View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10481A_low_630 (Length: 225)

Name: NF10481A_low_630
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10481A_low_630
NF10481A_low_630
[»] chr3 (21 HSPs)
chr3 (21-206)||(41985664-41985852)
chr3 (21-204)||(41980890-41981073)
chr3 (22-101)||(9695616-9695695)
chr3 (21-101)||(9329872-9329952)
chr3 (23-98)||(9655360-9655435)
chr3 (21-87)||(9494822-9494888)
chr3 (21-206)||(9448350-9448535)
chr3 (29-98)||(9646367-9646436)
chr3 (26-101)||(9407407-9407482)
chr3 (26-101)||(9416614-9416689)
chr3 (21-101)||(9336576-9336656)
chr3 (21-101)||(9343881-9343961)
chr3 (29-93)||(9626488-9626552)
chr3 (29-107)||(9756424-9756502)
chr3 (28-101)||(9432939-9433012)
chr3 (28-101)||(9617463-9617536)
chr3 (26-98)||(9425614-9425686)
chr3 (53-101)||(9686751-9686799)
chr3 (32-86)||(9340718-9340772)
chr3 (24-101)||(9395298-9395375)
chr3 (26-67)||(9441815-9441856)
[»] chr8 (2 HSPs)
chr8 (41-206)||(13170579-13170744)
chr8 (21-206)||(44688680-44688865)
[»] chr1 (7 HSPs)
chr1 (119-206)||(18991335-18991422)
chr1 (22-78)||(8814385-8814441)
chr1 (22-83)||(235250-235311)
chr1 (22-83)||(251412-251473)
chr1 (21-96)||(4428667-4428742)
chr1 (22-76)||(246904-246958)
chr1 (22-78)||(231618-231674)
[»] chr6 (7 HSPs)
chr6 (23-101)||(7041534-7041612)
chr6 (22-83)||(7025793-7025854)
chr6 (22-83)||(7029850-7029911)
chr6 (22-83)||(9170854-9170915)
chr6 (22-81)||(9159515-9159574)
chr6 (21-83)||(7046875-7046937)
chr6 (22-83)||(7012857-7012918)
[»] chr2 (1 HSPs)
chr2 (21-98)||(20694304-20694381)
[»] chr5 (1 HSPs)
chr5 (39-87)||(18571165-18571213)
[»] chr7 (1 HSPs)
chr7 (26-101)||(450111-450186)


Alignment Details
Target: chr3 (Bit Score: 163; Significance: 3e-87; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 21 - 206
Target Start/End: Original strand, 41985664 - 41985852
Alignment:
Q  21 tccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaagctttaaaccatcttcacc 120  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41985664 tccccaagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaagctttaaaccatcttcacc 41985763  T
Q  121 agggaaaccaaaacaatgagagtcatatatgtctactagcaacaac---tcacgctcactctctaccaggaatttcatgtcccctccat 206  Q
     |||||||||||||||||||||||||||||||||||||||||||||   |||| |||||||||||||||||||||||||||||||||||    
T  41985764 ggggaaaccaaaacaatgagagtcatatatgtctactagcaacaactgatcaccctcactctctaccaggaatttcatgtcccctccat 41985852  T

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Target: chr3; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 21 - 204
Target Start/End: Original strand, 41980890 - 41981073
Alignment:
Q  21 tccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaagctttaaaccatcttcacc 120  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||| | |||| || ||||||||||| || ||||||||||||||    
T  41980890 tccccaagaacaaaactctatcccctaaactcgtcaacttgacccatttcttctctttcttagcaagcctaaacacatcaagattgaaaccatcttcacc 41980989  T
Q  121 agggaaaccaaaacaatgagagtcatatatgtctactagcaacaactcacgctcactctctaccaggaatttcatgtcccctcc 204  Q
    |||||| |||| ||||||||||| ||| ||||| |||||||| || |||| |||||||||||||||||||||||  ||||||||    
T  41980990 agggaacccaacacaatgagagtgataaatgtccactagcaataattcaccctcactctctaccaggaatttcacatcccctcc 41981073  T

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Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 9695695 - 9695616
Alignment:
Q  22 ccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 101  Q
    |||||| ||||||||||||||||||||| | | |||||||||||| |||||||||||||||||||| ||||| |||||||    
T  9695695 ccccaaaaacaaaaccctatcccctaaattggtcaacttgacccacttcttctccttctcatcaagcctgaatacatcaa 9695616  T

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Target: chr3; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 9329872 - 9329952
Alignment:
Q  21 tccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 101  Q
    ||||||||||||||||| |||| |||||| ||||||||||||||||  | ||||| ||||||||||| || ||||||||||    
T  9329872 tccccaagaacaaaaccttatctcctaaattcgccaacttgacccaccttttctctttctcatcaagcctaaacacatcaa 9329952  T

