agttact 99  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |  | || ||||| |||        ||||  |    
T  14682132 ttggagtcgcatttgtcgagtcaaagtcgttgttgatgaattgtcatgcatgagttgttaagttgttgacaagttgtcatccatgagttgttaagttgtt 14682033  T
Q  100 gagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||||||||| |||||| ||||    
T  14682032 gagttgtcttctacccatgtgttgttaaagaagtacctatgaagattatatgatgtttatga 14681971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 46821974 - 46821903
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctat 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||    
T  46821974 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttattgagttatcttctat 46821903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 2842654 - 2842737
Alignment:
Q  12 agttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| |||||||    
T  2842654 agttgcattt-tcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtt 2842737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 18700869 - 18700945
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| |||||||    
T  18700869 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtt 18700945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 10543014 - 10543158
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatga---gtta-----ctgagttgtattct 111  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| | ||   ||||      |||||||| ||||    
T  10543014 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccacgattcgttaaattgttgagttgtcttct 10543113  T
Q  112 actcatatgttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    || ||| ||||||||| ||||| | ||||||||||||| ||||||    
T  10543114 acccatgtgttgttaatgaagtgcttatgaagattatatgatgtt 10543158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 13543728 - 13543678
Alignment:
Q  24 cgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13543728 cgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 13543678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 12120163 - 12120220
Alignment:
Q  10 ggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgtta 67  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12120163 ggagtcgcatttgttgagtcaaagtcgttgttgatgaattatcatccatgagttgtta 12120220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 38962281 - 38962338
Alignment:
Q  10 ggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgtta 67  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38962281 ggagtcgcatttgtcgagtcaaagtcgttgttgatgaattatcattcatgagttgtta 38962338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 35353414 - 35353360
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  35353414 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgtt 35353360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 14441153 - 14441077
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||| ||||| || | ||||||||| |||||||||||| ||||||| ||||| |||||||    
T  14441153 ttgtcgagtcaaagtcgttgtcgatgagttgttatccatgagctgttaagttgttgatgaattgtcatccatgagtt 14441077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 42353679 - 42353731
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttg 72  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  42353679 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttg 42353731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 166
Target Start/End: Complemental strand, 14441104 - 14440973
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatc-atctatgagttactgagttgtattctactcatatgttgttaaagaagta 134  Q
    |||||||||||||| |||||||||||||||||||||||| ||   |  || ||| |||||||  |||||||| |||||  ||| |||||||||  ||||     
T  14441104 gttgttgatgaattgtcatccatgagttgttaagttgttgatttgtcttctatccatgagttgttgagttgtcttctatccatgtgttgttaataaagtg 14441005  T
Q  135 cctatgaagattatacgatgttcatgacgttg 166  Q
    | |||||||||||||||||||| |||| ||||    
T  14441004 cttatgaagattatacgatgtttatgatgttg 14440973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 10562532 - 10562478
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||||||||||| || ||||||||||||| ||||||||||    
T  10562532 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttattaagttgtt 10562478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 5214776 - 5214723
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgt 73  Q
    ||||||||||||||||||||||||||| || ||||||||||||| |||||||||    
T  5214776 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttattaagttgt 5214723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 13520978 - 13521039
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtta 97  Q
    |||||||||||||| |||||||||||||||||||||||| |||| || ||||| ||||||||    
T  13520978 gttgttgatgaattttcatccatgagttgttaagttgttgatgagttgtcatccatgagtta 13521039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 155
Target Start/End: Complemental strand, 30065452 - 30065372
Alignment:
Q  76 atgaattatcatctatgagttact-gagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||| |||||||  | |||| || |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  30065452 atgaattatcatccatgagtttgtcgagtggtgttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 30065372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 43890179 - 43890255
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||||| || |||||||||  ||||||||||||| | || || ||||| |||||||    
T  43890179 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatggattgttaagttgttgacgagttgtcatccatgagtt 43890255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 30065479 - 30065432
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagtt 63  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||    
T  30065479 gcatttgtcgagtcaaggtcgttgtcgatgaattatcatccatgagtt 30065432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 19884816 - 19884861
Alignment:
Q  29 caaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||| || ||||||||||||||||||||||||    
T  19884816 caaagtcgttgttgatgagttgtcatccatgagttgttaagttgtt 19884861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 44269453 - 44269408
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    ||||||||||||||||||||||||||| || |||||||||||||||    
T  44269453 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgt 44269408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 155
Target Start/End: Complemental strand, 5220572 - 5220536
Alignment:
Q  119 tgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||||||||||||||||||||| |||||    
T  5220572 tgttgttaaagaagtacctatgaagattatatgatgt 5220536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 15565371 - 15565319
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatc 88  Q
    |||||||||||||| |||||| |||||||||| |||||| ||||||| |||||    
T  15565371 gttgttgatgaattgtcatccgtgagttgttaggttgttgatgaattgtcatc 15565319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Complemental strand, 5214616 - 5214582
Alignment:
Q  190 tatgttgtttatgatattgattctgatgttgttat 224  Q
    |||||||||||||||||||||| ||||||||||||    
T  5214616 tatgttgtttatgatattgattatgatgttgttat 5214582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 14670420 - 14670382
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttat 224  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  14670420 ttgctatgttgtttatgatattgattatgatattgttat 14670382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 15565338 - 15565300
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  15565338 gttgttgatgaattgtcatccacgagttgttaagttgtt 15565300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 18700918 - 18700956
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  18700918 gttgttgatgagttgtcatccatgagttgttaagttgtt 18700956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 2842801 - 2842834
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  2842801 atgttgtttatgatattgattatgatgttgttat 2842834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 5214647 - 5214614
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  5214647 atgttgtttatgatattgattatgatgttgttat 5214614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 31414938 - 31414905
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  31414938 atgttgtttatgatattgattatgatgttgttat 31414905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 35353307 - 35353274
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  35353307 atgttgtttatgatattgattatgatgttgttat 35353274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 44269373 - 44269340
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  44269373 atgttgtttatgatattgattatgatgttgttat 44269340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 14067289 - 14067345
Alignment:
Q  57 atgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctac 113  Q
    |||||||||||||||||  ||||||||||||| |||||||   ||||||| ||||||    
T  14067289 atgagttgttaagttgtcgatgaattatcatccatgagttgtcgagttgtgttctac 14067345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 13 - 234
Target Start/End: Original strand, 25170 - 25389
Alignment:
Q  13 gttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattcta 112  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  25170 gttgcatttgtcgagtcaaagtcattgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctacgagttgctgagttgtattcta 25269  T
Q  113 ctcatatgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatattgattc 212  Q
    | ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||     
T  25270 cccatgtgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtc-aagttgc-tatgacgattgctatgttgtttatgatattgattg 25367  T
Q  213 tgatgttgttatatgatgttgt 234  Q
    |||||||||||| |||||||||    
T  25368 tgatgttgttatgtgatgttgt 25389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 175; Significance: 2e-94; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 8 - 234
Target Start/End: Complemental strand, 3268 - 3043
Alignment:
Q  8 ttggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgta 107  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||    
T  3268 ttggagtcacatttgtcgagtcaaagtcgttgttgatgaattatcatccatgtgttgctaagttgttaacgaattatcatctatgagttgctgagttgta 3169  T
Q  108 ttctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatatt 207  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  3168 ttctacccatgtgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtc-aagttgcttaggacgattgctatgttgtttatgatatt 3070  T
Q  208 gattctgatgttgttatatgatgttgt 234  Q
    | || ||||||||||||||||||||||    
T  3069 gtttgtgatgttgttatatgatgttgt 3043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 8 - 234
Target Start/End: Complemental strand, 7331 - 7106
Alignment:
Q  8 ttggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgta 107  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||    
T  7331 ttggagtcacatttgtcgagtcaaagtcgttgttgatgaattatcatccatgtgttgctaagttgttaacgaattatcatctatgagttgctgagttgta 7232  T
Q  108 ttctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatatt 207  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  7231 ttctacccatgtgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtc-aagttgcttaggacgattgctatgttgtttatgatatt 7133  T
Q  208 gattctgatgttgttatatgatgttgt 234  Q
    | || ||||||||||||||||||||||    
T  7132 gtttgtgatgttgttatatgatgttgt 7106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 20 - 234
Target Start/End: Complemental strand, 385 - 172
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||| ||| |    
T  385 ttgtcaagtcaatgtcgttgttgatgaattatcatccatgagttgtcaagttgttaatgaattatcatctatgagttgctgagttttattctacccatgt 286  T
Q  120 gttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatattgattctgatgtt 219  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  285 gttgttaaagaagtacctatgaagattatacgatgttcatgatgttgtc-aagttgcttatgacgattgctttgttgtttatgatattgattgtgatgtt 187  T
Q  220 gttatatgatgttgt 234  Q
    |||||||||||||||    
T  186 gttatatgatgttgt 172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 166; Significance: 6e-89; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 13 - 222
Target Start/End: Complemental strand, 18301833 - 18301625
Alignment:
Q  13 gttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattcta 112  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18301833 gttgtatttgtcgagtcaaagtcattgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttgctgagttgtattcta 18301734  T
Q  113 ctcatatgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatattgattc 212  Q
    | ||| ||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||     
T  18301733 cccatgtgttgttaaagaagtacctatgaagattacacgatgttcatgacgttgt-taagttgcttatgatgattgctatgttgtttatgatattgattg 18301635  T
Q  213 tgatgttgtt 222  Q
    ||||||||||    
T  18301634 tgatgttgtt 18301625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 8 - 155
Target Start/End: Complemental strand, 20487333 - 20487186
Alignment:
Q  8 ttggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgta 107  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||     
T  20487333 ttggagttgaatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagttgtc 20487234  T
