View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10481A_low_614 (Length: 227)
Name: NF10481A_low_614
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10481A_low_614 |
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Alignment Details
Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 13 - 220
Target Start/End: Complemental strand, 35559179 - 35558972
Alignment:
| Q |
13 |
tggtggtaaggggaaaaccttgcctcgtgtaacgaatcgtgatgacgagattaatgacacgataccgagtttgggatcggagactaatttcaggaatggg |
112 |
Q |
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| T |
35559179 |
tggtggtaaggggaaaaccttgcctcgggtaacgaatcgtgatgacgagattaatgacacgataccgagtttgggatcggagactaatttcaggaatggg |
35559080 |
T |
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| Q |
113 |
aagtatttgtattattcgcgaggtggtgattattgtaagggtatgaatcattttatgtggaattttttgtgtggtttaggtgaagctatgtttttgaata |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
35559079 |
aagtatttgtattattcgcgaggtggtgattattgtaagggtatgaatcattttatgtggagttttttgtgtggtttaggtgaagctatgtttttgaata |
35558980 |
T |
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| Q |
213 |
gaactttt |
220 |
Q |
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|||||||| |
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| T |
35558979 |
gaactttt |
35558972 |
T |
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