View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10481A_low_670 (Length: 216)
Name: NF10481A_low_670
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10481A_low_670 |
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Alignment Details
Target: chr5 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 45 - 199
Target Start/End: Complemental strand, 32830901 - 32830747
Alignment:
| Q |
45 |
tttatttgtgattgttgcattagatttaattgtatatttgctatttggatttatgcagggtcaaaaagaaggaatgcattctgttatacatgttcaaaaa |
144 |
Q |
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| T |
32830901 |
tttatttgtgattgttgcattagatttaattgtatatttgctatttggatttatgcagggtcaaaaagaaggaatgcattctgttatacatgttcaaaaa |
32830802 |
T |
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| Q |
145 |
ctacttgatcaattttcatgtggaaatgaccatgccttgaaggttctcccttcat |
199 |
Q |
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| T |
32830801 |
ctacttgatcaattttcatgtggaaatgaccatgccttgaaggttctcccttcat |
32830747 |
T |
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