Q  108 ttctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||| ||| ||||||||||||||||||||||||||||||| |||||    
T  20487233 ttctacccatgtgttgttaaagaagtacctatgaagattatatgatgt 20487186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 12705236 - 12705381
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  12705236 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccc 12705335  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||||||||||||||||||||| ||||    
T  12705336 atgtgttgttaaagaagtacctatgaagattatacgatgtttatga 12705381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 13919072 - 13919217
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  13919072 gcatctgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccc 13919171  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||||||||||||||||||||| ||||    
T  13919172 atgtgttgttaaagaagtacctatgaagattatacgatgtttatga 13919217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 25927818 - 25927968
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtta--atgaattatcatctatgagttactgagttgtattctac 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||  |||||||| ||||||    
T  25927818 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagtttttttgatgaattatcatctatgagttgttgagttgtcttctac 25927917  T
Q  114 tcatatgttgttaaagaagtacctatgaagattatacgatgttcatgacgt 164  Q
     ||| ||||||||||||||||||||||||||||||| |||||| |||||||    
T  25927918 ccatgtgttgttaaagaagtacctatgaagattatatgatgtttatgacgt 25927968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 45170608 - 45170747
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  45170608 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgttttctaccc 45170707  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    || |||||||||||||||||||| ||||||||||||||||    
T  45170708 atgtgttgttaaagaagtacctacgaagattatacgatgt 45170747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 2530731 - 2530876
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||   ||||||| |||||| |    
T  2530731 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgaattgttaagttgttgatgaattatcatctaagagttgtcgagttgtcttctaccc 2530830  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||| ||||||||||||||||||| ||||    
T  2530831 atgtgttgttaaagaagtacccatgaagattatacgatgtttatga 2530876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 2832774 - 2832919
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||   ||||||| ||||||      
T  2832774 gcatttgtcaagtcaaagtcgttgttgatgaattatcatccatgatttgttaagttgttgatgaattatcatctatgagttgtcgagttgtcttctacct 2832873  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||||||||||||||||||||| ||||    
T  2832874 atgtgttgttaaagaagtacctatgaagattatacgatgtttatga 2832919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 15083700 - 15083555
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||   ||||||| |||||| |    
T  15083700 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaaatatcatctatgagttgtcgagttgtcttctaccc 15083601  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||||||||||||||||||||| ||||    
T  15083600 atgtgttgttaaagaagtacctatgaagattatacgatgtttatga 15083555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 1859401 - 1859546
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||   ||||||| |||||| |    
T  1859401 gcatctgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctacgagttgtcgagttgttttctaccc 1859500  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || ||||||||||||||||||||||||| |||||||||||| ||||    
T  1859501 atgtgttgttaaagaagtacctatgaaggttatacgatgtttatga 1859546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 39721770 - 39721625
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||||| |||||||   ||||||| |||||| |    
T  39721770 gcatttgtcgagtcaaggtcgttgttaatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagttgtcgagttgtcttctaccc 39721671  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||||||||||||||||||||| ||||    
T  39721670 atgtgttgttaaagaagtacctatgaagattatacgatgtttatga 39721625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 18425189 - 18425044
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| ||||||      
T  18425189 gcatttgtcgagtcaaggtcgttgttgatgagttatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacct 18425090  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||| ||||||||||||||||| ||||    
T  18425089 atgtgttgttaaagaagtacctacgaagattatacgatgtttatga 18425044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 26291901 - 26291756
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| ||| ||      
T  26291901 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttccacct 26291802  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||| ||||||||||||||||| ||||    
T  26291801 atgtgttgttaaagaagtacctacgaagattatacgatgtttatga 26291756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 71344 - 71484
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  71344 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 71443  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  71444 catgtgttgttaaagaagtacctacgaagattatacgatgt 71484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 75453 - 75593
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  75453 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 75552  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  75553 catgtgttgttaaagaagtacctacgaagattatacgatgt 75593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 16907788 - 16907928
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  16907788 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 16907887  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  16907888 catgtgttgttaaagaagtacctacgaagattatacgatgt 16907928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 18282895 - 18282755
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  18282895 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 18282796  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  18282795 catgtgttgttaaagaagtacctacgaagattatacgatgt 18282755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 32638 - 32498
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  32638 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 32539  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
     || |||||||||||||||||||| ||||||||||||||||    
T  32538 tatgtgttgttaaagaagtacctacgaagattatacgatgt 32498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 12718197 - 12718057
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  12718197 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 12718098  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| | |||||||||||||||||| ||||||||||||||||    
T  12718097 catgtattgttaaagaagtacctacgaagattatacgatgt 12718057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 12723108 - 12722968
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  12723108 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 12723009  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| | |||||||||||||||||| ||||||||||||||||    
T  12723008 catgtattgttaaagaagtacctacgaagattatacgatgt 12722968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 16113770 - 16113630
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  16113770 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 16113671  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
     || |||||||||||||||||||| ||||||||||||||||    
T  16113670 tatgtgttgttaaagaagtacctacgaagattatacgatgt 16113630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 16116923 - 16116783
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  16116923 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 16116824  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
     || |||||||||||||||||||| ||||||||||||||||    
T  16116823 tatgtgttgttaaagaagtacctacgaagattatacgatgt 16116783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 18278932 - 18278792
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  18278932 gcatatgtcaagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 18278833  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  18278832 catgtgttgttaaagaagtacctacgaagattatacgatgt 18278792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 24274875 - 24274799
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  24274875 ttgtcgagtcaaagtcgttgttgaggaattatcatccatgagttgttaagttgttgatgaattatcatccatgagtt 24274799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 7519677 - 7519762
Alignment:
Q  76 atgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||||||||||||||||||   ||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  7519677 atgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctatgaagattatacgatgtttatga 7519762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 16585231 - 16585087
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatg--------agttactgagttgtattct 111  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| |||        ||||  |||||||| ||||    
T  16585231 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtcgttaagttgttgagttgtcttct 16585132  T
Q  112 actcatatgttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    || ||| ||||||||| ||||| | ||||||||||||| ||||||    
T  16585131 acccatgtgttgttaatgaagtgcttatgaagattatatgatgtt 16585087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 15605861 - 15605934
Alignment:
Q  8 ttggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaat 81  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||| ||||||    
T  15605861 ttggagtcgcatttgtcgagtcaaattcgttgttgatgaattatcatccatgagtttttgagttgttgatgaat 15605934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 16579332 - 16579257
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagt 95  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| ||||||    
T  16579332 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagt 16579257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 16586330 - 16586405
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagt 95  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| ||||||    
T  16586330 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagt 16586405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 14257996 - 14257924
Alignment:
Q  24 cgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||| | ||||| ||||| |||||||    
T  14257996 cgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgaggaattgtcatccatgagtt 14257924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 16461500 - 16461560
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaa 80  Q
    |||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  16461500 ttgttgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttaatgaa 16461560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 20585279 - 20585203
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||||| |||||||||| || |||||||||||||||||||||||| |||| || ||||| |||||||    
T  20585279 ttgtcgagtcaaagtcattgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtt 20585203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 15082314 - 15082370
Alignment:
Q  10 ggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgtta 67  Q
    ||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15082314 ggagtcgcacttgtcgagtcaaagtcgttgt-gatgaattatcatccatgagttgtta 15082370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 155
Target Start/End: Complemental strand, 12714408 - 12714353
Alignment:
Q  100 gagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  12714408 gagttgtgttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 12714353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 14257951 - 14257823
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatg--------agttactgagttgtattctactcatatgttgttaa 127  Q
    |||||||| ||||| |||||||||||||||||||||||| | ||||| ||||| |||        ||||  |||||||| |||||| ||| |||||||||    
T  14257951 gttgttgaggaattgtcatccatgagttgttaagttgttgacgaattgtcatccatgagttgttaagttgttgagttgtcttctacccatgtgttgttaa 14257852  T
Q  128 agaagtacctatgaagattatacgatgtt 156  Q
     ||||| | ||||||||||||| ||||||    
T  14257851 tgaagtgcttatgaagattatatgatgtt 14257823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 14183819 - 14183873
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||| ||||| | || ||||||||||||||||||||||||    
T  14183819 ttgtcgagtcaaagtcgtttttgattagttgtcatccatgagttgttaagttgtt 14183873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 14933118 - 14933156
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14933118 gttgttgatgaattatcatccatgagttgttaagttgtt 14933156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 15356553 - 15356591
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15356553 gttgttgatgaattatcatccatgagttgttaagttgtt 15356591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 15360667 - 15360705
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15360667 gttgttgatgaattatcatccatgagttgttaagttgtt 15360705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 24274826 - 24274788
