View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10481A_low_699 (Length: 210)

Name: NF10481A_low_699
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10481A_low_699
NF10481A_low_699
[»] scaffold0055 (17 HSPs)
scaffold0055 (14-199)||(12327-12512)
scaffold0055 (14-199)||(34401-34585)
scaffold0055 (14-199)||(53573-53757)
scaffold0055 (14-172)||(35525-35682)
scaffold0055 (22-199)||(43195-43376)
scaffold0055 (22-199)||(74581-74762)
scaffold0055 (22-184)||(55909-56075)
scaffold0055 (22-199)||(19643-19824)
scaffold0055 (14-90)||(11191-11267)
scaffold0055 (14-90)||(11363-11439)
scaffold0055 (14-90)||(30004-30080)
scaffold0055 (14-90)||(18699-18775)
scaffold0055 (14-90)||(30178-30254)
scaffold0055 (14-90)||(36570-36646)
scaffold0055 (14-90)||(44232-44308)
scaffold0055 (14-90)||(56957-57033)
scaffold0055 (14-90)||(75619-75695)
[»] scaffold0052 (16 HSPs)
scaffold0052 (14-199)||(72023-72208)
scaffold0052 (14-199)||(61479-61663)
scaffold0052 (22-199)||(3525-3706)
scaffold0052 (22-186)||(30306-30474)
scaffold0052 (22-199)||(53515-53696)
scaffold0052 (22-184)||(41556-41722)
scaffold0052 (22-199)||(18050-18231)
scaffold0052 (14-90)||(65985-66061)
scaffold0052 (14-90)||(73096-73172)
scaffold0052 (14-90)||(73268-73344)
scaffold0052 (14-90)||(2581-2657)
scaffold0052 (14-90)||(17117-17193)
scaffold0052 (14-90)||(40598-40674)
scaffold0052 (14-90)||(42522-42598)
scaffold0052 (14-90)||(54561-54637)
scaffold0052 (14-90)||(65811-65887)
[»] scaffold0021 (10 HSPs)
scaffold0021 (16-186)||(95798-95968)
scaffold0021 (13-186)||(39258-39430)
scaffold0021 (22-199)||(49187-49368)
scaffold0021 (40-199)||(34511-34669)
scaffold0021 (14-186)||(50265-50436)
scaffold0021 (13-90)||(41063-41140)
scaffold0021 (15-87)||(40899-40971)
scaffold0021 (14-90)||(51404-51480)
scaffold0021 (14-90)||(51576-51652)
scaffold0021 (14-88)||(40724-40798)
[»] scaffold0152 (6 HSPs)
scaffold0152 (14-184)||(19161-19330)
scaffold0152 (14-184)||(33382-33551)
scaffold0152 (14-184)||(37987-38156)
scaffold0152 (14-90)||(28259-28335)
scaffold0152 (14-90)||(37035-37111)
scaffold0152 (14-90)||(18207-18283)
[»] scaffold0515 (2 HSPs)
scaffold0515 (14-184)||(11591-11760)
scaffold0515 (14-90)||(10639-10715)
[»] chr6 (1 HSPs)
chr6 (14-184)||(9477454-9477623)
[»] chr5 (1 HSPs)
chr5 (15-173)||(21098509-21098666)
[»] scaffold1084 (1 HSPs)
scaffold1084 (14-90)||(2879-2955)


Alignment Details
Target: scaffold0055 (Bit Score: 162; Significance: 1e-86; HSPs: 17)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 12512 - 12327
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12512 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattcgccgaagaaacgaaaaa 12413  T
Q  114 gcaaaccccccgtttggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtctggaccagcccgcg 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||| |||||    
T  12412 gcaaaccccccgtttggctcccgaattgcaaaatgccaccttgccttggcttggcatgggcaggggaaggtctagtccaggccgcg 12327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 34401 - 34585
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 113  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34401 ggacatcgtaaggacctccagcgagaaattttagcaaattttcacgtgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaa 34500  T
Q  114 gcaaaccccccgtttggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtctggaccagcccgcg 199  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||| |||||    
T  34501 gcaaa-cccccgtttggctcccgaattgcaaaatgccaccttgccttggcttggcatgggcaggggaaggtctagtccaggccgcg 34585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 53573 - 53757
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 113  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  53573 ggacatcgtaaggacctccagcgagaaattttagcaaattttcacgtgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaa 53672  T
Q  114 gcaaaccccccgtttggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtctggaccagcccgcg 199  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||| |||||    
T  53673 gcaaa-cccccgtttggctcccgaattgcaaaatgccaccttgccttggcttggcatgggcaggggaaggtctagtccaggccgcg 53757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #4
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 35525 - 35682
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 113  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35525 ggacatcgtaaggacctccagcgagaaattttagcaaattttcacgtgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaa 35624  T
Q  114 gcaaaccccccgtttggctccggaattgcaaaatgccaccttgccctggcttggcatgg 172  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  35625 gcaaa-cccccgtttggctcccgaattgcaaaatgccaccttgccttggcttggcatgg 35682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #5
