View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10481A_low_521 (Length: 236)
Name: NF10481A_low_521
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10481A_low_521 |
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Alignment Details
Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 17 - 226
Target Start/End: Original strand, 2849465 - 2849674
Alignment:
| Q |
17 |
tgttgatgttattaatgcgttgataactatgtatgcgaaatgtggggatattgatactgctaggttggtttttgataagatgcctaaaaaagataggatt |
116 |
Q |
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| T |
2849465 |
tgttgatgttattaatgcgttgataactatgtatgcgaaatgtggggatattgatactgctaggttggtttttgataagatgcctaaaaaagataggatt |
2849564 |
T |
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| Q |
117 |
tcgtggaatgcgatgattgctgggtgttttgagaatggtgaatgtttggaggggttgacattgttttgcaggatgattgaatatccggttgaccacgatt |
216 |
Q |
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| T |
2849565 |
tcgtggaatgcgatgattgctgggtgttttgagaatggtgaatgtttggaggggttgacattgttttgcaggatgattgaatatccggttgacccagatt |
2849664 |
T |
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| Q |
217 |
tgatgtccat |
226 |
Q |
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| T |
2849665 |
tgatgaccat |
2849674 |
T |
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