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24274826 gttgttgatgaattatcatccatgagttgttaagttgtt 24274788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 32300858 - 32300804
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||| |||||||||||||||||||||| || |||||||||||| |||||||||||    
T  32300858 ttgttgagtcaaagtcgttgttgatgagttgtcatccatgagtcgttaagttgtt 32300804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 12466473 - 12466526
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgt 73  Q
    ||||||| |||||||| |||||||||| || |||||||||||||||||||||||    
T  12466473 ttgtcgaatcaaagtcattgttgatgagttgtcatccatgagttgttaagttgt 12466526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 32300804 - 32300747
Alignment:
Q  99 tgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    |||||||| |||||| ||| ||||||||| ||||| | ||||||||||||||||||||    
T  32300804 tgagttgtcttctacccatgtgttgttaatgaagtgcttatgaagattatacgatgtt 32300747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 20585230 - 20585192
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  20585230 gttgttgatgagttgtcatccatgagttgttaagttgtt 20585192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 14933278 - 14933311
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  14933278 atgttgtttatgatattgattatgatgttgttat 14933311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 15356713 - 15356746
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  15356713 atgttgtttatgatattgattatgatgttgttat 15356746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 15360827 - 15360860
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  15360827 atgttgtttatgatattgattatgatgttgttat 15360860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 15360871 - 15360904
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  15360871 atgttgtttatgatattgattatgatgttgttat 15360904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 38479766 - 38479733
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  38479766 atgttgtttatgatattgattatgatgttgttat 38479733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 165; Significance: 2e-88; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 8 - 224
Target Start/End: Complemental strand, 48603018 - 48602804
Alignment:
Q  8 ttggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgta 107  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||     
T  48603018 ttggagtcgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagctgttaatgaattatcatctatgagttgctgagttgtc 48602919  T
Q  108 ttctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatatt 207  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||    
T  48602918 ttctacccatgtgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtc-aagttgcttatgatg-ttgctatgttgtttatgatatt 48602821  T
Q  208 gattctgatgttgttat 224  Q
    |||| ||||||| ||||    
T  48602820 gattgtgatgttattat 48602804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 22131449 - 22131663
Alignment:
Q  8 ttggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgta 107  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||| |||     
T  22131449 ttggagtcgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagctgtc 22131548  T
Q  108 ttctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatatt 207  Q
     ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||    
T  22131549 atctacccatgtgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtc-aagttgcttatgatg-ttgctatgttgtttatgatatt 22131646  T
Q  208 gattctgatgttgttat 224  Q
    |||| ||||||||||||    
T  22131647 gattatgatgttgttat 22131663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 41781867 - 41782020
Alignment:
Q  8 ttggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgta 107  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||     
T  41781867 ttggagtcgcatttgtcgagtcaaagctgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagttgtc 41781966  T
Q  108 ttctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||| ||| ||||||||||||||||||||||||||||||| |||||| ||||    
T  41781967 ttctacccatgtgttgttaaagaagtacctatgaagattatatgatgtttatga 41782020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 1925731 - 1925870
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  1925731 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccc 1925830  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    || |||||||||||||||||||| ||||||||||||||||    
T  1925831 atgtgttgttaaagaagtacctacgaagattatacgatgt 1925870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 20924745 - 20924884
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  20924745 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccc 20924844  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    || |||||||||||||||||||| ||||||||||||||||    
T  20924845 atgtgttgttaaagaagtacctacgaagattatacgatgt 20924884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 160
Target Start/End: Original strand, 41388597 - 41388740
Alignment:
Q  17 catttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactca 116  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| ||||||  |    
T  41388597 catttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccta 41388696  T
Q  117 tatgttgttaaagaagtacctatgaagattatacgatgttcatg 160  Q
    | |||||||||||||||||||| |||||||||||||||||||||    
T  41388697 tgtgttgttaaagaagtacctacgaagattatacgatgttcatg 41388740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 20 - 153
Target Start/End: Complemental strand, 33797044 - 33796911
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||   ||||||| ||| || ||| |    
T  33797044 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgataaattatcatctatgagttgtcgagttgtcttccacccatgt 33796945  T
Q  120 gttgttaaagaagtacctatgaagattatacgat 153  Q
    ||| ||||||||||||||||||||||||||||||    
T  33796944 gttattaaagaagtacctatgaagattatacgat 33796911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 39244496 - 39244641
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    ||||||| ||||||      
T  39244496 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagtcgtcgagttgtcttctacct 39244595  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||| ||||||||||||||||| ||||    
T  39244596 atgtgttgttaaagaagtacctacgaagattatacgatgtttatga 39244641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 39248051 - 39248196
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    ||||||| ||||||      
T  39248051 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagtcgtcgagttgtcttctacct 39248150  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||| ||||||||||||||||| ||||    
T  39248151 atgtgttgttaaagaagtacctacgaagattatacgatgtttatga 39248196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 16376035 - 16376176
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  16376035 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 16376134  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    ||| |||||||||||||||||||| |||||||||||||||||    
T  16376135 catgtgttgttaaagaagtacctacgaagattatacgatgtt 16376176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 20229584 - 20229729
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||  |      
T  20229584 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttccgcct 20229683  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||| ||||||||||||||||| ||||    
T  20229684 atgtgttgttaaagaagtacctacgaagattatacgatgtttatga 20229729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 21406885 - 21406740
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |   ||||||| ||||||      
T  21406885 gcatttgtcgagttaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagctgtcgagttgtcttctacct 21406786  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||| ||||||||||||||||| ||||    
T  21406785 atgtgttgttaaagaagtacctacgaagattatacgatgtttatga 21406740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 1010252 - 1010112
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  1010252 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 1010153  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  1010152 catgtgttgttaaagaagtacctacgaagattatacgatgt 1010112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 52639070 - 52638930
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  52639070 gcatatgtcgagtcaatgtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 52638971  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  52638970 catgtgttgttaaagaagtacctacgaagattatacgatgt 52638930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 167
Target Start/End: Complemental strand, 23967483 - 23967332
Alignment:
Q  24 cgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt--------actgagttgtattctactc 115  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||  |||||| ||||| |||||||          |||||||| ||||||      
T  23967483 cgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgctgaattgtcatccatgagttgttaagtagttgagttgtcttctacat 23967384  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgt 167  Q
    || ||||||||| ||||||| |||||||||||||||||||| |||| |||||    
T  23967383 atgtgttgttaatgaagtacttatgaagattatacgatgtttatgatgttgt 23967332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 42911894 - 42911818
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||| ||||| |||||||    
T  42911894 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgaattgtcatccatgagtt 42911818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 14238695 - 14238775
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattat----catccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||||||||||    ||||||||||||||||||||||| ||||||||||||| |||||||    
T  14238695 ttgtcgagtcaaagtcgttgttgatgaattatatatcatccatgagttgttaagttgttgatgaattatcatccatgagtt 14238775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 19675596 - 19675542
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  19675596 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgtt 19675542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 48520018 - 48519948
Alignment:
Q  26 agtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||| ||||||||||| || |||||||||||||||||||||||| ||||||| ||||| |||||||    
T  48520018 agtcaaagttgttgttgatgagttgtcatccatgagttgttaagttgttgatgaattgtcatccatgagtt 48519948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 20241672 - 20241618
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||||||    
T  20241672 ttgtcgagtcaaagtcgttgttgatgagttgtcgtccatgagttgttaagttgtt 20241618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 14238748 - 14238786
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14238748 gttgttgatgaattatcatccatgagttgttaagttgtt 14238786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 42911845 - 42911807
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  42911845 gttgttgatgaattgtcatccatgagttgttaagttgtt 42911807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 48519720 - 48519682
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttat 224  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  48519720 ttgctatgttgtttatgatattgattatgatgttgttat 48519682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 4597165 - 4597201
Alignment:
Q  190 tatgttgtttatgatattgattctgatgttgttatat 226  Q
    |||||||||||||||||||||| ||||||||||||||    
T  4597165 tatgttgtttatgatattgattatgatgttgttatat 4597201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 48519975 - 48519915
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||| ||||||||||||||||| |||||| | || || ||||| |||||||    
T  48519975 gttgttgatgaattgtcatccatgagttgttaggttgttgacgagttgtcatccatgagtt 48519915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 224
Target Start/End: Complemental strand, 48519820 - 48519786
Alignment:
Q  190 tatgttgtttatgatattgattctgatgttgttat 224  Q
    |||||||||||||||||||||| ||||||||||||    
T  48519820 tatgttgtttatgatattgattatgatgttgttat 48519786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 42911754 - 42911721
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  42911754 atgttgtttatgatattgattatgatgttgttat 42911721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 48519851 - 48519818
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  48519851 atgttgtttatgatattgattatgatgttgttat 48519818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 51274834 - 51274867
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  51274834 atgttgtttatgatattgattatgatgttgttat 51274867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 13 - 224
Target Start/End: Original strand, 8164 - 8373
Alignment:
Q  13 gttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattcta 112  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||| |||||    
T  8164 gttgcatttgtcgagtcaaagtcattgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctttgagttgctaagttgtcttcta 8263  T
Q  113 ctcatatgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatattgattc 212  Q
    | ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||     
T  8264 cccatgtgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtc-aagttgcttatgatg-ttgctatgttgtttatgatattgatta 8361  T