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 43195 - 43376
Alignment:
Q  22 taaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 121  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  43195 taaggacctccagcgagaaattttggcaaatttgcacgcgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaa-cc 43293  T
Q  122 cccgtttggctccggaattgcaaaatgccaccttgc-----cctggcttggcatgggcaggggaaggtctggaccagcccgcg 199  Q
    ||||||||||||| ||||||||||||||||||||||     | ||||||||||||||||||||||||||| | |||| |||||    
T  43294 cccgtttggctcccgaattgcaaaatgccaccttgccttggcttggcttggcatgggcaggggaaggtctagtccaggccgcg 43376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #6
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 74581 - 74762
Alignment:
Q  22 taaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 121  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  74581 taaggacctccagcgagaaattttggcaaatttgcacgcgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaa-cc 74679  T
Q  122 cccgtttggctccggaattgcaaaatgccaccttgc-----cctggcttggcatgggcaggggaaggtctggaccagcccgcg 199  Q
    ||||||||||||| ||||||||||||||||||||||     | ||||||||||||||||||||||||||| | |||| |||||    
T  74680 cccgtttggctcccgaattgcaaaatgccaccttgccttggcttggcttggcatgggcaggggaaggtctagtccaggccgcg 74762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #7
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 22 - 184
Target Start/End: Original strand, 55909 - 56075
Alignment:
Q  22 taaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 121  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  55909 taaggacctccagcgagaaattttggcaaatttgcacgcgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaa-cc 56007  T
Q  122 cccgtttggctccggaattgcaaaatgccaccttgc-----cctggcttggcatgggcaggggaaggt 184  Q
    | ||||||||||| ||||||||||||||||||||||     | |||||||||||||||||||||||||    
T  56008 ctcgtttggctcccgaattgcaaaatgccaccttgccttggcttggcttggcatgggcaggggaaggt 56075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #8
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 19824 - 19643
Alignment:
Q  22 taaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 121  Q
    |||||||||||||||||||||||| | |||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |    
T  19824 taaggacctccagcgagaaattttggaaaatttgcacgcgggattcgttaattgccaatattttaagcgtcattagccgaagaaacgaaaaagcaaac-c 19726  T
Q  122 cccgtttggctccggaattgcaaaatgccaccttgc-----cctggcttggcatgggcaggggaaggtctggaccagcccgcg 199  Q
    ||||||||||||| ||||||||||||||||||||||     | ||||||||||||||||||||||||||| | |||| |||||    
T  19725 cccgtttggctcccgaattgcaaaatgccaccttgccttggcttggcttggcatgggcaggggaaggtctagtccaggccgcg 19643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 11267 - 11191
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||||||||||||| || ||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||    
T  11267 ggacatcataaggaccttcaccgagaaattttggcaattttgcatgcgggaatcgttaactgcgaatattttaagcg 11191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 11439 - 11363
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||||||||||||| ||  |||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  11439 ggacatcataaggaccttcactgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatattttaagcg 11363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #11
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 30080 - 30004
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||||||||||||| || ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  30080 ggacatcataaggaccttcaccgagaaattttggcaattttgcacgcgggaatcgtaaactgcgaatattttaagcg 30004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 18775 - 18699
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||| ||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  18775 ggacatcgtaaggaccttctccgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatatcttaagcg 18699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 30254 - 30178
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||||||||||||| || ||||||||||  |||| |||||||||||||||||| ||||||||||||| ||||||    
T  30254 ggacatcataaggaccttcaccgagaaatttgggcaattttgcacgcgggaatcgtcaactgcgaatattctaagcg 30178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 36570 - 36646
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||| ||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  36570 ggacatcgtaaggaccttctccgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatatcttaagcg 36646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 44232 - 44308
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||| ||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  44232 ggacatcgtaaggaccttctccgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatatcttaagcg 44308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 56957 - 57033