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Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 9655435 - 9655360
Alignment:
Q  23 cccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacat 98  Q
    ||||| ||||||||||||||||||||| ||  |||||| |||||||||||||||||||||| || |||||| ||||    
T  9655435 cccaaaaacaaaaccctatcccctaaattcatcaacttcacccatttcttctccttctcatgaaatctgaaaacat 9655360  T

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Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 9494888 - 9494822
Alignment:
Q  21 tccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaag 87  Q
    ||||||||||||||||||||||||||||||||  ||| || |||||| || ||||||||||||||||    
T  9494888 tccccaagaacaaaaccctatcccctaaactcatcaaattcacccatctcatctccttctcatcaag 9494822  T

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Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 206
Target Start/End: Original strand, 9448350 - 9448535
Alignment:
Q  21 tccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaagctttaaaccatcttcacc 120  Q
    |||||||||||||||| |||||||||||| | |  ||||| |||||||||||||||||||||| |||  | |||||||||| | ||| | ||||   |||    
T  9448350 tccccaagaacaaaacactatcccctaaagttgttaacttcacccatttcttctccttctcataaagcttaaacacatcaacccttatagcatcaggacc 9448449  T
Q  121 agggaaaccaaaacaatgagagtcatatatgtctactagcaacaactcacgctcactctctaccaggaatttcatgtcccctccat 206  Q
     |||||  | ||||||  | | ||||| ||||| ||||||||||| || | ||| || || || | |||||| |||||||||||||    
T  9448450 cgggaactcgaaacaaaaacactcataaatgtccactagcaacaagtctccctctctatcaactaagaattttatgtcccctccat 9448535  T

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Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 98
Target Start/End: Complemental strand, 9646436 - 9646367
Alignment:
Q  29 aacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacat 98  Q
    ||||||||||||||||||||| ||  |||||| |||||||||||||||||||||| || |||||| ||||    
T  9646436 aacaaaaccctatcccctaaattcatcaacttcacccatttcttctccttctcatgaaatctgaaaacat 9646367  T

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Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 9407407 - 9407482
Alignment:
Q  26 aagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 101  Q
    |||||||||||||||||||||||||||  |||||| |||||| | || | |||||| |||||||| ||||||||||    
T  9407407 aagaacaaaaccctatcccctaaactcatcaacttcacccatcttttattcttctcgtcaagtctaaacacatcaa 9407482  T

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Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 9416614 - 9416689
Alignment:
Q  26 aagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 101  Q
    |||||||| ||||||||||||||||||| |||||| |||||||| || | |||||| ||||| | |||||||||||    
T  9416614 aagaacaacaccctatcccctaaactcgtcaacttcacccattttttattcttctcgtcaagacagaacacatcaa 9416689  T

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Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 9336576 - 9336656
Alignment:
Q  21 tccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 101  Q
    ||||||||||||||||| |||| |||||| ||| || |||||||||  | ||||| ||||||||||| || ||||||||||    
T  9336576 tccccaagaacaaaaccttatctcctaaattcgtcagcttgacccaccttttctctttctcatcaagcctaaacacatcaa 9336656  T

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Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 101
Target Start/End: Original strand, 9343881 - 9343961
Alignment:
Q  21 tccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 101  Q
    |||||||||||||||| |||||||||||| | |  ||||| ||||| ||||||||| ||||||||||  | ||||||||||    
T  9343881 tccccaagaacaaaacactatcccctaaagttgttaacttcacccacttcttctccatctcatcaagcttaaacacatcaa 9343961  T

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Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 9626552 - 9626488
Alignment:
Q  29 aacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaa 93  Q
    ||||||||||||||||||||| ||  ||| || |||||||||||||||||||||| || ||||||    
T  9626552 aacaaaaccctatcccctaaattcatcaaattcacccatttcttctccttctcatgaaatctgaa 9626488  T

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Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 9756424 - 9756502
Alignment:
Q  29 aacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaagcttta 107  Q
    ||||||||||||||||| ||| || |||||||||||||  | ||||| ||||||||||| ||  ||||||||| |||||    
T  9756424 aacaaaaccctatcccccaaattcaccaacttgacccaccttttctctttctcatcaagcctatacacatcaatcttta 9756502  T

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Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 9432939 - 9433012
Alignment:
Q  28 gaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 101  Q
    ||||||||||||||| |||||| ||   | ||| ||||| ||| |||||||||||||||||||||| |||||||    
T  9432939 gaacaaaaccctatctcctaaattcttgatcttcacccacttcctctccttctcatcaagtctgaaaacatcaa 9433012  T