Q  213 tgatgttgttat 224  Q
    ||||||| ||||    
T  8362 tgatgttattat 8373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 130; Significance: 2e-67; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 8 - 224
Target Start/End: Original strand, 44385215 - 44385430
Alignment:
Q  8 ttggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgta 107  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||  ||||||||     
T  44385215 ttggagtcgcatttgtcaagtcaaagtcgttgttgatgaattatcattcatgagttgttaagttgttaatgaattatcatctatgtgttgttgagttgtc 44385314  T
Q  108 ttctactcatatgttgttaaa-gaagtacctatgaagattatacgatgttcatgacgttgtcaaagttgcttatgacgattgctatgttgtttatgatat 206  Q
    |||||| ||| |||| ||||| | ||||||||||||||||||||||||||||||| |||||| ||||||||||||| | ||| |||||||||||||||||    
T  44385315 ttctacccatgtgttattaaagggagtacctatgaagattatacgatgttcatgatgttgtc-aagttgcttatgatg-ttgttatgttgtttatgatat 44385412  T
Q  207 tgattctgatgttgttat 224  Q
    ||||| ||||||| ||||    
T  44385413 tgattatgatgtttttat 44385430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 21828616 - 21828761
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  21828616 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccc 21828715  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||||||||||||||||||||| ||||    
T  21828716 atgtgttgttaaagaagtacctatgaagattatacgatgtttatga 21828761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 18863247 - 18863387
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  18863247 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccc 18863346  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  18863347 atgtgttgttaaagaagtacctatgaagattatacgatgtt 18863387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 8 - 161
Target Start/End: Complemental strand, 23913808 - 23913655
Alignment:
Q  8 ttggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgta 107  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  | | ||||     
T  23913808 ttggagtcgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttaatttgtc 23913709  T
Q  108 ttctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||| ||| ||||||||||||||||||||||||||||| | |||||| ||||    
T  23913708 ttctacccatgtgttgttaaagaagtacctatgaagattacatgatgtttatga 23913655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 30940679 - 30940818
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  30940679 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccc 30940778  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    || |||||||||||||||||||| ||||||||||||||||    
T  30940779 atgtgttgttaaagaagtacctacgaagattatacgatgt 30940818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 21386862 - 21386717
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||   ||||||| |||||| |    
T  21386862 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgataaattatcatctttgagttgtcgagttgtcttctaccc 21386763  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || ||||||||||||||||| ||| |||||||||||||||| ||||    
T  21386762 atgtgttgttaaagaagtacttataaagattatacgatgtttatga 21386717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 14398425 - 14398568
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||  ||||||   ||||||| |||||| |    
T  14398425 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgaattgttaagttgttgatgaattatcatc--tgagttgtcgagttgttttctaccc 14398522  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || ||||||||||||||||| |||||||||||||||||||| ||||    
T  14398523 atgtgttgttaaagaagtacatatgaagattatacgatgtttatga 14398568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 21410454 - 21410309
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||   ||||||| |||||| |    
T  21410454 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgatttatcatctatgagttgtcgagttgtcttctaccc 21410355  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || ||||||||||||||||||||||| ||||||| |||||| ||||    
T  21410354 atgtgttgttaaagaagtacctatgacgattatatgatgtttatga 21410309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 21804946 - 21804801
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||   ||||||| |||||| |    
T  21804946 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgatttatcatctatgagttgtcgagttgtcttctaccc 21804847  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || ||||||||||||||||||||||| ||||||| |||||| ||||    
T  21804846 atgtgttgttaaagaagtacctatgacgattatatgatgtttatga 21804801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 21973158 - 21973298
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  21973158 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 21973257  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| ||||||| |||||||||||||||||||||||||||||    
T  21973258 catgtgttgttgaagaagtacctatgaagattatacgatgt 21973298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 21977249 - 21977389
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  21977249 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 21977348  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| ||||||| |||||||||||||||||||||||||||||    
T  21977349 catgtgttgttgaagaagtacctatgaagattatacgatgt 21977389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 22111460 - 22111320
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||| | ||||||     
T  22111460 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttatgttctacc 22111361  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  22111360 catgtgttgttaaagaagtacctacgaagattatacgatgt 22111320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 43251340 - 43251200
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  43251340 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 43251241  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||| ||||||||    
T  43251240 catgtgttgttaaagaagtacctacgaagattgtacgatgt 43251200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 142
Target Start/End: Original strand, 16413760 - 16413882
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatat 119  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||| |||||||  | |||||| |||||  ||| |    
T  16413760 ttgtcgagtcaaagtcgttgttgatgaattatcatacatgagttattaagttgttgatgaattatcatccatgagttgttaagttgtcttctatccatgt 16413859  T
Q  120 gttgttaaagaagtacctatgaa 142  Q
    || ||||| ||||||| ||||||    
T  16413860 gtagttaatgaagtacttatgaa 16413882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 32121529 - 32121453
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  32121529 ttgtcgagtcaaagtcgttgttgaggaattatcatccatgagttgttaagttgttgatgaattatcatccatgagtt 32121453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 42819107 - 42819183
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||| |||| ||||||||||| || |||||||||||||||||||||||| |||| || ||||| |||||||    
T  42819107 ttgtcgagtccaagttgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtt 42819183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 166
Target Start/End: Complemental strand, 5760237 - 5760107
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatc----atctatgagttactgagttgtattctactcatatgttgttaaagaa 131  Q
    |||||||||||||| |||||||||||||||||||||||   ||| |||||    ||| |||||||  | |||||| |||||  ||| ||||||||| |||    
T  5760237 gttgttgatgaattgtcatccatgagttgttaagttgt---tgagttatcttctatccatgagtt-gttagttgtcttctatccatgtgttgttaatgaa 5760142  T
Q  132 gtacctatgaagattatacgatgttcatgacgttg 166  Q
    || | |||||||||||||||||||| |||| ||||    
T  5760141 gtgcttatgaagattatacgatgtttatgatgttg 5760107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 18833161 - 18833091
Alignment:
Q  26 agtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||| ||||||||||| || |||||||||||||||||||||||| | || || ||||| |||||||    
T  18833161 agtcaaagttgttgttgatgagttgtcatccatgagttgttaagttgttgacgagttgtcatccatgagtt 18833091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 32121480 - 32121442
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32121480 gttgttgatgaattatcatccatgagttgttaagttgtt 32121442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 19929978 - 19930034
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaa 76  Q
    |||||||||||||||||||||| || | || | ||||||||||||| ||||||||||    
T  19929978 ttgtcgagtcaaagtcgttgttaataagttgttatccatgagttgtcaagttgttaa 19930034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 18833020 - 18832974
Alignment:
Q  177 ttatgacgattgctatgttgtttatgatattgattctgatgttgttat 224  Q
    |||||||| ||| |||||||||||||||||||||| ||||||||||||    
T  18833020 ttatgacg-ttgttatgttgtttatgatattgattatgatgttgttat 18832974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 37515238 - 37515200
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  37515238 gttgttgatgaattgtcattcatgagttgttaagttgtt 37515200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 42819156 - 42819194
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  42819156 gttgttgatgagttgtcatccatgagttgttaagttgtt 42819194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 42819247 - 42819280
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  42819247 atgttgtttatgatattgattatgatgttgttat 42819280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 21828790 - 21828830
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttatat 226  Q
    ||||||||||||||| |||||||||| |||| |||||||||    
T  21828790 ttgctatgttgtttaagatattgattatgatattgttatat 21828830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 30940924 - 30940964
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttatat 226  Q
    ||||||||||||||| |||||||||| |||| |||||||||    
T  30940924 ttgctatgttgtttaagatattgattatgatattgttatat 30940964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 8 - 161
Target Start/End: Original strand, 6460 - 6613
Alignment:
Q  8 ttggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgta 107  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||     
T  6460 ttggagtcgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagttgtc 6559  T
Q  108 ttctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||| ||| ||||||||||||||||||||||||||||||| |||||| ||||    
T  6560 ttctacccatgtgttgttaaagaagtacctatgaagattatatgatgtttatga 6613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 36688 - 36833
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||| |||||| |    
T  36688 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagttgtcttctaccc 36787  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || ||||||||||||||||||||||||||||||| |||||| ||||    
T  36788 atgtgttgttaaagaagtacctatgaagattatatgatgtttatga 36833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 1e-55; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 22074563 - 22074708
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   ||||| | |||||| |    
T  22074563 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgagttatcttctaccc 22074662  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||||||||||||||||||||| ||||    
T  22074663 atgtgttgttaaagaagtacctatgaagattatacgatgtttatga 22074708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 23414434 - 23414289
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  23414434 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccc 23414335  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||||||||||||||||||||| ||||    
T  23414334 atgtgttgttaaagaagtacctatgaagattatacgatgtttatga 23414289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 2077009 - 2076871
Alignment:
Q  8 ttggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgta 107  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||  ||||||||     
T  2077009 ttggagtcgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgttgagttgtc 2076910  T
Q  108 ttctactcatatgttgttaaagaagtacctatgaagatt 146  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  2076909 ttctacccatgtgttgttaaagaagtacctatgaagatt 2076871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 1644039 - 1643894
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| ||| ||      
T  1644039 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttccacct 1643940  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||| ||||||||||||||||| ||||    
T  1643939 atgtgttgttaaagaagtacctacgaagattatacgatgtttatga 1643894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 31478561 - 31478706
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| ||||||      
T  31478561 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacct 31478660  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || ||||||||||||||||| || ||||||||||||||||| ||||    
T  31478661 atgtgttgttaaagaagtacatacgaagattatacgatgtttatga 31478706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 11566391 - 11566251
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  11566391 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 11566292  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  11566291 catgtgttgttaaagaagtacctacgaagattatacgatgt 11566251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 12619419 - 12619559