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||| ||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  56957 ggacatcgtaaggaccttctccgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatatcttaagcg 57033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 75619 - 75695
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||||||||||||| |  ||||||||||| |||| |||||||| |||||||||||||||||||||| |||||||    
T  75619 ggacatcataaggaccttctccgagaaattttggcaattttgcacgtgggaatcgttaactgcgaatatcttaagcg 75695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 162; Significance: 1e-86; HSPs: 16)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 14 - 199
Target Start/End: Original strand, 72023 - 72208
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  72023 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattcgccgaagaaacgaaaaa 72122  T
Q  114 gcaaaccccccgtttggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtctggaccagcccgcg 199  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||| |||||    
T  72123 gcaaaccccccgtttggctcccgaattgcaaaatgccaccttgccttggcttggcatgggcaggggaaggtctagtccaggccgcg 72208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 61663 - 61479
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 113  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  61663 ggacatcgtaaggacctccagcgagaaattttagcaaattttcacgtgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaa 61564  T
Q  114 gcaaaccccccgtttggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtctggaccagcccgcg 199  Q
    |||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||| |||||    
T  61563 gcaaac-ccccgtttggctcccgaattgcaaaatgccaccttgccttggcttggcatgggcaggggaaggtctagtccaggccgcg 61479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 3706 - 3525
Alignment:
Q  22 taaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 121  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  3706 taaggacctccagcgagaaattttggcaaatttgcacgcgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaac-c 3608  T
Q  122 cccgtttggctccggaattgcaaaatgccaccttgc-----cctggcttggcatgggcaggggaaggtctggaccagcccgcg 199  Q
    ||||||||||||| ||||||||||||||||||||||     | ||||||||||||||||||||||||||| | |||| |||||    
T  3607 cccgtttggctcccgaattgcaaaatgccaccttgccttggcttggcttggcatgggcaggggaaggtctagtccaggccgcg 3525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #4
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 22 - 186
Target Start/End: Original strand, 30306 - 30474
Alignment:
Q  22 taaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 121  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  30306 taaggacctccagcgagaaattttggcaaatttgcacgcgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaa-cc 30404  T
Q  122 cccgtttggctccggaattgcaaaatgccaccttgccctgg-----cttggcatgggcaggggaaggtct 186  Q
    ||||||||||||| ||||||||||||||||||||||| |||     ||||||||||||||||||||||||    
T  30405 cccgtttggctcccgaattgcaaaatgccaccttgccttggctaaacttggcatgggcaggggaaggtct 30474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #5
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 53515 - 53696
Alignment:
Q  22 taaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 121  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  53515 taaggacctccagcgagaaattttggcaaatttgcacgcgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaa-cc 53613  T
Q  122 cccgtttggctccggaattgcaaaatgccaccttgc-----cctggcttggcatgggcaggggaaggtctggaccagcccgcg 199  Q
    | ||||||||||| ||||||||||||||||||||||     | ||||||||||||||||||||||||||| | |||| |||||    
T  53614 ctcgtttggctcccgaattgcaaaatgccaccttgccttggcttggcttggcatgggcaggggaaggtctagtccaggccgcg 53696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #6
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 22 - 184
Target Start/End: Complemental strand, 41722 - 41556
Alignment:
Q  22 taaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 121  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  41722 taaggacctccagcgagaaattttggcaaatttgcacgcgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaa-cc 41624  T
Q  122 cccgtttggctccggaattgcaaaatgccaccttgc-----cctggcttggcatgggcaggggaaggt 184  Q
    | ||||||||||| ||||||||||||||||||||||     | |||||||||||||||||||||||||    
T  41623 ctcgtttggctcccgaattgcaaaatgccaccttgccttggcttggcttggcatgggcaggggaaggt 41556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #7
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 18231 - 18050
Alignment:
Q  22 taaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 121  Q
