View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10481A_low_569 (Length: 230)
Name: NF10481A_low_569
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10481A_low_569 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 17 - 215
Target Start/End: Original strand, 191150 - 191348
Alignment:
| Q |
17 |
acatcataagagttgcaacataataaggatcaacgatcccccttttgaaagtgctactaacaaaggagcatacattattaccaataaccccccaaaacat |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
191150 |
acatcataagagttgcaacataataaggatcaacgatcccccttttgaaagtgctactaacaaaggagcatacattattaccaataacctcccaaaacat |
191249 |
T |
|
| Q |
117 |
cttataaaagattggttggaattcatctagacctggaactttgtaggacttcatgctcatgagagcttgatagatctctttgttactaatgaacaccaa |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
191250 |
cttataaaagattggttggaattcatctagacctggaactttgtaggacttcatgctcatgagagcttgataaatctctttgttactaatgaacaccaa |
191348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University