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  12619419 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 12619518  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  12619519 catgtgttgttaaagaagtacctacgaagattatacgatgt 12619559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 22862475 - 22862335
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  22862475 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 22862376  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  22862375 catgtgttgttaaagaagtacctacgaagattatacgatgt 22862335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 23394597 - 23394457
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  23394597 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 23394498  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  23394497 catgtgttgttaaagaagtacctacgaagattatacgatgt 23394457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 14471742 - 14471603
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||  ||||||||||||| ||||||    ||||||| |||||| |    
T  14471742 gcatttgtcgagtcaaagtcgttgttgatgaactatcatctatgagttgttaagttgtcgatgaattatcatccatgagtcgtcgagttgtgttctaccc 14471643  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    || |||||||||||||||||||| ||||||||||||||||    
T  14471642 atgtgttgttaaagaagtacctacgaagattatacgatgt 14471603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 16623883 - 16623738
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    ||||||| ||||||      
T  16623883 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagtcgtcgagttgtcttctacct 16623784  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||| ||||||||| ||| ||||||||||||| ||||    
T  16623783 atgtgttgttaaaaaagtacctacgaaaattatacgatgtttatga 16623738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 8243362 - 8243222
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  8243362 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 8243263  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||| ||||||||    
T  8243262 catgtgttgttaaagaagtacctacgaagattttacgatgt 8243222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 23989449 - 23989309
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  23989449 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 23989350  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||  ||||||||||||||||    
T  23989349 catgtgttgttaaagaagtacctgcgaagattatacgatgt 23989309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 19870119 - 19869978
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattct-ac 113  Q
    |||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||  ||||||||||||| |||||||  | ||||| | || | ||    
T  19870119 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccacgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttatgttataac 19870020  T
Q  114 tcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
     ||| |||||||||||||||||||| ||||||||||||||||    
T  19870019 ccatgtgttgttaaagaagtacctacgaagattatacgatgt 19869978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 36 - 155
Target Start/End: Complemental strand, 16759746 - 16759626
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctactcatatgttgttaaagaagta 134  Q
    ||||| ||||||||||||||||| ||||||||||||||  ||||||||||||| |||||||  | ||||||| |||||| ||| ||||||||||||||||    
T  16759746 gttgtcgatgaattatcatccattagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacccatgtgttgttaaagaagta 16759647  T
Q  135 cctatgaagattatacgatgt 155  Q
    |||| ||||||||||||||||    
T  16759646 cctacgaagattatacgatgt 16759626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 27556192 - 27556065
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||             |||||||||| | |||||||||||||||||||||   ||||||| |||||| |    
T  27556192 gcatttgtcgagtcaaagtcgttgttgatgaatt-------------tgttaagttgatgatgaattatcatctatgagttgtcgagttgttttctaccc 27556106  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  27556105 atgtgttgttaaagaagtacctatgaagattatacgatgtt 27556065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 22948592 - 22948506
Alignment:
Q  69 gttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||| |||||||||||||||||||||   ||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  22948592 gttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 22948506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 22952548 - 22952462
Alignment:
Q  69 gttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||| |||||||||||||||||||||   ||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  22952548 gttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 22952462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 23871036 - 23870950
Alignment:
Q  69 gttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||| |||||||||||||||||||||   ||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  23871036 gttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 23870950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 155
Target Start/End: Complemental strand, 23874992 - 23874906
Alignment:
Q  69 gttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||| |||||||||||||||||||||   ||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  23874992 gttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 23874906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 34963123 - 34963069
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34963123 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 34963069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 149
Target Start/End: Complemental strand, 22805507 - 22805370
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatg--------agttactgagttgtattct 111  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| |||        ||||  |||||||| ||||    
T  22805507 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtcgttaagttgttgagttgtcttct 22805408  T
Q  112 actcatatgttgttaaagaagtacctatgaagattata 149  Q
    || ||| ||||||||| ||||| | |||||||||||||    
T  22805407 acccatgtgttgttaatgaagtgcttatgaagattata 22805370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 19774060 - 19774204
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatg--------agttactgagttgtattct 111  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| | || || ||||| |||        ||||  |||||||| ||||    
T  19774060 ttgtcgagtcaaagtcgttgttgatgacttgtcatccatgagttgttaagttgttgacgagttgtcatccatgagttgttaagttgttgagttgtcttct 19774159  T
Q  112 actcatatgttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    || ||| ||||||||| ||||| | ||||||||||||| ||||||    
T  19774160 acccatgtgttgttaatgaagtgcttatgaagattatatgatgtt 19774204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 23538302 - 23538235
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcat 87  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  23538302 ttgtctagtcaaattcgttgttgatgaattatcatccaagagttgttaagttgttgatgaattatcat 23538235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 23992180 - 23992126
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23992180 ttgtcgattcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 23992126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 17105407 - 17105354
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgt 73  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17105407 ttgtcgagtcaaagtcgttgttgatgaattgtcatccatgagttgttaagttgt 17105354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 17742923 - 17742851
Alignment:
Q  24 cgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||  |||| |||||||    
T  17742923 cgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgaattgacatccatgagtt 17742851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 19656621 - 19656697
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||| ||||| || |||||||||||||||||||||| | ||||||| ||||| |||||||    
T  19656621 ttgtcgagtcaaagtcgttgtcgatgagttgtcatccatgagttgttaagttgatgatgaattctcatccatgagtt 19656697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 27126606 - 27126665
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatga 79  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||    
T  27126606 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatga 27126665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 15705936 - 15706011
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagt 95  Q
    ||||| ||||||| ||||||||||||| || |||||||||||||||||||||||| |||| || ||||| ||||||    
T  15705936 ttgtcaagtcaaattcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagt 15706011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 76 - 155
Target Start/End: Original strand, 18918013 - 18918092
Alignment:
Q  76 atgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||||||||||||| ||| || |  ||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  18918013 atgaattatcatccatgggtgatcgagttgtgttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 18918092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 27416503 - 27416557
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagt 70  Q
    |||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  27416503 gcatctgtcgagtcgaagtcgttgttgatgaattatcatctatgagttgttaagt 27416557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 16759784 - 16759727
Alignment:
Q  31 aagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatc 88  Q
    |||||||||||||||||||||||||||| || |||||||||||  |||||||||||||    
T  16759784 aagtcgttgttgatgaattatcatccattagctgttaagttgtcgatgaattatcatc 16759727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 22948612 - 22948563
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  22948612 gcatttgtcgagtcaaggtcgttgttgatgaattatcatctatgagttgt 22948563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 22952568 - 22952519
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  22952568 gcatttgtcgagtcaaggtcgttgttgatgaattatcatctatgagttgt 22952519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 23871056 - 23871007
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  23871056 gcatttgtcgagtcaaggtcgttgttgatgaattatcatctatgagttgt 23871007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 23875012 - 23874963
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  23875012 gcatttgtcgagtcaaggtcgttgttgatgaattatcatctatgagttgt 23874963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 7825489 - 7825435
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||| ||||||||||||||||||| || ||||||| ||||||||||||||||    
T  7825489 ttgtcgaatcaaagtcgttgttgatgagttgtcatccacgagttgttaagttgtt 7825435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 19656762 - 19656888
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaa--tgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagt 133  Q
    |||||||||||||| |||||||||||||| ||||||||| |  ||  || | ||| |||||||  |||||||| |||||   || ||||||||| |||||    
T  19656762 gttgttgatgaattgtcatccatgagttgctaagttgttgagttgtcttct-atccatgagttgttgagttgtcttctatctatgtgttgttaatgaagt 19656860  T
Q  134 acctatgaagattatacgatgttcatga 161  Q
     | |||||||||||||||||||| ||||    
T  19656861 gcttatgaagattatacgatgtttatga 19656888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 15705985 - 15706044
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagt 95  Q
    ||||||||||| || |||||||||||| ||||||||||| |||| || ||||||||||||    
T  15705985 gttgttgatgagttgtcatccatgagtggttaagttgttgatgagttgtcatctatgagt 15706044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 18917986 - 18918029
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatg 59  Q
    |||||||| ||||||||||||||| |||||||||||||||||||    
T  18917986 gcatttgttgagtcaaagtcgttggtgatgaattatcatccatg 18918029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 225
Target Start/End: Complemental strand, 17742665 - 17742613
Alignment:
Q  172 gttgcttatgacgattgctatgttgtttatgatattgattctgatgttgttata 225  Q
    |||| |||||||| ||| |||||||||||||||||||||| |||||||||||||    
T  17742665 gttgattatgacg-ttgttatgttgtttatgatattgattatgatgttgttata 17742613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 106
Target Start/End: Original strand, 19656746 - 19656799
Alignment:
Q  53 atccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgt 106  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||| || ||||||    
T  19656746 atccatgagttgttaagttgttgatgaattgtcatccatgagttgctaagttgt 19656799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 17742878 - 17742818
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||  |||||||||||||| |||||||| ||||||| || || |||||||    
T  17742878 gttgttgatgaattgacatccatgagttgtaaagttgttgatgaattgtcctccatgagtt 17742818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 17105160 - 17105121
Alignment:
Q  190 tatgttgtttatgatattgattctgatgttgttatatgat 229  Q
    |||||||||||||||||||||| |||||||||| ||||||    
T  17105160 tatgttgtttatgatattgattatgatgttgttttatgat 17105121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 17742845 - 17742807
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||| || |||||||||||||||||||||    