    |||||||||||||||||||||||| | |||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |    
T  18231 taaggacctccagcgagaaattttggaaaatttgcacgcgggattcgttaattgccaatattttaagcgtcattagccgaagaaacgaaaaagcaaac-c 18133  T
Q  122 cccgtttggctccggaattgcaaaatgccaccttgc-----cctggcttggcatgggcaggggaaggtctggaccagcccgcg 199  Q
    ||||||||||||| ||||||||||||||||||||||     | ||||||||||||||||||||||||||| | |||| |||||    
T  18132 cccgtttggctcccgaattgcaaaatgccaccttgccttggcttggcttggcatgggcaggggaaggtctagtccaggccgcg 18050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 65985 - 66061
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||||||||||||| || ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  65985 ggacatcataaggaccttcaccgagaaattttggcaattttgcacgcgggaatcgtaaactgcgaatattttaagcg 66061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 73096 - 73172
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||||||||||||| ||  |||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  73096 ggacatcataaggaccttcactgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatattttaagcg 73172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 73268 - 73344
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||||||||||||| || ||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||    
T  73268 ggacatcataaggaccttcaccgagaaattttggcaattttgcatgcgggaatcgttaactgcgaatattttaagcg 73344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 2657 - 2581
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||| ||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  2657 ggacatcgtaaggaccttctccgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatatcttaagcg 2581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 17193 - 17117
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||| ||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  17193 ggacatcgtaaggaccttctccgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatatcttaagcg 17117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 40674 - 40598
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||| ||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  40674 ggacatcgtaaggaccttctccgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatatcttaagcg 40598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 42522 - 42598
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||||||||||||| |  ||||||||||| |||| |||||||| |||||||||||||||||||||| |||||||    
T  42522 ggacatcataaggaccttctccgagaaattttggcaattttgcacgtgggaatcgttaactgcgaatatcttaagcg 42598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 54561 - 54637
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||| ||||||||| |  ||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  54561 ggacatcgtaaggaccttctccgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatatcttaagcg 54637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 65811 - 65887
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||||||||||||| || ||||||||||  |||| |||||||||||||||||| ||||||||||||| ||||||    
T  65811 ggacatcataaggaccttcaccgagaaatttgggcaattttgcacgcgggaatcgtcaactgcgaatattctaagcg 65887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 143; Significance: 3e-75; HSPs: 10)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 16 - 186
Target Start/End: Original strand, 95798 - 95968
Alignment:
Q  16 acatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  95798 acatcataaggacctccagcgagaaattttagcaaatttgcacgcgggattcgttacttgcgaatattttaagcgtcattagccgaagaaacgaaaaagc 95897  T
Q  116 aaaccccccgtttggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtct 186  Q
    ||||||||||||||||||| ||||||||||||| ||||||||| |||||||||| ||||||||||||||||    
T  95898 aaaccccccgtttggctcccgaattgcaaaatgtcaccttgccttggcttggcacgggcaggggaaggtct 95968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 13 - 186
Target Start/End: Original strand, 39258 - 39430
Alignment:
Q  13 tggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaa 112  Q
    |||||||||  |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  39258 tggacatcaagaggacctccagcgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatattttaagctttattagccgaagaaacgaaaa 39357  T
Q  113 agcaaaccccccgtttggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtct 186  Q
    |||||| |||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39358 agcaaa-cccctgtttggctcccgaattgcaaaatgccaccttgccttggcttggcatgggcaggggaaggtct 39430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 22 - 199
Target Start/End: Original strand, 49187 - 49368
Alignment:
Q  22 taaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccc 121  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  49187 taaggacctccagcgagaaattttggcaaatttgcacgcgggattcgttaattgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaa-cc 49285  T
