View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10481A_low_69 (Length: 398)
Name: NF10481A_low_69
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10481A_low_69 |
 |  |
|
| [»] scaffold0491 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 12)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 1602686 - 1602947
Alignment:
| Q |
1 |
atgaattggcgtgtgagaatgagaatgagagtgattgaagaggtcacagaatatcattataaaggttttcgatgggtcattcattagatctcaagaaaaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
1602686 |
atgaattggcgtgtgagaatgagaatgagagtgattgacgaggtcacagaatatcattataaaggttttcaatgg-tcattcattagatctcaagaaaaa |
1602784 |
T |
 |
| Q |
101 |
gagtatgaacttgatcaaatatttaatttcaaatttctttggttcaaaaatgtggatgctcttttttcttatttgggatttgatcgtgggaattgaatct |
200 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
1602785 |
gagtatgaacttgatcaaatatttagtttcaaatttctttggttcaaaaatatggatgctcttttttcttatttgggatttgattgtgggaattcaatct |
1602884 |
T |
 |
| Q |
201 |
gctgctactgtgacatc---tcaacttcaaatggaagaaaatgctatattgaatagtggatgg |
260 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
1602885 |
gctgctactgtgacatctcatcaacttcaaatggaagcaaatgctatattgaatagtggatgg |
1602947 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 132 - 392
Target Start/End: Complemental strand, 1543131 - 1542871
Alignment:
| Q |
132 |
aatttctttggttcaaaaatgtggatgctcttttttcttatttgggatttgatcgtgggaattgaatctgctgctactgtgacatctcaacttcaaatgg |
231 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| || ||| | |||||| || |||| | ||||| || | ||||||||||||||||||||||||| |
|
|
| T |
1543131 |
aatttctttggttcaaacatgtggatgctcttttttcctacttgcggtttgattgtcggaactcaatctactcccactgtgacatctcaacttcaaatgg |
1543032 |
T |
 |
| Q |
232 |
aagaaaatgctatattgaatagtggatggtggaatgtgtatgatgcacgcttcattattcgtgatcgttgtaattggcaagccataacttgcaacgaggc |
331 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
1543031 |
aagcaaatgctatattgaatagtggatggtggaatgtgtatgatgcacgcttcattattcgtgatcgttgtaattggaaagccataacttgcaacgaggc |
1542932 |
T |
 |
| Q |
332 |
tggaagcataatagcaattgacgtatacaatgatgattacgaagaagttgcgtgggggaat |
392 |
Q |
| |
|
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
1542931 |
tggaagcataatagcaattgacatatccaatgatgattacgaagaagttgcgtgggggaat |
1542871 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 132 - 392
Target Start/End: Original strand, 1104294 - 1104557
Alignment:
| Q |
132 |
aatttctttggttcaaaaatgtggatgctcttttttcttatttgggatttgatcgtgggaattgaatctgctgctactgtgacatctca---acttcaaa |
228 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||| |||||| | |||||| || |||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
1104294 |
aatttctttggttcaaacatgtggatgctcttttttcctatttgcggtttgattgttggaattgaatctgctgctactgtgacatctcatcaacttcaaa |
1104393 |
T |
 |
| Q |
229 |
tggaagaaaatgctatattgaatagtggatggtggaatgtgtatgatgcacgcttcattattcgtgatcgttgtaattggcaagccataacttgcaacga |
328 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1104394 |
tggaagcaaatgctatattgaatagtggatggtggaatgtgtctgatgcacgcttcattattcgtgatcgttgtaattggcaagccataacttgcaacgt |
1104493 |
T |
 |
| Q |
329 |
ggctggaagcataatagcaattgacgtatacaatgatgattacgaagaagttgcgtgggggaat |
392 |
Q |
| |
|
|||||||||||||| || ||||| | |||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
