View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10481A_low_722 (Length: 206)
Name: NF10481A_low_722
Description: NF10481A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10481A_low_722 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 15 - 206
Target Start/End: Complemental strand, 43229833 - 43229642
Alignment:
| Q |
15 |
attatactaaatacagagtcatttttggtacagccaaacatattgataatgcttaccatacctctgattttgatccgagttcatgccttaactttttctt |
114 |
Q |
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| T |
43229833 |
attatactaaatacacagtcatttttggtacagccaaacagattgataatgcttaccatacctctgattttgatccgagttcatgccttaactttttctt |
43229734 |
T |
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| Q |
115 |
ttccccctcatcctttctatggataatctgatttaaaccatggttactggtttatgtttgatagaaaagatttgcaacatattttgtacata |
206 |
Q |
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| T |
43229733 |
ttccccctcatcctttctatggataatctgatttaaaccatggttactggtttatgtttgatagaaaagatttgcaacatattttgtacata |
43229642 |
T |
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