Q  122 cccgtttggctccggaattgcaaaatgccaccttgc-----cctggcttggcatgggcaggggaaggtctggaccagcccgcg 199  Q
    ||||||||||||| ||||||||||||||||||||||     | ||||||||||||||||||||||||||| | |||| |||||    
T  49286 cccgtttggctcccgaattgcaaaatgccaccttgccttggcttggcttggcatgggcaggggaaggtctagtccaggccgcg 49368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 40 - 199
Target Start/End: Original strand, 34511 - 34669
Alignment:
Q  40 aattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaagcaaaccccccgtttggctccggaat 139  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  34511 aattttggcaattttgcacgcgggaatcgttaactgcgaatattttaagcttcattagccgaagaaacgaaaaagcaaacccccc-tttggctcccgaat 34609  T
Q  140 tgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtctggaccagcccgcg 199  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| | |||| |||||    
T  34610 tgcaaaatgccaccttgccttggcttggcatgggcaggggaaggtctaggccaggccgcg 34669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 50265 - 50436
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 113  Q
    |||||||| ||||| |||||| |||| ||||| |||| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  50265 ggacatcaaaaggatctccagagagagattttggcaattatgcacgcggaaatcgttaactgcgaatattttaagcgtcattagctgaagaaacgaaaaa 50364  T
Q  114 gcaaaccccccgtttggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggtct 186  Q
    ||||| ||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  50365 gcaaa-cccccgtttggctcccgaattgcaacatgccaccttgccttggcttggcatgggcaggggaaggtct 50436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 13 - 90
Target Start/End: Original strand, 41063 - 41140
Alignment:
Q  13 tggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    |||||||||||||||||| || ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  41063 tggacatcataaggaccttcaccgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatattttaagcg 41140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 40899 - 40971
Alignment:
Q  15 gacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaa 87  Q
    |||||||||||||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  40899 gacatcataaggaccttcaccgagaaattttggcaagtttgcacgcgggaatcgttaactgcgaatattttaa 40971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 51404 - 51480
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||||||||||||| ||  |||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  51404 ggacatcataaggaccttcactgagaaattttggcaattttgcacgcgggaatcgttaactgcgaatattttaagcg 51480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 14 - 90
Target Start/End: Original strand, 51576 - 51652
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||||||||||||| || ||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||    
T  51576 ggacatcataaggaccttcaccgagaaattttggcaattttgcatgcgggaatcgttaactgcgaatattttaagcg 51652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 14 - 88
Target Start/End: Original strand, 40724 - 40798
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaag 88  Q
    ||||||||||||||||| || ||||||||||| || | |||||||| | ||||||||||||||||||||||||||    
T  40724 ggacatcataaggaccttcaccgagaaattttggcgattttgcacgagagaatcgttaactgcgaatattttaag 40798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 91; Significance: 3e-44; HSPs: 6)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 19330 - 19161
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 113  Q
    |||||||||||||||||||| ||||||||||| || |||||||||| |||| ||||| | |||||||||||||||||||| |||||||||||| ||||||    
T  19330 ggacatcataaggacctccaccgagaaattttggcgaatttgcacgtgggattcgtttattgcgaatattttaagcgtcaatagccgaagaaatgaaaaa 19231  T
Q  114 gcaaaccccccgtttggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggt 184  Q
     |||| ||||  ||||||||| ||||||||||||| | ||||||| ||||||||||||||||  |||||||    
T  19230 acaaa-ccccaatttggctcccgaattgcaaaatgtcgccttgccgtggcttggcatgggcaaaggaaggt 19161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 184
Target Start/End: Original strand, 33382 - 33551
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 113  Q
    |||||||||||||||||||| ||||||||||| || |||||||||| |||| ||||| | |||||||||||||||||||| |||||||||||| ||||||    
T  33382 ggacatcataaggacctccaccgagaaattttggcgaatttgcacgtgggattcgtttattgcgaatattttaagcgtcaatagccgaagaaatgaaaaa 33481  T
Q  114 gcaaaccccccgtttggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggt 184  Q
     |||| ||||  ||||||||| ||||||||||||| | ||||||| ||||||||||||||||  |||||||    
T  33482 acaaa-ccccaatttggctcccgaattgcaaaatgtcgccttgccgtggcttggcatgggcaaaggaaggt 33551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 38156 - 37987