1104494 |
ggctggaagcataaaagaaattgtcatatacaatgatgattatgaaaaagttgcgtgggggaat |
1104557 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 117 - 342
Target Start/End: Complemental strand, 1559207 - 1558982
Alignment:
| Q |
117 |
aaatatttaatttcaaatttctttggttcaaaaatgtggatgctcttttttcttatttgggatttgatcgtgggaattgaatctgctgctactgtgacat |
216 |
Q |
| |
|
|||||| |||||||||||||| ||||| ||||||||| ||| |||| || ||||||| |||||| ||||||| | |||| ||||| |||||||||| |
|
|
| T |
1559207 |
aaatatataatttcaaatttccttggtccaaaaatgttgattgcctttcttattatttgcagtttgattgtgggaactcaatccgctgccactgtgacat |
1559108 |
T |
 |
| Q |
217 |
ctcaacttcaaatggaagaaaatgctatattgaatagtggatggtggaatgtgtatgatgcacgcttcattattcgtgatcgttgtaattggcaagccat |
316 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||||||||||||||| | ||||||||| |||| ||| |||||||||||||||||| | || |
|
|
| T |
1559107 |
ctcaacttcaaatggaagcaaatgctatatcgaatagtggatggtggaacacctctgatgcacgattcaatatctctgatcgttgtaattggcatgatat |
1559008 |
T |
 |
| Q |
317 |
aacttgcaacgaggctggaagcataa |
342 |
Q |
| |
|
| ||||||||| | ||||||||||| |
|
|
| T |
1559007 |
atgttgcaacgatgatggaagcataa |
1558982 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 75 - 342
Target Start/End: Original strand, 1087023 - 1087290
Alignment:
| Q |
75 |
ggtcattcattagatctcaagaaaaagagtatgaacttgatcaaatatttaatttcaaatttctttggttcaaaaatgtggatgctcttttttcttattt |
174 |
Q |
| |
|
||||||||||||||||| ||| |||| |||||||| | ||||||||| ||||||||||||||| | ||||||||||||| |||| || |||||| |
|
|
| T |
1087023 |
ggtcattcattagatctaaagcaaaaatttatgaactacacaaaatatttagtttcaaatttctttgatccaaaaatgtggattgcctttcttattattt |
1087122 |
T |
 |
| Q |
175 |
gggatttgatcgtgggaattgaatctgctgctactgtgacatctcaacttcaaatggaagaaaatgctatattgaatagtggatggtggaatgtgtatga |
274 |
Q |
| |
|
| |||||| ||||||| | |||||||||| ||| |||||||||||||||||||||||| |||||||||| | || |||||||||||||| | ||| |
|
|
| T |
1087123 |
gcagtttgattgtgggaactcaatctgctgccactatgacatctcaacttcaaatggaagcaaatgctataataaagagtggatggtggaacacttctga |
1087222 |
T |
 |
| Q |
275 |
tgcacgcttcattattcgtgatcgttgtaattggcaagccataacttgcaacgaggctggaagcataa |
342 |
Q |
| |
|
|||||| |||| ||| |||||||||||||||||| | ||| |||||||| | ||||||||||| |
|
|
| T |
1087223 |
tgcacgtttcaatatatctgatcgttgtaattggcatgatatattttgcaacggtgttggaagcataa |
1087290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 132 - 349
Target Start/End: Complemental strand, 1552440 - 1552223
Alignment:
| Q |
132 |
aatttctttggttcaaaaatgtggatgctcttttttcttatttgggatttgatcgtgggaattgaatctgctgctactgtgacatctcaacttcaaatgg |
231 |
Q |
| |
|
|||||||||||| ||||||||||||| |||| || |||||| | |||||| | |||| | | ||| |||||||||||||||||||||||||||||| |
|
|
| T |
1552440 |
aatttctttggtccaaaaatgtggattgcctttcttactatttgcggtttgattatcggaactcagtcttctgctactgtgacatctcaacttcaaatgg |
1552341 |
T |
 |
| Q |
232 |
aagaaaatgctatattgaatagtggatggtggaatgtgtatgatgcacgcttcattattcgtgatcgttgtaattggcaagccataacttgcaacgaggc |
331 |
Q |
| |
|
||| |||||| ||||| ||||||||||||||||| || ||| ||| |||||| || ||||||||||| |||| | | ||| ||||||||| || |
|
|
| T |
1552340 |
aagcaaatgcaatattaaatagtggatggtggaacacgtctgaagcatgcttcaacatctctgatcgttgtacttgggatgatatattttgcaacgacgc |
1552241 |
T |
 |
| Q |
332 |
tggaagcataatagcaat |
349 |
Q |
| |
|
||||||||||| |||||| |
|
|
| T |
1552240 |
