View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10481A_low_683 (Length: 214)
Name: NF10481A_low_683
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10481A_low_683 |
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Alignment Details
Target: chr2 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 14 - 203
Target Start/End: Complemental strand, 45724384 - 45724195
Alignment:
| Q |
14 |
ggacatcacctacgccacaaccctctgtttttcttctacaatcctattaactatttaattaattaactaaaaaattgttattaaacgaatgttgaaatca |
113 |
Q |
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| T |
45724384 |
ggacatcacctacgccacaaccctctgtttttcttctacaatcctattaattatttaattaattaactaaaaaattgttattaaacgaatgttgaaatca |
45724285 |
T |
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| Q |
114 |
gtttatagaaacttacccctaatttatgggtaatcaatcaattttttcttttcttgtcctatattcattcgttaaagggcaacaccaaac |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
45724284 |
gtttatagaaacttacccctaatttatgggtaatcaatcaattttttcttttcttgtcctatattcattcgttaaagggcaacacaaaac |
45724195 |
T |
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