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Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 9617536 - 9617463
Alignment:
Q  28 gaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 101  Q
    |||||||||||||||||||||| |   |||||| |||||||||||||| ||||||| ||  |||||||| ||||    
T  9617536 gaacaaaaccctatcccctaaatttttcaacttcacccatttcttctctttctcatgaaacctgaacacttcaa 9617463  T

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Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 9425614 - 9425686
Alignment:
Q  26 aagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacat 98  Q
    |||||||||||||||| || |||||||  |||||| |||||||| || | |||||| |||||||| |||||||    
T  9425614 aagaacaaaaccctattccttaaactcatcaacttcacccattttttattcttctcgtcaagtctaaacacat 9425686  T

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Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 9686751 - 9686799
Alignment:
Q  53 gccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 101  Q
    |||||||||||||| |||||||| ||||||||||| ||||| |||||||    
T  9686751 gccaacttgacccacttcttctcgttctcatcaagcctgaatacatcaa 9686799  T

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Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 9340718 - 9340772
Alignment:
Q  32 aaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaa 86  Q
    |||||||||||||| ||| ||  |||||| ||||| |||||||||||||||||||    
T  9340718 aaaaccctatccccgaaattcctcaacttcacccacttcttctccttctcatcaa 9340772  T

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Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 9395298 - 9395375
Alignment:
Q  24 ccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 101  Q
    ||||||||||||||  ||| |||||| | | |||||| ||||| || |||| |||||||||||| || ||||||||||    
T  9395298 ccaagaacaaaaccaaatctcctaaattagtcaacttcacccactttttctgcttctcatcaagcctaaacacatcaa 9395375  T

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Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 9441856 - 9441815
Alignment:
Q  26 aagaacaaaaccctatcccctaaactcgccaacttgacccat 67  Q
    |||||||||||||||||||||||||||  |||||| ||||||    
T  9441856 aagaacaaaaccctatcccctaaactcatcaacttcacccat 9441815  T

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Target: chr8 (Bit Score: 118; Significance: 2e-60; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 41 - 206
Target Start/End: Complemental strand, 13170744 - 13170579
Alignment:
Q  41 tcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaagctttaaaccatcttcaccagggaaaccaaaacaatgag 140  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||  ||| |||||    
T  13170744 tcccctaaactcgccaacttgacccatttcttctccttttcatcaagtctgaacacatcaagctttaaaccatattcaccagggaaaccgtaacgatgag 13170645  T
Q  141 agtcatatatgtctactagcaacaactcacgctcactctctaccaggaatttcatgtcccctccat 206  Q
     |||||| ||||| |||||||||||||||| ||| ||||| |||| ||||||||||||||||||||    
T  13170644 ggtcatagatgtccactagcaacaactcaccctcgctctcgaccaagaatttcatgtcccctccat 13170579  T

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Target: chr8; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 21 - 206
Target Start/End: Complemental strand, 44688865 - 44688680
Alignment:
Q  21 tccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaagctttaaaccatcttcacc 120  Q
    |||||||||||||||  |||| |||||||||||  ||||| ||||||||||| | ||||||||  ||  ||||||||||||||  || ||||||||||||    
T  44688865 tccccaagaacaaaattctattccctaaactcgttaactttacccatttcttatgcttctcattgagcgtgaacacatcaagccgtagaccatcttcacc 44688766  T
Q  121 agggaaaccaaaacaatgagagtcatatatgtctactagcaacaactcacgctcactctctaccaggaatttcatgtcccctccat 206  Q
     ||||| ||||||| |||||||||||| ||||| ||||||||||||||||  |||||||||||||||||||| |||||||||||||    
T  44688765 cgggaacccaaaaccatgagagtcatagatgtccactagcaacaactcaccttcactctctaccaggaattttatgtcccctccat 44688680  T

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Target: chr1 (Bit Score: 48; Significance: 1e-18; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 18991335 - 18991422
Alignment:
Q  119 ccagggaaaccaaaacaatgagagtcatatatgtctactagcaacaactcacgctcactctctaccaggaatttcatgtcccctccat 206  Q
    |||||||| ||||||||||| |||||| | ||||| ||||||||||||||||  |||| |||||||| ||||||||| ||||||||||    
T  18991335 ccagggaacccaaaacaatgcgagtcacagatgtccactagcaacaactcaccttcacactctaccaagaatttcatatcccctccat 18991422  T

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Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 8814441 - 8814385
Alignment:
Q  22 ccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctcctt 78  Q
    |||||| |||||||| |||||||||||| |||||||||| ||||| |||||||||||    
T  8814441 ccccaaaaacaaaactctatcccctaaattcgccaacttcacccacttcttctcctt 8814385  T