tggaagcataaaagcaat |
1552223 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 1594525 - 1594599
Alignment:
| Q |
78 |
cattcattagatctcaagaaaaagagtatgaacttgatcaaatatttaatttcaaatttctttggttcaaaaatg |
152 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
1594525 |
cattcattagatctcaagaaaaaaaatatgaacttgagaaaatatttaatttcaaattcctttggtccaaaaatg |
1594599 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 105 - 266
Target Start/End: Original strand, 2319586 - 2319744
Alignment:
| Q |
105 |
atgaacttgatcaaatatttaatttcaaatttctttggttcaaaaatgtggatgctcttttttcttatttgggatttgatcgtgggaattgaatctgctg |
204 |
Q |
| |
|
||||||||||| ||||| ||| |||| ||||||| |||| |||||||||||| ||||| ||||||||||| ||| || ||||| | | ||||||| |
|
|
| T |
2319586 |
atgaacttgataaaatacttagtttccaatttctatggtcagaaaatgtggatggtctttcttcttatttggcctttcattgtgggtactcaatctgc-- |
2319683 |
T |
 |
| Q |
205 |
ctactgtgacatctcaacttcaaatggaagaaaatgctatattgaatagtggatggtggaat |
266 |
Q |
| |
|
|| | ||||||||||||| ||| ||||||| |||||| ||||| |||||||||||||||||| |
|
|
| T |
2319684 |
ct-cagtgacatctcaacctcatatggaagcaaatgcgatattaaatagtggatggtggaat |
2319744 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 265
Target Start/End: Original strand, 2336056 - 2336106
Alignment:
| Q |
215 |
atctcaacttcaaatggaagaaaatgctatattgaatagtggatggtggaa |
265 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
2336056 |
atctcaacttcaaatggaagcaaatgctataatgaatagtggatggtggaa |
2336106 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 3957021 - 3956966
Alignment:
| Q |
210 |
gtgacatctcaacttcaaatggaagaaaatgctatattgaatagtggatggtggaa |
265 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||| | ||||||| ||||||||| |
|
|
| T |
3957021 |
gtgacatctcaacttcaaatggaagcaaatgcaatactaaatagtgaatggtggaa |
3956966 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 55 - 100
Target Start/End: Original strand, 1100123 - 1100167
Alignment:
| Q |
55 |
cattataaaggttttcgatgggtcattcattagatctcaagaaaaa |
100 |
Q |
| |
|
||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
1100123 |
cattataaaggtttttgatgg-tcattcattagatctcaagaaaaa |
1100167 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 266
Target Start/End: Original strand, 3851686 - 3851742
Alignment:
| Q |
210 |
gtgacatctcaacttcaaatggaagaaaatgctatattgaatagtggatggtggaat |
266 |
Q |
| |
|
||||||||||||||||||||||||| |||||| || | |||||||||| ||||||| |
|
|
| T |
3851686 |
gtgacatctcaacttcaaatggaagcaaatgcagtagtcaatagtggattgtggaat |
3851742 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0491 (Bit Score: 96; Significance: 6e-47; HSPs: 2)
Name: scaffold0491
Description:
Target: scaffold0491; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 77 - 349
Target Start/End: Complemental strand, 7954 - 7682
Alignment:
| Q |
77 |
tcattcattagatctcaagaaaaag---agtatgaacttgatcaaatatttaatttcaaatttctttggttcaaaaatgtggatgctcttttttcttatt |
173 |
Q |
| |
|
|||||||||||||||||| ||||| | ||||| ||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| |
|
|
| T |
7954 |
tcattcattagatctcaaaaaaaaatatattatgagcttgaaaaaatatttaatttcaaatttctttggtccaaaaatgtggatggtctttcttcttatt |
7855 |
T |
 |
| Q |
174 |
tgggatttgatcgtgggaattgaatctgctgctactgtgacatctcaacttcaaatggaagaaaatgctatattgaatagtggatggtggaatgtgtatg |
273 |
Q |
| |
|
