View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10481A_low_575 (Length: 230)
Name: NF10481A_low_575
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10481A_low_575 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 29563640 - 29563869
Alignment:
| Q |
1 |
aaactataatttttgcaacattaactgtatcattctgcaacatacgaaacattttattctacattcaatggtctcttacgtctccttatttatctcaggt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
29563640 |
aaactataatttttgcaacattaactgtatcattctgcaacatacgaaacattttattctacattcaatggtctcttatgtctccttatttatctcaggt |
29563739 |
T |
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| Q |
101 |
atgaattgctcttttacccaagatatcaccttgatcaaagctcattgctctgtcgaaaaccattgtttgcgaaaccaattgtgatggatgtgtaccaaga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29563740 |
atgaattgctcttttacccaagatatcaccttgatcaaagctcattgctctgtcgaaaaccattgtttgcgaaaccaattgtgatggatgtgtaccaaga |
29563839 |
T |
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| Q |
201 |
ttatatacttgttacgtatagaccatttga |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
29563840 |
ttatatacttgttacgtatagaccatttga |
29563869 |
T |
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