T  17742845 gttgttgatgaattgtcctccatgagttgttaagttgtt 17742807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 19656695 - 19656733
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  19656695 gttgttgataaattgtcatccatgagttgttaagttgtt 19656733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 23538253 - 23538216
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgt 73  Q
    ||||||||||||||||||| || |||||||||||||||    
T  23538253 gttgttgatgaattatcattcaagagttgttaagttgt 23538216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 20182440 - 20182380
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||| ||||||| |||||||| ||||||  ||||||| ||||  |||||||    
T  20182440 gttgttgatgaattgtcatccacgagttgttgagttgtcgatgaattgtcatacatgagtt 20182380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 22153551 - 22153611
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||| ||||||| |||||||| ||||||  ||||||| ||||  |||||||    
T  22153551 gttgttgatgaattgtcatccacgagttgttgagttgtcgatgaattgtcatacatgagtt 22153611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 1e-55; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 8 - 161
Target Start/End: Complemental strand, 9784547 - 9784394
Alignment:
Q  8 ttggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgta 107  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||| |     
T  9784547 ttggagtcgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgttgagttttc 9784448  T
Q  108 ttctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||| ||| ||||||||||||||||||||||||| ||||| |||||| ||||    
T  9784447 ttctacccatgtgttgttaaagaagtacctatgaagtttatatgatgtttatga 9784394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 1282917 - 1282772
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||   ||||||| |||||| |    
T  1282917 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctataagttgtcgagttgtcttctaccc 1282818  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||||||||||||||||||||| ||||    
T  1282817 atgtgttgttaaagaagtacctatgaagattatacgatgtttatga 1282772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 31344666 - 31344522
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||   ||||||| |||||| |    
T  31344666 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtga-tgaattatcatctatgagttgtcgagttgtcttctaccc 31344568  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||||||||||||||||||||| ||||    
T  31344567 atgtgttgttaaagaagtacctatgaagattatacgatgtttatga 31344522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 41531582 - 41531721
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  41531582 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccc 41531681  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    || |||||||||||||||||||| ||||||||||||||||    
T  41531682 atgtgttgttaaagaagtacctacgaagattatacgatgt 41531721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 30345593 - 30345732
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  30345593 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccc 30345692  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    || |||||||||||||||||||| ||||||||||||||||    
T  30345693 atgtgttgttaaagaagtacctacgaagattatacgatgt 30345732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 24629056 - 24629196
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  24629056 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 24629155  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  24629156 catgtgttgttaaagaagtacctacgaagattatacgatgt 24629196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 27380009 - 27380149
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  27380009 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 27380108  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  27380109 catgtgttgttaaagaagtacctacgaagattatacgatgt 27380149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 27384055 - 27384195
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  27384055 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 27384154  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  27384155 catgtgttgttaaagaagtacctacgaagattatacgatgt 27384195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 27601321 - 27601181
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  27601321 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 27601222  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  27601221 catgtgttgttaaagaagtacctacgaagattatacgatgt 27601181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 10102230 - 10102370
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  10102230 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 10102329  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| ||| |||||||||||||||| ||||||||||||||||    
T  10102330 catgtgtcgttaaagaagtacctacgaagattatacgatgt 10102370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 24648884 - 24648744
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  24648884 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 24648785  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||| ||||||||    
T  24648784 catgtgttgttaaagaagtacctacgaagattgtacgatgt 24648744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 96
Target Start/End: Original strand, 32215385 - 32215472
Alignment:
Q  8 ttggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  32215385 ttggagttgcatt-gtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatccatgagtt 32215472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 12902093 - 12902190
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctac 113  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| ||||||    
T  12902093 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctac 12902190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 17306331 - 17306255
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| |||||||    
T  17306331 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtt 17306255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 38967140 - 38967084
Alignment:
Q  11 gagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgtta 67  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38967140 gagtcgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgtta 38967084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 24367503 - 24367446
Alignment:
Q  10 ggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgtta 67  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24367503 ggagtcgcatttgtcgagtcaaagtcgttgttgatgaattatcattcatgagttgtta 24367446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 28653710 - 28653764
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  28653710 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgtt 28653764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 24515029 - 24514976
Alignment:
Q  21 tgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  24515029 tgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgtt 24514976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 36839042 - 36838972
Alignment:
Q  26 agtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||  |||||||    
T  36839042 agtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcattcatgagtt 36838972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 32215445 - 32215483
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32215445 gttgttgatgaattatcatccatgagttgttaagttgtt 32215483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 357694 - 357648
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttatatgatgtt 232  Q
    |||||||||||||||||||||||||| ||||||| | | ||||||||    
T  357694 ttgctatgttgtttatgatattgattatgatgttataagatgatgtt 357648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 17306282 - 17306244
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  17306282 gttgttgatgagttgtcatccatgagttgttaagttgtt 17306244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 7672749 - 7672782
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  7672749 atgttgtttatgatattgattatgatgttgttat 7672782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 17306191 - 17306158
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  17306191 atgttgtttatgatattgattatgatgttgttat 17306158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 24866069 - 24866102
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  24866069 atgttgtttatgatattgattatgatgttgttat 24866102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 28653817 - 28653850
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  28653817 atgttgtttatgatattgattatgatgttgttat 28653850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 36838908 - 36838875
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  36838908 atgttgtttatgatattgattatgatgttgttat 36838875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 1282743 - 1282703
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttatat 226  Q
    ||||||||||||||| |||||||||| |||| |||||||||    
T  1282743 ttgctatgttgtttaagatattgattatgatattgttatat 1282703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 4e-53; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 11230650 - 11230505
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  11230650 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccc 11230551  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||||||||||||||||||||| ||||    
T  11230550 atgtgttgttaaagaagtacctatgaagattatacgatgtttatga 11230505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 18355746 - 18355609
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   ||||||| |||||| |    
T  18355746 gcatttgtcgagtcgaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgagttgtcttctaccc 18355647  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgat 153  Q
    || |||||||||||||||||||||||||||||||||||    
T  18355646 atgtgttgttaaagaagtacctatgaagattatacgat 18355609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 11220252 - 11220107
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  11220252 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgacgagttgtcttctaccc 11220153  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||| ||||||||||||||||||||| ||||    
T  11220152 atgtgttgttaaagaagtagctatgaagattatacgatgtttatga 11220107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 11224838 - 11224693
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  11224838 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgatttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccc 11224739  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||||||||||||||||||||| ||||    
T  11224738 atgtgttgttaaagaagtacctatgaagattatacgatgtttatga 11224693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 11228661 - 11228516
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  11228661 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgacgagttgtcttctaccc 11228562  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||| ||||||||||||||||| ||||    
T  11228561 atgtgttgttaaagaagtacctaggaagattatacgatgtttatga 11228516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 40724193 - 40724332
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||   ||||||| |||||| |    
T  40724193 gcatctgtcaagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagttgtcgagttgtgttctaccc 40724292  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    || |||||||||||||||||||| ||||||||||||||||    
T  40724293 atgtgttgttaaagaagtacctacgaagattatacgatgt 40724332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 20295376 - 20295235
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  20295376 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 20295277  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    ||| |||||||||||||||||||| |||||||||||||||||    
T  20295276 catgtgttgttaaagaagtacctacgaagattatacgatgtt 20295235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 10752719 - 10752576
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||   ||||||| ||||||      
T  10752719 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatc--tgagttgtcgagttgtcttctacct 10752622  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||||||||||||||||| || ||||||||||||||||| ||||    
T  10752621 atatgttgttaaagaagtacatacgaagattatacgatgtttatga 10752576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 15237412 - 15237556
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||    ||||||| ||||||      
T  15237412 gcatttgtcgagtcaaggtcgttgt-gatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagtcgtcgagttgtcttctacct 15237510  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||| ||||||||||||||||| ||||    
T  15237511 atgtgttgttaaagaagtacctacgaagattatacgatgtttatga 15237556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 11226671 - 11226546
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  11226671 gcatttgtcgagtcaagatcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccc 11226572  T
Q  116 atatgttgttaaagaagtacctatga 141  Q
    || |||||||||||||||| ||||||    