|| | |||| | | ||||| | ||| |||| || |||||||||||||||||||||||| |||||||||||| ||||||||||||||||| | || |
|
|
| T |
7854 |
tgcggtttggttgagggaactcaat---ctgccacaatgacatctcaacttcaaatggaagcaaatgctatattaaatagtggatggtggaacacttctg |
7758 |
T |
 |
| Q |
274 |
atgcacgcttcattattcgtgatcgttgtaattggcaagccataacttgcaacgaggctggaagcataatagcaat |
349 |
Q |
| |
|
||||| ||||| ||| | |||||||||||||||| | ||| |||||||||| |||||||||||||||||||| |
|
|
| T |
7757 |
atgcaaacttcaatatctctaatcgttgtaattggcatggtatatcttgcaacgatgctggaagcataatagcaat |
7682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0491; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 350
Target Start/End: Complemental strand, 3343 - 3051
Alignment:
| Q |
59 |
ataaaggttttcgatgggtcattcattagatctca-agaaaaagagtatgaacttgatcaaatatttaatttcaaatttctttggttcaaaaatgtggat |
157 |
Q |
| |
|
||||||||||| ||||| |||||||| | |||||| ||||||| |||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
3343 |
ataaaggtttttgatgg-tcattcatcacatctcatagaaaaaa--tatgaacttgataaaatatttagtttcaaatttctttggtccaaaaatgtggat |
3247 |
T |
 |
| Q |
158 |
gctcttttttctt---atttgggatttgatcgtgggaattgaatctgctgctactgtgacatc---tcaacttcaaatggaagaaaatgctatattgaat |
251 |
Q |
| |
|
| ||||| ||||| ||||| | |||| | | ||||| | ||| |||| || ||||||| ||||||||||||||||| |||||||||||| ||| |
|
|
| T |
3246 |
ggtctttcttcttataatttgtggtttggttgagggaactcaat---ctgccacaatgacatctcatcaacttcaaatggaagcaaatgctatattaaat |
3150 |
T |
 |
| Q |
252 |
agtggatggtggaatgtgtatgatgcacgcttcattattcgtgatcgttgtaattggcaagccataacttgcaacgaggctggaagcataatagcaatt |
350 |
Q |
| |
|
|||||||||||||| | ||||||| ||||| ||| |||||||||| || |||| | ||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
3149 |
agtggatggtggaacacttctgatgcaaacttcaatatctctgatcgttgtcatgggcatggtatattttgcaacgatgctggaagcataatagcaatt |
3051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 59 - 350
Target Start/End: Complemental strand, 18751594 - 18751305
Alignment:
| Q |
59 |
ataaaggttttcgatgggtcattcattagatctca-agaaaaagagtatgaacttgatcaaatatttaatttcaaatttctttggttcaaaaatgtggat |
157 |
Q |
| |
|
||||||||||| ||||| |||||||| | |||||| ||||||| |||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
18751594 |
ataaaggtttttgatgg-tcattcatcacatctcatagaaaaaa--tatgaacttgataaaatatttagtttcaaatttctttggtccaaaaatgtggat |
18751498 |
T |
 |
| Q |
158 |
gctcttttttcttatttgggatttgatcgtgggaattgaatctgctgctactgtgacatc---tcaacttcaaatggaagaaaatgctatattgaatagt |
254 |
Q |
| |
|
| ||||| |||||||||| | |||| | | ||||| | ||| |||| || ||||||| ||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
18751497 |
ggtctttcttcttatttgcggtttggttgagggaactcaat---ctgccacaatgacatctcatcaacttcaaatggaagcaaatgctatattaaatagt |
18751401 |
T |
 |
| Q |
255 |
ggatggtggaatgtgtatgatgcacgcttcattattcgtgatcgttgtaattggcaagccataacttgcaacgaggctggaagcataatagcaatt |
350 |
Q |
| |
|
||||||||||| | | ||||| ||||| ||| |||||||||| || |||| | ||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
18751400 |
ggatggtggaacacttcttatgcagacttcaatatctctgatcgttgtcatgggcatggtatattttgcaacgatgctggaagcataatagcaatt |
18751305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 350
Target Start/End: Complemental strand, 18741537 - 18741245
Alignment:
| Q |
59 |
ataaaggttttcgatgggtcattcattagatctca-agaaaaagagtatgaacttgatcaaatatttaatttcaaatttctttggttcaaaaatgtggat |