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Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 235250 - 235311
Alignment:
Q  22 ccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcat 83  Q
    ||||||||| ||||| |||||||||||| | |||||||| ||||| ||||||||||| ||||    
T  235250 ccccaagaagaaaactctatcccctaaatttgccaacttcacccacttcttctccttttcat 235311  T

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Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 251473 - 251412
Alignment:
Q  22 ccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcat 83  Q
    ||||||||||||||| |||||||||| | |||||||||| ||||| ||||| ||||| ||||    
T  251473 ccccaagaacaaaactctatcccctatattcgccaactttacccacttcttttccttttcat 251412  T

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Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 4428667 - 4428742
Alignment:
Q  21 tccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacac 96  Q
    ||||||| ||||||||||||||||| ||||||| ||| || ||||||||   | ||||||||||||| || |||||    
T  4428667 tccccaaaaacaaaaccctatcccccaaactcgtcaatttcacccatttacgcgccttctcatcaagcctaaacac 4428742  T

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Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 246904 - 246958
Alignment:
Q  22 ccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctcc 76  Q
    |||||||||||||||  |||| |||||| | |||||||| |||||||||||||||    
T  246904 ccccaagaacaaaactgtatctcctaaattagccaacttcacccatttcttctcc 246958  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 231618 - 231674
Alignment:
Q  22 ccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctcctt 78  Q
    |||||||||||||||  ||||||||||| | |||||||| ||||| ||| |||||||    
T  231618 ccccaagaacaaaactatatcccctaaattagccaacttcacccacttcatctcctt 231674  T

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Target: chr6 (Bit Score: 47; Significance: 5e-18; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 7041534 - 7041612
Alignment:
Q  23 cccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 101  Q
    ||||||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||| |||| | |||| |||||    
T  7041534 cccaagaacaaaaccctatcccctaaactagtcaacttcacccacttcttctccttctcattaagtttaaacaaatcaa 7041612  T

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Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 7025793 - 7025854
Alignment:
Q  22 ccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcat 83  Q
    ||||||||||||||||||||| |||||||||| |||||| ||||| ||||||||||||||||    
T  7025793 ccccaagaacaaaaccctatctcctaaactcgtcaacttcacccacttcttctccttctcat 7025854  T

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Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 7029850 - 7029911
Alignment:
Q  22 ccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcat 83  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||||||||||    
T  7029850 ccccaagaacaaaaccctatccccgaaactcgtcaacttcacccacttcttctccttctcat 7029911  T

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Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 9170854 - 9170915
Alignment:
Q  22 ccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcat 83  Q
    ||||||||||||||||||||||||||||||||  || || ||||| ||||||||||||||||    
T  9170854 ccccaagaacaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctcat 9170915  T

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Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 9159574 - 9159515
Alignment:
Q  22 ccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctc 81  Q
    ||||||||||||||||||||||||||||||||  || || ||||| ||||||||||||||    
T  9159574 ccccaagaacaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctc 9159515  T

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Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 7046875 - 7046937
Alignment:
Q  21 tccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcat 83  Q
    ||||||||||||||||  |||||||||||||||  ||||| ||||| ||||||||||||||||    
T  7046875 tccccaagaacaaaactttatcccctaaactcgttaacttcacccacttcttctccttctcat 7046937  T

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Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 7012857 - 7012918
Alignment:
Q  22 ccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcat 83  Q
    |||||||||||||| |||||| |||||||| | |||||| ||||| ||||||||||||||||    
T  7012857 ccccaagaacaaaatcctatctcctaaacttgtcaacttcacccacttcttctccttctcat 7012918  T

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Target: chr2 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 20694381 - 20694304
Alignment:
Q  21 tccccaagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacat 98  Q
    ||||||| ||||||||||||||||| ||||| | |||  | ||||||||||||||||| |||||||| ||||||||||    
T  20694381 tccccaaaaacaaaaccctatcccccaaacttgtcaaactcacccatttcttctccttttcatcaagcctgaacacat 20694304  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 18571165 - 18571213
Alignment:
Q  39 tatcccctaaactcgccaacttgacccatttcttctccttctcatcaag 87  Q
    ||||||||||||||| ||| || ||||| ||||||||||||||||||||    
T  18571165 tatcccctaaactcgtcaatttcacccacttcttctccttctcatcaag 18571213  T

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Target: chr7 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 450186 - 450111
Alignment:
Q  26 aagaacaaaaccctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 101  Q
    ||||||||||   |||| |||||| ||  |||||||||||| || ||||||||||||||||| || ||||||||||    
T  450186 aagaacaaaattgtatctcctaaattcctcaacttgacccactttttctccttctcatcaagcctaaacacatcaa 450111  T

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