T  11226571 atgtgttgttaaagaagtagctatga 11226546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 69 - 169
Target Start/End: Original strand, 22108009 - 22108109
Alignment:
Q  69 gttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtc 168  Q
    |||||| |||||||||||||||||||||  |||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22108009 gttgttgatgaattatcatctatgagttgttgagttgtcttctacccatgtgttgttaaagaagtacctatgaagattatacgatgttcatgacgttgtc 22108108  T
Q  169 a 169  Q
    |    
T  22108109 a 22108109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 20911531 - 20911623
Alignment:
Q  69 gttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||| |||||||||||||||| ||||   ||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  20911531 gttgttgatgaattatcatctattagttgacgagttgtcttctacccatgtgttgttaaagaagtacctatgaagattatacgatgtttatga 20911623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 24767898 - 24767990
Alignment:
Q  69 gttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||| |||||||||||||| ||||||   ||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  24767898 gttgttgatgaattatcatctgtgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctatgaagattatacgatgtttatga 24767990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 19473315 - 19473401
Alignment:
Q  69 gttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    |||||| |||||||||||||||||||||   ||||||| |||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  19473315 gttgttgatgaattatcatctatgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctacgaagattatacgatgt 19473401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 22107981 - 22108046
Alignment:
Q  8 ttggagttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgt 73  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  22107981 ttggagtcgcatttgtcgagtcaaagtcgttgttgatgaattatcatctatgagttgttgagttgt 22108046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 19473295 - 19473344
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  19473295 gcatttgtcgagtcaaggtcgttgttgatgaattatcatctatgagttgt 19473344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 20911511 - 20911559
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttg 64  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||    
T  20911511 gcatttgtcgagtcaaagtcgttgttgatgaattatcatctattagttg 20911559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 33896117 - 33896171
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||| |||||||||||||||||||||| || |||||||||||| ||||| |||||    
T  33896117 ttgttgagtcaaagtcgttgttgatgagttgtcatccatgagtcgttaaattgtt 33896171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 24767878 - 24767927
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    |||||||  |||||||||||||||||||||||||||||||  ||||||||    
T  24767878 gcatttgatgagtcaaagtcgttgttgatgaattatcatctgtgagttgt 24767927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 14689 - 14828
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| |||||| |    
T  14689 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctaccc 14788  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    || |||||||||||||||||||||||||||| ||||||||    
T  14789 atgtgttgttaaagaagtacctatgaagattttacgatgt 14828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 14934 - 14974
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttatat 226  Q
    ||||||||||||||| |||||||||| |||| |||||||||    
T  14934 ttgctatgttgtttaagatattgattatgatattgttatat 14974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 208190 - 208327
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||   || |||| |||||| |    
T  208190 gcatttgtcaagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgacttgtcttctaccc 208289  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgat 153  Q
    || |||||||||||||||||||||||||||||||||||    
T  208290 atgtgttgttaaagaagtacctatgaagattatacgat 208327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 189979 - 190116
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||   ||||||| |||| | |    
T  189979 gcatttgtcgagtcaaagtcgttgttgatgaattataatccatgagttgttaagttgttgatgaattatcatctatgagttgtcgagttgtcttcttccc 190078  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgat 153  Q
    || |||||||||||||||||||||||||||||||||||    
T  190079 atgtgttgttaaagaagtacctatgaagattatacgat 190116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 99; Significance: 5e-49; HSPs: 2)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 8090 - 8231
Alignment:
Q  40 ttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctat 139  Q
    ||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||  |||||||| |||||| ||| |||||||||||||||||||||    
T  8090 ttgatgaattatcatccatgagttgttaagttgtcgatgaattgtcatctatgagttgttgagttgtcttctacccatgtgttgttaaagaagtacctat 8189  T
Q  140 gaagattatacgatgttcatgacgttgtcaaagttgcttatga 182  Q
    ||||||||||||||||||||||||||||  |||||||||||||    
T  8190 gaagattatacgatgttcatgacgttgt-taagttgcttatga 8231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 8037 - 8113
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||    
T  8037 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagtttttgatgaattatcatccatgagtt 8113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 93 - 234
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  93 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtcttctacc 192  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    ||| ||||||||||||||||||||||||||||||||||||||    
T  193 catgtgttgttaaagaagtacctatgaagattatacgatgtt 234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 11499 - 11354
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||   ||||||| |||||| |    
T  11499 gcatttgttgagtcaaagtcattgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatctacgagttgtcgagttgtcttctaccc 11400  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || | |||||||||||||||||||||||||||||||||||| ||||    
T  11399 atgtcttgttaaagaagtacctatgaagattatacgatgtttatga 11354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 98; Significance: 2e-48; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 36566 - 36711
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| ||||||      
T  36566 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctacct 36665  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    || |||||||||||||||||||| ||||||||||||||||| ||||    
T  36666 atgtgttgttaaagaagtacctacgaagattatacgatgtttatga 36711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 1063 - 1135
Alignment:
Q  24 cgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||    
T  1063 cgagtcaatgtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattaccatccatgagtt 1135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 1108 - 1146
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  1108 gttgttgatgaattaccatccatgagttgttaagttgtt 1146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 73896 - 74036
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||   ||||||| ||||||      
T  73896 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttcagttgttgatgaattatcatctaagagttgtcgagttgtcttctacct 73995  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgtt 156  Q
    |  ||||||||||||||||||||||||||||||||||||||    
T  73996 aagtgttgttaaagaagtacctatgaagattatacgatgtt 74036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 20781 - 20933
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaag--ttgttaatgaattatcatctatgagttactgagttgtattctac 113  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||  || || |||||||||||||||||||||  |||||||| ||||||    
T  20781 gcatttgtcgagtcaaagttgttgttgatgaattatcatccatgagttgttaagtttttttgatgaattatcatctatgagttgttgagttgtcttctac 20880  T
Q  114 tcatatgttgtt--aaagaagtacctatgaagattatacgatgttcatgacgt 164  Q
     ||| |||||||  |||||||||||||||||||||||| |||||| |||||||    
T  20881 ccatgtgttgttaaaaagaagtacctatgaagattatatgatgtttatgacgt 20933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 5676 - 5816
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  5676 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 5775  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  5776 catgtgttgttaaagaagtacctacgaagattatacgatgt 5816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 11951 - 11811
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  11951 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 11852  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  11851 catgtgttgttaaagaagtacctacgaagattatacgatgt 11811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 33263 - 33403
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  33263 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 33362  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  33363 catgtgttgttaaagaagtacctacgaagattatacgatgt 33403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 89; Significance: 5e-43; HSPs: 3)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 67878 - 68018
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  67878 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 67977  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| ||||||||||||||||    
T  67978 catgtgttgttaaagaagtacctacgaagattatacgatgt 68018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 19613 - 19689
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||| |||||||||||| |||| || |||||||||||||| ||| ||||| |||| || ||||| |||||||    
T  19613 ttgtcgagttaaagtcgttgttaatgagttgtcatccatgagttgctaatttgttgatgagttgtcatccatgagtt 19689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 19663 - 19700
Alignment:
Q  37 ttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||| || ||||||||||||||||||||||||    
T  19663 ttgttgatgagttgtcatccatgagttgttaagttgtt 19700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 88; Significance: 2e-42; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 66101 - 66240
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||| ||||||    ||||||| |||||| |    
T  66101 gcatttgtcgagtcaaagtcgttgtttatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtcgtcgagttgtgttctaccc 66200  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    || |||||||||||||||| ||| ||||||||||||||||    
T  66201 atgtgttgttaaagaagtagctacgaagattatacgatgt 66240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 62185 - 62324
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  ||||||    ||||||| |||||| |    
T  62185 gcatttgtcgattcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatacatgagtcgtcgagttgtgttctaccc 62284  T
Q  116 atatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    || |||||||||||||||| ||| ||||||||||||||||    
T  62285 atgtgttgttaaagaagtagctacgaagattatacgatgt 62324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 80071 - 79925
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| |||| |||||| |||||||||||||||||||||||||| ||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  80071 gcatatgtcaagtcaaggtcgttgttgatgaattatcatccataagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtcttctacc 79972  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
     || |||| ||||||||||||||| ||||||||||||||||| ||||    
T  79971 tatgtgttattaaagaagtacctacgaagattatacgatgtttatga 79925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 59296 - 59436
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact-gagttgtattctact 114  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||  | ||||||| ||||||     
T  59296 gcatatgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatccatgagtttgtcgagttgtgttctacc 59395  T
Q  115 catatgttgttaaagaagtacctatgaagattatacgatgt 155  Q
    ||| |||||||||||||||||||| || |||||||||||||    
T  59396 catgtgttgttaaagaagtacctacgatgattatacgatgt 59436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 161
Target Start/End: Complemental strand, 9381 - 9235
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | || ||   ||| ||| || |||      
T  9381 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattatcatccaagaattgtcgagctgtcttatacct 9282  T
Q  116 atatgttgttaaagaagtacctatgaag-attatacgatgttcatga 161  Q
    |  ||||||||||||||||||||||||| ||||||||||||| ||||    
T  9281 aagtgttgttaaagaagtacctatgaagaattatacgatgtttatga 9235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 8260 - 8201
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatga 79  Q
    |||||||||| |||||||||||||||| || |||||||||||||||||||||||| ||||    
T  8260 ttgtcgagtctaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatga 8201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 4446 - 4543
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctac 113  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||| ||||||    
T  4446 gcatttgtcgagtcaaggtcgttgttgatgaattatcatccatgagttgttaagttgtcgatgaattatcatctatgagttgtcgagttgtcttctac 4543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 69; Significance: 4e-31; HSPs: 3)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 29341 - 29261
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||    
T  29341 gcatttgtcgagtcaaagtcgttgttgatgaattattatccatgagttgttaagttgttgatgaattatcatccatgagtt 29261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 29288 - 29250