157 |
Q |
| |
|
||||||||||| ||||| |||||||| | |||||| ||||||| |||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
18741537 |
ataaaggtttttgatgg-tcattcatcacatctcatagaaaaaa--tatgaacttgataaaatatttagtttcaaatttctttggtccaaaaatgtggat |
18741441 |
T |
 |
| Q |
158 |
gctcttttttctt---atttgggatttgatcgtgggaattgaatctgctgctactgtgacatc---tcaacttcaaatggaagaaaatgctatattgaat |
251 |
Q |
| |
|
| ||||| ||||| ||||| | |||| | | ||||| | ||| |||| || ||||||| ||||||||||||||||| |||||||||||| ||| |
|
|
| T |
18741440 |
ggtctttcttcttataatttgtggtttggttgagggaactcaat---ctgccacaatgacatctcatcaacttcaaatggaagcaaatgctatattaaat |
18741344 |
T |
 |
| Q |
252 |
agtggatggtggaatgtgtatgatgcacgcttcattattcgtgatcgttgtaattggcaagccataacttgcaacgaggctggaagcataatagcaatt |
350 |
Q |
| |
|
|||||||||||||| | ||||||| ||||| ||| |||||||||| || |||| | ||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
18741343 |
agtggatggtggaacacttctgatgcaaacttcaatatctctgatcgttgtcatgggcatggtatattttgcaacgatgctggaagcataatagcaatt |
18741245 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 59 - 350
Target Start/End: Complemental strand, 18746501 - 18746209
Alignment:
| Q |
59 |
ataaaggttttcgatgggtcattcattagatctca-agaaaaagagtatgaacttgatcaaatatttaatttcaaatttctttggttcaaaaatgtggat |
157 |
Q |
| |
|
||||||||||| ||||| |||||||| | |||||| ||||||| |||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
18746501 |
ataaaggtttttgatgg-tcattcatcacatctcatagaaaaaa--tatgaacttgataaaatatttagtttcaaatttctttggtccaaaaatgtggat |
18746405 |
T |
 |
| Q |
158 |
gctcttttttctt---atttgggatttgatcgtgggaattgaatctgctgctactgtgacatc---tcaacttcaaatggaagaaaatgctatattgaat |
251 |
Q |
| |
|
| ||||| ||||| ||||| | |||| | | ||||| | ||| |||| || ||||||| ||||||||||||||||| |||||||||||| ||| |
|
|
| T |
18746404 |
ggtctttcttcttataatttgtggtttggttgagggaactcaat---ctgccacaatgacatctcatcaacttcaaatggaagcaaatgctatattaaat |
18746308 |
T |
 |
| Q |
252 |
agtggatggtggaatgtgtatgatgcacgcttcattattcgtgatcgttgtaattggcaagccataacttgcaacgaggctggaagcataatagcaatt |
350 |
Q |
| |
|
|||||||||||||| | ||||||| ||||| ||| |||||||||| || |||| | ||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
18746307 |
agtggatggtggaacacttctgatgcaaacttcaatatctctgatcgttgtcatgggcatggtatattttgcaacgatgctggaagcataatagcaatt |
18746209 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 76 - 265
Target Start/End: Complemental strand, 18755694 - 18755503
Alignment:
| Q |
76 |
gtcattcattagatctcaagaaa-aagagtatgaacttgatcaaatatttaatttcaaatttctttggttcaaaaatgtgga-tgctcttttttcttatt |
173 |
Q |
| |
|
||||||||||||||||| ||||| || | | |||||||| ||||||||| ||||||||||| ||||| |||| ||||||| ||| |||| |||||||| |
|
|
| T |
18755694 |
gtcattcattagatctcgagaaagaaaaaaaagaacttgacaaaatatttagtttcaaatttcattggtccaaatatgtggaatgc-ctttcttcttatt |
18755596 |
T |
 |
| Q |
174 |
tgggatttgatcgtgggaattgaatctgctgctactgtgacatctcaacttcaaatggaagaaaatg-ctatattgaatagtggatggtggaa |
265 |
Q |
| |
|
|||| | |||||| ||||| | ||||| |||||| |||||| |||| |||||||||||| ||||| ||||||| || ||||||||||||| |
|
|
| T |
18755595 |
tggggtgtgatcgagggaactcaatcttttgctacaatgacatatcaatttcaaatggaagcaaatgcctatattaaaccgtggatggtggaa |
18755503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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