View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10485_low_13 (Length: 237)
Name: NF10485_low_13
Description: NF10485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10485_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 154; Significance: 8e-82; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 48 - 221
Target Start/End: Original strand, 10381470 - 10381643
Alignment:
| Q |
48 |
acgaacaatgtctggtacttctgtttcattgtaaaactccttcaaacaaattgagcattgttccattgaacaagcggtatctgcattgtcctccactttg |
147 |
Q |
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| T |
10381470 |
acgaacaatggctggtacttctgtttcattgtaaaactccttcaaacaaattgagcattgttccattgaacaagcggtatctgcattgtcgtccactttg |
10381569 |
T |
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| Q |
148 |
atcttctccaacgaattcataacattcgttacatcatgaaccgtaacattcatctccaacatacgacgttcttc |
221 |
Q |
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| T |
10381570 |
atcttctccaacgaattcataacattcgttacatcatgaaccgtaacactcatctccaatatatgacgttcttc |
10381643 |
T |
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