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29288 gttgttgatgaattatcatccatgagttgttaagttgtt 29250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 29108 - 29075
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  29108 atgttgtttatgatattgattatgatgttgttat 29075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 12705 - 12781
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||    
T  12705 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttgatgtattatcatccatgagtt 12781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 12754 - 12792
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  12754 gttgttgatgtattatcatccatgagttgttaagttgtt 12792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 165
Target Start/End: Complemental strand, 7274 - 7137
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttact--------gagttgtattctactcatatgttgttaa 127  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||||| |||||||||||||  |        ||||||| | |||| | | |||||||||    
T  7274 gttgttgatgaattgtcatccatgagttgtcaagttgttgatgaattgtcatctatgagttgttaagttgttgagttgtctgctacccctgtgttgttaa 7175  T
Q  128 agaagtacctatgaagattatacgatgttcatgacgtt 165  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7174 agaagtacctatgaagattatacgatgttcatgacgtt 7137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 7317 - 7247
Alignment:
Q  23 tcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||||| ||||| |||||||    
T  7317 tcgagtcaaagtcgttgttgatgaattatcatccatga---gttaagttgttgatgaattgtcatccatgagtt 7247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 18059 - 18135
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||    
T  18059 ttgtcgagtcaaagtcgttgttgatgaattatcatccttgagttgttaagttgttgatgaattatcatccatgagtt 18135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 18108 - 18146
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18108 gttgttgatgaattatcatccatgagttgttaagttgtt 18146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 74
Target Start/End: Complemental strand, 28856 - 28798
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28856 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 28798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 10738 - 10666
Alignment:
Q  24 cgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||    
T  10738 cgagtcaatgtcgttgttgatgaattatcatccatgagttgttaagttgttgatgaattaccatccatgagtt 10666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 10693 - 10655
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  10693 gttgttgatgaattaccatccatgagttgttaagttgtt 10655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 10395 - 10487
Alignment:
Q  69 gttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    |||||| |||||||||||||| ||||||   ||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  10395 gttgttgatgaattatcatctgtgagttgtcgagttgtcttctacccatgtgttgttaaagaagtacctatgaagattatacgatgtttatga 10487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 10375 - 10424
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    |||||||  |||||||||||||||||||||||||||||||  ||||||||    
T  10375 gcatttgatgagtcaaagtcgttgttgatgaattatcatctgtgagttgt 10424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 54; Significance: 4e-22; HSPs: 6)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 15544 - 15617
Alignment:
Q  23 tcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||| |||||||    
T  15544 tcgagttaaagtcgttgttgatgaattgtcatccatgagttgttaagttgttgatgaattgtcatccatgagtt 15617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 15689 - 15741
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatc 88  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||| |||||    
T  15689 gttgttgatgaattgtcatccatgagttgttaagttgttgatgaattgtcatc 15741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 15590 - 15650
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||| |||||||||||||||| ||||||| ||||||| || || |||||||    
T  15590 gttgttgatgaattgtcatccatgagttgtttagttgttcatgaattgtcgtccatgagtt 15650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 15656 - 15716
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||||| | |||||||||||||| ||||||| ||||||| ||||| |||||||    
T  15656 gttgttgatgaattgtgatccatgagttgtttagttgttgatgaattgtcatccatgagtt 15716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 15623 - 15683
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||| ||||||| || ||||||||||||||||||||| ||||||| | ||| |||||||    
T  15623 gttgttcatgaattgtcgtccatgagttgttaagttgttgatgaattgtgatccatgagtt 15683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 15722 - 15774
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatc 88  Q
    |||||||||||||| |||||| |||||||||| |||||| ||||||| |||||    
T  15722 gttgttgatgaattgtcatccgtgagttgttaggttgttgatgaattgtcatc 15774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold1662
Description:

Target: scaffold1662; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 629 - 705
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| |||||||    
T  629 ttgtcgagtcaaagtcgttgttgatgagttctcatccatgagttgttaagttgttgatgagttgtcatccatgagtt 705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 678 - 716
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  678 gttgttgatgagttgtcatccatgagttgttaagttgtt 716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 4449 - 4329
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagttactgagttgtattctactcatatgttgttaaagaagtac 135  Q
    ||||||||||| || |||||||||||||||||||||||| |||| || ||||| ||||||   | |||||| |||||| ||| ||||||||| ||||| |    
T  4449 gttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtcgttaagttgtcttctacccatgtgttgttaatgaagtgc 4350  T
Q  136 ctatgaagattatacgatgtt 156  Q
     ||||||||||||| ||||||    
T  4349 ttatgaagattatatgatgtt 4329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 4498 - 4422
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||| || |||||||||| || |||||||||||||||||||||||| |||| || ||||| |||||||    
T  4498 ttgtcgagtcaaaatcattgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtt 4422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 19270 - 19346
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| || ||||| |||||||    
T  19270 ttgtcgagtcaaaatcgttgttgatgaattgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtt 19346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 19319 - 19357
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  19319 gttgttgatgagttgtcatccatgagttgttaagttgtt 19357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 13913 - 13988
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagt 95  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| || ||||| ||||||    
T  13913 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagt 13988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 63450 - 63526
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||| || ||||||| ||| | |||||||    
T  63450 ttgtcgagtcaaattcgttgttgatgaattgtcatccatgagttgttaagttcttgatgaattgtcaaccatgagtt 63526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 10760 - 10706
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  10760 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgtt 10706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 70858 - 70804
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagt 70  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  70858 gcatttgtcgagtctaagtcgttgttgatgaattatcatctatgagttgttaagt 70804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 45; Significance: 9e-17; HSPs: 5)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 20010 - 20086
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    ||||||||| |||||| |||||||||| || |||||||||||||||||||||||| |||| || ||||| |||||||    
T  20010 ttgtcgagtgaaagtcattgttgatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagtt 20086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 7134 - 7093
Alignment:
Q  24 cgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  7134 cgagtcaaagtcgttgttgatgagttgtcatccatgagttgt 7093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 14253 - 14212
Alignment:
Q  24 cgagtcaaagtcgttgttgatgaattatcatccatgagttgt 65  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  14253 cgagtcaaagtcgttgttgatgagttgtcatccatgagttgt 14212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 20059 - 20097
Alignment:
Q  36 gttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  20059 gttgttgatgagttgtcatccatgagttgttaagttgtt 20097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Original strand, 20150 - 20183
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  20150 atgttgtttatgatattgattatgatgttgttat 20183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 832 - 904
Alignment:
Q  24 cgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagtt 96  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||| || | ||||| ||||| |||||||    
T  832 cgagtcaaagtctttgttgatgaattgtcatccatgagttgttaagttattgaggaattgtcatccatgagtt 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 1016 - 1054
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttat 224  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  1016 ttgctatgttgtttatgatattgattatgatgttgttat 1054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 119 - 37
Alignment:
Q  12 agttgcatttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaatgaattatcatctatgagt 95  Q
    |||||||||| ||||||||| ||||||||| |||| || |||||||||||||||||||||||| |||| || ||||| ||||||    
T  119 agttgcattt-tcgagtcaatgtcgttgttcatgagttgtcatccatgagttgttaagttgttgatgagttgtcatccatgagt 37  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 102305 - 102359
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||| ||||||||||||||||||||| || ||||||||||||||||||||||||    
T  102305 ttgtcaagtcaaagtcgttgttgatgagttgtcatccatgagttgttaagttgtt 102359  T

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Target: scaffold0034 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 116673 - 116619
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgtt 74  Q
    ||||||||||||||||||||||||||| || |||||||||||| |||||||||||    
T  116673 ttgtcgagtcaaagtcgttgttgatgagttgtcatccatgagtcgttaagttgtt 116619  T

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Target: scaffold0299 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 6470 - 6426
Alignment:
Q  16 gcatttgtcgagtcaaagtcgttgttgatgaattatcatccatga 60  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  6470 gcatttgtcgagtcaaagtcgttgttgatgaattatcatctatga 6426  T

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Target: scaffold0096 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 13307 - 13269
Alignment:
Q  186 ttgctatgttgtttatgatattgattctgatgttgttat 224  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13307 ttgctatgttgtttatgatattgattctgatgttgttat 13269  T

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Target: scaffold0074 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 161
Target Start/End: Original strand, 51314 - 51375
Alignment:
Q  100 gagttgtattctactcatatgttgttaaagaagtacctatgaagattatacgatgttcatga 161  Q
    ||||||| ||||||  || |||||||||||||||||||| ||||||||||||||||| ||||    
T  51314 gagttgtcttctacctatgtgttgttaaagaagtacctacgaagattatacgatgtttatga 51375  T

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Target: scaffold0073 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 56666 - 56610
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaa 76  Q
    ||||||||||||||||||||| ||| | |||| ||||||||||||| ||||||||||    
T  56666 ttgtcgagtcaaagtcgttgtcgataagttattatccatgagttgtcaagttgttaa 56610  T

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Target: scaffold0863 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 224
Target Start/End: Complemental strand, 670 - 637
Alignment:
Q  191 atgttgtttatgatattgattctgatgttgttat 224  Q
    ||||||||||||||||||||| ||||||||||||    
T  670 atgttgtttatgatattgattatgatgttgttat 637  T

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Target: scaffold0359 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 15207 - 15154
Alignment:
Q  23 tcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaa 76  Q
    |||||||||||||||||| ||| | || | ||||||||||||| ||||||||||    
T  15207 tcgagtcaaagtcgttgtcgataagttgttatccatgagttgtcaagttgttaa 15154  T

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Target: scaffold0077 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 20987 - 20943
Alignment:
Q  51 tcatccatgagttgttaagttgttaatgaattatcatctatgagt 95  Q
    |||||||||||||||||||||||| |||| || ||||| ||||||    
T  20987 tcatccatgagttgttaagttgttgatgagttgtcatccatgagt 20943  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 166827 - 166883
Alignment:
Q  20 ttgtcgagtcaaagtcgttgttgatgaattatcatccatgagttgttaagttgttaa 76  Q
    ||||||||||||||||||||| ||| | || | ||||||| ||||| ||||||||||    
T  166827 ttgtcgagtcaaagtcgttgtcgataagtttttatccatgcgttgtcaagttgttaa 166883  T

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