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 113  Q
    |||||||||||||||||||| ||||||||||| || |||||||||| |||| ||||| | |||||||||||||||||||| |||||||||||| ||||||    
T  38156 ggacatcataaggacctccaccgagaaattttggcgaatttgcacgtgggattcgtttattgcgaatattttaagcgtcaatagccgaagaaatgaaaaa 38057  T
Q  114 gcaaaccccccgtttggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggt 184  Q
     |||| ||||  ||||||||| ||||||||||||| | ||||||| ||||||||||||||||  |||||||    
T  38056 acaaa-ccccaatttggctcccgaattgcaaaatgtcgccttgccgtggcttggcatgggcaaaggaaggt 37987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 28335 - 28259
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    |||||||||||||||||||| ||||||||||| ||   ||||| ||||||| ||||||| |||||||||||||||||    
T  28335 ggacatcataaggacctccaccgagaaattttggcgtttttgctcgcgggattcgttaagtgcgaatattttaagcg 28259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 37111 - 37035
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    |||||||||||||||||||| ||||||||||| ||   ||||| ||||||| ||||||| |||||||||||||||||    
T  37111 ggacatcataaggacctccaccgagaaattttggcgtttttgctcgcgggattcgttaagtgcgaatattttaagcg 37035  T

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Target: scaffold0152; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 18283 - 18207
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    |||||||||||||||||||| ||||||||||| ||   ||||| | ||||| ||||||| |||||||||||||||||    
T  18283 ggacatcataaggacctccaccgagaaattttggcgtttttgctcacgggattcgttaagtgcgaatattttaagcg 18207  T

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Target: scaffold0515 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 11760 - 11591
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 113  Q
    |||||||||||||||||||| ||||||||||| || |||||||||| |||| ||||| | |||||||||||||||||||| |||||||||||| ||||||    
T  11760 ggacatcataaggacctccaccgagaaattttggcgaatttgcacgtgggattcgtttattgcgaatattttaagcgtcaatagccgaagaaatgaaaaa 11661  T
Q  114 gcaaaccccccgtttggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggt 184  Q
     |||| ||||  ||||||||| ||||| ||||||| | ||||||| ||||||||||||||||  |||||||    
T  11660 acaaa-ccccaatttggctcccgaattccaaaatgtcgccttgccgtggcttggcatgggcaaaggaaggt 11591  T

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Target: scaffold0515; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 10715 - 10639
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    |||||||||||||||||||| ||||||||||| ||   ||||| ||||||| ||||||| |||||||||||||||||    
T  10715 ggacatcataaggacctccaccgagaaattttggcgtttttgctcgcgggattcgttaagtgcgaatattttaagcg 10639  T

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Target: chr6 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 14 - 184
Target Start/End: Original strand, 9477454 - 9477623
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaa 113  Q
    |||||||||||||| ||||| ||||||| ||| |||  |||||||| ||||   ||||| | |||||||||||||||||| |||||||||||| ||||||    
T  9477454 ggacatcataaggatctccatcgagaaactttggcatttttgcacgagggatgagttaattacgaatattttaagcgtcaatagccgaagaaatgaaaaa 9477553  T
Q  114 gcaaaccccccgtttggctccggaattgcaaaatgccaccttgccctggcttggcatgggcaggggaaggt 184  Q
     |||| ||||  ||||||||| ||||||||||||| | ||||||| ||||||||||||||||  |||||||    
T  9477554 acaaa-ccccaatttggctcccgaattgcaaaatgtcgccttgccgtggcttggcatgggcaaaggaaggt 9477623  T

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Target: chr5 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 15 - 173
Target Start/End: Original strand, 21098509 - 21098666
Alignment:
Q  15 gacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcgtcattagccgaagaaacgaaaaag 114  Q
    ||||||||||||||||||| ||||||||||| |||| |||||| | | || || |||| | |||||||||||||||||| |||||||| | | ||||||     
T  21098509 gacatcataaggacctccaccgagaaattttggcaattttgcatgagagattcattaattacgaatattttaagcgtcaatagccgaatatatgaaaaaa 21098608  T
Q  115 caaaccccccgtttggctccggaattgcaaaatgccaccttgccctggcttggcatggg 173  Q
    |||| |||  ||||| |||| ||||||||||||||| | | | | ||||||||||||||    
T  21098609 caaa-ccctagtttgcctcccgaattgcaaaatgccgcatcgtcgtggcttggcatggg 21098666  T

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Target: scaffold1084 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold1084
Description:

Target: scaffold1084; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 2955 - 2879
Alignment:
Q  14 ggacatcataaggacctccagcgagaaattttagcaaatttgcacgcgggaatcgttaactgcgaatattttaagcg 90  Q
    ||||||||||||||||| || ||||||||||| |||| |||||| |||| |||||| ||||| ||||||||||||||    
T  2955 ggacatcataaggaccttcaccgagaaattttggcaattttgcaggcggaaatcgtcaactgtgaatattttaagcg 2879  T

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